RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICALL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100139

Ensembl transcript IDs: ENST00000215957.10, ENST00000402631.1, ENST00000424008.2, ENST00000445494.6, ENST00000454685.6, ENST00000489812.1, ENST00000679832.1, ENST00000680375.1, ENST00000680501.1, ENST00000680578.1, ENST00000680868.1, ENST00000681920.1

Found 1110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTG +
Preference number: 1 (lower is better)
Translates to: AGALRRQALHAERWR*CGRGRLRVREAGGV
Trigger: CACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 90 bp AGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGA +
Preference number: 1 (lower is better)
Translates to: SLAGALRRQALHAER*RWCGRGRLRVREAG
Trigger: TCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 90 bp CACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGA +
Preference number: 1 (lower is better)
Translates to: HLQSGWRSQTTGSPR*ALAMVWPRAAPSAR
Trigger: TCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 90 bp AGCGCTGCACCAAGTGCACATGCTGCTGGCAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: SAAPSAHAAGRLRTC*WGSGRCPALTGCLR
Trigger: CCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCAGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp GGTAGCGCTGCACCAAGTGCACATGCTGCTGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: GSAAPSAHAAGRLRT*CWGSGRCPALTGCL
Trigger: CAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCAGCGCTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp AAGTGCACATGCTGCTGGCAGGCTGCGCACGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGACAGGCTGCCTGAGGAGAGCTCCTCG +
Preference number: 1 (lower is better)
Translates to: KCTCCWQAAHVLLGV*PVPCSDRLPEESSS
Trigger: CGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp AGAAGGGCCCAGGCCTGGTCCCCGACCGTGTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACACAAAGGTGCCCTCCTCAGGCCCAT +
Preference number: 1 (lower is better)
Translates to: RRAQAWSPTVSPGPA*HSVLHTQRCPPQAH
Trigger: ATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR TCA 90 bp CTTGGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGTCCCCGACCGTGTCCCCGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: LGIFCELLLVLLLWL*EGPRPGPRPCPRAQ
Trigger: CTGGGCCCGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp CGCACGTGCTGCTGGGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGCCCTGAGCCACATCTTCTGGTTCCA +
Preference number: 1 (lower is better)
Translates to: RTCCWGSGRCPALTG*LRRAPRPEPHLLVP
Trigger: TGGAACCAGAAGATGTGGCTCAGGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp CTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGC +
Preference number: 1 (lower is better)
Translates to: LLGTAGGSRSSAPAV*LALSDDRLSTLSAG
Trigger: GCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 90 bp TGCTGGAGCACCGCCGACACCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACATGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: CWSTADTGSSGDGTA*RQPGSAAPSAHAAG
Trigger: GCCAGCAGCATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCGGCGGTGCTCCAGCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp CCTGGTCCCCGACCGTGTCCCCGGGCCCAGCCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTCCTCAGGCCCATTCTCATAAGCCCC +
Preference number: 1 (lower is better)
Translates to: PGPRPCPRAQPGTVF*THKGALLRPILISP
Trigger: GGGGCTTATGAGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACACGGTCGGGGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp GCCGAGGAGCCACCTCTCCCTGCAGAGGAAAGGGATCCTGCCCAGTaGCAGGCGGTGAGGGCAGAGATCCCTCTTGGAGGATGGCCCCAA +
Preference number: 1 (lower is better)
Translates to: AEEPPLPAEERDPAQ*QAVRAEIPLGGWPQ
Trigger: TTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTCACCGCCTGCCACTGGGCAGGATCCCTTTCCTCTGCAGGGAGAGGTGGCTCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR TCA 90 bp GCTGACAGGGTTTCCAGGGGTACCAGGGGCATGGACAGCAGGCTCTaGGGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACC +
Preference number: 1 (lower is better)
Translates to: ADRVSRGTRGMDSRL*GALGHSWRLQKLCT
Trigger: GGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 90 bp GTGTCCCCGGGCCCAGCCTGGCACAGTGTTCTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCTCATAAGCCCCAGGGAGCAGGGTGC +
Preference number: 1 (lower is better)
Translates to: VSPGPAWHSVLHTQR*PPQAHSHKPQGAGC
Trigger: GCACCCTGCTCCCTGGGGCTTATGAGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp GGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTaGTGCTGCTGCTTTGGCTGTGAGAAGGGCCCAGGCCTGGTCCCC +
Preference number: 1 (lower is better)
Translates to: GPPPGTSLASSASCC*CCCFGCEKGPGLVP
Trigger: GGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp TGGCCTTGGGTCCATCGGCCTCAGCCCCTGCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCT +
Preference number: 1 (lower is better)
Translates to: WPWVHRPQPLQEHWS*GRLLEHPWHLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGATGGACCCAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp AGCCGTGTCCAGGGGCAGGTGGCCTCACTGGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGT +
Preference number: 1 (lower is better)
Translates to: SRVQGQVASLAWIPW*PSLWLGTLQVMASG
Trigger: ACCGGAAGCCATCACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 90 bp CACCTCTCCCTGCAGAGGAAAGGGATCCTGCCCAGTGGCAGGCGGTaGGGGCAGAGATCCCTCTTGGAGGATGGCCCCAACATGGCCTCT +
Preference number: 1 (lower is better)
Translates to: HLSLQRKGILPSGRR*GQRSLLEDGPNMAS
Trigger: AGAGGCCATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTCACCGCCTGCCACTGGGCAGGATCCCTTTCCTCTGCAGGGAGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 90 bp CCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAGAAGGGCCCAGGCCTGGTCCCCGAC +
Preference number: 1 (lower is better)
Translates to: PPPGTSLASSASCCW*CCFGCEKGPGLVPD
Trigger: GTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp CTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGCTGTGAGAAGGGCCCAGGCCTGGTC +
Preference number: 1 (lower is better)
Translates to: LGPPPGTSLASSASC*WCCCFGCEKGPGLV
Trigger: GACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp GAGCTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTaGTGCTGGTGCTGCTGCTTTGGCTGTGAGAAGGGCCCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: ELGPPPGTSLASSAS*CWCCCFGCEKGPGL
Trigger: CAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp GCAGGCGGTGAGGGCAGAGATCCCTCTTGGAGGATGGCCCCAACATaGCCTCTGGGCGACCAGAGATGTTCAGCCACCAGGTGTGGCAGA +
Preference number: 1 (lower is better)
Translates to: AGGEGRDPSWRMAPT*PLGDQRCSATRCGR
Trigger: TCTGCCACACCTGGTGGCTGAACATCTCTGGTCGCCCAGAGGCCATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTCACCGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp CCCCTGCAGGAGCACTGGAGCTGGGGCCGCCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTGCTTTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: PLQEHWSWGRLLEHP*HLLRVAAGAAALAV
Trigger: CACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp CTTCCTCCTTGTCCTCCTCCTCCTCCTCAAAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTGGGCTCGGCTGGGCCACCTCCTCGG +
Preference number: 1 (lower is better)
Translates to: LPPCPPPPPQRGYRV*TPGWPLGSAGPPPR
Trigger: CCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACAAGGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp GAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAGCTCTTGGGCACAGCTGGCGGCTCC +
Preference number: 1 (lower is better)
Translates to: ELVERLTGFPGVPGA*TAGSEELLGTAGGS
Trigger: GGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 90 bp GGCGGTCCCCATCACTCCTCCTCTCCCATAGCCATCCCAGAGGGGTaGGTAGCCATCAGGCCTTCGGTGGGAGGGAGTCAGGGAAAGAAC +
Preference number: 1 (lower is better)
Translates to: GGPHHSSSPIAIPEG*VAIRPSVGGSQGKN
Trigger: GTTCTTTCCCTGACTCCCTCCCACCGAAGGCCTGATGGCTACTCACCCCTCTGGGATGGCTATGGGAGAGGAGGAGTGATGGGGACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 90 bp CCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTaGTTTGGCTGTGAGAAGGGCCCAGGCCTGGTCCCCGACCGTGTC +
Preference number: 1 (lower is better)
Translates to: PGTSLASSASCCWCC*FGCEKGPGLVPDRV
Trigger: GACACGGTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 90 bp CCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAGGGCCCAGGCCTGGTCCCCGACCGT +
Preference number: 1 (lower is better)
Translates to: PPGTSLASSASCCWC*CFGCEKGPGLVPDR
Trigger: ACGGTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 90 bp AGGGAGGCTCCCTGTGGAGTAAGGGGAGACGAGGGAAGCCGCTCCTaGAACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCAT +
Preference number: 1 (lower is better)
Translates to: REAPCGVRGDEGSRS*NCEGERDGFARQAH
Trigger: ATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTTCCAGGAGCGGCTTCCCTCGTCTCCCCTTACTCCACAGGGAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp GTGAGGGCAGAGATCCCTCTTGGAGGATGGCCCCAACATGGCCTCTaGGCGACCAGAGATGTTCAGCCACCAGGTGTGGCAGAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: VRAEIPLGGWPQHGL*ATRDVQPPGVAEAG
Trigger: ACCTGCCTCTGCCACACCTGGTGGCTGAACATCTCTGGTCGCCCAGAGGCCATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp TCCAGGTCAACAGGCATGTTTAGAAGGAGCCTGCCAGGGGCTGCATaGCCGAGGAGCCACCTCTCCCTGCAGAGGAAAGGGATCCTGCCC +
Preference number: 1 (lower is better)
Translates to: SRSTGMFRRSLPGAA*PRSHLSLQRKGILP
Trigger: GGGCAGGATCCCTTTCCTCTGCAGGGAGAGGTGGCTCCTCGGCCATGCAGCCCCTGGCAGGCTCCTTCTAAACATGCCTGTTGACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp CGTCAGAGCTGTCACTCGGGTTCATGCGTGTTACCTGTCTGGCCCTaGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGC +
Preference number: 1 (lower is better)
Translates to: RQSCHSGSCVLPVWP*KGPGVGGASSRSTG
Trigger: GCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAACCCGAGTGACAGCTCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp ACAGCCCGTCAGAGCTGTCACTCGGGTTCATGCGTGTTACCTGTCTaGCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: TARQSCHSGSCVLPV*PWKGPGVGGASSRS
Trigger: TGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAACCCGAGTGACAGCTCTGACGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp GCGTTTGATGAGTGGAAAGCCGTGTCCAGGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGCCTTCTTTGTGGCTGGGGACGCTGC +
Preference number: 1 (lower is better)
Translates to: AFDEWKAVSRGRWPH*LGSLGGLLCGWGRC
Trigger: GCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTCATCAAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 90 bp GCAGACAGACCAGTGATGACCATGGGCGGGAGCGAGCCTCTTCCCTaGACCGGGGTGGCAGAGGAAAGCCTAAGTGAGGGGTCAGACTAT +
Preference number: 1 (lower is better)
Translates to: ADRPVMTMGGSEPLP*TGVAEESLSEGSDY
Trigger: ATAGTCTGACCCCTCACTTAGGCTTTCCTCTGCCACCCCGGTCCAGGGAAGAGGCTCGCTCCCGCCCATGGTCATCACTGGTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 90 bp TCTCCTGACACCGAAACAGCCCGTCAGAGCTGTCACTCGGGTTCATaGGTGTTACCTGTCTGGCCCTGGAAAGGCCCTGGAGTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: SPDTETARQSCHSGS*VLPVWPWKGPGVGG
Trigger: GCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAACCCGAGTGACAGCTCTGACGGGCTGTTTCGGTGTCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp CTGGACCTTGCGTTTGATGAGTGGAAAGCCGTGTCCAGGGGCAGGTaGCCTCACTGGCTTGGATCCCTTGGTGGCCTTCTTTGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: LDLAFDEWKAVSRGR*PHWLGSLGGLLCGW
Trigger: CCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTCATCAAACGCAAGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 90 bp GAGGCAGGTGGGAAGGCAAACAAGGCTGCCGCTGTGGCCCGAGGCTaGAGGGCACTGGCAGTTGAGGTTGTCTGTTTATTGGTGAGGAAA +
Preference number: 1 (lower is better)
Translates to: EAGGKANKAAAVARG*RALAVEVVCLLVRK
Trigger: TTTCCTCACCAATAAACAGACAACCTCAACTGCCAGTGCCCTGCAGCCTCGGGCCACAGCGGCAGCCTTGTTTGCCTTCCCACCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 90 bp TGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGT +
Preference number: 1 (lower is better)
Translates to: CSRASSRRSMVSISP*MSSSGMYWSAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 90 bp AGTGCTTTGACCAAGAGCTGCTGGGCACATTTCCTGCAGAAAAGGTaGCGGTCCCCATCACTCCTCCTCTCCCATAGCCATCCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: SALTKSCWAHFLQKR*RSPSLLLSHSHPRG
Trigger: CCCTCTGGGATGGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTGCCCAGCAGCTCTTGGTCAAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR TCA 90 bp CTTGGATCCCTTGGTGGCCTTCTTTGTGGCTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGAGGACTTTAC +
Preference number: 1 (lower is better)
Translates to: LGSLGGLLCGWGRCR*WLPVKRILLAGGLY
Trigger: GTAAAGTCCTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 90 bp AAACAAGGCTGCCGCTGTGGCCCGAGGCTGCAGGGCACTGGCAGTTaGGGTTGTCTGTTTATTGGTGAGGAAACTCCTCGAGAGTTAATA +
Preference number: 1 (lower is better)
Translates to: KQGCRCGPRLQGTGS*GCLFIGEETPRELI
Trigger: TATTAACTCTCGAGGAGTTTCCTCACCAATAAACAGACAACCTCAACTGCCAGTGCCCTGCAGCCTCGGGCCACAGCGGCAGCCTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR TCA 90 bp TGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGA +
Preference number: 1 (lower is better)
Translates to: WHHVCFLAVSTSSWS*TSPSSCPQVQPPSG
Trigger: TCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR TCA 90 bp ATTTACAAATTACACACACATAAAATCTGGATTTCTAGCTTCTTATaGCAAAGGATCTGGCAACACCGGGCCCACATTCAGCCCCACAGG +
Preference number: 1 (lower is better)
Translates to: IYKLHTHKIWISSFL*QRIWQHRAHIQPHR
Trigger: CCTGTGGGGCTGAATGTGGGCCCGGTGTTGCCAGATCCTTTGTCATAAGAAGCTAGAAATCCAGATTTTATGTGTGTGTAATTTGTAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp CTCCAGGCTGGCCGTTGGGCTCGGCTGGGCCACCTCCTCGGTGCCTCCATTCTCAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 2 (lower is better)
Translates to: LQAGRWARLGHLLGASILRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...GAGAATGGAGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp GAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCTCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ERWRWCGRGRLRVREAGGSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...GCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 2 (lower is better)
Translates to: ASGDALGARGAGRFFVLGSPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp TGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGAGCCAGTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WCGRGRLRVREAGGVESQSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...CTGGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CTCCAGGCTGGCCGTTGGGCTCGGCTGGGCCACCTCCTCGGTGCCTCCATTCTCGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 2 (lower is better)
Translates to: LQAGRWARLGHLLGASILGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...GAGAATGGAGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp GGGCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GLLSPTNKRGVGVAPLQGIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...GCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: CTCSLAGALRRQALHAERGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 2 (lower is better)
