RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107745

Ensembl transcript IDs: ENST00000361114.10, ENST00000398761.8, ENST00000398763.8, ENST00000418483.6, ENST00000476605.7, ENST00000489666.2, ENST00000603011.5, ENST00000604025.1, ENST00000604238.2, ENST00000604529.1, ENST00000635239.1, ENST00000642044.1

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTGGTCTaGGAGCTCCACTTTAGCCACTGTCCTGGCCACCTGCTGCATGGT +
Preference number: 1 (lower is better)
Translates to: AITVKECKHHITHVV*ELHFSHCPGHLLHG
Trigger: ACCATGCAGCAGGTGGCCAGGACAGTGGCTAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR CCA 90 bp CCATTGCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTaGTCTGAGAGCTCCACTTTAGCCACTGTCCTGGCCACCTGCTGC +
Preference number: 1 (lower is better)
Translates to: PLPSQSKSANTTSHT*SESSTLATVLATCC
Trigger: GCAGCAGGTGGCCAGGACAGTGGCTAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR GCA 90 bp AAAGCGAAGTCCCAGGCAGTTTCCTGTGCACATTTCCACATGGCCTaGATGAGGCGAGTGAAACCCATGTCTTTGGGCTTTTCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: KAKSQAVSCAHFHMA*MRRVKPMSLGFSRP
Trigger: AGGCCTGGAAAAGCCCAAAGACATGGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATGTGCACAGGAAACTGCCTGGGACTTCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR GCA 90 bp GGGAGTGCACAGAGCCATGAAGCAACTACTTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCTTG +
Preference number: 1 (lower is better)
Translates to: GSAQSHEATTLNSES*CVPTEHAAFLEQAL
Trigger: CAAGGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR CCA 90 bp GAACATGAGCTCAATCACTATTGCTCACTAAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCTGCGAGGAAGAAAAGGGAGTGCACA +
Preference number: 1 (lower is better)
Translates to: EHELNHYCSLSTGSH*SHLREAARKKRECT
Trigger: TGTGCACTCCCTTTTCTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR GCA 90 bp GTGAAACCCATGTCTTTGGGCTTTTCCAGGCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAATTCCTTATTGCTCAGTTCGCCATTG +
Preference number: 1 (lower is better)
Translates to: VKPMSLGFSRPLISR*FMMETNSLLLSSPL
Trigger: CAATGGCGAACTGAGCAATAAGGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LEPSQGLTQILPGAQASHQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR CAA 90 bp TCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: SCCVPTEHAAFLEQA*EPSQGLTQILPGAQ
Trigger: CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGTGGCCACCTGCTGCATaGTCACTTAAGCTTCTGACT +
Preference number: 2 (lower is better)
Translates to: EQALEPSQGLTQILPGAQWPPAA*SLKLLT
Trigger: AGTCAGAAGCTTAAGTGACCATGCAGCAGGTGGCCA...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR GCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LEPSQGLTQILPGAQASHDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCAT +
Preference number: 2 (lower is better)
Translates to: LEPSQGLTQILPGAQASHHTSVG*LGHPHH
Trigger: ATGATGAGGATGACCTAGGCACCCTACGCTAGTGTG...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LEPSQGLTQILPGAQASHYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR TCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR TCA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTTGGCAGGTGTGTGGATaGTTCCCTGAATTCTTTATC +
Preference number: 2 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPWQVCG*FPEFFI
Trigger: GATAAAGAATTCAGGGAACCATCCACACACCTGCCA...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR CAA 90 bp GCACATTTCCACATGGCCTGCATGAGGCGAGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATGATGGAA +
Preference number: 2 (lower is better)
Translates to: AHFHMACMRRVKPMS*GFSRPLISRCFMME
Trigger: TTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR TCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp GGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GGAVEADKCLSFTDLFMFQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...AAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 2 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKSTGSH*SHLREA
Trigger: AGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCT...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR TCA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: CSLSTGSHWSHLREAARKIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR TCA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 2 (lower is better)
Translates to: CSLSTGSHWSHLREAARKECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR GCA 90 bp GCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGAAAAGGGAGTCAGGGCACAGCCTTCTaGAATTGTCTTGATATTTCA +
Preference number: 2 (lower is better)
Translates to: AQGHTGVILGRLRGRKGSQGTAF*NCLDIS
Trigger: TGAAATATCAAGACAATTGCAGAAGGCTGTGCCCTG...ACTCCCTTTTCTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR CCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: ACQISSLLVALKHQQEGSYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp GCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGAAAAGGGAGTGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AQGHTGVILGRLRGRKGSVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...ACTCCCTTTTCTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR CCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR TCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCTCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: NSESCCVPTEHAAFLEQASQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TTCCTGTGCACATTTCCACATGGCCTGCATGAGGCGAGTGAAACCCATGTCTTTACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 2 (lower is better)
Translates to: FLCTFPHGLHEASETHVFTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...AAAGACATGGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATGTGCACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR TCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp GAGCTCAATCACTATTGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: ELNHYCSLSTGSHWSHLRSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...CCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR CAA 90 bp GTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTaGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: VEADKCLSFTDLFMF*RTYGDTHWAESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR CAA 90 bp AGTGAAACCCATGTCTTTGGGCTTTTCCAGGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAATTCCTTATTGCTCAGTTCGCCATT +
Preference number: 2 (lower is better)
Translates to: SETHVFGLFQASHQP*LHDGNKFLIAQFAI
Trigger: AATGGCGAACTGAGCAATAAGGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR CCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: TLNSESCCVPTEHAAFLESPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR CAA 90 bp ATGGGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTaGTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: MGGAVEADKCLSFTD*FMFLRTYGDTHWAE
Trigger: TTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR GCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 2 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR GCA 90 bp AATGGCACTTGCAGGGAACATGAGCTCAATCACTATTGCTCACTAAGCACAGGGAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 2 (lower is better)
Translates to: NGTCREHELNHYCSLSTGKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...CCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTGCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR TCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQNYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR TCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 2 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR GCA 72 bp GGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGG +
Preference number: 3 (lower is better)
Translates to: GDYFQKQQHKGL*RDSAEGVQGTG
Trigger: CCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 3 (lower is better)
Translates to: EPSQGLTQILPGAQASHTGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: CSLSTGSHWSHLREAARKVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR TCA 72 bp GTCAAAGAGTGCAAACACCACATCACACACGTGGTCTaGGAGCTCCACTTTAGCCACTGTCCTGGCCACCTG +
Preference number: 3 (lower is better)
Translates to: VKECKHHITHVV*ELHFSHCPGHL
Trigger: CAGGTGGCCAGGACAGTGGCTAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR GCA 72 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCATTGTTTATCATCACAG +
Preference number: 3 (lower is better)
Translates to: LPGAQASHTSVG*LGHPHHCLSSQ
Trigger: CTGTGATGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR GCA 72 bp TCCCAGGCAGTTTCCTGTGCACATTTCCACATGGCCTaGATGAGGCGAGTGAAACCCATGTCTTTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: SQAVSCAHFHMA*MRRVKPMSLGF
Trigger: AAAGCCCAAAGACATGGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATGTGCACAGGAAACTGCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR CCA 72 bp TCACAGTCAAAGAGTGCAAACACCACATCACACACGTaGTCTGAGAGCTCCACTTTAGCCACTGTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: SQSKSANTTSHT*SESSTLATVLA
Trigger: GGCCAGGACAGTGGCTAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR CAA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: NSESCCVPTEHAAFLEQALWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 3 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 3 (lower is better)
Translates to: EPSQGLTQILPGAQASHTRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 3 (lower is better)
Translates to: LEPSQGLTQILPGAQASHRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 3 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR CCA 72 bp CTCAATCACTATTGCTCACTAAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCTGCGAGGAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: LNHYCSLSTGSH*SHLREAARKKR
Trigger: CCTTTTCTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR CAA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TTGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATGATGGAAACAAATTCCTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 3 (lower is better)
Translates to: LGFSRPLISRCFMMETNSLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...GGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR CAA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: ACQISSLLVALKHQQEGSHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR GCA 72 bp AATGGCACTTGCAGGGAACATGAGCTCAATCACTATTaGTCACTAAGCACAGGGTCACACTGGAGTCATCTT +
Preference number: 3 (lower is better)
Translates to: NGTCREHELNHY*SLSTGSHWSHL
