RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICOS10 (Homo sapiens)

Ensembl gene IDs: ENSG00000173436

Ensembl transcript IDs: ENST00000322753.7, ENST00000462646.5, ENST00000467029.5, ENST00000479642.1, ENST00000481464.5, ENST00000486890.5, ENST00000498642.5, ENST00000617872.4, ENST00000648702.1

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCAGCAGTaGGACCGCCTTGCAGTAGGCACAGCGGAGATGTGCCCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: AIHTARILPLLIQQQ*DRLAVGTAEMCPAR
Trigger: CCTGGCAGGGCACATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 90 bp CCCAACAACTGGTTTCAGGGGGTTCTCAGAGAGGCTGTGAGCAGGTaGCTACAGCTGCTGGCAGTTCACACACAGTCCTCCTCATGCTCA +
Preference number: 1 (lower is better)
Translates to: PNNWFQGVLREAVSR*LQLLAVHTQSSSCS
Trigger: TGAGCATGAGGAGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAACCCCCTGAAACCAGTTGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 90 bp GTGCCTTTGCCAACAAGCCGGGACTTTCTGAAGGTTGATCTGAGATaGGGGCAGGGAGTGGGGACAAGATCAAGTGTGCTTTGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: VPLPTSRDFLKVDLR*GQGVGTRSSVLWAS
Trigger: GCTGGCCCAAAGCACACTTGATCTTGTCCCCACTCCCTGCCCCCATCTCAGATCAACCTTCAGAAAGTCCCGGCTTGTTGGCAAAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp GAAGGATACCCAACAACTGGTTTCAGGGGGTTCTCAGAGAGGCTGTaGGCAGGTGGCTACAGCTGCTGGCAGTTCACACACAGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: EGYPTTGFRGFSERL*AGGYSCWQFTHSPP
Trigger: AGGAGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAACCCCCTGAAACCAGTTGTTGGGTATCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 90 bp CGCAGGCATTCCGTCGCCTGTGGGGCCATCCTAGGGAGACATAGTTaGTCCTTCTCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCT +
Preference number: 1 (lower is better)
Translates to: RRHSVACGAILGRHS*SFSFVLSVLCLHLS
Trigger: AGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGAGAAGGAGCAACTATGTCTCCCTAGGATGGCCCCACAGGCGACGGAATGCCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp CAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCTaGCCCCTTTCTCAGAGCACTTCAGTGGTGCTTCCAAGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: QCFLWPLSRTIPSDS*PLSQSTSVVLPRCQ
Trigger: TTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 90 bp ACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTaGGCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCAG +
Preference number: 1 (lower is better)
Translates to: TVSSSMKLQDLTSME*AIHTARILPLLIQQ
Trigger: CTGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp CGCAGCAGCAATCTTCAACTTCTGATTACGAGGTGGAAGCAGTTCTaGAAACTACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAAC +
Preference number: 1 (lower is better)
Translates to: RSSNLQLLITRWKQF*KLRLRGQMGRIPNN
Trigger: GTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGTAGTTTTCAGAACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGCTGCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 90 bp CTATTCCCTCAGACAGCTGACCCCTTTCTCAGAGCACTTCAGTGGTaGTTCCAAGGTGCCAAAGGGATCCATCCAAATAAATGCCTAAAG +
Preference number: 1 (lower is better)
Translates to: LFPQTADPFLRALQW*FQGAKGIHPNKCLK
Trigger: CTTTAGGCATTTATTTGGATGGATCCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTGAGGGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 90 bp GAACTATTCCCTCAGACAGCTGACCCCTTTCTCAGAGCACTTCAGTaGTGCTTCCAAGGTGCCAAAGGGATCCATCCAAATAAATGCCTA +
Preference number: 1 (lower is better)
Translates to: ELFPQTADPFLRALQ*CFQGAKGIHPNKCL
Trigger: TAGGCATTTATTTGGATGGATCCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTGAGGGAATAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp GGACTTCAAGACGGCATCTGCAATCTTTTGAAATGGATGAGAGGATaGCACTCACTAAAGGAGACAGCTCAACAGTGTGTTCTGAGGCCA +
Preference number: 1 (lower is better)
Translates to: GLQDGICNLLKWMRG*HSLKETAQQCVLRP
Trigger: TGGCCTCAGAACACACTGTTGAGCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATGCCGTCTTGAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp GCTGGCAGTTCACACACAGTCCTCCTCATGCTCAGAGACCAAAGGTaGAGAAACAAAGGCCATGCAATGGACTTCCTCTTTTTGTTTAAT +
Preference number: 1 (lower is better)
Translates to: AGSSHTVLLMLRDQR*RNKGHAMDFLFLFN
Trigger: ATTAAACAAAAAGAGGAAGTCCATTGCATGGCCTTTGTTTCTTCACCTTTGGTCTCTGAGCATGAGGAGGACTGTGTGTGAACTGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 90 bp GCTTCCCCTAGTGGGTACATGGAATGCCAAAGTCATTCACCTAAATaGGCTCAAAATACATATTGTTCTGGGCCAAATTATACAGTGTCA +
Preference number: 1 (lower is better)
Translates to: ASPSGYMECQSHSPK*AQNTYCSGPNYTVS
Trigger: TGACACTGTATAATTTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATTCCATGTACCCACTAGGGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCCCGGCCAGGTGGGTATaGCATGAGCTTTCCTCCGCC +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSPARWV*HELSSA
Trigger: GGCGGAGGAAAGCTCATGGCATACCCACCTGGCCGG...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCTTCTCAGAGAGGCTGTaGGCAGGTGGCTACAGCTGC +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSFSERL*AGGYSC
Trigger: GCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAA...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTGGGATTCCCAGTCAACTGCCAGGTCCCCAGGTaGGAACACACGAAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: DPEQTQRLPSFCLGFPVNCQVPR*EHTKRC
Trigger: GCACCTCTTCGTGTGTTCTCACCTGGGGACCTGGCA...GTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCTGCCAGGTCCCCAGGTaGGAACACACGAAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGICQVPR*EHTKRC
Trigger: GCACCTCTTCGTGTGTTCTCACCTGGGGACCTGGCA...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCGAACACACGAAGAGGTaGCACAGAAGGAAAGGCGCC +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSEHTKR*HRRKGA
Trigger: GGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTC...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCGCAGTGGGACCGCCTTaGAGTAGGCACAGCGGAGAT +
Preference number: 2 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAAVGPP*SRHSGD
Trigger: ATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGC...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCAGTTGGAGACCAGCATaGCCAAGGAGAAACACCGTC +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSSWRPA*PRRNTV
Trigger: GACGGTGTTTCTCCTTGGTCATGCTGGTCTCCAACT...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCGTGGTGCTTCCAAGGTaGCAAAGGGATCCATCCAAA +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSVVLPR*QRDPSK
Trigger: TTTGGATGGATCCCTTTGGCACCTTGGAAGCACCAC...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCGGACAAGATCAAGTGTaGTTTGGGCCAGCCTCCGCT +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIGQDQV*FGPASA
Trigger: AGCGGAGGCTGGCCCAAAGCACACTTGATCTTGTCC...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCGGTGGCTACAGCTGCTaGCAGTTCACACACAGTCCT +
Preference number: 2 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAGGYSC*QFTHSP
Trigger: AGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACC...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 90 bp AGAGCTGAAGCTTGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCCATCCACACAGCCAGGATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: RAEAWTVSSSMKLQD*TSMEWAIHTARILP
Trigger: GGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCAAGCTTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 90 bp GAACTAAGGTCTAATCAATGTTCCAGAACTGGAGTCAGACATGAGTaGTACCCTATTGCCCAGCCTCCCCCTCCATGCCTTTCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: ELRSNQCSRTGVRHE*YPIAQPPPPCLSPA
Trigger: GGCAGGGGAAAGGCATGGAGGGGGAGGCTGGGCAATAGGGTACAACTCATGTCTGACTCCAGTTCTGGAACATTGATTAGACCTTAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGTTCTCAGAGAGGCTGTaGGCAGGTGGCTACAGCTGC +
Preference number: 2 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRFSERL*AGGYSC
Trigger: GCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAA...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCAGAAATAAGAACGGCTaGGCGCTGGGGTTCTGTATA +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSRNKNG*ALGFCI
Trigger: TATACAGAACCCCAGCGCTCAGCCGTTCTTATTTCT...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTGCAGGTGGCTACAGCTaGTGGCAGTTCACACACAGT +
Preference number: 2 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSAGGYS*WQFTHS
Trigger: ACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGC...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGTCGCCGGGCTGGAGTaGAGTGGCGCGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANVAGLE*SGAISA