Translates to: APAVWLALSDDRLSTLSARGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAGCACAGCCCAGGAGCTaGTCCAGGAGGGGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSAQPRS*SRRGQS
Trigger: GGACTGCCCCCTCCTGGAGCAGCTCCTGGGCTGTGC...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
3UTR-3UTR GCA 90 bp GAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 2 (lower is better)
Translates to: ERWRWCGRGRLRVREAGGCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...GCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 2 (lower is better)
Translates to: GQGGVGREADRVSRGTRGRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGCACAGCCCAGGAGCTaGTCCAGGAGGGGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: QNCSLGTALGAANRALTCAQPRS*SRRGQS
Trigger: GGACTGCCCCCTCCTGGAGCAGCTCCTGGGCTGTGC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp CACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGAGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: HGAPGHPAGAQWYPSLHGVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CAA 90 bp GAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAGGCCTGGTCCCCGACCGTGTCCCCG +
Preference number: 2 (lower is better)
Translates to: EHPWHLLRVAAGAAA*AVRRAQAWSPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CAA 90 bp GCCCCTGCAGGAGCACTGGAGCTGGGGCCGCCTCCTGGAACATCCTaGGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTGCTTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: APAGALELGPPPGTS*ASSASCCWCCCFGC
Trigger: ACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTGCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR TCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCTTCCTCCTGACTaGTCTGAGGGGAGCAGGGCG +
Preference number: 2 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSHLPPD*SEGSRA
Trigger: CGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGATG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
3UTR-3UTR GCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 2 (lower is better)
Translates to: ELEPVHQHVILTALIQAAPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp GAGCCTCTTCCTCCTTGTCCTCCTCCTCCTCCTCAAAGGGGTTATAGGGTTTGGTCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: EPLPPCPPPPPQRGYRVWSPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...CCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACAAGGAGGAAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CAA 90 bp TTGATGAGTGGAAAGCCGTGTCCAGGGGCAGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTCTTTGTGGCTGGGGACGCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LMSGKPCPGAGGLTG*DPLVAFFVAGDAAG
Trigger: ACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGCAGTCAGAGGTCCCTaGGGAGGAAGAGGCCATCAC +
Preference number: 2 (lower is better)
Translates to: QNCSLGTALGAANRALTCAVRGP*GGRGHH
Trigger: GTGATGGCCTCTTCCTCCTCAGGGACCTCTGACTGC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGGGCTGAATCACCGCTaGCTGGGGCTCGGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: QNCSLGTALGAANRALTCGLNHR*LGLGEE
Trigger: TTCTTCTCCGAGCCCCAGGCAGCGGTGATTCAGCCC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp ACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 2 (lower is better)
Translates to: TVLQGIQPALNGIHLSMDRKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...ATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 2 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CAA 90 bp CGGGTTCATGCGTGTTACCTGTCTGGCCCTGGAAAGGCCCTGGAGTaGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTTAGAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: RVHACYLSGPGKALE*VAPAPGQQACLEGA
Trigger: GGCTCCTTCTAAACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTGGCCCAGCGCCACTTaGTGGCCTGCCTGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNWPSAT*WPAWKS
Trigger: GCTCTTCCAGGCAGGCCAGCAAGTGGCGCTGGGCCA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp GGGCTGCTGGTAGGGGTGATGCCGTACCAGGGGTGCAGGGACTTGGGTGTGGACATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: GLLVGVMPYQGCRDLGVDMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...GTCCACACCCAAGTCCCTGCACCCCTGGTACGGCATCACCCCTACCAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 2 (lower is better)
Translates to: CTCSLAGALRRQALHAERLLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACGCAGGCGCCCCTCCCTaGACCCTGGGACCCTATTTG +
Preference number: 2 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNAGAPP*TLGPYL
Trigger: CAAATAGGGTCCCAGGGTCCAGGGAGGGGCGCCTGC...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTCGCAGCCCTGGTCCTaGCAAGGGAGGCTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNSQPWS*QGRLPV
Trigger: CACAGGGAGCCTCCCTTGCCAGGACCAGGGCTGCGA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CCA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCAGGCCCATTCACGTCTaGCAGTACAGGCCACTCAGT +
Preference number: 2 (lower is better)
Translates to: QNCSLGTALGAANRALTCRPIHV*QYRPLS
Trigger: ACTGAGTGGCCTGTACTGTCAGACGTGAATGGGCCT...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR TCA 90 bp GCCACGCAGCTTCTCCTCCAGCAGCACCCCACGGTGCTCCAGGGCATCCAGCCGGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 2 (lower is better)
Translates to: ATQLLLQQHPTVLQGIQPGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...CGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCAGAGAGGGATGGATTTaGCCGTCAGGCCCATTCACG +
Preference number: 2 (lower is better)
Translates to: QNCSLGTALGAANRALTCREGWI*PSGPFT
Trigger: CGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCT...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR GCA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGACTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCT +
Preference number: 2 (lower is better)
Translates to: HGAPGHPAGAQWYPSLHGLHTQR*PPQAHS
Trigger: AGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAG...TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTCGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTRLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGAGGGAAGCCGCTCCTaGAACTGTGAGGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAEGSRS*NCEGER
Trigger: CCTCTCTCCCTCACAGTTCCAGGAGCGGCTTCCCTC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 2 (lower is better)
Translates to: CTCSLAGALRRQALHAERWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp CTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 2 (lower is better)
Translates to: LLGTAGGSRSSAPAVWLAWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...CGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 2 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACCATCTTCCTCCTGACTaGTCTGAGGGGAGCAGGGCG +
Preference number: 2 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNHLPPD*SEGSRA
Trigger: CGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGATG...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR TCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCCCGCTCCTGGAACTGTaGGGGAGAGAGGGATGGATT +
Preference number: 2 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAPLLEL*GREGWI
Trigger: AATCCATCCCTCTCTCCCTCACAGTTCCAGGAGCGG...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR TCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACACTGAGTGAGGGAAACTaGGATCCAAGGGCGCCTGCA +
Preference number: 2 (lower is better)
Translates to: NCEGERDGFARQAHSRLTLSEGN*DPRAPA
Trigger: TGCAGGCGCCCTTGGATCTCAGTTTCCCTCACTCAG...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR TCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp TCATCCTCACGGCCCTCATTCAGGCCGCCACGCAGCTTCTCCTCCAGCAGCACCACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SSSRPSFRPPRSFSSSSTTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...GGTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATAACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 2 (lower is better)
Translates to: LILDISLALLQVLLLEDITKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGTGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACACACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp AGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACAAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: SSYSTSAWRCSRFCCLKTSCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...TGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACACAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 2 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: ELPLLLALRFSLPLELFLMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR TCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CAA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTaGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LASRLFPSSFNIFMV*NFPFFLPSGSASLW
Trigger: CCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR GCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 2 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 2 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR-3UTR TCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 2 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR GCA 72 bp GCTGCGCACGTGCTGCTGGGGGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAGGAGAGCTCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: AAHVLLGVWPVP*SDRLPEESSSP
Trigger: GGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR TCA 72 bp TCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCG +
Preference number: 3 (lower is better)
Translates to: SGWRSQTTGSPR*ALAMVWPRAAP
Trigger: CGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp TGCTGCTGGCAGGCTGCGCACGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGACAGGCTGCCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: CCWQAAHVLLGV*PVPCSDRLPEE
Trigger: CTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp CTCAGACGACAGGCTCTCCACGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCG +
Preference number: 3 (lower is better)
Translates to: LRRQALHAERWR*CGRGRLRVREA
Trigger: CGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp GGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGA +
Preference number: 3 (lower is better)
Translates to: GALRRQALHAER*RWCGRGRLRVR
Trigger: TCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 72 bp CCAAGTGCACATGCTGCTGGCAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGCCCTGCTCTGACAGGC +
Preference number: 3 (lower is better)
Translates to: PSAHAAGRLRTC*WGSGRCPALTG
Trigger: GCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp GCACCAAGTGCACATGCTGCTGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGGTGCCCTGCTCTGACA +
Preference number: 3 (lower is better)
Translates to: APSAHAAGRLRT*CWGSGRCPALT
Trigger: TGTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp CACCGGGCTCCTGTCTCCAACCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGGCTTGGCTGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: HRAPVSNQQERR*GGATAGLGWLG
Trigger: CCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGCCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp CTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 3 (lower is better)
Translates to: LSAGDGVAEGGSECERRESSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...CTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 72 bp TGCTGGGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGCCCTGAGCCACATCTT +
Preference number: 3 (lower is better)
Translates to: CWGSGRCPALTG*LRRAPRPEPHL
Trigger: AAGATGTGGCTCAGGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp GTGTCCCCTCGGACGGCTTCGGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCAGTCTCCCGTTCACCA +
Preference number: 3 (lower is better)
Translates to: VSPRTASVSPSA*GQAVRAVSRSP
Trigger: TGGTGAACGGGAGACTGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACCGAAGCCGTCCGAGGGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR TCA 72 bp TTCTGCGAGTTGCTGCTGGTGCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGTCCCCGACCGTGTCCC +
Preference number: 3 (lower is better)
Translates to: FCELLLVLLLWL*EGPRPGPRPCP
Trigger: GGGACACGGTCGGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp CCTCAGGCCCATTCTCATAAGCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACCGGAAGCAGTGGCGAT +
Preference number: 3 (lower is better)
Translates to: PQAHSHKPQGAG*WSTADTGSSGD
Trigger: ATCGCCACTGCTTCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCTTATGAGAATGGGCCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp CGACCGTGTCCCCGGGCCCAGCCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTCCTCAGGCCCATTCTC +
Preference number: 3 (lower is better)
Translates to: RPCPRAQPGTVF*THKGALLRPIL
Trigger: GAGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGACACGGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp CTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LGHSWRLQKLCT*SLAGALRRQAL
Trigger: GAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 72 bp GGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGCGCTCTCAGACGACAG +
Preference number: 3 (lower is better)
Translates to: GALGHSWRLQKL*TCSLAGALRRQ
Trigger: CTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp ACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTG +
Preference number: 3 (lower is better)
Translates to: TAGGSRSSAPAV*LALSDDRLSTL
Trigger: CAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 72 bp CTGCAGAGGAAAGGGATCCTGCCCAGTGGCAGGCGGTaGGGGCAGAGATCCCTCTTGGAGGATGGCCCCAAC +
Preference number: 3 (lower is better)
Translates to: LQRKGILPSGRR*GQRSLLEDGPN
Trigger: GTTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTCACCGCCTGCCACTGGGCAGGATCCCTTTCCTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 72 bp ACCGCCGACACCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACAT +
Preference number: 3 (lower is better)
Translates to: TADTGSSGDGTA*RQPGSAAPSAH
Trigger: ATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCGGCGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp GCAGTTCGTGCAGTCTCCCGTTCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGTTCTCCTGCTGCAGAC +
Preference number: 3 (lower is better)
Translates to: AVRAVSRSPGCC*QPAPPGSPAAD
Trigger: GTCTGCAGCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGAGACTGCACGAACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp CAGGCAGTTCGTGCAGTCTCCCGTTCACCAGGCTGCTaGTGCCAGCCTGCTCCACCAGGTTCTCCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: QAVRAVSRSPGC*CQPAPPGSPAA
Trigger: TGCAGCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGAGACTGCACGAACTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp AGCCCCTGCAGGAGCACTGGAGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SPCRSTGAGAAS*NILGIFCELLL