Trigger: AAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR-3UTR CAA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 3 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR GCA 72 bp ATGTCTTTGGGCTTTTCCAGGCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAATTCCTTATTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: MSLGFSRPLISR*FMMETNSLLLS
Trigger: ACTGAGCAATAAGGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
3UTR-3UTR CAA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 3 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
3UTR-3UTR CAA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATACATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSIHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGTGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GETDRVLRSSREEGGLLPALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGAGTCTTCGCCGGATCTaGATGGGCTGTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRSLRRI*MGCDPP
Trigger: TGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGSTGSH*SHLREA
Trigger: AGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR TCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGCTCATCTTCTCCCCATaGAGATGGTGCCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGLIFSP*RWCPFL
Trigger: AAGGAAAGGGCACCATCTTCATGGGGAGAAGATGAG...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR GCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGCRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGCATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSAQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWCRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRTVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGCATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGGACTCTCCTAGCCGCTaGGCCTGTCGGGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGDSPSR*ACRDRG
Trigger: TCCACGATCCCGACAGGCCCAGCGGCTAGGAGAGTC...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS-3UTR TCA 90 bp CTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGATCTGGATGGGCTGTaGTCCTCCATGGTACCATCG +
Preference number: 4 (lower is better)
Translates to: LPEAAAQRALPRLCGGGPDLDGL*SSMVPS
Trigger: CGATGGTACCATGGAGGATCACAGCCCATCCAGATC...TGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGATATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTACTTGCAGTTACTaGAGATGCTCCCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWSTCSY*RCSQES
Trigger: GCTTTCCTGGGAGCATCTGCAGTAACTGCAAGTACT...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVECRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGATGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGTGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVECGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVESMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRSQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGGAGCTCAATCACTATTaGTCACTAAGCACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWELNHY*SLSTGS
Trigger: TGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTTGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTGGCAGGTGTGTGGATaGTTCCCTGAATTCTTTATC +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRWQVCG*FPEFFI
Trigger: GATAAAGAATTCAGGGAACCATCCACACACCTGCCA...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGATCTGGATGGGCTGTaGTCCTCCATGGTACCATCG +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHDLDGL*SSMVPS
Trigger: CGATGGTACCATGGAGGATCACAGCCCATCCAGATC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWREENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGTGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGCCSLR*NSRKFL
Trigger: CAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCA...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRCCSLR*NSRKFL
Trigger: CAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCA...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWCCSLR*NSRKFL
Trigger: CAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTTGCTGTGTTCCCACTaGGCATGCTGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRLLCSH*ACCLPR
Trigger: TCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAA...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGACATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGCATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: RGTTSRSSSTKGSAETLRHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...CCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EQALEPSQGLTQILPGAQDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: EQALEPSQGLTQILPGAQHTSVG*LGHPHH
Trigger: ATGATGAGGATGACCTAGGCACCCTACGCTAGTGTG...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGAGTCTTCGCCGGATCTaGATGGGCTGTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLSLRRI*MGCDPP
Trigger: TGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCCTTCTTTTTCTCTTCTaGGTGAGGGGCAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGLLFLF*VRGKIC
Trigger: GCAGATCTTGCCCCTCACCCAGAAGAGAAAAAGAAG...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SREEGGLLPEAAAQRALPPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...CGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGTTSRSSSTKGSAETLRHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...CCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCACACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GETDRVLRSSREEGGLLPHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGSTGSH*SHLREA
Trigger: AGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCT...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAGACAGGGAACTTTaGGGATGTTTATTGCAAATG +
Preference number: 4 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRGDREL*GCLLQM
Trigger: CATTTGCAATAAACATCCCCAAAGTTCCCTGTCTCC...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS-3UTR TCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCGATCTGGATGGGCTGTaGTCCTCCATGGTACCATCG +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSDLDGL*SSMVPS
Trigger: CGATGGTACCATGGAGGATCACAGCCCATCCAGATC...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SREEGGLLPEAAAQRALPKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...CGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTTTGCTGTGTTCCCACTaGGCATGCTGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLLLCSH*ACCLPR
Trigger: TCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAA...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGACATGGTGGAGATTCTaGATGGGCCCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGTWWRF*MGPLPQ
Trigger: TTGTGGAAGAGGGCCCATGCAGAATCTCCACCATGT...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGAACATGGTGGAGATTCTaGATGGGCCCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRTWWRF*MGPLPQ
Trigger: TTGTGGAAGAGGGCCCATGCAGAATCTCCACCATGT...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGCRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSATVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGGCTCTGCCGAGACTCTaGGGAGGGGGTCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKALPRL*GGGPGY
Trigger: GTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGC...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACAGGGCACAGCCTTCTaGAATTGTCTTGATATTTCA +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGQGTAF*NCLDIS
Trigger: TGAAATATCAAGACAATTGCAGAAGGCTGTGCCCTG...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGCTGTGATCCTCCATaGTACCATCGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCGCDPP*YHREPT
Trigger: TGTGGGTTCTCGATGGTACCATGGAGGATCACAGCC...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGGCTGTGATCCTCCATaGTACCATCGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHGCDPP*YHREPT
Trigger: TGTGGGTTCTCGATGGTACCATGGAGGATCACAGCC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGTGGAGATTCTGCATaGGCCCTCTTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRGGDSA*ALFHKR
Trigger: TCTTTTGTGGAAGAGGGCCCATGCAGAATCTCCACC...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTGGTGGAGATTCTGCATaGGCCCTCTTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASGGDSA*ALFHKR
Trigger: TCTTTTGTGGAAGAGGGCCCATGCAGAATCTCCACC...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: GDYFQKQQHKGLCRDSAEVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...CTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSAPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGTTSRSSSTKGSAETLRPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...CCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: SREEGGLLPEAAAQRALPSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGATATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EQALEPSQGLTQILPGAQKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGGGCCTGTCGGGATCGTaGAGACAGGCGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWGLSGS*RQACGR
Trigger: CCTCCCACACGCCTGTCTCCACGATCCCGACAGGCC...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398761.8
3UTR CAA 72 bp GTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTAACACAGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VPTEHAAFLEQA*EPSQGLTQILP
Trigger: AGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGATCTGGATGGGCTGTaGTCCTCCATGGTACCATCG +
Preference number: 4 (lower is better)
Translates to: NLWGYSLGRIRAQQNTGTDLDGL*SSMVPS
Trigger: CGATGGTACCATGGAGGATCACAGCCCATCCAGATC...CGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCATTTTTCTCTTCTGGGTaGGGGGCAAGATCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAFFSSG*GARSAV
Trigger: GACTGCAGATCTTGCCCCTCACCCAGAAGAGAAAAA...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGTATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGTATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTTATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGCACTTGCAGGGAACATaGGCTCAATCACTATTGCTC +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGHLQGT*AQSLLL
Trigger: GAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTG...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTTGCAGTTACTGCAGATaGTCCCAGGAAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLCSYCR*SQESHH