Trigger: AGCTGAGATCGCGCCACTGCACTCCAGCCCGGCGAC...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAAGAGCACTTCAGTGGTaGTTCCAAGGTGCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: KQLASASCGLYPELFPQTRALQW*FQGAKG
Trigger: CCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCT...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAGAACGGCTGAGCGCTaGGGTTCTGTATATCGTCTG +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIRTAER*GSVYRL
Trigger: CAGACGATATACAGAACCCCAGCGCTCAGCCGTTCT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGTTATCCATTTATCTCTaGTGCTTACAACAGTGCCTC +
Preference number: 2 (lower is better)
Translates to: QSRPLLGRHSFILASCALLSIYL*CLQQCL
Trigger: GAGGCACTGTTGTAAGCAGCAGAGATAAATGGATAA...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCGTAACACAGAATGTGTaGCTTTGCCAACAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIVTQNV*LCQQAG
Trigger: CCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTAC...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGCTAATACAGCAGCAGTaGGACCGCCTTGCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRLIQQQ*DRLAVG
Trigger: GCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAG...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCTCCGCCCTCCAGAGCTaGAGCTTGGACTGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASSALQS*SLDCLK
Trigger: CTTGAGACAGTCCAAGCTTCAGCTCTGGAGGGCGGA...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATCAGGTGGGTATGCCATaGGCTTTCCTCCGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANQVGMP*AFLRPP
Trigger: TGGAGGGCGGAGGAAAGCTCATGGCATACCCACCTG...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAAACTGGAGTCAGACATaGGTTGTACCCTATTGCCCA +
Preference number: 2 (lower is better)
Translates to: KQLASASCGLYPELFPQTNWSQT*VVPYCP
Trigger: TGGGCAATAGGGTACAACTCATGTCTGACTCCAGTT...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCCCTGCCTCAACCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASPASTS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGTTGAGGCAGG...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCCTGAGGGAGGGTATTTaGTACCCTGAATGTACTCAC +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGILREGI*YPECTH
Trigger: GTGAGTACATTCAGGGTAGCAAATACCCTCCCTCAG...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCAGGATACCCAACAACTaGTTTCAGGGGGTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWARIPNN*FQGVLR
Trigger: TCTGAGAACCCCCTGAAACCAGTTGTTGGGTATCCT...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCCCCCTAGTGGGTACATaGAATGCCAAAGTCATTCAC +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIPLVGT*NAKVIH
Trigger: GTGAATGACTTTGGCATTCCATGTACCCACTAGGGG...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTCTCAGAGACCAAAGGTaGAGAAACAAAGGCCATGCA +
Preference number: 2 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSLRDQR*RNKGHA
Trigger: TGCATGGCCTTTGTTTCTTCACCTTTGGTCTCTGAG...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCGCAATCTTCAACTTCTaGTTACGAGGTGGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIAIFNF*LRGGSS
Trigger: ACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGC...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCCAGGTGGGTATGCCATaGGCTTTCCTCCGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFQVGMP*AFLRPP
Trigger: TGGAGGGCGGAGGAAAGCTCATGGCATACCCACCTG...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATCCTGCCTCAACCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANPASTS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGTTGAGGCAGG...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGTCCTCAAACTTCAGCTaGTACGTGAAGATAAAATTA +
Preference number: 2 (lower is better)
Translates to: QSRPLLGRHSFILASCALSSNFS*YVKIKL
Trigger: TAATTTTATCTTCACGTAGCAGCTGAAGTTTGAGGA...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAGGTGTGCGCCACCATaGCCAGCTGATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIRCAPP*PADFYI
Trigger: AATATAAAAATCAGCTGGGCATGGTGGCGCACACCT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCTGTTATTCTTCTCTCTaGCTGAATGAGGATGGGAAA +
Preference number: 2 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSCYSSL*LNEDGK
Trigger: TTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACA...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCCTAATACAGCAGCAGTaGGACCGCCTTGCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASLIQQQ*DRLAVG
Trigger: GCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAG...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTCCAGAGCTGAAGCTTaGACTGTCTCAAGCTCTATG +
Preference number: 2 (lower is better)
Translates to: HRNKLRGASEVALLSSNFSRAEA*TVSSSM
Trigger: CATAGAGCTTGAGACAGTCCAAGCTTCAGCTCTGGA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCGGATACAGGGGCAAGTaGGATCGGGCTCTCCCTATC +
Preference number: 2 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSGYRGK*DRALPI
Trigger: GATAGGGAGAGCCCGATCCCACTTGCCCCTGTATCC...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTGCAATCTTCAACTTCTaGTTACGAGGTGGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSAIFNF*LRGGSS
Trigger: ACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGC...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAAATGGATGAGAGGATaGCACTCACTAAAGGAGACA +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIKWMRG*HSLKET
Trigger: TGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACAGCTCCTCCGGCCAGGTaGGTATGCCATGAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTAPPAR*VCHELS
Trigger: GGAAAGCTCATGGCATACCCACCTGGCCGGAGGAGC...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCAAGGTTGATCTGAGATaGGGGCAGGGAGTGGGGACA +
Preference number: 2 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSKVDLR*GQGVGT
Trigger: TGTCCCCACTCCCTGCCCCCATCTCAGATCAACCTT...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCAGAGCAGGCCACTTTTaGGGCGCCACAGCTTTATCC +
Preference number: 2 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSRAGHF*GATALS
Trigger: GGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCT...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAAGTTGGAGACCAGCATaGCCAAGGAGAAACACCGTC +
Preference number: 2 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKSWRPA*PRRNTV
Trigger: GACGGTGTTTCTCCTTGGTCATGCTGGTCTCCAACT...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCGTGGTGCTTCCAAGGTaGCAAAGGGATCCATCCAAA +
Preference number: 2 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASVVLPR*QRDPSK
Trigger: TTTGGATGGATCCCTTTGGCACCTTGGAAGCACCAC...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCAAAGCAACTGGCCAGTaGTTCCTGTGGCCTCTATCC +
Preference number: 2 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSKATGQ*FLWPLS
Trigger: GGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTTT...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCGGTGGCTACAGCTGCTaGCAGTTCACACACAGTCCT +
Preference number: 2 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFGGYSC*QFTHSP
Trigger: AGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACC...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAATTGACTTCAATGGAGTaGGCCATCCACACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKLTSME*AIHTAR
Trigger: CCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAA...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGCTCCTCCGGCCAGGTaGGTATGCCATGAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQAPPAR*VCHELS
Trigger: GGAAAGCTCATGGCATACCCACCTGGCCGGAGGAGC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACAAGGTGGAAGCAGTTCTaGAAACTACGCCTGAGGGGG +
Preference number: 2 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTRWKQF*KLRLRG
Trigger: CCCCCTCAGGCGTAGTTTTCAGAACTGCTTCCACCT...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCAAAGAAACAAAGGCCATaGAATGGACTTCCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSKKQRP*NGLPLF
Trigger: AAAAAGAGGAAGTCCATTGCATGGCCTTTGTTTCTT...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAAGAAACAAAGGCCATaGAATGGACTTCCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIKKQRP*NGLPLF
Trigger: AAAAAGAGGAAGTCCATTGCATGGCCTTTGTTTCTT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGAGGGGCATCAGAAGTaGCCCTTTTGTCCTCAAACT +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANEGHQK*PFCPQT
Trigger: AGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTC...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGGATACAGGGGCAAGTaGGATCGGGCTCTCCCTATC +
Preference number: 2 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQGYRGK*DRALPI