Trigger: CAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CAA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 3 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: CTCSLAGALRRQALHAERNFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 3 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR-3UTR CAA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGCAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 3 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR GCA 72 bp TCCTTGGCATCTTCTGCGAGTTGCTGCTGGTGCTGCTaGTTTGGCTGTGAGAAGGGCCCAGGCCTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: SLASSASCCWCC*FGCEKGPGLVP
Trigger: GGGGACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp GAGGGCAGAGATCCCTCTTGGAGGATGGCCCCAACATaGCCTCTGGGCGACCAGAGATGTTCAGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: EGRDPSWRMAPT*PLGDQRCSATR
Trigger: CCTGGTGGCTGAACATCTCTGGTCGCCCAGAGGCCATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 72 bp TGTCACTCGGGTTCATGCGTGTTACCTGTCTGGCCCTaGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: CHSGSCVLPVWP*KGPGVGGASSR
Trigger: CCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAACCCGAGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CCA 72 bp TGTCCTCCTCCTCCTCCTCAAAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTGGGCTCGGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: CPPPPPQRGYRV*TPGWPLGSAGP
Trigger: TGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp GAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAGCTCTTGGGCACAGCT +
Preference number: 3 (lower is better)
Translates to: ERLTGFPGVPGA*TAGSEELLGTA
Trigger: AGCTGTGCCCAAGAGCTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp GAGTGGAAAGCCGTGTCCAGGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGCCTTCTTTGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: EWKAVSRGRWPH*LGSLGGLLCGW
Trigger: CCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp CCCCACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGATGTCCTCCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: PHGAPGHPAGAQ*YPSLHGCPPQG
Trigger: TCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp AACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGCTGGCTGGGGACCTCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 3 (lower is better)
Translates to: NKRGVGVAPLQGLAGWGPQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...AGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp GAGATCCCTCTTGGAGGATGGCCCCAACATGGCCTCTaGGCGACCAGAGATGTTCAGCCACCAGGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: EIPLGGWPQHGL*ATRDVQPPGVA
Trigger: TGCCACACCTGGTGGCTGAACATCTCTGGTCGCCCAGAGGCCATGTTGGGGCCATCCTCCAAGAGGGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 72 bp GGGAAGGCAAACAAGGCTGCCGCTGTGGCCCGAGGCTaGAGGGCACTGGCAGTTGAGGTTGTCTGTTTATTG +
Preference number: 3 (lower is better)
Translates to: GKANKAAAVARG*RALAVEVVCLL
Trigger: CAATAAACAGACAACCTCAACTGCCAGTGCCCTGCAGCCTCGGGCCACAGCGGCAGCCTTGTTTGCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR GCA 72 bp GGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAGAAGGGCCCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: GTSLASSASCCW*CCFGCEKGPGL
Trigger: CAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR GCA 72 bp CCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTaGTGCTGGTGCTGCTGCTTTGGCTGTGAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: PPPGTSLASSAS*CWCCCFGCEKG
Trigger: GCCCTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
3UTR CCA 72 bp TTCATGCGTGTTACCTGTCTGGCCCTGGAAAGGCCCTaGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCAT +
Preference number: 3 (lower is better)
Translates to: FMRVTCLALERP*SWWRQLQVNRH
Trigger: ATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAACACGCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CAA 90 bp GCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 3 (lower is better)
Translates to: APVSNQQERRWGGATAGLQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...AAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp GCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: ASSRRSMVSISP*MSSSGMYWSAW
Trigger: CCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 3 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 3 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CCA 72 bp ACCAAGAGCTGCTGGGCACATTTCCTGCAGAAAAGGTaGCGGTCCCCATCACTCCTCCTCTCCCATAGCCAT +
Preference number: 3 (lower is better)
Translates to: TKSCWAHFLQKR*RSPSLLLSHSH
Trigger: ATGGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTGCCCAGCAGCTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CAA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGTCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMSFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR TCA 72 bp AAGACTTCAGAAACAGAGTTCCTGAGTGAGGGAAACTaGGATCCAAGGGCGCCTGCACAGGACAGGAAGACA +
Preference number: 3 (lower is better)
Translates to: KTSETEFLSEGN*DPRAPAQDRKT
Trigger: TGTCTTCCTGTCCTGTGCAGGCGCCCTTGGATCTCAGTTTCCCTCACTCAGGAACTCTGTTTCTGAAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR TCA 72 bp GTGAGGGGTCAGACTATAAACGTTAAGGAACCGAGATaGGCACCTGCTTCAAGTGCACCCTTCCTACCTGAC +
Preference number: 3 (lower is better)
Translates to: VRGQTINVKEPR*APASSAPFLPD
Trigger: GTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATCTCGGTTCCTTAACGTTTATAGTCTGACCCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CAA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 3 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACACTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR TCA 72 bp AACTTAACTGAAGACTTCAGAAACAGAGTTCCTGAGTaGGGGAAACTGAGATCCAAGGGCGCCTGCACAGGA +
Preference number: 3 (lower is better)
Translates to: NLTEDFRNRVPE*GKLRSKGACTG
Trigger: TCCTGTGCAGGCGCCCTTGGATCTCAGTTTCCCTCACTCAGGAACTCTGTTTCTGAAGTCTTCAGTTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR-3UTR CAA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 3 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
3UTR-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 3 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSAGDGVAEGGSECERREEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...CTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: HAERWRWCGRGRLRVREAGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...CGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGAGCCTCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DGVAEGGSECERREAWRASPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...GGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp CACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HAERWRWCGRGRLRVREAAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...CGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGAGCCTTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DGVAEGGSECERREAWRALGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...GGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GACAGGCTCTCCACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: DRLSTLSAGDGVAEGGSEALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...CTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ERWRWCGRGRLRVREAGGREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...GCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AGCCCCAGGGAGCAGGGTGCTGGAGCACCGCCGACACCGGAAGCAGTGGCGATGAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SPREQGAGAPPTPEAVAMRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...CATCGCCACTGCTTCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CCAGGAACCCGGGGCTTGGTAGGGATCTGCGGCCGGGCCTCAGGGCTGGCCTTGAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PGTRGLVGICGRASGLALSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...CAAGGCCAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGCGTCCCGGAAGGAGCTaGTCAGGTCGCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LSAGDGVAEGGSECERRERPGRS*SGRGSP
Trigger: TGGAGATCCGCGACCTGAGCAGCTCCTTCCGGGACG...CTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCGACACCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: ASGDALGARGAGRFFVLGRHRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCG...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp CACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: HAERWRWCGRGRLRVREASPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...CGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp GGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTGCCTGAGGAGAGCTCCTCGCCCGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: GVWPVPCSDRLPEESSSPVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...GGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASGDALGARGAGRFFVLGGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
70% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGCCCCAGGGAGCAGGGTGCTGGAGCACCGCCGACACCGGAAGCAGTGGCGATGCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPREQGAGAPPTPEAVAMRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...CATCGCCACTGCTTCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp TGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WRWCGRGRLRVREAGGVEGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...CTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGAGCCAGTGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: WCGRGRLRVREAGGVESQCTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...CTGGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ERWRWCGRGRLRVREAGGPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...GCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCATCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPSPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPLQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GGGCTGCTGGTAGGGGTGATGCCGTACCAGGGGTGCAGGGACTTGGGTGTGGACGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GLLVGVMPYQGCRDLGVDALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...GTCCACACCCAAGTCCCTGCACCCCTGGTACGGCATCACCCCTACCAGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLSPTNKRGVGVAPLQGAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...GCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
3UTR CAA 72 bp CTGGCCAGCTCCTGTAGTTTGCCAGGAACCCGGGGCTaGGTAGGGATCTGCGGCCGGGCCTCAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LASSCSLPGTRG*VGICGRASGLA
Trigger: GGCCAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR TCA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ASGDALGARGAGRFFVLGWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTGGCCCGGTTTCCGGCTaGGGCTGCGGCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVGPVSG*GCGSEL
Trigger: GAGCTCGGAGCCGCAGCCGCAGCCGGAAACCGGGCC...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp GGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCTGCTGGTGGGACAGGCAGTTCGTaGAGTCTCCCGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GRAGCARGRALLCLGAAGGTGSS*SLPFTR
Trigger: CCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCC...ACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERLGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGAGCCTGCCAGGGGCTaGATGGCCGAGGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPEPARG*MAEEPP
Trigger: AGGTGGCTCCTCGGCCATGCAGCCCCTGGCAGGCTC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GACAGGCTCTCCACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: DRLSTLSAGDGVAEGGSEKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...CTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCCACGCAGCTTCTCCTCCAGCAGCACCCCACGGTGCTCCAGGGCATCCAGCCGGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ATQLLLQQHPTVLQGIQPVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...CGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LGTAGGSRSSAPAVWLALLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...GAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCTGCTGGTTGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRAGCARGRALLCLGAAGWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...ACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGTACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASGDALGARGAGRFFVLGYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CCAGGAACCCGGGGCTTGGTAGGGATCTGCGGCCGGGCCTCAGGGCTGGCCTTGTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PGTRGLVGICGRASGLALFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...CAAGGCCAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSPQGAG*WSTADT
Trigger: GGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAPQGAG*WSTADT
Trigger: GGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCGGCTTGGTAGGGATCTaGGGCCGGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQGGVGREADRVSRGTRGGLVGI*GRASGL
Trigger: CAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCC...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACCAGGTTCTCCTGCTaGAGACTGGAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTTRFSC*RLERGR
Trigger: CCGGCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGT...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp TCATCCTCACGGCCCTCATTCAGGCCGCCACGCAGCTTCTCCTCCAGCAGCACCTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSRPSFRPPRSFSSSSTLVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...GGTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCTGCTGGTACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRAGCARGRALLCLGAAGTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...ACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGGCGTGGAGAGCCCTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: DGVAEGGSECERREAWRALSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...GGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCATCCTCACGGCCCTCATTCAGGCCGCCACGCAGCTTCTCCTCCAGCAGCACCGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SSSRPSFRPPRSFSSSSTVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...GGTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTAGAAGGGCCCAGGCCTaGTCCCCGACCGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSRRAQA*SPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGALQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLGTAGGSRSSAPAVWLAREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...CGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGTCTGGCCGGTGCCCTGCTCTGACAGGCTGCCTGAGGAGAGCTCCTCGCCCTACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GVWPVPCSDRLPEESSSPYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...GGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR TCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR TCA 90 bp TCATCCTCACGGCCCTCATTCAGGCCGCCACGCAGCTTCTCCTCCAGCAGCACCACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSSRPSFRPPRSFSSSSTTGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...GGTGCTGCTGGAGGAGAAGCTGCGTGGCGGCCTGAATGAGGGCCGTGAGGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAAGGCGGAGCTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPRRSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAAGCTCCGCCT...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGTGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GGGCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GLLSPTNKRGVGVAPLQGGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...GCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGGGAGAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSAGDGVAEGGSECERRESCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...CTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CCAGGAACCCGGGGCTTGGTAGGGATCTGCGGCCGGGCCTCAGGGCTGGCCTTGTCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PGTRGLVGICGRASGLALSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...CAAGGCCAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAGGCTTGGTAGGGATCTaGGGCCGGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSGLVGI*GRASGL