Trigger: ATGGTGGCTTTCCTGGGAGCATCTGCAGTAACTGCA...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGCACTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGHFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGTG...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCTVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: PEVIPGGRGTTSRSSSTKTVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...CTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTACATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAADLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SSREEGGLLPEAAAQRALHTSVG*LGHPHH
Trigger: ATGATGAGGATGACCTAGGCACCCTACGCTAGTGTG...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGTGGAGATTCTGCATaGGCCCTCTTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCGGDSA*ALFHKR
Trigger: TCTTTTGTGGAAGAGGGCCCATGCAGAATCTCCACC...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCTGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSAWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSATTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSREEGGLLPEAAAQRALCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCATCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GETDRVLRSSREEGGLLPSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGATCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCAGCACAGGGTCACACTaGAGTCATCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSSTGSH*SHLREA
Trigger: AGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCT...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
3UTR CAA 72 bp CACATGGCCTGCATGAGGCGAGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HMACMRRVKPMS*GFSRPLISRCF
Trigger: GAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCACTCGCCTCATGCAGGCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR TCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGAAAAGGGAGTTTGCTGTGTTCCCACTaGGCATGCTGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: AQGHTGVILGRLRGRKGSLLCSH*ACCLPR
Trigger: TCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAA...ACTCCCTTTTCTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR TCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACCACTTGCAGGGAACATaGGCTCAATCACTATTGCTC +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHHLQGT*AQSLLL
Trigger: GAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTG...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGTGAGGGGCAAGATCTaGAGTCTTTTTCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGVRGKI*SLFLMV
Trigger: AACCATGAGAAAAAGACTGCAGATCTTGCCCCTCAC...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSCRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NLWGYSLGRIRAQQNTGTFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...CGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: LPEAAAQRALPRLCGGGPRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...TGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCAGAGGAAATGGCACTTaGAGGGAACATGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: IPGGRGTTSRSSSTKGSARGNGT*REHELN
Trigger: ATTGAGCTCATGTTCCCTGCAAGTGCCATTTCCTCT...GGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCGTTGTCTACACATGGTaGAGATTCTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSVVYTW*RFCMGP
Trigger: AGGGCCCATGCAGAATCTCCACCATGTGTAGACAAC...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCACTTCTTTTTCTCTTCTaGGTGAGGGGCAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAALLFLF*VRGKIC
Trigger: GCAGATCTTGCCCCTCACCCAGAAGAGAAAAAGAAG...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTAGATTTTGTCTGGCGTaGAGTAGGCTCGAATCCTAT +
Preference number: 4 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGRFCLA*SRLESY
Trigger: ATAGGATTCGAGCCTACTCCACGCCAGACAAAATCT...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGTGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: LRTYGDTHWAESEPSRTRWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATTGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCATGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PEVIPGGRGTTSRSSSTKKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...CTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGEENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSEENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRCCSLR*NSRKFL
Trigger: CAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCA...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGAGTACTTGCAGTTACTaGAGATGCTCCCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWSTCSY*RCSQES
Trigger: GCTTTCCTGGGAGCATCTGCAGTAACTGCAAGTACT...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGGTGAGGGGCAAGATCTaGAGTCTTTTTCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: SSREEGGLLPEAAAQRALVRGKI*SLFLMV
Trigger: AACCATGAGAAAAAGACTGCAGATCTTGCCCCTCAC...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATGTGAGGGGCAAGATCTaGAGTCTTTTTCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHVRGKI*SLFLMV
Trigger: AACCATGAGAAAAAGACTGCAGATCTTGCCCCTCAC...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGTGTAGGCAAGTAGCATaGCACCAAACTGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CSLSTGSHWSHLREAARKCRQVA*HQTASQ
Trigger: CTGAGAGGCAGTTTGGTGGCATGCTACTTGCCTACA...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: GETDRVLRSSREEGGLLPITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGCACAAAGGGCTCTaGCGAGACTCTGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQQHKGL*RDSAEG
Trigger: CCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTG...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EPSQGLTQILPGAQASHTSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGAAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATTCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHSQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGAGAGGAAATGGCACTTaGAGGGAACATGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SSREEGGLLPEAAAQRALRGNGT*REHELN
Trigger: ATTGAGCTCATGTTCCCTGCAAGTGCCATTTCCTCT...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGACAGACCCAAGTGTTCTaGTTGTTTTTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGQTQVF*LFFIGC
Trigger: ACACCCAATGAAAAACAACCAGAACACTTGGGTCTG...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGTGGCAGGTGTGTGGATaGTTCCCTGAATTCTTTATC +
Preference number: 4 (lower is better)
Translates to: SSREEGGLLPEAAAQRALWQVCG*FPEFFI
Trigger: GATAAAGAATTCAGGGAACCATCCACACACCTGCCA...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGATCACTTTTCTGTCTCTaGATCCAGAACGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGSLFCL*IQNVSS
Trigger: AGAAGAAACGTTCTGGATTCAGAGACAGAAAAGTGA...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGATCACTTTTCTGTCTCTaGATCCAGAACGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRSLFCL*IQNVSS
Trigger: AGAAGAAACGTTCTGGATTCAGAGACAGAAAAGTGA...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTTCACTTTTCTGTCTCTaGATCCAGAACGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASSLFCL*IQNVSS
Trigger: AGAAGAAACGTTCTGGATTCAGAGACAGAAAAGTGA...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PEVIPGGRGTTSRSSSTKEENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...CTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: LEPSQGLTQILPGAQASHEENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PEVIPGGRGTTSRSSSTKRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...CTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCATTTCAAAATTTCTCTaGGGAGCTTTAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSISKFL*GALGVS
Trigger: GGACACTCCTAAAGCTCCTCAGAGAAATTTTGAAAT...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418483.6
CDS-3UTR GCA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGCACTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: EQALEPSQGLTQILPGAQHFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGTG...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: EPSQGLTQILPGAQASHTPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCACCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTATCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVSQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTTCGCCGGATCTGGATaGGCTGTGATCCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKFAGSG*AVILHG
Trigger: ACCATGGAGGATCACAGCCCATCCAGATCCGGCGAA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGAGTCTTCGCCGGATCTaGATGGGCTGTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKSLRRI*MGCDPP
Trigger: TGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAAGATTTTGTCTGGCGTaGAGTAGGCTCGAATCCTAT +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVRFCLA*SRLESY
Trigger: ATAGGATTCGAGCCTACTCCACGCCAGACAAAATCT...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGACTGGTTGTTTTTCATTaGGTGTTATGGATCGCACAA +
Preference number: 4 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGLVVFH*VLWIAQ
Trigger: TTGTGCGATCCATAACACCCAATGAAAAACAACCAG...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCAGACCCAAGTGTTCTaGTTGTTTTTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLQTQVF*LFFIGC
Trigger: ACACCCAATGAAAAACAACCAGAACACTTGGGTCTG...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCATGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQGLTQILPGAQASHTSVIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGAAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: REEGGLLPEAAAQRALPRNYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: ALEPSQGLTQILPGAQASKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSLSTGSHWSHLREAARKSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGGGCTGTGATCCTCCATaGTACCATCGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKGCDPP*YHREPT
Trigger: TGTGGGTTCTCGATGGTACCATGGAGGATCACAGCC...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGAGTCTTCGCCGGATCTaGATGGGCTGTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRSLRRI*MGCDPP
Trigger: TGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGTCGCACAAAATCTTCTaGTGTCATAAACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLSHKIF*CHKHFC
Trigger: GCAGAAGTGTTTATGACACCAGAAGATTTTGTGCGA...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTTCGCACAAAATCTTCTaGTGTCATAAACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPSHKIF*CHKHFC
Trigger: GCAGAAGTGTTTATGACACCAGAAGATTTTGTGCGA...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGCTGACAAATGTCTGGCGGTCAGCTTCTTaGACTGCACCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: FFIHRMLEWVVLLRLTNVWRSAS*TAPHCR