Trigger: GATAGGGAGAGCCCGATCCCACTTGCCCCTGTATCC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATCTCAGAGCACTTCAGTaGTGCTTCCAAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANLRALQ*CFQGAK
Trigger: TTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAG...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 90 bp AGAGTTGTGTTTGCACGTCTGTCTTTCCATCAGACTCTAAGCTCCTaGAAGGCAGAAGCCTGTGTCTATTTATCCATTTATCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RVVFARLSFHQTLSS*KAEACVYLSIYLCC
Trigger: GCAGCAGAGATAAATGGATAAATAGACACAGGCTTCTGCCTTCAAGGAGCTTAGAGTCTGATGGAAAGACAGACGTGCAAACACAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCCTCAGAGACCAAAGGTaGAGAAACAAAGGCCATGCA +
Preference number: 2 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSLRDQR*RNKGHA
Trigger: TGCATGGCCTTTGTTTCTTCACCTTTGGTCTCTGAG...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGCAGGTGGCTACAGCTaGTGGCAGTTCACACACAGT +
Preference number: 2 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQAGGYS*WQFTHS
Trigger: ACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 90 bp CTTGAATTTCTAATGAAACTTAAGAGTAACACAGAATGTGTGCCTTaGCCAACAAGCCGGGACTTTCTGAAGGTTGATCTGAGATGGGGG +
Preference number: 2 (lower is better)
Translates to: LEFLMKLKSNTECVP*PTSRDFLKVDLRWG
Trigger: CCCCCATCTCAGATCAACCTTCAGAAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTACTCTTAAGTTTCATTAGAAATTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCAGAAATAAGAACGGCTaGGCGCTGGGGTTCTGTATA +
Preference number: 2 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFRNKNG*ALGFCI
Trigger: TATACAGAACCCCAGCGCTCAGCCGTTCTTATTTCT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAGTTCTCAGTGTACTTTaGCTACACCTCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKVLSVL*LHLSSP
Trigger: TGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAAC...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR TCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGCATCCCTGGTTCAAGTaGAACCACAGGAACAAACTC +
Preference number: 2 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTHPWFK*NHRNKL
Trigger: GAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATG...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAACAGAATGTGTGCCTTTaGCAACAAGCCGGGACTTTC +
Preference number: 2 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQQNVCL*QQAGTF
Trigger: GAAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTG...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGTAACACAGAATGTGTaGCTTTGCCAACAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQVTQNV*LCQQAG
Trigger: CCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTAC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACATCCAGAGCTGAAGCTTaGACTGTCTCAAGCTCTATG +
Preference number: 2 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTSRAEA*TVSSSM
Trigger: CATAGAGCTTGAGACAGTCCAAGCTTCAGCTCTGGA...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR GCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATTCCTCAAACTTCAGCTaGTACGTGAAGATAAAATTA +
Preference number: 2 (lower is better)
Translates to: VCSEAISQNKGILLHKANSSNFS*YVKIKL
Trigger: TAATTTTATCTTCACGTAGCAGCTGAAGTTTGAGGA...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGTGTATTTATGTATGTTaGCAGAGCAGGCCACTTTTG +
Preference number: 2 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTCIYVC*QSRPLL
Trigger: CAAAAGTGGCCTGCTCTGCCAACATACATAAATACA...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 72 bp TCTTCCCCTGCTAATACAGCAGCAGTGGGACCGCCTTaGAGTAGGCACAGCGGAGATGTGCCCTGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: SSPANTAAVGPP*SRHSGDVPCQV
Trigger: GACCTGGCAGGGCACATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAGCAGGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp CGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTaGTTTCAGGGGGTTCTCAGAGAGGCTGTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: RLRGQMGRIPNN*FQGVLREAVSR
Trigger: CCTGCTCACAGCCTCTCTGAGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp ACAGCCAGGATTCTTCCCCTGCTAATACAGCAGCAGTaGGACCGCCTTGCAGTAGGCACAGCGGAGATGTGC +
Preference number: 3 (lower is better)
Translates to: TARILPLLIQQQ*DRLAVGTAEMC
Trigger: GCACATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAGCAGGGGAAGAATCCTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp ATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTaGGATTCCCAGTCAACTTCGGGTCCCAGCGCAGGC +
Preference number: 3 (lower is better)
Translates to: ILSKHRGYPPSV*DSQSTSGPSAG
Trigger: GCCTGCGCTGGGACCCGAAGTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 72 bp CTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCTaGCCCCTTTCTCAGAGCACTTCAGTGGTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: LWPLSRTIPSDS*PLSQSTSVVLP
Trigger: TGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 72 bp TCCGTCGCCTGTGGGGCCATCCTAGGGAGACATAGTTaGTCCTTCTCCTTTGTTCTCAGTGTACTTTGCCTA +
Preference number: 3 (lower is better)
Translates to: SVACGAILGRHS*SFSFVLSVLCL
Trigger: TAGGCAAAGTACACTGAGAACAAAGGAGAAGGAGCAACTATGTCTCCCTAGGATGGCCCCACAGGCGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp AGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTaGGCCATCCACACAGCCAGGATTCTTCCCCTGCTA +
Preference number: 3 (lower is better)
Translates to: SSMKLQDLTSME*AIHTARILPLL
Trigger: TAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp CCTCAGACAGCTGACCCCTTTCTCAGAGCACTTCAGTaGTGCTTCCAAGGTGCCAAAGGGATCCATCCAAAT +
Preference number: 3 (lower is better)
Translates to: PQTADPFLRALQ*CFQGAKGIHPN
Trigger: ATTTGGATGGATCCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: HRNKLRGASEVALLSSNFMKLQD*TSMEWA
Trigger: GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCAT...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 72 bp TCTCCATCAGGCCACGCAGCAGCAATCTTCAACTTCTaGTTACGAGGTGGAAGCAGTTCTGAAAACTACGCC +
Preference number: 3 (lower is better)
Translates to: SPSGHAAAIFNF*LRGGSSSENYA
Trigger: GGCGTAGTTTTCAGAACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGCTGCTGCGTGGCCTGATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 72 bp CAGACAGCTGACCCCTTTCTCAGAGCACTTCAGTGGTaGTTCCAAGGTGCCAAAGGGATCCATCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: QTADPFLRALQW*FQGAKGIHPNK
Trigger: TTTATTTGGATGGATCCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAGAAAGGGGTCAGCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCAAGATCAAGTGTGCTTaGGGCCAGCCTCCGCTAAGG +
Preference number: 3 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASKIKCA*GQPPLR
Trigger: CCTTAGCGGAGGCTGGCCCAAAGCACACTTGATCTT...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAATGAGTTGTACCCTATaGCCCAGCCTCCCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKMSCTL*PSLPLH
Trigger: ATGGAGGGGGAGGCTGGGCAATAGGGTACAACTCAT...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSMKLQD*TSMEWA
Trigger: GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCAT...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGGAGTCAGACATGAGTaGTACCCTATTGCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: VCSEAISQNKGILLHKANGVRHE*YPIAQP
Trigger: AGGCTGGGCAATAGGGTACAACTCATGTCTGACTCC...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 72 bp CAAAACTACATCGTCATCTCCTCCATTCCCAACCCCTaGATTTCTTACAAGCAGGACTTCAAGACGGCATCT +
Preference number: 3 (lower is better)
Translates to: QNYIVISSIPNP*ISYKQDFKTAS
Trigger: AGATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAGATGACGATGTAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 72 bp AATCTTCAACTTCTGATTACGAGGTGGAAGCAGTTCTaGAAACTACGCCTGAGGGGGCAAATGGGAAGGATA +
Preference number: 3 (lower is better)
Translates to: NLQLLITRWKQF*KLRLRGQMGRI
Trigger: TATCCTTCCCATTTGCCCCCTCAGGCGTAGTTTTCAGAACTGCTTCCACCTCGTAATCAGAAGTTGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGCAGACTCTAAGCTCCTaGAAGGCAGAAGCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTQTLSS*KAEACV
Trigger: GACACAGGCTTCTGCCTTCAAGGAGCTTAGAGTCTG...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR-3UTR CAA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCGTTGCTCCTTCTCCTTaGTTCTCAGTGTACTTTGCC +
Preference number: 3 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSVAPSP*FSVYFA
Trigger: GGCAAAGTACACTGAGAACAAAGGAGAAGGAGCAAC...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR TCA 72 bp GACGGCATCTGCAATCTTTTGAAATGGATGAGAGGATaGCACTCACTAAAGGAGACAGCTCAACAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: DGICNLLKWMRG*HSLKETAQQCV