Trigger: CAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCC...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCATCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSLVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIREGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGCGACGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSLAGALRRQALHAERWRRLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...TCGCCAGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGCACAGCCCAGGAGCTaGTCCAGGAGGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSAQPRS*SRRGQS
Trigger: GGACTGCCCCCTCCTGGAGCAGCTCCTGGGCTGTGC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCACAGCCCAGGAGCTaGTCCAGGAGGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGAQPRS*SRRGQS
Trigger: GGACTGCCCCCTCCTGGAGCAGCTCCTGGGCTGTGC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGGTGAGGGGCGGAAGTaGTCAGCAGGCGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSGEGRK*SAGAPP
Trigger: GGGAGGGGCGCCTGCTGAGCACTTCCGCCCCTCACC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: APVSNQQERRWGGATAGLVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...AAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCAGGGAGCAGGGTGCTaGAGCACCGCCGACACCGGA +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAQGAGC*STADTG
Trigger: TCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp AGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSAPAVWLALSDDRLSTLVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...CAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCCAGGCTGGCCGTTGGGCTCGGCTGGGCCACCTCCTCGGTGCCTCCATTCTCGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQAGRWARLGHLLGASILAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...GAGAATGGAGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTCACCTGCCCCAGCATaGCCGTCGCAGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGASPAPA*PSQPWS
Trigger: GGACCAGGGCTGCGACGGCCATGCTGGGGCAGGTGA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSTGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSTGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCCAGGTTGGGCAGGGCTaGATCACCGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCQVGQG*ITAAWG
Trigger: GCCCCAGGCAGCGGTGATTCAGCCCTGCCCAACCTG...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTCCCAGTGGCAGGCGGTaGGGGCAGAGATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVPSGRR*GQRSLL
Trigger: CAAGAGGGATCTCTGCCCTCACCGCCTGCCACTGGG...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGTTTCCGGCTGCGGCTaGGGCTCCGAGCTCGGGCGC +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAVSGCG*GSELGR
Trigger: GCGCCCGAGCTCGGAGCCGCAGCCGCAGCCGGAAAC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AGCTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTTGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWGRLLEHPWHLLRVAAGWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...ACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTACCAGGTTCTCCTGCTaGAGACTGGAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGATRFSC*RLERGR
Trigger: CCGGCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGT...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGTCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGGTGAGGGGCGGAAGTaGTCAGCAGGCGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEGEGRK*SAGAPP
Trigger: GGGAGGGGCGCCTGCTGAGCACTTCCGCCCCTCACC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTTGGCCCAGCGCCACTTaGTGGCCTGCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVWPSAT*WPAWKS
Trigger: GCTCTTCCAGGCAGGCCAGCAAGTGGCGCTGGGCCA...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCCAGGGAGCAGGGTGCTaGAGCACCGCCGACACCGGA +
Preference number: 4 (lower is better)
Translates to: ELEPVHQHVILTALIQAAQGAGC*STADTG
Trigger: TCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTG...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPAGAAS*NILGIF
Trigger: GAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGCCGGGCCTCAGGGCTaGCCTTGGGTCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRAGPQG*PWVHRP
Trigger: AGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCCAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LGTAGGSRSSAPAVWLALQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...GAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: APAVWLALSDDRLSTLSASAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp AGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSAPAVWLALSDDRLSTLGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...CAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGCAGGCGCCCCTCCCTaGACCCTGGGACCCTATTTG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSAGAPP*TLGPYL
Trigger: CAAATAGGGTCCCAGGGTCCAGGGAGGGGCGCCTGC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCGCAGCCCTGGTCCTaGCAAGGGAGGCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSSQPWS*QGRLPV
Trigger: CACAGGGAGCCTCCCTTGCCAGGACCAGGGCTGCGA...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
3UTR CAA 72 bp GGAAAGCCGTGTCCAGGGGCAGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTCTTTGTGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GKPCPGAGGLTG*DPLVAFFVAGD
Trigger: GTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCCCCTGGACACGGCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ELEPVHQHVILTALIQAATGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGGTTGGGCAGGGCTaGATCACCGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQVGQG*ITAAWG
Trigger: GCCCCAGGCAGCGGTGATTCAGCCCTGCCCAACCTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGGCAGGAGGATGGCGTaGACCCAGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSGRRMA*TQEAEL
Trigger: AAGCTCCGCCTCCTGGGTTCACGCCATCCTCCTGCC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACGTCCCGGAAGGAGCTaGTCAGGTCGCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSRPGRS*SGRGSP
Trigger: TGGAGATCCGCGACCTGAGCAGCTCCTTCCGGGACG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGCTGGCTGGGGACCTTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: NKRGVGVAPLQGLAGWGPFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...AGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACAGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSYSTSAWRCSRFCCLKTGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...TGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACC +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEPQGAG*WSTADT
Trigger: GGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGG...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPASCCW*CCFGCE
Trigger: CTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGGCTTGGTAGGGATCTaGGGCCGGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRGLVGI*GRASGL
Trigger: CAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCTGCTGCTGCCAGCCTaGTCCACCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGALLLPA*STRFSC
Trigger: GCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSSPGCC*QPAPPG
Trigger: ACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GACAGGCTCTCCACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGCTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: DRLSTLSAGDGVAEGGSELLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...CTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSAPAVWLALSDDRLSTLHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...CAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACTTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHLGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACGCCGCACCAGTAGGTaGTTCTCGTGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPRRTSR*FSWMSL
Trigger: CAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGGVGREADRVSRGTRGSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTGAAGGCAAACAAGGCTaGCGCTGTGGCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVEGKQG*RCGPRL
Trigger: CAGCCTCGGGCCACAGCGGCAGCCTTGTTTGCCTTC...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACCAGGCGTCGTAGCATaGGCCTGTAGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSPGVVA*ACSPSC
Trigger: GCAGCTGGGACTACAGGCGCATGCTACGACGCCTGG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGGGGACAGGCAGTTCGTaGAGTCTCCCGGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRGTGSS*SLPEAV
Trigger: CACTGCTTCCGGGAGACTGCACGAACTGCCTGTCCC...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTGGAGACCATGTCATTaGGGTCCAGGAGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGTAGGSRSSAPAVWLALWRPCH*GPGERG
Trigger: TCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCA...GAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRKALSG*RDTSLA
Trigger: GGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGARKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCGACACCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSRHRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSSPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGCTGCTTGGGGGAAGTaGGGCTGGCTTCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPAAWGK*GWLLLW
Trigger: CCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGGCTGCTTGGGGGAAGTaGGGCTGGCTTCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLGTAGGSRSSAPAVWLAAAWGK*GWLLLW
Trigger: CCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGC...CGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GIQPALNGIHLSMDVLLRAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...CCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GACAGGCTCTCCACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: DRLSTLSAGDGVAEGGSEVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...CTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGGGGCAGTCCCCAACTaGCTTCTCGTGCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPGAVPN*LLVLLA
Trigger: AGCTAACAGCACGAGAAGCCAGTTGGGGACTGCCCC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACCCAGCGCCACTTGCTaGCCTGCCTGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSPSATC*PAWKSR
Trigger: TCTGCTCTTCCAGGCAGGCCAGCAAGTGGCGCTGGG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATGGCCGTCGCAGCCCTaGTCCTGGCAAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRWPSQP*SWQGRL
Trigger: GAGCCTCCCTTGCCAGGACCAGGGCTGCGACGGCCA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTAGGCCCTGGAGTTGGTaGCGCCAGCTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVRPWSW*RQLQVN
Trigger: GTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCT...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGTCTCCCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: APVSNQQERRWGGATAGLVSRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGGAGAC...AAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR TCA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQGGVGREADRVSRGTRGRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCGTCCCGGAAGGAGCTaGTCAGGTCGCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSRPGRS*SGRGSP
Trigger: TGGAGATCCGCGACCTGAGCAGCTCCTTCCGGGACG...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGTKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSCTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPPGTVF*THKGAL
Trigger: GAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GIQPALNGIHLSMDVLLRIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...CCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCCAGCTCCTGTAGTTTaGCAGGAACCCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSPAPVV*QEPGAW
Trigger: CCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCTCCACCAGGTTCTCCTaGTGCAGACTGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSSTRFS*CRLERG
Trigger: GCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGTGGA...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGGGACAGGCAGTTCGTaGAGTCTCCCGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGGTGSS*SLPFTR
Trigger: CCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIALVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCTTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIALGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: APAVWLALSDDRLSTLSAQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGASSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GCCACGCAGCTTCTCCTCCAGCAGCACCCCACGGTGCTCCAGGGCATCCAGCCGTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: ATQLLLQQHPTVLQGIQPCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...CGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGGGCTGAATCACCGCTaGCTGGGGCTCGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAGLNHR*LGLGEE
Trigger: TTCTTCTCCGAGCCCCAGGCAGCGGTGATTCAGCCC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGGGCTGAATCACCGCTaGCTGGGGCTCGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGGLNHR*LGLGEE
Trigger: TTCTTCTCCGAGCCCCAGGCAGCGGTGATTCAGCCC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAKALSG*RDTSLA
Trigger: GGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: ELEPVHQHVILTALIQAARKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCCGACACCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCRHRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCG...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACAGAAGGGCCCAGGCCTaGTCCCCGACCGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNRRAQA*SPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GAGCCTCTTCCTCCTTGTCCTCCTCCTCCTCCTCAAAGGGGTTATAGGGTTTGGGCCGGGCCTCAGGGCTaGCCTTGGGTCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: EPLPPCPPPPPQRGYRVWAGPQG*PWVHRP