Trigger: CCTACAGTGGGGTGCAGTCCAAGAAGCTGACCGCCA...GACATTTGTCAGCCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRTYGDTHWAESEPSRTRCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRTYGDTHWAESEPSRTRYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ACQISSLLVALKHQQEGSHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATGATGGAAACAAATTCCTTGCTGTGTTCCCACTaGGCATGCTGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LGFSRPLISRCFMMETNSLLCSH*ACCLPR
Trigger: TCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAA...GGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR GCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTGCAGTTACTGCAGATaGTCCCAGGAAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKCSYCR*SQESHH
Trigger: ATGGTGGCTTTCCTGGGAGCATCTGCAGTAACTGCA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTACATGGTGGAGATTCTaGATGGGCCCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: ACQISSLLVALKHQQEGSTWWRF*MGPLPQ
Trigger: TTGTGGAAGAGGGCCCATGCAGAATCTCCACCATGT...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGACATGGTGGAGATTCTaGATGGGCCCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKTWWRF*MGPLPQ
Trigger: TTGTGGAAGAGGGCCCATGCAGAATCTCCACCATGT...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NSESCCVPTEHAAFLEQASMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCACTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RGETDRVLRSSREEGGLLHFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGTG...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTTVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCACATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKHTSVG*LGHPHH
Trigger: ATGATGAGGATGACCTAGGCACCCTACGCTAGTGTG...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPLNSES*CVPTEH
Trigger: ATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLLNSES*CVPTEH
Trigger: ATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCAGGCTGTGATCCTCCATaGTACCATCGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSGCDPP*YHREPT
Trigger: TGTGGGTTCTCGATGGTACCATGGAGGATCACAGCC...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATGGTTCCCTGAATTCTTTAGTTGTCTACACATGGTaGAGATTCTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NWMLPRVGRCVDGSLNSLVVYTW*RFCMGP
Trigger: AGGGCCCATGCAGAATCTCCACCATGTGTAGACAAC...TAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCTCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: NSESCCVPTEHAAFLEQASEDFV*RGVGSN
Trigger: ATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGA...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCATTTCATTGGGTGTTATaGATCGCACAAAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAFHWVL*IAQNLL
Trigger: CAGAAGATTTTGTGCGATCCATAACACCCAATGAAA...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCTTTCATTGGGTGTTATaGATCGCACAAAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCFHWVL*IAQNLL
Trigger: CAGAAGATTTTGTGCGATCCATAACACCCAATGAAA...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATGGTTCCCTGAATTCTTTATATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NWMLPRVGRCVDGSLNSLYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...TAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TCGCCATTGCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTGGTCTTATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPLPSQSKSANTTSHTWSYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...AGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGCAATGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CCA 90 bp AACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLWGYSLGRIRAQQNTGTVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...CGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGTGGCCACCTGCTGCATaGTCACTTAAGCTTCTGACT +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTWPPAA*SLKLLT
Trigger: AGTCAGAAGCTTAAGTGACCATGCAGCAGGTGGCCA...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR TCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATGGTTCCCTGAATTCTTTACACTTGCAGGGAACATaGGCTCAATCACTATTGCTC +
Preference number: 4 (lower is better)
Translates to: NWMLPRVGRCVDGSLNSLHLQGT*AQSLLL
Trigger: GAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTG...TAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp GAGCTCAATCACTATTGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGTGCAGTTACTGCAGATaGTCCCAGGAAAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: ELNHYCSLSTGSHWSHLRCSYCR*SQESHH
Trigger: ATGGTGGCTTTCCTGGGAGCATCTGCAGTAACTGCA...CCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361114.10
ENST00000398761.8
CDS-3UTR GCA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCA +
Preference number: 4 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSTVLAT*CMVTLS
Trigger: TGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGT...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTYGDTHWAESEPSRTRSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSLNSES*CVPTEH
Trigger: ATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCAGGTGGAGATTCTGCATaGGCCCTCTTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSGGDSA*ALFHKR
Trigger: TCTTTTGTGGAAGAGGGCCCATGCAGAATCTCCACC...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGGTTGTCTACACATGGTaGAGATTCTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRVVYTW*RFCMGP
Trigger: AGGGCCCATGCAGAATCTCCACCATGTGTAGACAAC...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATGGTTCCCTGAATTCTTTACTTCTTTTTCTCTTCTaGGTGAGGGGCAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: NWMLPRVGRCVDGSLNSLLLFLF*VRGKIC
Trigger: GCAGATCTTGCCCCTCACCCAGAAGAGAAAAAGAAG...TAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTTCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: ACQISSLLVALKHQQEGSSEDFV*RGVGSN
Trigger: ATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGA...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCAGTTGGACGATCTCTGTaGCGCATACCCATACTGGTT +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSVGRSL*RIPILV
Trigger: AACCAGTATGGGTATGCGCCACAGAGATCGTCCAAC...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTTGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: ACQISSLLVALKHQQEGSWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GAGCTCAATCACTATTGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGTGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELNHYCSLSTGSHWSHLRCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...CCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCATGTGGGGTTACTGTTTaGGTAAAGCGAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSCGVTV*VKRSPR
Trigger: CCTGGGACTTCGCTTTACCCAAACAGTAACCCCACA...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCCCCTCTTGCAGTGTaGGGTTACTGTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKSPLAV*GYCLGK
Trigger: TTTACCCAAACAGTAACCCCACACTGCAAGAGGGGA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGCTGACAAATGTCCACAGGATGCTTGAATaGGTGGTGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FFIHRMLEWVVLLRLTNVHRMLE*VVLLRL
Trigger: CAGCCTCAACAGCACCACCCATTCAAGCATCCTGTG...GACATTTGTCAGCCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGAGGAAAATGTAGTCTaGAAAGGATATGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: LRTYGDTHWAESEPSRTREENVV*KGYEPT
Trigger: TGTGGGCTCATATCCTTTTCAGACTACATTTTCCTC...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATGATGGAAACAAATTCCAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LGFSRPLISRCFMMETNSKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...GGAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR TCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGTATCCACAGGATGCTTaGATGGGTGGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQYPQDA*MGGAVE
Trigger: CTCAACAGCACCACCCATTCAAGCATCCTGTGGATA...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTTTGCTGTGTTCCCACTaGGCATGCTGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVLLCSH*ACCLPR
Trigger: TCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAA...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRSMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCATTTCCACATGGCCTaGATGAGGCGAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEHFHMA*MRRVKP
Trigger: GGGTTTCACTCGCCTCATGCAGGCCATGTGGAAATG...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGATTTGAGAACTGGATaGTTCCCAGGGTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQDLRTG*FPGLAG
Trigger: ACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATC...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TCGCCATTGCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTGGTCTTCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPLPSQSKSANTTSHTWSSQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...AGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGCAATGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR GCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCACAGACTTCTTTCTaGCTGCCAGATATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKSQTSF*LPDIFP
Trigger: AGGGAAGATATCTGGCAGGCAGAAAGAAGTCTGTGA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCACACTAGCGTAGGGTaGCTAGGTCATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQHTSVG*LGHPHH
Trigger: ATGATGAGGATGACCTAGGCACCCTACGCTAGTGTG...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCATCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSSEDFV*RGVGSN
Trigger: ATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGA...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCAACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATAAACCGACAGAGTCCTaGGGTCATCCCGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINKPTES*GHPGRK
Trigger: CTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTT...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGGTCCTGGCCACCTGCTaGATGGTCACTTTATCAAGA +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEVLATC*MVTLSR
Trigger: TCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGAC...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AATGGCACTTGCAGGGAACATGAGCTCAATCACTATTGCTCACTAAGCACAGGGGAGCTCAATCACTATTaGTCACTAAGCACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NGTCREHELNHYCSLSTGELNHY*SLSTGS
Trigger: TGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC...CCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp CAGTGTGGGGTTACTGTTTGGGTAAAGCGAAGTCCCAGGCAGTTTCCTGTGCACTCCTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: QCGVTVWVKRSPRQFPVHSFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGGA...GTGCACAGGAAACTGCCTGGGACTTCGCTTTACCCAAACAGTAACCCCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGGTTGTCTACACATGGTaGAGATTCTGCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMVVYTW*RFCMGP