Trigger: AACACACTGTTGAGCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATGCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR GCA 72 bp AATACAAAGCTATCTAGAACTAAAGCAACTGGCCAGTaGTTCCTGTGGCCTCTATCCAGAACTATTCCCTCA +
Preference number: 3 (lower is better)
Translates to: NTKLSRTKATGQ*FLWPLSRTIPS
Trigger: TGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTTTAGTTCTAGATAGCTTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp AAATGCAGCCTGATAAAGCTTCCCCTAGTGGGTACATaGAATGCCAAAGTCATTCACCTAAATGAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: KCSLIKLPLVGT*NAKVIHLNELK
Trigger: TTTGAGCTCATTTAGGTGAATGACTTTGGCATTCCATGTACCCACTAGGGGAAGCTTTATCAGGCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CCA 72 bp TACGATAAGGAAAAAGAAATAAGAACGGCTGAGCGCTaGGGTTCTGTATATCGTCTGAAGAAATTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: YDKEKEIRTAER*GSVYRLKKLLK
Trigger: TTTTAGCAATTTCTTCAGACGATATACAGAACCCCAGCGCTCAGCCGTTCTTATTTCTTTTTCCTTATCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGCAGGTGGGTATGCCATaGGCTTTCCTCCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSRPLLGRHSFILASCALQVGMP*AFLRPP
Trigger: TGGAGGGCGGAGGAAAGCTCATGGCATACCCACCTG...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGTCCATGCCTTTCCCCTaGCCCTACACACCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QSRPLLGRHSFILASCALSMPFP*PYTPWL
Trigger: TAGCCAGGGTGTGTAGGGGCAGGGGAAAGGCATGGA...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTCCAGGAAGCGGAGGTTaGAGCAGGCCGAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSPGSGG*SRPRSP
Trigger: TGGCGATCTCGGCCTGCTGCAACCTCCGCTTCCTGG...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTTGCCAGGTCCCCAGGTaGGAACACACGAAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSCQVPR*EHTKRC
Trigger: GCACCTCTTCGTGTGTTCTCACCTGGGGACCTGGCA...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTGGGATTCCCAGTCAACCCAGGAAGCGGAGGTTaGAGCAGGCCGAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: DPEQTQRLPSFCLGFPVNPGSGG*SRPRSP
Trigger: TGGCGATCTCGGCCTGCTGCAACCTCCGCTTCCTGG...GTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCGTCGCCGGGCTGGAGTaGAGTGGCGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFVAGLE*SGAISA
Trigger: AGCTGAGATCGCGCCACTGCACTCCAGCCCGGCGAC...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTGGATACAGGGGCAAGTaGGATCGGGCTCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSGYRGK*DRALPI
Trigger: GATAGGGAGAGCCCGATCCCACTTGCCCCTGTATCC...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCCAGGTGGGTATGCCATaGGCTTTCCTCCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAQVGMP*AFLRPP
Trigger: TGGAGGGCGGAGGAAAGCTCATGGCATACCCACCTG...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCGCTCCTCCGGCCAGGTaGGTATGCCATGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIAPPAR*VCHELS
Trigger: GGAAAGCTCATGGCATACCCACCTGGCCGGAGGAGC...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGCTCAGAGCACTTCAGTaGTGCTTCCAAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: QSRPLLGRHSFILASCALLRALQ*CFQGAK
Trigger: TTTGGCACCTTGGAAGCACCACTGAAGTGCTCTGAG...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCTCCGCCCTCCAGAGCTaGAGCTTGGACTGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGISALQS*SLDCLK
Trigger: CTTGAGACAGTCCAAGCTTCAGCTCTGGAGGGCGGA...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGCCGGCCAGGTGGGTATaGCATGAGCTTTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRPARWV*HELSSA
Trigger: GGCGGAGGAAAGCTCATGGCATACCCACCTGGCCGG...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCTCCATGCCTTTCCCCTaGCCCTACACACCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWASMPFP*PYTPWL
Trigger: TAGCCAGGGTGTGTAGGGGCAGGGGAAAGGCATGGA...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGTCCAGAGCTGAAGCTTaGACTGTCTCAAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: QSRPLLGRHSFILASCALSRAEA*TVSSSM
Trigger: CATAGAGCTTGAGACAGTCCAAGCTTCAGCTCTGGA...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCGGATACAGGGGCAAGTaGGATCGGGCTCTCCCTATC +
Preference number: 4 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAGYRGK*DRALPI
Trigger: GATAGGGAGAGCCCGATCCCACTTGCCCCTGTATCC...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCCATCCTGTGCCCTGCTaGGTTCCCATCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFHPVPC*VPIAVS
Trigger: GGAGACAGCGATGGGAACCCAGCAGGGCACAGGATG...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 72 bp GCTTGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCCATCCACACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWTVSSSMKLQD*TSMEWAIHTAR
Trigger: CCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTTCTCAGAGAGGCTGTaGGCAGGTGGCTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFFSERL*AGGYSC
Trigger: GCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCAGGTGGCTACAGCTaGTGGCAGTTCACACACAGT +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTAGGYS*WQFTHS
Trigger: ACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGC...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGGCAGTGGGACCGCCTTaGAGTAGGCACAGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRAVGPP*SRHSGD
Trigger: ATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGC...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTGGGATTCCCAGTCAACAGAGCACTTCAGTGGTaGTTCCAAGGTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: DPEQTQRLPSFCLGFPVNRALQW*FQGAKG
Trigger: CCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCT...GTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGGACAAGATCAAGTGTaGTTTGGGCCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTGQDQV*FGPASA
Trigger: AGCGGAGGCTGGCCCAAAGCACACTTGATCTTGTCC...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCACTAATACAGCAGCAGTaGGACCGCCTTGCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSLIQQQ*DRLAVG
Trigger: GCCTACTGCAAGGCGGTCCCACTGCTGCTGTATTAG...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTGAGGGGCATCAGAAGTaGCCCTTTTGTCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSEGHQK*PFCPQT
Trigger: AGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTC...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCAAGAGCAGGCCACTTTTaGGGCGCCACAGCTTTATCC +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSRAGHF*GATALS
Trigger: GGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCT...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCCTCAGAGACCAAAGGTaGAGAAACAAAGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSLRDQR*RNKGHA
Trigger: TGCATGGCCTTTGTTTCTTCACCTTTGGTCTCTGAG...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGTCCGCCCTCCAGAGCTaGAGCTTGGACTGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRSALQS*SLDCLK
Trigger: CTTGAGACAGTCCAAGCTTCAGCTCTGGAGGGCGGA...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAGTCGCCGGGCTGGAGTaGAGTGGCGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKVAGLE*SGAISA
Trigger: AGCTGAGATCGCGCCACTGCACTCCAGCCCGGCGAC...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAGAGCACTTCAGTGGTaGTTCCAAGGTGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIRALQW*FQGAKG
Trigger: CCCTTTGGCACCTTGGAAGCACCACTGAAGTGCTCT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAAAAGCAACTGGCCAGTaGTTCCTGTGGCCTCTATCC +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTKATGQ*FLWPLS
Trigger: GGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTTT...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTAGGATACCCAACAACTaGTTTCAGGGGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSRIPNN*FQGVLR
Trigger: TCTGAGAACCCCCTGAAACCAGTTGTTGGGTATCCT...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCATTGACTTCAATGGAGTaGGCCATCCACACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSLTSME*AIHTAR
Trigger: CCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAA...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCAAGAACGGCTGAGCGCTaGGGTTCTGTATATCGTCTG +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSRTAER*GSVYRL
Trigger: CAGACGATATACAGAACCCCAGCGCTCAGCCGTTCT...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTAAGGTTGATCTGAGATaGGGGCAGGGAGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSKVDLR*GQGVGT
Trigger: TGTCCCCACTCCCTGCCCCCATCTCAGATCAACCTT...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTGCAATCTTCAACTTCTaGTTACGAGGTGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSAIFNF*LRGGSS