Trigger: AGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGC...CCAAACCCTATAACCCCTTTGAGGAGGAGGAGGAGGACAAGGAGGAAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNSPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ELEPVHQHVILTALIQAAVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTCTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTLQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGCTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTCACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: SWGRLLEHPWHLLRVAAGHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...ACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGATCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGSAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GCACTGGAGCTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALELGPPPGTSLASSASCWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...GCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCTCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTTCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: APAVWLALSDDRLSTLSASSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGCCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCAGGAACCCGGGGCTTGGTAGGGATCTGCGGCCGGGCCTCAGGGCTGGCCTTGGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: PGTRGLVGICGRASGLALGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...CAAGGCCAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGCAGGCGCCCCTCCCTaGACCCTGGGACCCTATTTG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHAGAPP*TLGPYL
Trigger: CAAATAGGGTCCCAGGGTCCAGGGAGGGGCGCCTGC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCAGCGAGCCTCTTCCCTaGACCGGGGTGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSSEPLP*TGVAEE
Trigger: TTCCTCTGCCACCCCGGTCCAGGGAAGAGGCTCGCT...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGCCCTGGAAAGGCCCTaGAGTTGGTGGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHALERP*SWWRQL
Trigger: GAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCCGCTCCTGGAACTGTaGGGGAGAGAGGGATGGATT +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAPLLEL*GREGWI
Trigger: AATCCATCCCTCTCTCCCTCACAGTTCCAGGAGCGG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGCCAGCTTTGTCTCCTaGCACCGAAACAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSASFVS*HRNSPS
Trigger: TGACGGGCTGTTTCGGTGTCAGGAGACAAAGCTGGC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGATTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCTGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCCTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACC +
Preference number: 4 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSPQGAG*WSTADT
Trigger: GGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGG...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSASCCW*CCFGCE
Trigger: CTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGC...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGCTGGCTGGGGACCTATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NKRGVGVAPLQGLAGWGPILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...AGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATCCACCAGGTTCTCCTaGTGCAGACTGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRSTRFS*CRLERG
Trigger: GCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGTGGA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACTGCTGCTGCCAGCCTaGTCCACCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSELLLPA*STRFSC
Trigger: GCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAG...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACTCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHSPGCC*QPAPPG
Trigger: ACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGA...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCACTCTAGGCTCCACTAGTTCCCCAGAGGAGGCCAGGGAGGAGTTGGTAGAGTCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: STLGSTSSPEEAREELVESPGCC*QPAPPG
Trigger: ACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGA...CTCTACCAACTCCTCCCTGGCCTCCTCTGGGGAACTAGTGGAGCCTAGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCATGGACAGCAGGCAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VGREADRVSRGTRGMDSRQKLCT*SLAGAL
Trigger: GAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTG...CCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRRLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTTGGAGACCATGTCATTaGGGTCCAGGAGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVWRPCH*GPGERG
Trigger: TCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCA...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAAGTCAGGGACGCTCATaGAGACCATGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPSQGRS*RPCHWG
Trigger: ACCCCAATGACATGGTCTCCATGAGCGTCCCTGACT...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCAGTCAGGGACGCTCATaGAGACCATGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERSQGRS*RPCHWG
Trigger: ACCCCAATGACATGGTCTCCATGAGCGTCCCTGACT...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAVQGPF*VARHQL
Trigger: AAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCTGAGGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SEELLGTAGGSRSSAPAVVQGPF*VARHQL
Trigger: AAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...GACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TVLQGIQPALNGIHLSMDLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...ATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPRKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACACAGGGAGCAGGGTGCTaGAGCACCGCCGACACCGGA +
Preference number: 4 (lower is better)
Translates to: NCEGERDGFARQAHSRLTQGAGC*STADTG
Trigger: TCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTG...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQEHWS*GRLLEH
Trigger: ATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGCCGGGCCTCAGGGCTaGCCTTGGGTCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDAGPQG*PWVHRP
Trigger: AGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKLQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCCTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSLQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRRGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGACAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HGAPGHPAGAQWYPSLHGQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCCCCTCCCTGGACCCTaGGACCCTATTTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHPLPGP*DPICPL
Trigger: CAAGGGGCAAATAGGGTCCCAGGGTCCAGGGAGGGG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCAGGAAGAAGCCAGTGTaGCCCAGCGCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSRKKPV*PSATCW
Trigger: CCAGCAAGTGGCGCTGGGCCACACTGGCTTCTTCCT...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCCATCAGGCCTTCGGTaGGAGGGAGTCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSPSGLR*EGVRER
Trigger: TCTTTCCCTGACTCCCTCCCACCGAAGGCCTGATGG...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTGGCAGAGATCCCTCTTaGAGGATGGCCCCAACATGG +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVGRDPS*RMAPTW
Trigger: CCATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCC...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR TCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGCAGTCAGAGGTCCCTaGGGAGGAAGAGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRAVRGP*GGRGHH
Trigger: GTGATGGCCTCTTCCTCCTCAGGGACCTCTGACTGC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGCAGTCAGAGGTCCCTaGGGAGGAAGAGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHAVRGP*GGRGHH
Trigger: GTGATGGCCTCTTCCTCCTCAGGGACCTCTGACTGC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACC +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLPQGAG*WSTADT
Trigger: GGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGALHTQR*PPQAHS
Trigger: AGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSPGTVF*THKGAL
Trigger: GAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGATCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACCAGCTCCTGTAGTTTaGCAGGAACCCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRPAPVV*QEPGAW
Trigger: CCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACACCAGGTTCTCCTGCTaGAGACTGGAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNTRFSC*RLERGR
Trigger: CCGGCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGT...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATTCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNSPGCC*QPAPPG
Trigger: ACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGA...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGGGACAGGCAGTTCGTaGAGTCTCCCGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEGTGSS*SLPFTR
Trigger: CCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEQKLCT*SLAGAL
Trigger: GAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTG...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LQGIQPALNGIHLSMDVLQKLCT*SLAGAL
Trigger: GAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTG...GAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGCGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNERLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: CTCSLAGALRRQALHAERMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACCCTGGGACCCTATTTaGCCCTTGGGTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRPWDPI*PLGPSQ
Trigger: CTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTAGAGAGGGATGGATTTaGCCGTCAGGCCCATTCACG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSREGWI*PSGPFT
Trigger: CGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCT...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGCTGGGCACATTTCCTaGAGAAAAGGTGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSAGHIS*RKGGGP
Trigger: GGGACCGCCACCTTTTCTGCAGGAAATGTGCCCAGC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGGAGCCACCTCTCCCTaGAGAGGAAAGGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRGATSP*RGKGSC
Trigger: GCAGGATCCCTTTCCTCTGCAGGGAGAGGTGGCTCC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGGCGAGACACCAGCTTaGCCAGGACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHGETPA*PGLQKW
Trigger: CCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGGCGAGACACCAGCTTaGCCAGGACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEGETPA*PGLQKW
Trigger: CCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCVQGPF*VARHQL
Trigger: AAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNRKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEAGAAS*NILGIF
Trigger: GAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAQEHWS*GRLLEH
Trigger: ATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTG...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNQEHWS*GRLLEH
Trigger: ATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGCCGGGCCTCAGGGCTaGCCTTGGGTCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSAGPQG*PWVHRP
Trigger: AGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFSPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGCACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCATGGACAGCAGGCTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VGREADRVSRGTRGMDSRLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...CCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGATCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGSSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCACCCTATTTGCCCCTTaGGTCCGTCACAGCATCCGC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSTLFAP*VRHSIR
Trigger: GCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGT...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTGAGGGAAGCCGCTCCTaGAACTGTGAGGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPEGSRS*NCEGER
Trigger: CCTCTCTCCCTCACAGTTCCAGGAGCGGCTTCCCTC...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATTCCTGCAGAAAAGGTaGCGGTCCCCATCACTCCTC +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSFLQKR*RSPSLL
Trigger: GAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAA...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCTGTGGCAGAGGCAGGTaGGAAGGCAAACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSCGRGR*EGKQGC
Trigger: GCAGCCTTGTTTGCCTTCCCACCTGCCTCTGCCACA...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAAGGATGGCCCCAACATaGCCTCTGGGCGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSERMAPT*PLGDQR
Trigger: TCTCTGGTCGCCCAGAGGCCATGTTGGGGCCATCCT...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGAAAGGCCCTGGAGTTaGTGGCGCCAGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAERPWS*WRQLQV
Trigger: GACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGAAGGCCAGGGCTGGCTTaGGGCATTTGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: HGAPGHPAGAQWYPSLHGRPGLA*GICSTL
Trigger: TAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCT...TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACGCCATCCCAGAGGGGTaGGTAGCCATCAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNAIPEG*VAIRPS
Trigger: CGAAGGCCTGATGGCTACTCACCCCTCTGGGATGGC...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACACCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: NCEGERDGFARQAHSRLTPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRCTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCCAGCTCCTGTAGTTTaGCAGGAACCCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGPAPVV*QEPGAW
Trigger: CCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGG...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLLVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATAGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LILDISLALLQVLLLEDIGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGACGCCGCACCAGTAGGTaGTTCTCGTGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRRRTSR*FSWMSL
Trigger: CAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCG...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGTTCACCCCTGCCCCTaGCAGCTTTGTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRVHPCP*QLCLLT
Trigger: TGTCAGGAGACAAAGCTGGCAGGGGCAGGGGTGAAC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATGGAGACCATGTCATTaGGGTCCAGGAGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEWRPCH*GPGERG
Trigger: TCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGGCGAGACACCAGCTTaGCCAGGACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNGETPA*PGLQKW