Trigger: AGGGCCCATGCAGAATCTCCACCATGTGTAGACAAC...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCTTCTTTTTCTCTTCTaGGTGAGGGGCAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQLLFLF*VRGKIC
Trigger: GCAGATCTTGCCCCTCACCCAGAAGAGAAAAAGAAG...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGAGATTTTGTCTGGCGTaGAGTAGGCTCGAATCCTAT +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRRFCLA*SRLESY
Trigger: ATAGGATTCGAGCCTACTCCACGCCAGACAAAATCT...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAGACCCAAGTGTTCTaGTTGTTTTTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ACQISSLLVALKHQQEGSQTQVF*LFFIGC
Trigger: ACACCCAATGAAAAACAACCAGAACACTTGGGTCTG...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCCATCCACAGGGTCATaGCGTTCAAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVPSTGS*RSNSSF
Trigger: GAAGCTTGAGTTTGAACGCCATGACCCTGTGGATGG...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGTGGCCACCTGCTGCATaGTCACTTTATCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQWPPAA*SLYQEM
Trigger: CATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCA...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp AATGGCACTTGCAGGGAACATGAGCTCAATCACTATTGCTCACTAAGCACAGGGTGGCAGGTGTGTGGATaGTTCCCTGAATTCTTTATC +
Preference number: 4 (lower is better)
Translates to: NGTCREHELNHYCSLSTGWQVCG*FPEFFI
Trigger: GATAAAGAATTCAGGGAACCATCCACACACCTGCCA...CCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR TCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGAGTCTGAAAAGGATATaGGCCCACATTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMSLKRI*AHILQG
Trigger: CCCTTGGAGAATGTGGGCTCATATCCTTTTCAGACT...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp AATGGCACTTGCAGGGAACATGAGCTCAATCACTATTGCTCACTAAGCACAGGGATAGCAAAAACGATTTaGGAACTGGATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NGTCREHELNHYCSLSTGIAKTI*ELDASQ
Trigger: CTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTAT...CCCTGTGCTTAGTGAGCAATAGTGATTGAGCTCATGTTCCCTGCAAGTGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR TCA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CTTGTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LVHVFENLWGYSLGRIRASMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...GGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCCACTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: NSESCCVPTEHAAFLEQAHFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGTG...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCAATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp CTTGTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCTCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: LVHVFENLWGYSLGRIRASEDFV*RGVGSN
Trigger: ATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGA...GGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGCTGGTTGTTTTTCATTaGGTGTTATGGATCGCACAA +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTLVVFH*VLWIAQ
Trigger: TTGTGCGATCCATAACACCCAATGAAAAACAACCAG...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGAAACGATTTGAGAACTaGATGCTTCCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEKRFEN*MLPRVG
Trigger: GCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTT...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCATCACTTTTCTGTCTCTaGATCCAGAACGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSSLFCL*IQNVSS
Trigger: AGAAGAAACGTTCTGGATTCAGAGACAGAAAAGTGA...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLWFGSE*CSEPVQ
Trigger: TTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCA...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKNYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWNYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLSMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPKCFLS*LCMAVS
Trigger: GCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTT...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGATCACAGTCAAAGAGTaGAAACACCACATCACACAC +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQITVKE*KHHITH
Trigger: GTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGAT...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTTCTTTATCCACAGGATaGTTGAATGGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTCGFKTPAGGKSRNVLVSLSTG*LNGWCC
Trigger: ACAGCACCACCCATTCAAGCATCCTGTGGATAAAGA...AACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGGAGCTCAATCACTATTaGTCACTAAGCACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMELNHY*SLSTGS
Trigger: TGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR GCA 90 bp GGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTAGAGGAAATGGCACTTaGAGGGAACATGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GGAVEADKCLSFTDLFMFRGNGT*REHELN
Trigger: ATTGAGCTCATGTTCCCTGCAAGTGCCATTTCCTCT...AAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGTTTCATTGGGTGTTATaGATCGCACAAAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWFHWVL*IAQNLL
Trigger: CAGAAGATTTTGTGCGATCCATAACACCCAATGAAA...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATGGTGTTGCCAGTAGTTaGACGATCTCTGTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINGVASS*TISVAH
Trigger: ATGCGCCACAGAGATCGTCCAACTACTGGCAACACC...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATATATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSIYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CTTGTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCTGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LVHVFENLWGYSLGRIRACCSLR*NSRKFL
Trigger: CAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCA...GGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAAGTTCTCCACCTCCTaGAATGTCAGACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSIKFSTS*NVRPFP
Trigger: AGGAAAGGGTCTGACATTTCAGGAGGTGGAGAACTT...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGGCTGACAAATGTCTaGGCTTTACAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PTCGFKTPAGGKSRNVLVRLTNV*ALQTCS
Trigger: TGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCT...AACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp CTTGTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: LVHVFENLWGYSLGRIRAECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...GGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSISMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCATTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPFLSCL*MAVSFL
Trigger: CAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAA...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp CCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTCCTCTCATCAGCCGTTaGTTCATGATGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: PTCGFKTPAGGKSRNVLVPLISR*FMMETN
Trigger: ATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGG...AACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GAGCTCAATCACTATTGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: ELNHYCSLSTGSHWSHLRLNSES*CVPTEH
Trigger: ATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA...CCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCAATAGTGATTGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGAGATTTTGTCTGGCGTaGAGTAGGCTCGAATCCTAT +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLRFCLA*SRLESY
Trigger: ATAGGATTCGAGCCTACTCCACGCCAGACAAAATCT...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCTGGTTGTTTTTCATTaGGTGTTATGGATCGCACAA +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQLVVFH*VLWIAQ
Trigger: TTGTGCGATCCATAACACCCAATGAAAAACAACCAG...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTCAGACCCAAGTGTTCTaGTTGTTTTTCATTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GGAVEADKCLSFTDLFMFQTQVF*LFFIGC
Trigger: ACACCCAATGAAAAACAACCAGAACACTTGGGTCTG...AAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTGTTTTTGAGAACCTATaGGGATACTCATTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGAVEADKCLSFTDLFMFVFENL*GYSLGR
Trigger: TCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAAC...AAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GTTCATGTTTTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGAAACAAATTCCTTATTaGTCAGTTCGCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VHVFENLWGYSLGRIRAQKQIPY*SVRHCH
Trigger: ATGGCAATGGCGAACTGAGCAATAAGGAATTTGTTT...CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAAAACATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGCTGGTTGTTTTTCATTaGGTGTTATGGATCGCACAA +
Preference number: 4 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMLVVFH*VLWIAQ
Trigger: TTGTGCGATCCATAACACCCAATGAAAAACAACCAG...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCATATGGGGATACTCATTaGGCAGAATCAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPYGDTH*AESEPS
Trigger: GCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATA...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLENYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATGTGAGGGGCAAGATCTaGAGTCTTTTTCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINVRGKI*SLFLMV
Trigger: AACCATGAGAAAAAGACTGCAGATCTTGCCCCTCAC...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAAGCATGCCACCAAACTaGCTCTCAGTAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPSMPPN*LSVILP
Trigger: TGGGAGAATTACTGAGAGGCAGTTTGGTGGCATGCT...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGTGGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTAAATTCTGAATCTTaGTGTGTTCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GGAVEADKCLSFTDLFMFLNSES*CVPTEH
Trigger: ATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA...AAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGTCGCACAAAATCTTCTaGTGTCATAAACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLSHKIF*CHKHFC
Trigger: GCAGAAGTGTTTATGACACCAGAAGATTTTGTGCGA...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp ACTTTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGTTTCATTGGGTGTTATaGATCGCACAAAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLNSESCCVPTEHAAFLEFHWVL*IAQNLL
Trigger: CAGAAGATTTTGTGCGATCCATAACACCCAATGAAA...CTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAACCACATCACACACGTaGTCTGAGAGCTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPTTSHT*SESSTL
Trigger: TAAAGTGGAGCTCTCAGACCACGTGTGTGATGTGGT...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGCACTTTATCAAGAGATaGTCCAGCCATATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLHFIKR*SSHMVK