Trigger: ACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGC...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTAGTTGGAGACCAGCATaGCCAAGGAGAAACACCGTC +
Preference number: 4 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSSWRPA*PRRNTV
Trigger: GACGGTGTTTCTCCTTGGTCATGCTGGTCTCCAACT...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGTAACACAGAATGTGTaGCTTTGCCAACAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTVTQNV*LCQQAG
Trigger: CCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTAC...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCGAGGGGCATCAGAAGTaGCCCTTTTGTCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIEGHQK*PFCPQT
Trigger: AGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTC...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp GATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTGGGATTCCCAGTCAACGCAATCTTCAACTTCTaGTTACGAGGTGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: DPEQTQRLPSFCLGFPVNAIFNF*LRGGSS
Trigger: ACTGCTTCCACCTCGTAATCAGAAGTTGAAGATTGC...GTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TTCAATGGAGTGGGCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCACATCCCTGGTTCAAGTaGAACCACAGGAACAAACTC +
Preference number: 4 (lower is better)
Translates to: FNGVGHPHSQDSSPANTAHPWFK*NHRNKL
Trigger: GAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATG...TGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCACATCCCTGGTTCAAGTaGAACCACAGGAACAAACTC +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSHPWFK*NHRNKL
Trigger: GAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATG...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAGAAATAAGAACGGCTaGGCGCTGGGGTTCTGTATA +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIRNKNG*ALGFCI
Trigger: TATACAGAACCCCAGCGCTCAGCCGTTCTTATTTCT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAACTGGAGTCAGACATaGGTTGTACCCTATTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGINWSQT*VVPYCP
Trigger: TGGGCAATAGGGTACAACTCATGTCTGACTCCAGTT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCCCGGCCAGGTGGGTATaGCATGAGCTTTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFPARWV*HELSSA
Trigger: GGCGGAGGAAAGCTCATGGCATACCCACCTGGCCGG...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCCTGAGGGAGGGTATTTaGTACCCTGAATGTACTCAC +
Preference number: 4 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWALREGI*YPECTH
Trigger: GTGAGTACATTCAGGGTAGCAAATACCCTCCCTCAG...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TTCAATGGAGTGGGCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCACTGAGGGAGGGTATTTaGTACCCTGAATGTACTCAC +
Preference number: 4 (lower is better)
Translates to: FNGVGHPHSQDSSPANTALREGI*YPECTH
Trigger: GTGAGTACATTCAGGGTAGCAAATACCCTCCCTCAG...TGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCGTGGTGCTTCCAAGGTaGCAAAGGGATCCATCCAAA +
Preference number: 4 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIVVLPR*QRDPSK
Trigger: TTTGGATGGATCCCTTTGGCACCTTGGAAGCACCAC...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCATCCATTCCCAACCCCTaGATTTCTTACAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSSIPNP*ISYKQD
Trigger: GTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGA...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACATCCATTCCCAACCCCTaGATTTCTTACAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTSIPNP*ISYKQD
Trigger: GTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGA...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGTTGACTTCAATGGAGTaGGCCATCCACACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRLTSME*AIHTAR
Trigger: CCTGGCTGTGTGGATGGCCCACTCCATTGAAGTCAA...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCTCCTCCGGCCAGGTaGGTATGCCATGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VCSEAISQNKGILLHKANAPPAR*VCHELS
Trigger: GGAAAGCTCATGGCATACCCACCTGGCCGGAGGAGC...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCGGCCAGTGCTTCCTGTaGCCTCTATCCAGAACTATT +
Preference number: 4 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIGQCFL*PLSRTI
Trigger: AATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCC...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 72 bp TCTAATCAATGTTCCAGAACTGGAGTCAGACATGAGTaGTACCCTATTGCCCAGCCTCCCCCTCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: SNQCSRTGVRHE*YPIAQPPPPCL
Trigger: AAGGCATGGAGGGGGAGGCTGGGCAATAGGGTACAACTCATGTCTGACTCCAGTTCTGGAACATTGATTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCTTCTCTCTGCCTGAATaGGGATGGGAAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIFSLPE*GWENDR
Trigger: TCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAA...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TTCAATGGAGTGGGCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCACTCAACAGTGTGTTCTaGGGCCATTTCTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: FNGVGHPHSQDSSPANTALNSVF*GHFSEQ
Trigger: TTGTTCTGAGAAATGGCCTCAGAACACACTGTTGAG...TGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGTTCTCAGTGTACTTTaGCTACACCTCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTVLSVL*LHLSSP
Trigger: TGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAAC...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGCAGAATGTGTGCCTTTaGCAACAAGCCGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRQNVCL*QQAGTF
Trigger: GAAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTG...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CTCCTCCATTCCCAACCCCTGCATTTCTTACAAGCAGGACTTCAAGACGGCATCAGAAACAAAGTCAGTTaGACAAGCCCACAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLHSQPLHFLQAGLQDGIRNKVS*TSPQGN
Trigger: GTTCCCTTGTGGGCTTGTGCAACTGACTTTGTTTCT...GATGCCGTCTTGAAGTCCTGCTTGTAAGAAATGCAGGGGTTGGGAATGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCGGTGGCTACAGCTGCTaGCAGTTCACACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASGGYSC*QFTHSP
Trigger: AGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACC...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTTGTCTAGGGAATTTGTaGCTACCTTGTGTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSCLGNL*LPCVLS
Trigger: AGACAAAACACAAGGTAGCCACAAATTCCCTAGACA...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCCCCCTAGTGGGTACATaGAATGCCAAAGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFPLVGT*NAKVIH
Trigger: GTGAATGACTTTGGCATTCCATGTACCCACTAGGGG...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGCTCAGAGACCAAAGGTaGAGAAACAAAGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRLRDQR*RNKGHA
Trigger: TGCATGGCCTTTGTTTCTTCACCTTTGGTCTCTGAG...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATAGGTGGAAGCAGTTCTaGAAACTACGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VCSEAISQNKGILLHKANRWKQF*KLRLRG
Trigger: CCCCCTCAGGCGTAGTTTTCAGAACTGCTTCCACCT...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGTGCCAGGTCCCCAGGTaGGAACACACGAAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTCQVPR*EHTKRC
Trigger: GCACCTCTTCGTGTGTTCTCACCTGGGGACCTGGCA...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCAAATGGATGAGAGGATaGCACTCACTAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAKWMRG*HSLKET
Trigger: TGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTT...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGGCAGTGGGACCGCCTTaGAGTAGGCACAGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTAVGPP*SRHSGD
Trigger: ATCTCCGCTGTGCCTACTGCAAGGCGGTCCCACTGC...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GATCCTGAGCAAACACAGAGGCTACCCTCCTTCTGTCTGGGATTCCCAGTCAACTTTCAGAGTTGTGTTTaGACGTCTGTCTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: DPEQTQRLPSFCLGFPVNFQSCV*TSVFPS
Trigger: TGATGGAAAGACAGACGTGCAAACACAACTCTGAAA...GTTGACTGGGAATCCCAGACAGAAGGAGGGTAGCCTCTGTGTTTGCTCAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTAGGTGTGCGCCACCATaGCCAGCTGATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSRCAPP*PADFYI
Trigger: AATATAAAAATCAGCTGGGCATGGTGGCGCACACCT...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGGTGTGCGCCACCATaGCCAGCTGATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIRCAPP*PADFYI
Trigger: AATATAAAAATCAGCTGGGCATGGTGGCGCACACCT...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACAGCCTTGTGGAAATACTTTaGAGAGTTTATTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: ATGQCFLWPLSRTIPSDSLVEIL*RVYLDR