Trigger: CCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: APVSNQQERRWGGATAGLIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...AAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSLSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNSPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMQEHWS*GRLLEH
Trigger: ATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTG...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGCTGCTTGGGGGAAGTaGGGCTGGCTTCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHAAWGK*GWLLLW
Trigger: CCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRSAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCGCCACTGCAGGGCTTaGCTGGCTGGGGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFRHCRA*LAGDLS
Trigger: GCTCAGGTCCCCAGCCAGCCAAGCCCTGCAGTGGCG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAGCTTGAACCAGTCCACCAGCATGTCATCCTCACGGCCCTCATTCAGGCCGCCCTGGCTTGGATCCCTTaGTGGCCTTCTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELEPVHQHVILTALIQAALAWIP*WPSLWL
Trigger: CAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAG...GGCGGCCTGAATGAGGGCCGTGAGGATGACATGCTGGTGGACTGGTTCAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCCCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: QNCSLGTALGAANRALTCPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACGTCCAGTCCTTTTCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGRPVLF*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGAAAAGGACTGGACG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCACGTCCAGTCCTTTTCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSRPVLF*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGAAAAGGACTGGACG...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCATGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAACCCTATTTGCCCCTTaGGTCCGTCACAGCATCCGC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSETLFAP*VRHSIR
Trigger: GCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGT...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCCCCAACATGGCCTCTaGGCGACCAGAGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHPQHGL*ATRDVQ
Trigger: CTGAACATCTCTGGTCGCCCAGAGGCCATGTTGGGG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGGCCAGGGCTGGCTTaGGGCATTTGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHRPGLA*GICSTL
Trigger: TAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCT...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIARCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGGCCCATTCACGTCTaGCAGTACAGGCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHRPIHV*QYRPLS
Trigger: ACTGAGTGGCCTGTACTGTCAGACGTGAATGGGCCT...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp GCCCTGGAAAGGCCCTGGAGTTGGTGGCGCCAGCTCCAGGTCAACAGGCATGTTCAGGGCACTGGCAGTTaGGGTTGTCTGTTTATTGGT +
Preference number: 4 (lower is better)
Translates to: ALERPWSWWRQLQVNRHVQGTGS*GCLFIG
Trigger: ACCAATAAACAGACAACCTCAACTGCCAGTGCCCTG...AACATGCCTGTTGACCTGGAGCTGGCGCCACCAACTCCAGGGCCTTTCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRASCCW*CCFGCE
Trigger: CTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGC...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGALLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGLLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp GCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGAGGACTTTACCGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAGDGFRLKGFSLQEDFTGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...GGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSEGGSE*ERREAW
Trigger: CCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTC...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTCAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTQKLCT*SLAGAL
Trigger: GAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTG...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCAATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGGGCGAGACACCAGCTTaGCCAGGACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMGETPA*PGLQKW
Trigger: CCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSELSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAAGAAGGGCCCAGGCCTaGTCCCCGACCGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTRRAQA*SPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGCCGGGCCTCAGGGCTaGCCTTGGGTCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTAGPQG*PWVHRP
Trigger: AGGCCGATGGACCCAAGGCCAGCCCTGAGGCCCGGC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTCACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSERGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTSAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCTGGCTTGGATCCCTTaGTGGCCTTCTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHLAWIP*WPSLWL
Trigger: CAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTATTGAGGAGGCACCGGAGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGCTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLRRHRSSYSTSAWRCSRLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...CCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRSSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTAGTAGGTGCTTCTCGTaGATGAGCTTGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGASRCFS*MSLNQS
Trigger: GGACTGGTTCAAGCTCATCCACGAGAAGCACCTACT...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGTACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCCCCTCCCTGGACCCTaGGACCCTATTTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDPLPGP*DPICPL
Trigger: CAAGGGGCAAATAGGGTCCCAGGGTCCAGGGAGGGG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTGAGGCTGCAGGGCACTaGCAGTTGAGGTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPEAAGH*QLRLSV
Trigger: AACAGACAACCTCAACTGCCAGTGCCCTGCAGCCTC...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTTTACCTGTCTGGCCCTaGAAAGGCCCTGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPLPVWP*KGPGVG
Trigger: ACCAACTCCAGGGCCTTTCCAGGGCCAGACAGGTAA...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNVQGPF*VARHQQ
Trigger: TTGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCATCTTCCTCCTGACTaGTCTGAGGGGAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDHLPPD*SEGSRA
Trigger: CGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGATG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACCTGAGTGAGGGAAACTaGGATCCAAGGGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNLSEGN*DPRAPA
Trigger: TGCAGGCGCCCTTGGATCTCAGTTTCCCTCACTCAG...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACAGCTTGGCCAGGACTaGAGAAGTGGTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGQLGQD*RSGCNT
Trigger: AGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCCTGCTCTGACAGGCTaGCTGAGGAGAGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLPALTG*LRRAPR
Trigger: GCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATGGGGGTCTGGCCGGTaGCCTGCTCTGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTWGSGR*PALTGC
Trigger: GCAGCCTGTCAGAGCAGGGCACCGGCCAGACCCCCA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKTKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATTCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTCCACCAGGTTCTCCTaGTGCAGACTGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSSTRFS*CRLERG
Trigger: GCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGTGGA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCTGCTGCTGCCAGCCTaGTCCACCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFLLLPA*STRFSC
Trigger: GCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTTCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCTTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: LQGIQPALNGIHLSMDVLFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...GAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSLVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTLGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACAAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: NCEGERDGFARQAHSRLTRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGCTTTGACCAAGAGCTaGTGGGCACATTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEALTKS*WAHFLQ
Trigger: CTGCAGGAAATGTGCCCAGCAGCTCTTGGTCAAAGC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTTGTTTAGAAGGAGCCTaGCAGGGGCTGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTCLEGA*QGLHGR
Trigger: TCGGCCATGCAGCCCCTGGCAGGCTCCTTCTAAACA...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGTCAGGGACGCTCATaGAGACCATGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHSQGRS*RPCHWG
Trigger: ACCCCAATGACATGGTCTCCATGAGCGTCCCTGACT...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDKALSG*RDTSLA
Trigger: GGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKKALSG*RDTSLA
Trigger: GGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGCTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQLSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGCTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMLSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAAGAAGGGCCCAGGCCTaGTCCCCGACCGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSRRAQA*SPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSLLEHP*HLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAG...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCAGGAGCACTGGAGCTaGGGCCGCCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLQEHWS*GRLLEH
Trigger: ATGTTCCAGGAGGCGGCCCCAGCTCCAGTGCTCCTG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PLPVLIQAVDDSVALLNERGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTGCAGGGACTTGGGTGTaGACTCCGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSAGTWV*TPGGPG
Trigger: CCCTGGGCCACCCGGAGTCCACACCCAAGTCCCTGC...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCGGGGTACCAGGGGCATaGACAGCAGGCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFGVPGA*TAGSEE
Trigger: CTCCTCAGAGCCTGCTGTCCATGCCCCTGGTACCCC...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCAACAAGAGAGGCGTTaGGGTGGCGCCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLQQERR*GGATAG
Trigger: CCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACACTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: NCEGERDGFARQAHSRLTLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGTGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCCTGGCTTGGATCCCTTaGTGGCCTTCTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIALAWIP*WPSLWL
Trigger: CAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAG...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: PGPWDPICPLGPSQHPQSWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...TGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAAGGGAGGCTCCCTGTaGAGTAAGGGGAGACGAGGG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDKGGSL*SKGRRG
Trigger: CCCTCGTCTCCCCTTACTCCACAGGGAGCCTCCCTT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGGTTCAGCCTCCCTCTaGAACTCAGCCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTGSASL*NSASSP
Trigger: TGGGGATGAGGCTGAGTTCCAGAGGGAGGCTGAACC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424008.2
CDS-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACAGGCCAGGGCTGGCTTaGGGCATTTGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNRPGLA*GICSTL
Trigger: TAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCT...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTGCACCCTTCCTACCTaGCAACCAGGGACCAGAACT +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNCTLPT*QPGTRT
Trigger: AGTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACCTCACCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGPHLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGGTGAGG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424008.2
CDS-3UTR GCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGGCAGGCTGCGCACGTaGTGCTGGGGGTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFGRLRT*CWGSGR
Trigger: CCGGCCAGACCCCCAGCAGCACGTGCGCAGCCTGCC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFTKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSTKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: SMVSISPWMSSSGMYWSACTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...GGCTGACCAGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACACCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSYSTSAWRCSRFCCLKTPGTVF*THKGAL
Trigger: GAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGG...TGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCGGGACAGGCAGTTCGTaGAGTCTCCCGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFGTGSS*SLPFTR
Trigger: CCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCC...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: GIQPALNGIHLSMDVLLRMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...CCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTCCTCTTCCTCCCTCTaGCGGTCCTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSSSSSL*RSSSRQ
Trigger: CTGCCTGGATGAGGACCGGCAGAGGGAGGAAGAGGA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCACCGAGATGAGCACCTaGTTCAAGTGCACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIATEMST*FKCTLP
Trigger: AGGAAGGGTGCACTTGAAGCAGGTGCTCATCTCGGT...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACTGTCACTCGGGTTCATaGGTGTTACCTGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNCHSGS*VLPVWP
Trigger: GGGCCAGACAGGTAACACGCATGAACCCGAGTGACA...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGTGGAGACCATGTCATTaGGGTCCAGGAGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKWRPCH*GPGERG
Trigger: TCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCA...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGGCGAGACACCAGCTTaGCCAGGACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSGETPA*PGLQKW
Trigger: CCACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSKALSG*RDTSLA
Trigger: GGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGAGGACTTTACCAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: AAGDGFRLKGFSLQEDFTKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...GGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHLLEHP*HLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSAGAAS*NILGIF
Trigger: GAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAAGGGGTGCAGGGACTTaGGTGTGGACTCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTRGAGT*VWTPGG
Trigger: GCCACCCGGAGTCCACACCCAAGTCCCTGCACCCCT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGGCGTGGAGAGCCAGTaGGGACGCGCTGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLGVESQ*GRAGCA
Trigger: CGCGCACCCAGCGCGTCCCCACTGGCTCTCCACGCC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTGGTGGCCTTCTTTGTaGCTGGGGACGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFWWPSL*LGTLQV