Trigger: TTTTACCATATGGCTGGAGCATCTCTTGATAAAGTG...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS-3UTR GCA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATAGACTTCTTTCTGCCTaGCAGATATCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINRLLSA*QISSLL
Trigger: AAGTAGGGAAGATATCTGGCAGGCAGAAAGAAGTCT...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAGAGTGCACAGAGCCATaGAGCAACTACTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPECTEP*SNYFKF
Trigger: GAATTTAAAGTAGTTGCTTCATGGCTCTGTGCACTC...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR TCA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATAACTACTTTAAATTCTaGATCTTGCTGTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINNYFKF*ILLCSH
Trigger: GTGGGAACACAGCAAGATTCAGAATTTAAAGTAGTT...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS CCA 90 bp AACCTCCACCCCCTCCGCCCACTCTCACGTGACTCTCCTAGCCGCTaGGCCTGTCGGGATCGTGGAGACAGGCGTGTGGGAGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: NLHPLRPLSRDSPSR*ACRDRGDRRVGGAQ
Trigger: CTGTGCCCCTCCCACACGCCTGTCTCCACGATCCCGACAGGCCCAGCGGCTAGGAGAGTCACGTGAGAGTGGGCGGAGGGGGTGGAGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGCCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: KGLCRDSAEGVQGTGGGGPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...CCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGATCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTCTTTAGGAGTGTCCTaGAAGATCTCCTTGGCCCGT +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWSLGVS*KISLAR
Trigger: ACGGGCCAAGGAGATCTTCAAGGACACTCCTAAAGA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398763.8
CDS-3UTR CAA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGCTTTAGGAGTGTCCTaGAAGATCTCCTTGGCCCGT +
Preference number: 5 (lower is better)
Translates to: TKGSAETLRRGSRVLGVEALGVS*KISLAR
Trigger: ACGGGCCAAGGAGATCTTCAAGGACACTCCTAAAGC...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418483.6
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: ALEPSQGLTQILPGAQASGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 5 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGATTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 5 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 5 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGTCTGGTTGTTTTTCATaGGGTGTTATGGATCGCACA +
Preference number: 5 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGSGCFS*GVMDRT
Trigger: TGTGCGATCCATAACACCCAATGAAAAACAACCAGA...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCACCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: LPEAAAQRALPRLCGGGPPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...TGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: EQALEPSQGLTQILPGAQSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...CTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp ACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGACAAAAGACCAGTACTaGCAGTTACTGCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: TKGSAETLRRGSRVLGVETKDQY*QLLQML
Trigger: GAGCATCTGCAGTAACTGCAAGTACTGGTCTTTTGT...CTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAACAAAAGACCAGTACTaGCAGTTACTGCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGTKDQY*QLLQML
Trigger: GAGCATCTGCAGTAACTGCAAGTACTGGTCTTTTGT...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGCCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: RGTTSRSSSTKGSAETLRPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...CCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: LPEAAAQRALPRLCGGGPEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...TGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: SREEGGLLPEAAAQRALPEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...CGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: RQSPEVIPGGRGTTSRSSSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...GCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GETDRVLRSSREEGGLLPVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGAAGGGTAAAGAGGGGCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGRIRAQQNTGTGKGKEGLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...CCCCTCTTTACCCTTCCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QRALPRLCGGGPGYWGWRHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...CCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGAGGGGAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: KGSAETLRRGSRVLGVEGRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...CCCCTCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGATCTGGTTGTTTTTCATaGGGTGTTATGGATCGCACA +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGSGCFS*GVMDRT
Trigger: TGTGCGATCCATAACACCCAATGAAAAACAACCAGA...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGACCCAAGTGTTCTGGTaGTTTTTCATTGGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWTQVFW*FFIGCY
Trigger: ATAACACCCAATGAAAAACAACCAGAACACTTGGGT...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTCCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: EPSQGLTQILPGAQASHTPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: EGGLLPEAAAQRALPRLCSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...GCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: LEPSQGLTQILPGAQASHSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSREEGGLLPEAAAQRALVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSREEGGLLPEAAAQRALLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: AQRALPRLCGGGPGYWGWDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...CCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 5 (lower is better)
Translates to: CSLSTGSHWSHLREAARKFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CAA 90 bp CACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTCCAGGGTACTGGGGGTGGATCTCTGAGGAGCTTTTaGTTTCAACATGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: HKGLCRDSAEGVQGTGGGSLRSF*FQHALP
Trigger: AGGCAAAGCATGTTGAAACAAAAAGCTCCTCAGAGA...TCCACCCCCAGTACCCTGGACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398763.8
CDS-3UTR CAA 90 bp AGAGGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: RGETDRVLRSSREEGGLLHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...AAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSREEGGLLPEAAAQRALHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGCATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTCCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: EPSQGLTQILPGAQASHTEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...AGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGACGGGGGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: LWGYSLGRIRAQQNTGTGEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...CCCCGTCCCCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGGAAACCGACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GETDRVLRSSREEGGLLPRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...TGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTCGGTTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGAAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: REEGGLLPEAAAQRALPRRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: GLLPEAAAQRALPRLCGGLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...CCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGAGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: REEGGLLPEAAAQRALPRASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...TCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGGGTGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: LLPEAAAQRALPRLCGGGASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...ACCCCCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RKGDYFQKQQHKGLCRDSVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...AGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGCTATGGGGATACTCATaGGGCAGAATCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWLWGYS*GRIRAQ
Trigger: CTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAG...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS CCA 90 bp ATGCTCCCAGGAAAGCCACCATCATTAGTCTTCGCCGGATCTGGATaGGCTGTGATCCTCCATGGTACCATCGAGAACCCACAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: MLPGKPPSLVFAGSG*AVILHGTIENPQPV
Trigger: AACTGGCTGTGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACTAATGATGGTGGCTTTCCTGGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 90 bp ACCATCATTAGTCTTCGCCGGATCTGGATGGGCTGTGATCCTCCATaGTACCATCGAGAACCCACAGCCAGTTGCGTCCAAACACGAGCT +
Preference number: 5 (lower is better)
Translates to: TIISLRRIWMGCDPP*YHREPTASCVQTRA
Trigger: AGCTCGTGTTTGGACGCAACTGGCTGTGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACTAATGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603011.5
CDS-3UTR CAA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGACAAAAGACCAGTACTaGCAGTTACTGCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRTKDQY*QLLQML
Trigger: GAGCATCTGCAGTAACTGCAAGTACTGGTCTTTTGT...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGCATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: LPRAGLGAIPGTNTDPSWHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...CCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRGTTSRSSSTKGSAETLRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...CAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: NSESCCVPTEHAAFLEQAGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGGGATGCTTCCCAGGGTaGGCAGGTGTGTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: LRTYGDTHWAESEPSRTRGCFPG*AGVWMV
Trigger: AACCATCCACACACCTGCCAACCCTGGGAAGCATCC...CCGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCGCGTTTTATTATATATaGATCCAGACCCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: AGLGAIPGTNTDPSWGAGAFYYI*IQTQVF
Trigger: GAACACTTGGGTCTGGATCAATATATAATAAAACGC...GCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: CSLSTGSHWSHLREAARKEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