Trigger: CCTGTCCAAATAAACTCTGCAAAGTATTTCCACAAG...GCTGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617872.4
CDS-3UTR CCA 90 bp GTGTGTTCTGAGGCCATTTCTCAGAACAAAGGCATACTTCTGCATAAGGCAAATAAGGTTGATCTGAGATaGGGGCAGGGAGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: VCSEAISQNKGILLHKANKVDLR*GQGVGT
Trigger: TGTCCCCACTCCCTGCCCCCATCTCAGATCAACCTT...ATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAGAAATGGCCTCAGAACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGCATCCTGTGCCCTGCTaGGTTCCCATCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTHPVPC*VPIAVS
Trigger: GGAGACAGCGATGGGAACCCAGCAGGGCACAGGATG...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGTTCTCAGAGAGGCTGTaGGCAGGTGGCTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTFSERL*AGGYSC
Trigger: GCAGCTGTAGCCACCTGCTCACAGCCTCTCTGAGAA...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAAATGGATGAGAGGATaGCACTCACTAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIKWMRG*HSLKET
Trigger: TGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTT...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp AAGCAACTGGCCAGTGCTTCCTGTGGCCTCTATCCAGAACTATTCCCTCAGACATGTATTTATGTATGTTaGCAGAGCAGGCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: KQLASASCGLYPELFPQTCIYVC*QSRPLL
Trigger: CAAAAGTGGCCTGCTCTGCCAACATACATAAATACA...TGTCTGAGGGAATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCCAGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCAGTTGGAGACCAGCATaGCCAAGGAGAAACACCGTC +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFSWRPA*PRRNTV
Trigger: GACGGTGTTTCTCCTTGGTCATGCTGGTCTCCAACT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGGCAGGTGGCTACAGCTaGTGGCAGTTCACACACAGT +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTAGGYS*WQFTHS
Trigger: ACTGTGTGTGAACTGCCAGCAGCTGTAGCCACCTGC...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTTATCCATTTATCTCTaGTGCTTACAACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFLSIYL*CLQQCL
Trigger: GAGGCACTGTTGTAAGCAGCAGAGATAAATGGATAA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCAGAAGTTGTTATTCTTCTCTCTaGCTGAATGAGGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: ASLVQVKPQEQTQRGIRSCYSSL*LNEDGK
Trigger: TTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACA...ACTTCTGATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTGTTATTCTTCTCTCTaGCTGAATGAGGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFCYSSL*LNEDGK
Trigger: TTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAGTAACACAGAATGTGTaGCTTTGCCAACAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKVTQNV*LCQQAG
Trigger: CCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTAC...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCAGGATACCCAACAACTaGTTTCAGGGGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASRIPNN*FQGVLR
Trigger: TCTGAGAACCCCCTGAAACCAGTTGTTGGGTATCCT...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTGTCTAGGGAATTTGTaGCTACCTTGTGTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFCLGNL*LPCVLS
Trigger: AGACAAAACACAAGGTAGCCACAAATTCCCTAGACA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAGGCCAGTGCTTCCTGTaGCCTCTATCCAGAACTATT +
Preference number: 4 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKGQCFL*PLSRTI
Trigger: AATAGTTCTGGATAGAGGCCACAGGAAGCACTGGCC...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGAACACACGAAGAGGTaGCACAGAAGGAAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQEHTKR*HRRKGA
Trigger: GGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCATCCTCAAACTTCAGCTaGTACGTGAAGATAAAATTA +
Preference number: 4 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSSSNFS*YVKIKL
Trigger: TAATTTTATCTTCACGTAGCAGCTGAAGTTTGAGGA...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCCAGAATGTGTGCCTTTaGCAACAAGCCGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFQNVCL*QQAGTF
Trigger: GAAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTG...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCCCACGACAAGTAAAATaGAATTATGGGTTGGTTACA +
Preference number: 4 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIPRQVK*NYGLVT
Trigger: TGTAACCAACCCATAATTGCATTTTACTTGTCGTGG...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGGTGGCTACAGCTGCTaGCAGTTCACACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQGGYSC*QFTHSP
Trigger: AGGACTGTGTGTGAACTGCCAGCAGCTGTAGCCACC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGAGAACGGCTGAGCGCTaGGGTTCTGTATATCGTCTG +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTRTAER*GSVYRL
Trigger: CAGACGATATACAGAACCCCAGCGCTCAGCCGTTCT...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCAAACTTCAGCTGCTACGTGAAGATAAAATTAACCCCAATCGGGCTCCTCCGGAAGAAACAAAGGCCATaGAATGGACTTCCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SNFSCYVKIKLTPIGLLRKKQRP*NGLPLF
Trigger: AAAAAGAGGAAGTCCATTGCATGGCCTTTGTTTCTT...CCGGAGGAGCCCGATTGGGGTTAATTTTATCTTCACGTAGCAGCTGAAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp CACAGGAACAAACTCAGAGGGGCATCAGAAGTGGCCCTTTTGTCCTCAAACTTCTCCTCAAACTTCAGCTaGTACGTGAAGATAAAATTA +
Preference number: 4 (lower is better)
Translates to: HRNKLRGASEVALLSSNFSSNFS*YVKIKL
Trigger: TAATTTTATCTTCACGTAGCAGCTGAAGTTTGAGGA...GAAGTTTGAGGACAAAAGGGCCACTTCTGATGCCCCTCTGAGTTTGTTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCCCCCTAGTGGGTACATaGAATGCCAAAGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFPLVGT*NAKVIH
Trigger: GTGAATGACTTTGGCATTCCATGTACCCACTAGGGG...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
3UTR CAA 72 bp CTAATGAAACTTAAGAGTAACACAGAATGTGTGCCTTaGCCAACAAGCCGGGACTTTCTGAAGGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: LMKLKSNTECVP*PTSRDFLKVDL
Trigger: CAGATCAACCTTCAGAAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTGTGTTACTCTTAAGTTTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGAGAAATAAGAACGGCTaGGCGCTGGGGTTCTGTATA +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTRNKNG*ALGFCI
Trigger: TATACAGAACCCCAGCGCTCAGCCGTTCTTATTTCT...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACAAACTGGAGTCAGACATaGGTTGTACCCTATTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTNWSQT*VVPYCP
Trigger: TGGGCAATAGGGTACAACTCATGTCTGACTCCAGTT...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCAGAAACAAAGTCAGTTaGACAAGCCCACAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFRNKVS*TSPQGN
Trigger: GTTCCCTTGTGGGCTTGTGCAACTGACTTTGTTTCT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGTTCTCTCTGCCTGAATaGGGATGGGAAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTFSLPE*GWENDR
Trigger: TCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAA...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR TCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACACTCAACAGTGTGTTCTaGGGCCATTTCTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTLNSVF*GHFSEQ
Trigger: TTGTTCTGAGAAATGGCCTCAGAACACACTGTTGAG...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCTTTCAGAGTTGTGTTTaGACGTCTGTCTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFFQSCV*TSVFPS
Trigger: TGATGGAAAGACAGACGTGCAAACACAACTCTGAAA...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGTTCTCAGTGTACTTTaGCTACACCTCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQVLSVL*LHLSSP
Trigger: TGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAAC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCAAGAAACAAAGGCCATaGAATGGACTTCCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFKKQRP*NGLPLF
Trigger: AAAAAGAGGAAGTCCATTGCATGGCCTTTGTTTCTT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACAGAATTTCCTTGGATTTaGTTCCAGAAAGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTEFPWI*FQKGRQ
Trigger: TTGTCTGCCTTTCTGGAACCAAATCCAAGGAAATTC...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp TCTGCTGCTTACAACAGTGCCTCGCTTACAGTAGATGATAAATCAACATTTACATGTATTTATGTATGTTaGCAGAGCAGGCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: SAAYNSASLTVDDKSTFTCIYVC*QSRPLL
Trigger: CAAAAGTGGCCTGCTCTGCCAACATACATAAATACA...TGTAAATGTTGATTTATCATCTACTGTAAGCGAGGCACTGTTGTAAGCAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR GCA 90 bp TATTTGGACAGGTTCAAAAATAGTCCTTCGACAATACAATCAGATCGAACCACGCCACGACAAGTAAAATaGAATTATGGGTTGGTTACA +
Preference number: 4 (lower is better)
Translates to: YLDRFKNSPSTIQSDRTTPRQVK*NYGLVT