Trigger: CACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCA...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTCTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCTGGACCTTGCGTTTGATGTCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: PWMSSSGMYWSAWTLRLMSSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...CATCAAACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGAGGACATCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCGTCCAGTCCTTTTCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGRPVLF*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGAAAAGGACTGGACG...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGGGGCAGTCCCCAACTaGCTTCTCGTGCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDGAVPN*LLVLLA
Trigger: AGCTAACAGCACGAGAAGCCAGTTGGGGACTGCCCC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGCTTGGCCAGGACTaGAGAAGTGGTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQLGQD*RSGCNT
Trigger: AGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSFHWSG*YRRRGT
Trigger: TGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACAGGCTGCGCACGTGCTaGTGGGGGTCTGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNRLRTC*WGSGRC
Trigger: GCACCGGCCAGACCCCCAGCAGCACGTGCGCAGCCT...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDLHTQR*PPQAHS
Trigger: AGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNSCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTSCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATTCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACAATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NCEGERDGFARQAHSRLTILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAATCGGCCTCAGCCCCTaGAGGAGCACTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSIGLSP*RSTGAG
Trigger: CCCAGCTCCAGTGCTCCTGCAGGGGCTGAGGCCGAT...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCACCAGGCTGCTGCTaGCAGCCTGCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSPGCC*QPAPPG
Trigger: ACCTGGTGGAGCAGGCTGGCAGCAGCAGCCTGGTGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp AGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: SSYSTSAWRCSRFCCLKTFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...TGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCCTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: CRSSSRQLMIALRCSMRVLLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...GACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGGGTGGCGCCACTaGAGGGCTTGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVLGWRH*RAWLAG
Trigger: CCCAGCCAGCCAAGCCCTGCAGTGGCGCCACCCCAA...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCAGCAGCACCCCACGGTaGTCCAGGGCATCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVSSTPR*SRASSR
Trigger: CCGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCT...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCGCCGCACCAGTAGGTaGTTCTCGTGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLRRTSR*FSWMSL
Trigger: CAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAGATCCAAGGGCGCCTaGACAGGACAGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDRSKGA*TGQEDR
Trigger: TCTGTCTTCCTGTCCTGTGCAGGCGCCCTTGGATCT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTCGACACCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSRHRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCG...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCAGGGAGCAGGGTGCTaGAGCACCGCCGACACCGGA +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVQGAGC*STADTG
Trigger: TCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSSPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCAGAAGGGCCCAGGCCTaGTCCCCGACCGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFRRAQA*SPTVSP
Trigger: CGGGGACACGGTCGGGGACCAGGCCTGGGCCCTTCT...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATATGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LILDISLALLQVLLLEDIWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGCCGTTGGGCTCGGCTaGGCCACCTCCTCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLAVGLG*ATSSVP
Trigger: AGGCACCGAGGAGGTGGCCCAGCCGAGCCCAACGGC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCTCCAGGCTGGCCGTTaGGCTCGGCTGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFLQAGR*ARLGHL
Trigger: GAGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDRGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGCGCTGGCGATGGTGTaGCCGAGGGCGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFALAMV*PRAAPS
Trigger: ACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGCTGAGCGCTGGCGATaGTGTGGCCGAGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNAERWR*CGRGRL
Trigger: GAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCCCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATACCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LILDISLALLQVLLLEDIPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFYSTSA*RCSRFC
Trigger: GCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTA...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: TVLQGIQPALNGIHLSMDGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...ATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVTGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTAGGCCAGGGCTGGCTTaGGGCATTTGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSRPGLA*GICSTL
Trigger: TAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCT...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGTTAAGGAACCGAGATaGGCACCTGCTTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTVKEPR*APASSA
Trigger: TGCACTTGAAGCAGGTGCTCATCTCGGTTCCTTAAC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCAGCTTGGCCAGGACTaGAGAAGTGGTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRQLGQD*RSGCNT
Trigger: AGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTG...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680375.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCGTCTGGCCGGTGCCCTaGTCTGACAGGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVVWPVP*SDRLPE
Trigger: CTCAGGCAGCCTGTCAGAGCAGGGCACCGGCCAGAC...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATGCACCAAGTGCACATaGTGCTGGCAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTCTKCT*CWQAAH
Trigger: GTGCGCAGCCTGCCAGCAGCATGTGCACTTGGTGCA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTCCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSPGTVF*THKGAL
Trigger: GAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGG...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGGCTTGGTAGGGATCTaGGGCCGGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNGLVGI*GRASGL
Trigger: CAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCACCAGGTTCTCCTGCTaGAGACTGGAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPTRFSC*RLERGR
Trigger: CCGGCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGT...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATCCCGTTCACCAGGCTaGTGCTGCCAGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSSRSPG*CCQPAP
Trigger: TGGAGCAGGCTGGCAGCAGCAGCCTGGTGAACGGGA...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATTTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSRLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GATGAGCACCTGCTTCAAGTGCACCCTTCCTACCTGACAACCAGGGACCAGAACATGATAGCGTTGCGCTaGTCAATGAGGGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: DEHLLQVHPSYLTTRDQNMIALR*SMRVTS
Trigger: GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCAT...GTTCTGGTCCCTGGTTGTCAGGTAGGAAGGGTGCACTTGAAGCAGGTGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGTGCTGCTGGGGGTCTaGCCGGTGCCCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFVLLGV*PVPCSD
Trigger: GTCAGAGCAGGGCACCGGCCAGACCCCCAGCAGCAC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCGACACCGGAAGCAGTaGCGATGGTACAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMRHRKQ*RWYSLP
Trigger: CGGCAGGCTGTACCATCGCCACTGCTTCCGGTGTCG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCAGGGAGCAGGGTGCTaGAGCACCGCCGACACCGGA +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFQGAGC*STADTG
Trigger: TCCGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTCTCCTGCTGCAGACTaGAGCGGGGCCGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLSPAAD*SGAGAW
Trigger: CCACGCCCCGGCCCCGCTCCAGTCTGCAGCAGGAGA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCGTCCTTCCTGGGGGCTaGTGTCCCCTCGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLVLPGG*CPLGRL
Trigger: AAGCCGTCCGAGGGGACACCAGCCCCCAGGAAGGAC...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCACCAGCGTGATCCATaGGGGGTCCTTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLHQRDP*GVLPGG
Trigger: GCCCCCAGGAAGGACCCCCCATGGATCACGCTGGTG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTGGTCAGCCGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: SMVSISPWMSSSGMYWSAGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...GGCTGACCAGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCTCCACGCTGAGCGCTaGCGATGGTGTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFLHAER*RWCGRG
Trigger: CCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGAG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSSAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTAGTAGGTGCTTCTCGTaGATGAGCTTGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTSRCFS*MSLNQS
Trigger: GGACTGGTTCAAGCTCATCCACGAGAAGCACCTACT...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CCA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTAGTAGGTGCTTCTCGTaGATGAGCTTGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTSRCFS*MSLNQS
Trigger: GGACTGGTTCAAGCTCATCCACGAGAAGCACCTACT...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGTTAGCTCTTGTCTCTaGGGGACTTGCTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTVSSCL*GTCSWH
Trigger: ATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAAC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACACAGGCTCTCCACGCTaGGCGCTGGCGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNTGSPR*ALAMVW
Trigger: CCACACCATCGCCAGCGCTCAGCGTGGAGAGCCTGT...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HISCRKGGGPHHSSSPIATSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR TCA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR TCA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATTGTCTGTTTATTGGTaGGGAAACTCCTCGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PWDPICPLGPSQHPQSSELSVYW*GNSSRV
Trigger: AACTCTCGAGGAGTTTCCTCACCAATAAACAGACAA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGGCTTGGTAGGGATCTaGGGCCGGGCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLGLVGI*GRASGL
Trigger: CAGCCCTGAGGCCCGGCCGCAGATCCCTACCAAGCC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACACCAGGTTCTCCTGCTaGAGACTGGAGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNTRFSC*RLERGR
Trigger: CCGGCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGT...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTTTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCTTGGTGGCCCCGGGCTaGTGCTTGGGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFLVAPG*CLGEVG
Trigger: CCCCACTTCCCCCAAGCAGCAGCCCGGGGCCACCAA...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGGTGGCCAGGCTGGGTaGAGCTGGAGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLGGQAG*SWSLFL
Trigger: GAGGAAGAGGCTCCAGCTGCACCCAGCCTGGCCACC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCGGCTCCAGAAGCTCTaGACCTGCAGTCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLRLQKL*TCSLAG
Trigger: GCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSTSAWR*SRFCCL
Trigger: CAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGT...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKLLEHP*HLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAG...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMAGAAS*NILGIF
Trigger: GAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLVSPSA*GQAVRA
Trigger: TGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACAC...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCCACCTGCAGTCTGGCTaGCGCTCTCAGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPHLQSG*RSQTTG
Trigger: GCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTG...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCGCTCTTGGGCACAGCTaGCGGCTCCAGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLALGHS*RLQKLC
Trigger: GCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGC...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAGAGAGGCGTTGGGGTaGCGCCACTGCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLREALG*RHCRAW
Trigger: CCAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCT...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCGTCCAGTCCTTTTCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLRPVLF*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGAAAAGGACTGGACG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGTTAGCTCTTGTCTCTaGGGGACTTGCTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDVSSCL*GTCSWH
Trigger: ATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAAC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR TCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCTGCTGCTTTGGCTGTaGGAAGGGCCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFLLLWL*EGPRPG
Trigger: ACCAGGCCTGGGCCCTTCTCACAGCCAAAGCAGCAG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR TCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAAGGCCAGGGCTGGCTTaGGGCATTTGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTRPGLA*GICSTL
Trigger: TAGAGTGGAACAAATGCCTCAAGCCAGCCCTGGCCT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR TCA 90 bp AGCTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACAACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSYSTSAWRCSRFCCLKTTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...TGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACACTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTLHTQR*PPQAHS
Trigger: AGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAG...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTCCACCAGGTTCTCCTaGTGCAGACTGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFSTRFS*CRLERG
Trigger: GCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGTGGA...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGTCCACCAGGTTCTCCTaGTGCAGACTGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLSTRFS*CRLERG
Trigger: GCCCCGCTCCAGTCTGCAGCAGGAGAACCTGGTGGA...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGCTGCTGCTGCCAGCCTaGTCCACCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLLLLPA*STRFSC
