Pregenerated sensors for MICOS13 (Homo sapiens)
Ensembl gene IDs: ENSG00000174917Ensembl transcript IDs: ENST00000585605.1, ENST00000587589.1, ENST00000590075.1, ENST00000590389.5
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACTCCCTGGGCGCCTCCTaGCCGCTGTCACTCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHSLGAS*PLSLAA Trigger: AGCTGCGAGTGACAGCGGGCAGGAGGCGCCCAGGGA...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590389.5 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACGGAGGGGCTGGGAGCTaGGGTATCTGCAGGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHGGAGS*GICRPV Trigger: GACAGGCCTGCAGATACCCCAGCTCCCAGCCCCTCC...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587589.1 ENST00000590389.5 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACTTCTGTAGGGCTGCCTaGCTCTTGTCGCTGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHFCRAA*LLSLGP Trigger: GGGGCCCAGCGACAAGAGCCAGGCAGCCCTACAGAA...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587589.1 ENST00000590389.5 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACGAAACCAAGTGTCCCTaGGCGCCTCCTGCCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHETKCP*APPARC Trigger: ACAGCGGGCAGGAGGCGCCCAGGGACACTTGGTTTC...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590389.5 |
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| CDS-3UTR GCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACGCTGGAGTGCAGTGGTaGAACCTCGGCTCACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHAGVQW*NLGSLQ Trigger: TTGCAGTGAGCCGAGGTTGCACCACTGCACTCCAGC...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587589.1 ENST00000590389.5 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACGAAGCCTTCCAGCCCTaGAGAAACCAAGTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHEAFQP*RNQVSL Trigger: CAGGGACACTTGGTTTCTCCAGGGCTGGAAGGCTTC...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590389.5 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACCTCTCAAGCAGCAGCTaGGATTACAGGTGTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHLSSSS*DYRCAP Trigger: TGGTGCACACCTGTAATCCCAGCTGCTGCTTGAGAG...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587589.1 ENST00000590389.5 |
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| CDS-3UTR GCA 90 bp | AGCAATTCTCCTGCTTCAGCCTCTCAAGCAGCAGCTGGGATTACAGGTGTGCACTTCAAGCAATTCTCCTaGTTCAGCCTCTCAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SNSPASASQAAAGITGVHFKQFS*FSLSSS Trigger: GCTGCTTGAGAGGCTGAAGCAGGAGAATTGCTTGAA...GTGCACACCTGTAATCCCAGCTGCTGCTTGAGAGGCTGAAGCAGGAGAATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587589.1 ENST00000590389.5 |
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| CDS TCA 90 bp | ATATGGAGGACAACATCGTGCAGGGCTGGAGGGACCTCCCAGAGCTaGCCACCCGCCAAACCCTGGCCTCGTTCCCGGCCCGTAGTACCT | + |
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Preference number: 5 (lower is better) Translates to: IWRTTSCRAGGTSQS*PPAKPWPRSRPVVP Trigger: AGGTACTACGGGCCGGGAACGAGGCCAGGGTTTGGCGGGTGGTCAGCTCTGGGAGGTCCCTCCAGCCCTGCACGATGTTGTCCTCCATAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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| CDS CCA 90 bp | GAGAATCAGGTCAGCATCAATATGGAGGACAACATCGTGCAGGGCTaGAGGGACCTCCCAGAGCTGACCACCCGCCAAACCCTGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: ENQVSINMEDNIVQG*RDLPELTTRQTLAS Trigger: CGAGGCCAGGGTTTGGCGGGTGGTCAGCTCTGGGAGGTCCCTCCAGCCCTGCACGATGTTGTCCTCCATATTGATGCTGACCTGATTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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| CDS TCA 72 bp | ACAACATCGTGCAGGGCTGGAGGGACCTCCCAGAGCTaGCCACCCGCCAAACCCTGGCCTCGTTCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TTSCRAGGTSQS*PPAKPWPRSRP Trigger: GGGCCGGGAACGAGGCCAGGGTTTGGCGGGTGGTCAGCTCTGGGAGGTCCCTCCAGCCCTGCACGATGTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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| CDS TCA 72 bp | GTACTCGCGGGCCTTGGAGGGGGCCACCGACAGAGCTaGCATCACCGTCATGATGCTCTGTCTCCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLAGLGGGHRQS*HHRHDALSPRL Trigger: CAGCCTGGGAGACAGAGCATCATGACGGTGATGTCAGCTCTGTCGGTGGCCCCCTCCAAGGCCCGCGAGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585605.1 |
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| CDS CCA 72 bp | GTCAGCATCAATATGGAGGACAACATCGTGCAGGGCTaGAGGGACCTCCCAGAGCTGACCACCCGCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: VSINMEDNIVQG*RDLPELTTRQT Trigger: GGTTTGGCGGGTGGTCAGCTCTGGGAGGTCCCTCCAGCCCTGCACGATGTTGTCCTCCATATTGATGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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| CDS TCA 72 bp | GGGAGCTGGGAAAAAGAGATGGGCAGAAAGAACTGGTaGAAAGGCTCAGCAGCCCATCCCCAGAGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSWEKEMGRKNW*KGSAAHPQRRR Trigger: CCTCCGCCTCTGGGGATGGGCTGCTGAGCCTTTTCACCAGTTCTTTCTGCCCATCTCTTTTTCCCAGCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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| CDS CCA 72 bp | AGGAGGACAGGCCGGAGAATCAGGTCAGCATCAATATaGAGGACAACATCGTGCAGGGCTGGAGGGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRTGRRIRSASI*RTTSCRAGGTS Trigger: GGAGGTCCCTCCAGCCCTGCACGATGTTGTCCTCCATATTGATGCTGACCTGATTCTCCGGCCTGTCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590075.1 |
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