Trigger: TGTAACCAACCCATAATTGCATTTTACTTGTCGTGG...CGTGGTTCGATCTGATTGTATTGTCGAAGGACTATTTTTGAACCTGTCCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CCA 90 bp AATGCCAAAGTCATTCACCTAAATGAGCTCAAAATACATATTGTTCTGGGCCAAGAATTTCCTTGGATTTaGTTCCAGAAAGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: NAKVIHLNELKIHIVLGQEFPWI*FQKGRQ
Trigger: TTGTCTGCCTTTCTGGAACCAAATCCAAGGAAATTC...TTGGCCCAGAACAATATGTATTTTGAGCTCATTTAGGTGAATGACTTTGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS GCA 90 bp GCGCTGCTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTGGGTGCTGTaGGTGCGAAGCATTCTGCAGGGCAGGCCGGGGTCCACGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ALLCGPFSRLPPWVL*VRSILQGRPGSTAP
Trigger: GGGCGCCGTGGACCCCGGCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 90 bp GCAGCGCGCTGCTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTGGGTaGTGTGCGTGCGAAGCATTCTGCAGGGCAGGCCGGGGTCCACGG +
Preference number: 5 (lower is better)
Translates to: AARCSAGPSRGCRRG*CACEAFCRAGRGPR
Trigger: CCGTGGACCCCGGCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 90 bp CAGCGAGGGAAGGGCGGGCATCGGTGTGCCCAGAAGGCAGCGCGCTaGTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTGGGTGCTGTGCG +
Preference number: 5 (lower is better)
Translates to: QRGKGGHRCAQKAAR*SAGPSRGCRRGCCA
Trigger: CGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTCTGGGCACACCGATGCCCGCCCTTCCCTCGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 90 bp AGGGAAGGGCGGGCATCGGTGTGCCCAGAAGGCAGCGCGCTGCTCTaGGGGCCCTTCTCGAGGCTGCCGCCGTGGGTGCTGTGCGTGCGA +
Preference number: 5 (lower is better)
Translates to: REGRASVCPEGSALL*GPFSRLPPWVLCVR
Trigger: TCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTCTGGGCACACCGATGCCCGCCCTTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS CCA 90 bp GAAGGCAGCGCGCTGCTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTaGGTGCTGTGCGTGCGAAGCATTCTGCAGGGCAGGCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: EGSALLCGPFSRLPP*VLCVRSILQGRPGS
Trigger: GGACCCCGGCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 90 bp TGTGCCCAGAAGGCAGCGCGCTGCTCTGCGGGCCCTTCTCGAGGCTaGCGCCGTGGGTGCTGTGCGTGCGAAGCATTCTGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CAQKAARCSAGPSRG*RRGCCACEAFCRAG
Trigger: GCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTCTGGGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 90 bp GATGCCAGGAAAGCGAGGAGCCAGGGAGTGGTGGAAAAGGCCGGCTaGCGGCTTCAGTGCCACACAGCTGCGCCTCTTCTTGCATGGTCC +
Preference number: 5 (lower is better)
Translates to: DARKARSQGVVEKAG*RLQCHTAAPLLAWS
Trigger: GGACCATGCAAGAAGAGGCGCAGCTGTGTGGCACTGAAGCCGGCAGCCGGCCTTTTCCACCACTCCCTGGCTCCTCGCTTTCCTGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS GCA 90 bp AAAGGCCGGCTGCCGGCTTCAGTGCCACACAGCTGCGCCTCTTCTTaGATGGTCCCTGTGATGACCTCACTCTTGCTTTGGTGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KGRLPASVPHSCASS*MVPVMTSLLLWCRD
Trigger: ATCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCAAGAAGAGGCGCAGCTGTGTGGCACTGAAGCCGGCAGCCGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CCA 90 bp TTGCATGGTCCCTGTGATGACCTCACTCTTGCTTTGGTGCAGAGATaGCTCCCCTACTCCCATCTCTCCAGCAGACATGGGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LHGPCDDLTLALVQR*LPYSHLSSRHGLAA
Trigger: TGCAGCCAGCCCATGTCTGCTGGAGAGATGGGAGTAGGGGAGCCATCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS-3UTR CAA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGCAGACTCTAAGCTCCTaGAAGGCAGAAGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QSRPLLGRHSFILASCALQTLSS*KAEACV
Trigger: GACACAGGCTTCTGCCTTCAAGGAGCTTAGAGTCTG...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTATGAGTTGTACCCTATaGCCCAGCCTCCCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSMSCTL*PSLPLH
Trigger: ATGGAGGGGGAGGCTGGGCAATAGGGTACAACTCAT...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CAGAGCAGGCCACTTTTGGGGCGCCACAGCTTTATCCTAGCATCCTGTGCCCTGACAGAATGTGTGCCTTaGCCAACAAGCCGGGACTTT +
Preference number: 5 (lower is better)
Translates to: QSRPLLGRHSFILASCALTECVP*PTSRDF
Trigger: AAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTGT...CAGGGCACAGGATGCTAGGATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp ACGCCTGAGGGGGCAAATGGGAAGGATACCCAACAACTGGTTTCAGGGGGTTCTGGAGTCAGACATGAGTaGTACCCTATTGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TPEGANGKDTQQLVSGGSGVRHE*YPIAQP
Trigger: AGGCTGGGCAATAGGGTACAACTCATGTCTGACTCC...AGAACCCCCTGAAACCAGTTGTTGGGTATCCTTCCCATTTGCCCCCTCAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS CCA 90 bp TGCAGAGATGGCTCCCCTACTCCCATCTCTCCAGCAGACATGGGCTaGCTGCAGGCAGCTGACGGTTTCAGCAGGTTTTTGACATATTTT +
Preference number: 5 (lower is better)
Translates to: CRDGSPTPISPADMG*LQAADGFSRFLTYF
Trigger: AAAATATGTCAAAAACCTGCTGAAACCGTCAGCTGCCTGCAGCCAGCCCATGTCTGCTGGAGAGATGGGAGTAGGGGAGCCATCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS-3UTR CAA 90 bp CAGGTGAGAACACACGAAGAGGTGCCACAGAAGGAAAGGCGCCTTAAGACATCAATGAGTTGTACCCTATaGCCCAGCCTCCCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: QVRTHEEVPQKERRLKTSMSCTL*PSLPLH
Trigger: ATGGAGGGGGAGGCTGGGCAATAGGGTACAACTCAT...TGATGTCTTAAGGCGCCTTTCCTTCTGTGGCACCTCTTCGTGTGTTCTCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CATCTAGCATCCCTGGTTCAAGTGAAACCACAGGAACAAACTCAGAGGGGCATCCAGAGCAGGCCACTTTaGGGGCGCCACAGCTTTATC +
Preference number: 5 (lower is better)
Translates to: HLASLVQVKPQEQTQRGIQSRPL*GRHSFI
Trigger: GATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG...GATGCCCCTCTGAGTTTGTTCCTGTGGTTTCACTTGAACCAGGGATGCTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp TTCAATGGAGTGGGCCATCCACACAGCCAGGATTCTTCCCCTGCTAATACAGCAATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FNGVGHPHSQDSSPANTAMKLQD*TSMEWA
Trigger: GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCAT...TGCTGTATTAGCAGGGGAAGAATCCTGGCTGTGTGGATGGCCCACTCCATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp TGGACTGTCTCAAGCTCTATGAAGCTGCAGGACTTGACTTCAATGGAGTGGGCCATGAAGCTGCAGGACTaGACTTCAATGGAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: WTVSSSMKLQDLTSMEWAMKLQD*TSMEWA
Trigger: GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCAT...GGCCCACTCCATTGAAGTCAAGTCCTGCAGCTTCATAGAGCTTGAGACAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS CCA 90 bp ATCTGGACTAGACAGAGGCTGGAACATCTGCAGGGATTTCTCGGGTaGACATCAATTACCAGGATTCTATCTTCACGACCGCATCCGCCA +
Preference number: 5 (lower is better)
Translates to: IWTRQRLEHLQGFLG*TSITRILSSRPHPP
Trigger: TGGCGGATGCGGTCGTGAAGATAGAATCCTGGTAATTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCTAGTCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS CCA 90 bp CCAAAACCAGTACCCTTCCTGTGGCTATCTGGACTAGACAGAGGCTaGAACATCTGCAGGGATTTCTCGGGTGGACATCAATTACCAGGA +
Preference number: 5 (lower is better)
Translates to: PKPVPFLWLSGLDRG*NICRDFSGGHQLPG
Trigger: TCCTGGTAATTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCTAGTCCAGATAGCCACAGGAAGGGTACTGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS GCA 90 bp GTACCCTTCCTGTGGCTATCTGGACTAGACAGAGGCTGGAACATCTaGAGGGATTTCTCGGGTGGACATCAATTACCAGGATTCTATCTT +
Preference number: 5 (lower is better)
Translates to: VPFLWLSGLDRGWNI*RDFSGGHQLPGFYL
Trigger: AAGATAGAATCCTGGTAATTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCTAGTCCAGATAGCCACAGGAAGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS-3UTR CAA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCCAGAGCAGGCCACTTTaGGGGCGCCACAGCTTTATC +
Preference number: 5 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFQSRPL*GRHSFI
Trigger: GATAAAGCTGTGGCGCCCCAAAAGTGGCCTGCTCTG...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CATCTGCAATCTTTTGAAATGGATGAGAGGATGACACTCACTAAAGGAGACAGCCAGACTCTAAGCTCCTaGAAGGCAGAAGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: HLQSFEMDERMTLTKGDSQTLSS*KAEACV
Trigger: GACACAGGCTTCTGCCTTCAAGGAGCTTAGAGTCTG...GCTGTCTCCTTTAGTGAGTGTCATCCTCTCATCCATTTCAAAAGATTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCAAGATCAAGTGTGCTTaGGGCCAGCCTCCGCTAAGG +
Preference number: 5 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFKIKCA*GQPPLR
Trigger: CCTTAGCGGAGGCTGGCCCAAAGCACACTTGATCTT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCACAGAATGTGTGCCTTaGCCAACAAGCCGGGACTTT +
Preference number: 5 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASTECVP*PTSRDF
Trigger: AAAGTCCCGGCTTGTTGGCAAAGGCACACATTCTGT...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCGGAGTCAGACATGAGTaGTACCCTATTGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFGVRHE*YPIAQP