CDS-3UTR CAA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: GGLLPEAAAQRALPRLCGETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...TCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCGAGACTCTGCGGAGGGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: GTTSRSSSTKGSAETLRRETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...CCTCCGCAGAGTCTCGGCAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: SQGLTQILPGAQASHTSVASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...TACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: ALEPSQGLTQILPGAQASHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...AGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTTCCTAGAGCAGGCCTaGGAGCCATCCCAGGGACTA +
Preference number: 5 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKFLEQA*EPSQGL
Trigger: TAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS CCA 90 bp ACCATCATTAGTCTTCGCCGGATCTGGATGGGCTGTGATCCTCCATaGTACCATCGAGAACCCACAGCCAGTTCTGCCAAAGCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: TIISLRRIWMGCDPP*YHREPTASSAKAES
Trigger: ACTTTCTGCTTTGGCAGAACTGGCTGTGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACTAATGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: LEPSQGLTQILPGAQASHETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GACAGAGTCCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCACATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: DRVLRSSREEGGLLPEAAHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...TGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGGACTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CCTGAGGTCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PEVIPGGRGTTSRSSSTKHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...CTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGACCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp ATCCTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTATGTCACTTTTTAGGTaGTCTACACATGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: ILPGAQASHTSVGCLGHPMSLFR*STHGGD
Trigger: ATCTCCACCATGTGTAGACAACCTAAAAAGTGACAT...AGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTGGAGCCATCCCAGGGACTAACACAGATCCTTCCTGGGGCGCAGGCTTCTCACACCCAAGTGTTCTGGTaGTTTTTCATTGGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: LEPSQGLTQILPGAQASHTQVFW*FFIGCY
Trigger: ATAACACCCAATGAAAAACAACCAGAACACTTGGGT...GTGAGAAGCCTGCGCCCCAGGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCTTTGAAGTGCTTCTaGAGCTGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKSLKCF*SCLCMA
Trigger: CGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGA...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTTGAGAACCTATGGGGATACTCATTGGGCAGAATCAGAGCCCAGCAGAACACGGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FENLWGYSLGRIRAQQNTVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...CGTGTTCTGCTGGGCTCTGATTCTGCCCAATGAGTATCCCCATAGGTTCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: SSREEGGLLPEAAAQRALDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCTCACTAAGCACAGGGTCACACTGGAGTCATCTTAGGGAGGCTGCGAGGAAGTCTGGTTGTTTTTCATaGGGTGTTATGGATCGCACA +
Preference number: 5 (lower is better)
Translates to: CSLSTGSHWSHLREAARKSGCFS*GVMDRT
Trigger: TGTGCGATCCATAACACCCAATGAAAAACAACCAGA...CTTCCTCGCAGCCTCCCTAAGATGACTCCAGTGTGACCCTGTGCTTAGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361114.10
ENST00000398761.8
CDS-3UTR CAA 90 bp CTTCCTGGGGCGCAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATGCGTTTTATTATATATaGATCCAGACCCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LPGAQASHTSVGCLGHPHAFYYI*IQTQVF
Trigger: GAACACTTGGGTCTGGATCAATATATAATAAAACGC...ATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTGCGCCCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGGAACACAAGCCAGACTaGAGGGTGTTGCCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKEHKPD*RVLPVV
Trigger: AACTACTGGCAACACCCTCAAGTCTGGCTTGTGTTC...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: NSESCCVPTEHAAFLEQARPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCCTTCCTAGAGCAGGCCTTGGAGCCATCCCAGGGACTAACACAGATCCTTCCAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: CLPRAGLGAIPGTNTDPSRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...GGAAGGATCTGTGTTAGTCCCTGGGATGGCTCCAAGGCCTGCTCTAGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TCATCCCGGGAGGAAGGGGGACTACTTCCAGAAGCAGCAGCACAAAGGGCTCTGCCTTCTGCAATTGTCTaGATATTTCAAGTACTCATC +
Preference number: 5 (lower is better)
Translates to: SSREEGGLLPEAAAQRALPSAIV*IFQVLI
Trigger: GATGAGTACTTGAAATATCAAGACAATTGCAGAAGG...CAGAGCCCTTTGTGCTGCTGCTTCTGGAAGTAGTCCCCCTTCCTCCCGGGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CAA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCACATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTTGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATGATGGAAACAAATTCGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: FGLFQASHQPLLHDGNKFVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...GAATTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CAA 90 bp CAGGCTTCTCACACTAGCGTAGGGTGCCTAGGTCATCCTCATCATTGTTTATCATTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: QASHTSVGCLGHPHHCLSLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...TGATAAACAATGATGAGGATGACCTAGGCACCCTACGCTAGTGTGAGAAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: LPDIFPTCGFKTPAGGKSASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...TGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CATTGCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTGGTCTGAGAGCCTCTCATCAGCCGTaGCTTCATGATGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: HCHHSQRVQTPHHTRGLRASHQP*LHDGNK
Trigger: TTTGTTTCCATCATGAAGCAACGGCTGATGAGAGGC...TCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CAA 90 bp TTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGCTGACAAATGTCAGACCCTTTCCTTCTTaGAAGTGCTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FFIHRMLEWVVLLRLTNVRPFPS*KCFLSC
Trigger: GCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCT...GACATTTGTCAGCCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGGTGAAACCCATGTCTTaGGGCTTTTCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLVKPMS*GFSRPL
Trigger: GAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCAC...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp AGTGAAACCCATGTCTTTGGGCTTTTCCAGGCCTCTCATCAGCCGTTGCTTCATCATAGCAAAAACGATTaGAGAACTGGATGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SETHVFGLFQASHQPLLHHSKND*RTGCFP
Trigger: TGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG...ATGAAGCAACGGCTGATGAGAGGCCTGGAAAAGCCCAAAGACATGGGTTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CAA 90 bp AATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGGCCAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: NSESCCVPTEHAAFLEQARSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...GGCCTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTAAATTCTGAATCTTGCTGTGTTCCCACTGAGCATGCTGCCTTCCTAGAGCAGACAAAAGACCAGTACTaGCAGTTACTGCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: LNSESCCVPTEHAAFLEQTKDQY*QLLQML
Trigger: GAGCATCTGCAGTAACTGCAAGTACTGGTCTTTTGT...CTGCTCTAGGAAGGCAGCATGCTCAGTGGGAACACAGCAAGATTCAGAATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGTCTGGTTGTTTTTCATaGGGTGTTATGGATCGCACA +
Preference number: 5 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRSGCFS*GVMDRT
Trigger: TGTGCGATCCATAACACCCAATGAAAAACAACCAGA...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATACCAGACTTGAGGGTGTaGCCAGTAGTTGGACGATCT +
Preference number: 5 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSIPDLRV*PVVGRS
Trigger: AGATCGTCCAACTACTGGCAACACCCTCAAGTCTGG...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp ATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTGCTCAGTTCGCCATaGCCATCACAGTCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: ISSLLVALKHQQEGSQGMLLSSP*PSQSKS
Trigger: ACTCTTTGACTGTGATGGCAATGGCGAACTGAGCAA...CATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CATTGCCATCACAGTCAAAGAGTGCAAACACCACATCACACACGTGGTCTGAGAGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: HCHHSQRVQTPHHTRGLRETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...TCTCAGACCACGTGTGTGATGTGGTGTTTGCACTCTTTGACTGTGATGGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476605.7
CDS-3UTR CAA 90 bp TGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGGAAACAAATTCCTTATaGCTCAGTTCGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: WFPEFFIHRMLEWVVLLRETNSL*LSSPLP
Trigger: TGGCAATGGCGAACTGAGCAATAAGGAATTTGTTTC...CCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAGTGTGGGGTTACTGTTaGGGTAAAGCGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: CGFKTPAGGKSRNVLVSIVWGYC*GKAKSQ
Trigger: CTGGGACTTCGCTTTACCCAAACAGTAACCCCACAC...TATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp CATAGCAAAAACGATTTGAGAACTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: HSKNDLRTGCFPGLAGVWRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...CCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTAGGTCATCCTCATCATaGTTTATCATCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: ACQISSLLVALKHQQEGSRSSSS*FIITDF
Trigger: GAAGTCTGTGATGATAAACAATGATGAGGATGACCT...ACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TGCCTGCCAGATATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGGCGTTTTATTATATATaGATCCAGACCCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: CLPDIFPTCGFKTPAGGKAFYYI*IQTQVF
Trigger: GAACACTTGGGTCTGGATCAATATATAATAAAACGC...CTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGATATCTGGCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTCTTTATCCACAGGATGCTTGAATGGGTGGTGCTGTTGAGGCTGACAAATGTCACCCAAGTGTTCTGGTaGTTTTTCATTGGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: FFIHRMLEWVVLLRLTNVTQVFW*FFIGCY
Trigger: ATAACACCCAATGAAAAACAACCAGAACACTTGGGT...GACATTTGTCAGCCTCAACAGCACCACCCATTCAAGCATCCTGTGGATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS TCA 90 bp TGGCGTTCAAACTCAAGCTTCAGAACATCATGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTGATTGTCAGCTTTCCCTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: WRSNSSFRTSCCSLR*NSRKFLIVSFPFRS
Trigger: TGATCTGAAGGGAAAGCTGACAATCAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCATGATGTTCTGAAGCTTGAGTTTGAACGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 90 bp CTCACTGATGACTTTCAAGGTGGCAAAATATCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAATCCTATTCTCATATTCCATCACTTT +
Preference number: 5 (lower is better)
Translates to: LTDDFQGGKISEDFV*RGVGSNPILIFHHF
Trigger: AAAGTGATGGAATATGAGAATAGGATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGATATTTTGCCACCTTGAAAGTCATCAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp ATCTTCCCTACTTGTGGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTACCCAAGTGTTCTGGTaGTTTTTCATTGGGTGTTAT +