Trigger: AGGCTGGGCAATAGGGTACAACTCATGTCTGACTCC...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp GGGGCATGTTATTCTTCTCTCTGCCTGAATGAGGATGGGAAAATGACAGAAAAAGTTGCTCCTTCTCCTTaGTTCTCAGTGTACTTTGCC +
Preference number: 5 (lower is better)
Translates to: GACYSSLCLNEDGKMTEKVAPSP*FSVYFA
Trigger: GGCAAAGTACACTGAGAACAAAGGAGAAGGAGCAAC...TTTTTCTGTCATTTTCCCATCCTCATTCAGGCAGAGAGAAGAATAACATGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCAAGAAACAAAGTCAGTaGCACAAGCCCACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASKKQSQ*HKPTRE
Trigger: TTCCCTTGTGGGCTTGTGCAACTGACTTTGTTTCTT...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp CTCAGAACAAAGGCATACTTCTGCATAAGGCAAATGCAGCCTGATAAAGCTTCCATGTATTTATGTATGTaGGCAGAGCAGGCCACTTTT +
Preference number: 5 (lower is better)
Translates to: LRTKAYFCIRQMQPDKASMYLCM*AEQATF
Trigger: AAAAGTGGCCTGCTCTGCCAACATACATAAATACAT...GGAAGCTTTATCAGGCTGCATTTGCCTTATGCAGAAGTATGCCTTTGTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS-3UTR CAA 90 bp TCCTTTGTTCTCAGTGTACTTTGCCTACACCTCTCTTCTCCATTAAAACACTTCATGTATTTATGTATGTaGGCAGAGCAGGCCACTTTT +
Preference number: 5 (lower is better)
Translates to: SFVLSVLCLHLSSPLKHFMYLCM*AEQATF
Trigger: AAAAGTGGCCTGCTCTGCCAACATACATAAATACAT...GAAGTGTTTTAATGGAGAAGAGAGGTGTAGGCAAAGTACACTGAGAACAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322753.7
ENST00000617872.4
CDS GCA 72 bp CGGGCATCGGTGTGCCCAGAAGGCAGCGCGCTGCTCTaGGGGCCCTTCTCGAGGCTGCCGCCGTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RASVCPEGSALL*GPFSRLPPWVL
Trigger: CAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTCTGGGCACACCGATGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 72 bp AAGGGCGGGCATCGGTGTGCCCAGAAGGCAGCGCGCTaGTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: KGGHRCAQKAAR*SAGPSRGCRRG
Trigger: CCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTTCTGGGCACACCGATGCCCGCCCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 72 bp TGCGGGCCCTTCTCGAGGCTGCCGCCGTGGGTGCTGTaGGTGCGAAGCATTCTGCAGGGCAGGCCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: CGPFSRLPPWVL*VRSILQGRPGS
Trigger: GGACCCCGGCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 72 bp TGCTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTGGGTaGTGTGCGTGCGAAGCATTCTGCAGGGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: CSAGPSRGCRRG*CACEAFCRAGR
Trigger: CCGGCCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS CCA 72 bp GCGCTGCTCTGCGGGCCCTTCTCGAGGCTGCCGCCGTaGGTGCTGTGCGTGCGAAGCATTCTGCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ALLCGPFSRLPP*VLCVRSILQGR
Trigger: CCTGCCCTGCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 72 bp AAGGCAGCGCGCTGCTCTGCGGGCCCTTCTCGAGGCTaGCGCCGTGGGTGCTGTGCGTGCGAAGCATTCTGC +
Preference number: 6 (lower is better)
Translates to: KAARCSAGPSRG*RRGCCACEAFC
Trigger: GCAGAATGCTTCGCACGCACAGCACCCACGGCGGCAGCCTCGAGAAGGGCCCGCAGAGCAGCGCGCTGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS CAA 90 bp GCTCTCCATCAGGGATGGGGTGGTCCCGGTGCTGTGCCTTCTCAGTaGCCGCTTCTAGGGAGGCCGCCTAGGAGCCAGCGAGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: ALHQGWGGPGAVPSQ*PLLGRPPRSQRGKG
Trigger: GCCCTTCCCTCGCTGGCTCCTAGGCGGCCTCCCTAGAAGCGGCAACTGAGAAGGCACAGCACCGGGACCACCCCATCCCTGATGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS CAA 72 bp CAGGGATGGGGTGGTCCCGGTGCTGTGCCTTCTCAGTaGCCGCTTCTAGGGAGGCCGCCTAGGAGCCAGCGA +
Preference number: 6 (lower is better)
Translates to: QGWGGPGAVPSQ*PLLGRPPRSQR
Trigger: TCGCTGGCTCCTAGGCGGCCTCCCTAGAAGCGGCAACTGAGAAGGCACAGCACCGGGACCACCCCATCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648702.1
CDS GCA 72 bp CAGGGAGTGGTGGAAAAGGCCGGCTGCCGGCTTCAGTaGCACACAGCTGCGCCTCTTCTTGCATGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: QGVVEKAGCRLQ*HTAAPLLAWSL
Trigger: CAGGGACCATGCAAGAAGAGGCGCAGCTGTGTGGCACTGAAGCCGGCAGCCGGCCTTTTCCACCACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CCA 72 bp GCTCTGATGCCAGGAAAGCGAGGAGCCAGGGAGTGGTaGAAAAGGCCGGCTGCCGGCTTCAGTGCCACACAG +
Preference number: 6 (lower is better)
Translates to: ALMPGKRGAREW*KRPAAGFSATQ
Trigger: CTGTGTGGCACTGAAGCCGGCAGCCGGCCTTTTCCACCACTCCCTGGCTCCTCGCTTTCCTGGCATCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CCA 72 bp GGCTCCCCTACTCCCATCTCTCCAGCAGACATGGGCTaGCTGCAGGCAGCTGACGGTTTCAGCAGGTTTTTG +
Preference number: 6 (lower is better)
Translates to: GSPTPISPADMG*LQAADGFSRFL
Trigger: CAAAAACCTGCTGAAACCGTCAGCTGCCTGCAGCCAGCCCATGTCTGCTGGAGAGATGGGAGTAGGGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CAA 90 bp AAAAGGCCGGCTGCCGGCTTCAGTGCCACACAGCTGCGCCTCTTCTaGCATGGTCCCTGTGATGACCTCACTCTTGCTTTGGTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: KRPAAGFSATQLRLF*HGPCDDLTLALVQR
Trigger: TCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCAAGAAGAGGCGCAGCTGTGTGGCACTGAAGCCGGCAGCCGGCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS GCA 72 bp CTGCCGGCTTCAGTGCCACACAGCTGCGCCTCTTCTTaGATGGTCCCTGTGATGACCTCACTCTTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: LPASVPHSCASS*MVPVMTSLLLW
Trigger: CCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCAAGAAGAGGCGCAGCTGTGTGGCACTGAAGCCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CCA 72 bp CCCTGTGATGACCTCACTCTTGCTTTGGTGCAGAGATaGCTCCCCTACTCCCATCTCTCCAGCAGACATGGG +
Preference number: 6 (lower is better)
Translates to: PCDDLTLALVQR*LPYSHLSSRHG
Trigger: CCCATGTCTGCTGGAGAGATGGGAGTAGGGGAGCCATCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACTATCTTCACGACCGCATCC +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTIFTTAS
Trigger: GGATGCGGTCGTGAAGATAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462646.5
CDS GCA 72 bp TGCATGGTCCCTGTGATGACCTCACTCTTGCTTTGGTaGAGAGATGGCTCCCCTACTCCCATCTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: CMVPVMTSLLLW*RDGSPTPISPA
Trigger: TGCTGGAGAGATGGGAGTAGGGGAGCCATCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CAA 72 bp TTCTTGCATGGTCCCTGTGATGACCTCACTCTTGCTTaGGTGCAGAGATGGCTCCCCTACTCCCATCTCTCC +
Preference number: 6 (lower is better)
Translates to: FLHGPCDDLTLA*VQRWLPYSHLS
Trigger: GGAGAGATGGGAGTAGGGGAGCCATCTCTGCACCAAAGCAAGAGTGAGGTCATCACAGGGACCATGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498642.5
CDS CCA 72 bp GTACCCTTCCTGTGGCTATCTGGACTAGACAGAGGCTaGAACATCTGCAGGGATTTCTCGGGTGGACATCAA +
Preference number: 6 (lower is better)
Translates to: VPFLWLSGLDRG*NICRDFSGGHQ
Trigger: TTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCTAGTCCAGATAGCCACAGGAAGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS GCA 72 bp CTGTGGCTATCTGGACTAGACAGAGGCTGGAACATCTaGAGGGATTTCTCGGGTGGACATCAATTACCAGGA +
Preference number: 6 (lower is better)
Translates to: LWLSGLDRGWNI*RDFSGGHQLPG
Trigger: TCCTGGTAATTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCTAGTCCAGATAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS CCA 72 bp AGACAGAGGCTGGAACATCTGCAGGGATTTCTCGGGTaGACATCAATTACCAGGATTCTATCTTCACGACCG +
Preference number: 6 (lower is better)
Translates to: RQRLEHLQGFLG*TSITRILSSRP
Trigger: CGGTCGTGAAGATAGAATCCTGGTAATTGATGTCCACCCGAGAAATCCCTGCAGATGTTCCAGCCTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467029.5
CDS CAA 90 bp ACTCACAGAAGTTGCTGTGCATTCACCATGGCTTCCCTTCAGTCTTaGCCAAGCCAGAGTATGAAATTATCAAGATGGACCAGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: THRSCCAFTMASLQS*PSQSMKLSRWTRCG
Trigger: ACCACACCTGGTCCATCTTGATAATTTCATACTCTGGCTTGGCAAAGACTGAAGGGAAGCCATGGTGAATGCACAGCAACTTCTGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479642.1
CDS CAA 90 bp CAGTACAGAAGTTGCTGTGCATTCACCATGGCTTCCCTTCAGTCTTaGCCAAGCCAGAGTATGAAATTATCAAGATGGACCAGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: QYRSCCAFTMASLQS*PSQSMKLSRWTRCG
Trigger: ACCACACCTGGTCCATCTTGATAATTTCATACTCTGGCTTGGCAAAGACTGAAGGGAAGCCATGGTGAATGCACAGCAACTTCTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481464.5
ENST00000486890.5
CDS GCA 72 bp TATAAGACAACCAAACAGAGAAGGACTCACAGAAGTTaGTGTGCATTCACCATGGCTTCCCTTCAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: YKTTKQRRTHRS*CAFTMASLQSL
Trigger: CAAAGACTGAAGGGAAGCCATGGTGAATGCACAGCAACTTCTGTGAGTCCTTCTCTGTTTGGTTGTCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479642.1
CDS CCA 72 bp ACGAGTGATTATAATAGTCATCGTACAGCAAACAGGTaGGAAAATAACCCTGGTGAACCCTGGAAGCAAAAC +
Preference number: 6 (lower is better)
Translates to: TSDYNSHRTANR*ENNPGEPWKQN
Trigger: GTTTTGCTTCCAGGGTTCACCAGGGTTATTTTCCCACCTGTTTGCTGTACGATGACTATTATAATCACTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479642.1