Preference number: 5 (lower is better)
Translates to: IFPTCGFKTPAGGKSRNVTQVFW*FFIGCY
Trigger: ATAACACCCAATGAAAAACAACCAGAACACTTGGGT...AACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCCACAAGTAGGGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCACATACCCATACTGGTTaGGGAGCGAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPHTHTG*GANDAL
Trigger: CAGAGCATCATTCGCTCCCAAACCAGTATGGGTATG...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGAGGAGACAGGGAACTTaGGGGATGTTTATTGCAAAT +
Preference number: 5 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLRRQGT*GMFIAN
Trigger: ATTTGCAATAAACATCCCCAAAGTTCCCTGTCTCCT...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS CCA 90 bp TTCTGGTTGTTTTTCATTGGGTGTTATGGATCGCACAAAATCTTCTaGTGTCATAAACACTTCTGCTTCACCAGGCTCACTGATGACTTT +
Preference number: 5 (lower is better)
Translates to: FWLFFIGCYGSHKIF*CHKHFCFTRLTDDF
Trigger: AAAGTCATCAGTGAGCCTGGTGAAGCAGAAGTGTTTATGACACCAGAAGATTTTGTGCGATCCATAACACCCAATGAAAAACAACCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGTGCTGTTGAGGCTGACAAATGTCTGAGCTTTACAGACTTGTTCATGTTTTTGGCGTTTTATTATATATaGATCCAGACCCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GAVEADKCLSFTDLFMFLAFYYI*IQTQVF
Trigger: GAACACTTGGGTCTGGATCAATATATAATAAAACGC...CAAAAACATGAACAAGTCTGTAAAGCTCAGACATTTGTCAGCCTCAACAGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp GGCTTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATGCGTTTTATTATATATaGATCCAGACCCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GFKTPAGGKSRNVLVSINAFYYI*IQTQVF
Trigger: GAACACTTGGGTCTGGATCAATATATAATAAAACGC...ATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS-3UTR CAA 90 bp TTTAAAACACCAGCAGGAGGGAAGTCAAGGAATGTTCTTGTTAGTATAAATCCAGACTTGTTCATGTTTTaGAGAACCTATGGGGATACT +
Preference number: 5 (lower is better)
Translates to: FKTPAGGKSRNVLVSINPDLFMF*RTYGDT
Trigger: AGTATCCCCATAGGTTCTCAAAAACATGAACAAGTC...TGGATTTATACTAACAAGAACATTCCTTGACTTCCCTCCTGCTGGTGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS TCA 90 bp ATTCTTCCATATCTACTTCTCCATCTCCATTCAAATCAAACATCTTaGAGGCAATTTCAAAATTTCTCTGAGGAGTGGAAAGAACAGTTG +
Preference number: 5 (lower is better)
Translates to: ILPYLLLHLHSNQTS*RQFQNFSEEWKEQL
Trigger: CAACTGTTCTTTCCACTCCTCAGAGAAATTTTGAAATTGCCTTCAAGATGTTTGATTTGAATGGAGATGGAGAAGTAGATATGGAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000476605.7
ENST00000603011.5
ENST00000604238.2
ENST00000604529.1
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp CCCCTCCGCCCACTCTCACGTGACTCTCCTAGCCGCTaGGCCTGTCGGGATCGTGGAGACAGGCGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: PLRPLSRDSPSR*ACRDRGDRRVG
Trigger: TCCCACACGCCTGTCTCCACGATCCCGACAGGCCCAGCGGCTAGGAGAGTCACGTGAGAGTGGGCGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS CCA 72 bp AGTCTTCGCCGGATCTGGATGGGCTGTGATCCTCCATaGTACCATCGAGAACCCACAGCCAGTTGCGTCCAA +
Preference number: 6 (lower is better)
Translates to: SLRRIWMGCDPP*YHREPTASCVQ
Trigger: TTGGACGCAACTGGCTGTGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603011.5
CDS GCA 72 bp CCCTTTCCTTCTTTGAAGTGCTTCTTGAGCTGCCTCTaGATGGCGGTCAGCTTCTTGGACTGCACCCCACTG +
Preference number: 6 (lower is better)
Translates to: PFPSLKCFLSCL*MAVSFLDCTPL
Trigger: CAGTGGGGTGCAGTCCAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp AGTCTTCGCCGGATCTGGATGGGCTGTGATCCTCCATaGTACCATCGAGAACCCACAGCCAGTTCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: SLRRIWMGCDPP*YHREPTASSAK
Trigger: TTTGGCAGAACTGGCTGTGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS GCA 72 bp GTCAGACCCTTTCCTTCTTTGAAGTGCTTCTTGAGCTaGCTCTGCATGGCGGTCAGCTTCTTGGACTGCACC +
Preference number: 6 (lower is better)
Translates to: VRPFPSLKCFLS*LCMAVSFLDCT
Trigger: GGTGCAGTCCAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGAAGGAAAGGGTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000635239.1
ENST00000642044.1
CDS GCA 72 bp TCTGAGAGCTCCACTTTAGCCACTGTCCTGGCCACCTaGTGCATGGTCACTTTATCAAGAGATGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: SESSTLATVLAT*CMVTLSRDAPA
Trigger: GGCTGGAGCATCTCTTGATAAAGTGACCATGCAGCAGGTGGCCAGGACAGTGGCTAAAGTGGAGCTCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp GGAAAGCCACCATCATTAGTCTTCGCCGGATCTGGATaGGCTGTGATCCTCCATGGTACCATCGAGAACCCA +
Preference number: 6 (lower is better)
Translates to: GKPPSLVFAGSG*AVILHGTIENP
Trigger: TGGGTTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACTAATGATGGTGGCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp CCCAGGAAAGCCACCATCATTAGTCTTCGCCGGATCTaGATGGGCTGTGATCCTCCATGGTACCATCGAGAA +
Preference number: 6 (lower is better)
Translates to: PRKATIISLRRI*MGCDPPWYHRE
Trigger: TTCTCGATGGTACCATGGAGGATCACAGCCCATCCAGATCCGGCGAAGACTAATGATGGTGGCTTTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp GACTTGAGGGTGTTGCCAGTAGTTGGACGATCTCTGTaGCGCATACCCATACTGGTTTGGGAGCGAATGATG +
Preference number: 6 (lower is better)
Translates to: DLRVLPVVGRSL*RIPILVWERMM
Trigger: CATCATTCGCTCCCAAACCAGTATGGGTATGCGCCACAGAGATCGTCCAACTACTGGCAACACCCTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 72 bp ATTCTGCATGGGCCCTCTTCCACAAAAGACCAGTACTaGCAGTTACTGCAGATGCTCCCAGGAAAGCCACCA +
Preference number: 6 (lower is better)
Translates to: ILHGPSSTKDQY*QLLQMLPGKPP
Trigger: TGGTGGCTTTCCTGGGAGCATCTGCAGTAACTGCAAGTACTGGTCTTTTGTGGAAGAGGGCCCATGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 72 bp AGTTGGACGATCTCTGTGGCGCATACCCATACTGGTTaGGGAGCGAATGATGCTCTGAACCTGTTCAAATTC +
Preference number: 6 (lower is better)
Translates to: SWTISVAHTHTG*GANDALNLFKF
Trigger: GAATTTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCAGTATGGGTATGCGCCACAGAGATCGTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 90 bp GTTGCCAGTAGTTGGACGATCTCTGTGGCGCATACCCATACTGGTTaGGGAGCGAATGATGCTCTGAACCTGTTCAAATTCTTCCATATC +
Preference number: 6 (lower is better)
Translates to: VASSWTISVAHTHTG*GANDALNLFKFFHI
Trigger: GATATGGAAGAATTTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCAGTATGGGTATGCGCCACAGAGATCGTCCAACTACTGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS TCA 72 bp CTCTGTGGCGCATACCCATACTGGTTTGGGAGCGAATaGTGCTCTGAACCTGTTCAAATTCTTCCATATCTA +
Preference number: 6 (lower is better)
Translates to: LCGAYPYWFGSE*CSEPVQILPYL
Trigger: TAGATATGGAAGAATTTGAACAGGTTCAGAGCATCATTCGCTCCCAAACCAGTATGGGTATGCGCCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 72 bp TTATTCTTCCCTTTATCACCGATGTCACTTTTTAGGTaGTCTACACATGGTGGAGATTCTGCATGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LFFPLSPMSLFR*STHGGDSAWAL
Trigger: GAGGGCCCATGCAGAATCTCCACCATGTGTAGACAACCTAAAAAGTGACATCGGTGATAAAGGGAAGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 90 bp CCTTCATCTTTATTCTTCCCTTTATCACCGATGTCACTTTTTAGGTaGTCTACACATGGTGGAGATTCTGCATGGGCCCTCTTCCACAAA +
Preference number: 6 (lower is better)
Translates to: PSSLFFPLSPMSLFR*STHGGDSAWALFHK
Trigger: TTTGTGGAAGAGGGCCCATGCAGAATCTCCACCATGTGTAGACAACCTAAAAAGTGACATCGGTGATAAAGGGAAGAATAAAGATGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604025.1
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp TCAAGGTGGCAAAATATCGGAAGATTTTGTCTGGCGTaGAGTAGGCTCGAATCCTATTCTCATATTCCATCA +
Preference number: 6 (lower is better)
Translates to: SRWQNIGRFCLA*SRLESYSHIPS
Trigger: TGATGGAATATGAGAATAGGATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGATATTTTGCCACCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp GACTTTCAAGGTGGCAAAATATCGGAAGATTTTGTCTaGCGTGGAGTAGGCTCGAATCCTATTCTCATATTC +
Preference number: 6 (lower is better)
Translates to: DFQGGKISEDFV*RGVGSNPILIF
Trigger: GAATATGAGAATAGGATTCGAGCCTACTCCACGCCAGACAAAATCTTCCGATATTTTGCCACCTTGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CAA 90 bp AACCCTCTGCCATTGCACATATACAGGCCCACTTCAGAACAGGTTTaGTTTCTTAGTTTGAAAAACAATCCACCTTCTCCTACAGAGGTA +
Preference number: 6 (lower is better)
Translates to: NPLPLHIYRPTSEQV*FLSLKNNPPSPTEV
Trigger: TACCTCTGTAGGAGAAGGTGGATTGTTTTTCAAACTAAGAAACAAAACCTGTTCTGAAGTGGGCCTGTATATGTGCAATGGCAGAGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604529.1
CDS TCA 72 bp CATGCTGCAGTTTACGCTGAAATTCGAGGAAGTTTTTaGTTGTCAGCTTTCCCTTCAGATCAGCTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: HAAVYAEIRGSF*LSAFPSDQLQK
Trigger: TTTTTGGAGCTGATCTGAAGGGAAAGCTGACAATCAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS TCA 72 bp AACTCAAGCTTCAGAACATCATGCTGCAGTTTACGCTaGAATTCGAGGAAGTTTTTGATTGTCAGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: NSSFRTSCCSLR*NSRKFLIVSFP
Trigger: GGGAAAGCTGACAATCAAAAACTTCCTCGAATTTCAGCGTAAACTGCAGCATGATGTTCTGAAGCTTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000398763.8
ENST00000418483.6
ENST00000476605.7
ENST00000489666.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp TTTTTCATTGGGTGTTATGGATCGCACAAAATCTTCTaGTGTCATAAACACTTCTGCTTCACCAGGCTCACT +
Preference number: 6 (lower is better)
Translates to: FFIGCYGSHKIF*CHKHFCFTRLT
Trigger: AGTGAGCCTGGTGAAGCAGAAGTGTTTATGACACCAGAAGATTTTGTGCGATCCATAACACCCAATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS CCA 72 bp ATTGATCCAGACCCAAGTGTTCTGGTTGTTTTTCATTaGGTGTTATGGATCGCACAAAATCTTCTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: IDPDPSVLVVFH*VLWIAQNLLVS
Trigger: TGACACCAGAAGATTTTGTGCGATCCATAACACCCAATGAAAAACAACCAGAACACTTGGGTCTGGATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361114.10
ENST00000398761.8
ENST00000603011.5
ENST00000604238.2
ENST00000635239.1
ENST00000642044.1
CDS TCA 72 bp AATCTGGCCTTTCCATCAAAGCGTTTTATTATATATTaGTCCAGACCCAAGTGTTCTGGTTGTTTTTCATTG +
Preference number: 6 (lower is better)
Translates to: NLAFPSKRFIIY*SRPKCSGCFSL
Trigger: CAATGAAAAACAACCAGAACACTTGGGTCTGGATCAATATATAATAAAACGCTTTGATGGAAAGGCCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604238.2
CDS TCA 72 bp TTCTTCACCTTTCCATCAAAGCGTTTTATTATATATTaGTCCAGACCCAAGTGTTCTGGTTGTTTTTCATTG +
Preference number: 6 (lower is better)
Translates to: FFTFPSKRFIIY*SRPKCSGCFSL
Trigger: CAATGAAAAACAACCAGAACACTTGGGTCTGGATCAATATATAATAAAACGCTTTGATGGAAAGGTGAAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398761.8
CDS TCA 72 bp CAGAAATCCTTTCCATCAAAGCGTTTTATTATATATTaGTCCAGACCCAAGTGTTCTGGTTGTTTTTCATTG +
Preference number: 6 (lower is better)
Translates to: QKSFPSKRFIIY*SRPKCSGCFSL
Trigger: CAATGAAAAACAACCAGAACACTTGGGTCTGGATCAATATATAATAAAACGCTTTGATGGAAAGGATTTCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635239.1
ENST00000642044.1