Trigger: GCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAG...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCTGCTGCTGCCAGCCTaGTCCACCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNLLLPA*STRFSC
Trigger: GCAGGAGAACCTGGTGGAGCAGGCTGGCAGCAGCAG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCCATTCTCCACCTGCCTaGTGTCCTGGCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPHSPPA*CPGLVA
Trigger: GGCCACCAAGCCAGGACAGCAGGCAGGTGGAGAATG...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCCTCCATTCTCCACCTaGCTGCTGTCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMPPFST*LLSWLG
Trigger: ACCAAGCCAGGACAGCAGGCAGGTGGAGAATGGAGG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCAGAAGCTCTGCACCTaGAGTCTGGCTGGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLQKLCT*SLAGAL
Trigger: GAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMVQGPF*VARHQL
Trigger: AAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNLVPLE*VLQTAG
Trigger: CCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCAAGTGCACATGCTGCTaGCAGGCTGCGCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLKCTCC*QAAHVL
Trigger: CAGCACGTGCGCAGCCTGCCAGCAGCATGTGCACTT...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLRKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLLLEHP*HLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCGCTGGGGCCGCCTCCTaGAACATCCTTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLAGAAS*NILGIF
Trigger: GAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGC...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGCTGCTTGGGGGAAGTaGGGCTGGCTTCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMAAWGK*GWLLLW
Trigger: CCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGTTTGGACTCCAGGCTaGCCGTTGGGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFVWTPG*PLGSAG
Trigger: CCCAGCCGAGCCCAACGGCCAGCCTGGAGTCCAAAC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGCTTGGATCCCTTGGTaGCCTTCTTTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMAWIPW*PSLWLG
Trigger: CCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAGC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSSSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGAGGACTTTACCAGTAGGTGCTTCTCGTaGATGAGCTTGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: AAGDGFRLKGFSLQEDFTSRCFS*MSLNQS
Trigger: GGACTGGTTCAAGCTCATCCACGAGAAGCACCTACT...GGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR TCA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLGDGTA*RQPGSA
Trigger: AGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGTCTTCTGCGAGTTGCTaGTGGTGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMSSASC*WCCCFG
Trigger: GCCAAAGCAGCAGCACCAGCAGCAACTCGCAGAAGA...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCCAGCTCCTGTAGTTTaGCAGGAACCCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNPAPVV*QEPGAW
Trigger: CCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCCAGCTCCTGTAGTTTaGCAGGAACCCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFPAPVV*QEPGAW
Trigger: CCAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAAGTCAGGGACGCTCATaGAGACCATGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSQGRS*RPCHWG
Trigger: ACCCCAATGACATGGTCTCCATGAGCGTCCCTGACT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCGGAAGCAGTGGCGATaGTACAGCCTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFRKQWR*YSLPSA
Trigger: GGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCG...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCTCCCCGGGCCCAGCCTaGCACAGTGTTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFSPGPA*HSVLHT
Trigger: TGTGTGCAGAACACTGTGCCAGGCTGGGCCCGGGGA...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSRGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACTGGCTTGGATCCCTTaGTGGCCTTCTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSLAWIP*WPSLWL
Trigger: CAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGGCAGGTGGCCTCACTaGCTTGGATCCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLGRWPH*LGSLGG
Trigger: GCCACCAAGGGATCCAAGCCAGTGAGGCCACCTGCC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACCAGCCGGCGCTCAATaGTATCCATCTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSPAGAQ*YPSLHG
Trigger: TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: ELPLLLALRFSLPLELFLGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCGTTGCGCTGCTCAATaGGGGTCACAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNRCAAQ*GSQAPA
Trigger: TGCAGGAGCTTGTGACCCTCATTGAGCAGCGCAACG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCACATCTTCATGGTCTTaGACTTCCCCTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFTSSWS*TSPSSC
Trigger: GCAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGT...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGACCAAGTGCACATGCTaGTGGCAGGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLTKCTC*WQAAHV
Trigger: CACGTGCGCAGCCTGCCAGCAGCATGTGCACTTGGT...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMSCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGCGAGTTGCTGCTGGTaGTGCTGCTTTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNASCCW*CCFGCE
Trigger: CTCACAGCCAAAGCAGCAGCACCAGCAGCAACTCGC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGGGACAGGCAGTTCGTaGAGTCTCCCGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFGTGSS*SLPFTR
Trigger: CCTGGTGAACGGGAGACTGCACGAACTGCCTGTCCC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGCGCCGCACCAGTAGGTaGTTCTCGTGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLRRTSR*FSWMSL
Trigger: CAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCG...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACAGGGTCACAAGCTCCTaGATCAGCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNRVTSS*ISTFSR
Trigger: CCGGGAGAAGGTGCTGATGCAGGAGCTTGTGACCCT...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCCGCTGCTCCAGGTTCTaGTGCTTGAAGCATTCAGGC +
Preference number: 4 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPRCSRF*CLKHSG
Trigger: GCCTGAATGCTTCAAGCAGCAGAACCTGGAGCAGCG...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS-3UTR CCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNVQGPF*VARHQL
Trigger: AAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCAC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTCTCCTGGAACATCCTTaGCATCTTCTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSLLEHP*HLLRVA
Trigger: AGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAG...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCTGGGGGAAGTGGGGCTaGCTTCTTCTTTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLWGKWG*LLLWFC
Trigger: GCAGAACCAAAGAAGAAGCCAGCCCCACTTCCCCCA...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGCTGCTTGGGGGAAGTaGGGCTGGCTTCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLAAWGK*GWLLLW
Trigger: CCAAAGAAGAAGCCAGCCCCACTTCCCCCAAGCAGC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCAGGCTGGGTGCAGCTaGAGCCTCTTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFQAGCS*SLFLLV
Trigger: GACAAGGAGGAAGAGGCTCCAGCTGCACCCAGCCTG...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTCTGCACCTGCAGTCTaGCTGGCGCTCTCAGACGAC +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLSAPAV*LALSDD
Trigger: GTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCTTTACCTGCAGCTGTaGGGACGAGCTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFLYLQL*GRASRG
Trigger: TCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCTTGCGTTTGATGAGTaGAAAGCCGTGTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVLAFDE*KAVSRG
Trigger: GCCCCTGGACACGGCTTTCCACTCATCAAACGCAAG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTCCTCAGGGATGTACTaGTCAGCCTGGACCTTGCGT +
Preference number: 4 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPSSGMY*SAWTLR
Trigger: ACGCAAGGTCCAGGCTGACCAGTACATCCCTGAGGA...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCAAGGCCCTTTCTGGGTaGCGAGACACCAGCAAACGG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFKALSG*RDTSKR
Trigger: CCGTTTGCTGGTGTCTCGCCACCCAGAAAGGGCCTT...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR TCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLWGRCR*WLPVKR
Trigger: CCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR TCA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCGGAACTCTTTCTTCTTaGTCATGGCTTCCAACATCT +
Preference number: 4 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFGTLSS*SWLPTS
Trigger: AGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCC...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSLLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCAGGAGGACTTTACCTaGAGCTGTGGGGACGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNQEDFT*SCGDEL
Trigger: AAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCGCCGCACCAGTAGGTaGTTCTCGTGGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFRRTSR*FSWMSL
Trigger: CAAGCTCATCCACGAGAAGCACCTACTGGTGCGGCG...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCTGGAGACCATGTCATTaGGGTCCAGGAGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFWRPCH*GPGERG
Trigger: TCCCCGCTCTCCTGGACCCCAATGACATGGTCTCCA...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCAGTCAGGGACGCTCATaGAGACCATGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLSQGRS*RPCHWG
Trigger: ACCCCAATGACATGGTCTCCATGAGCGTCCCTGACT...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGGGCTGGCTTCTTCTTTaGTTCTGCCTGCACCAGCGT +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLGWLLL*FCLHQR
Trigger: ACGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCC...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACAATGTACTGGTCAGCCTaGACCTTGCGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTMYWSA*TLRLMS
Trigger: ACTCATCAAACGCAAGGTCCAGGCTGACCAGTACAT...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCGTCCAGTCCTTTTCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLRPVLF*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGAAAAGGACTGGACG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTGGTTCAGCCTCCCTCTaGAACTCTTTCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSGSASL*NSFFLI
Trigger: GATCAAGAAGAAAGAGTTCCAGAGGGAGGCTGAACC...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSWGTCS*HHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTCCTCCGTCCAGTCCTaGCTTATTGAGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLSSVQS*LIEEAP
Trigger: CGGTGCCTCCTCAATAAGCCAGGACTGGACGGAGGA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680501.1
CDS-3UTR GCA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCAGCTTGGCCAGGACTaGAGAAGTGGTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMQLGQD*RSGCNT
Trigger: AGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGCTGCACACACAAAGGTaGCCTCCTCAGGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLLHTQR*PPQAHS
Trigger: AGAATGGGCCTGAGGAGGGCACCTTTGTGTGTGCAG...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGCCTGGCACAGTGTTCTaGACACACAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLPGTVF*THKGAL
Trigger: GAGGGCACCTTTGTGTGTGCAGAACACTGTGCCAGG...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTGCTCCAGGTTCTGCTaGTTGAAGCATTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLCSRFC*LKHSGR
Trigger: GCGGCCTGAATGCTTCAAGCAGCAGAACCTGGAGCA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGG +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLIFWFH*SGCYRR
Trigger: CCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGAT...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGCTGAGCCACATCTTCTaGTTCCACTGGAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLLSHIF*FHWSGC
Trigger: GCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAG...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCAGGGGTTATAGGGTTTaGACTCCAGGCTGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFRGYRV*TPGWPL
Trigger: CAACGGCCAGCCTGGAGTCCAAACCCTATAACCCCT...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGCTGGCTTGGATCCCTTaGTGGCCTTCTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLLAWIP*WPSLWL
Trigger: CAGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAG...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
3UTR CAA 72 bp CTCTTGTCTCTGGGGGACTTGCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLSLGDLLLASR*FPSSFNIFMVL
Trigger: CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCAGTTGCTGCTGGTGCTaGTGCTTTGGCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFSCCWC*CFGCEK
Trigger: CTTCTCACAGCCAAAGCAGCAGCACCAGCAGCAACT...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCATCCTTGGCATCTTCTaGGAGTTGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFILGIF*ELLLVL
Trigger: CAGCACCAGCAGCAACTCGCAGAAGATGCCAAGGAT...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR GCA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCTTCTTTGGTTCTGCCTaGACCAGCGTGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFFFGSA*TSVIHG
Trigger: CCCATGGATCACGCTGGTGCAGGCAGAACCAAAGAA...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCTTCTTCTTTGGTTCTaGCTGCACCAGCGTGATCCA +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNLLLWF*LHQRDP
Trigger: TGGATCACGCTGGTGCAGGCAGAACCAAAGAAGAAG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNCLWGT*SWHHVC
Trigger: ACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGTATCCATCTCTCCATaGATGTCCTCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFVSISP*MSSSGM
Trigger: CATCCCTGAGGAGGACATCCATGGAGAGATGGATAC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CCA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAGTAGGTGCTTCTCGTaGATGAGCTTGAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLSRCFS*MSLNQS
Trigger: GGACTGGTTCAAGCTCATCCACGAGAAGCACCTACT...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR GCA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCAGCTTGGCCAGGACTaGAGAAGTGGTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFQLGQD*RSGCNT
Trigger: AGTATTACAACCACTTCTGCAGTCCTGGCCAAGCTG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: ASGDALGARGAGRFFVLGTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: ASGDALGARGAGRFFVLGGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCCAGTGGGGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ASGDALGARGAGRFFVLGPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...CCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCCCCACTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS GCA 90 bp TCCACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTaGGAGAGGCGGGAGGCGTGGAGAGCTTGGGAATGCCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: STLSAGDGVAEGGSE*ERREAWRAWECQRK
Trigger: CTTCCTCTGGCATTCCCAAGCTCTCCACGCCTCCCGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402631.1
ENST00000680578.1
CDS CCA 90 bp ACCCACGGTAGCCCCCTCCCTGGTTTCGGGGGTAACACGCGGCCCTaGCCACTCACCGGAAGCAGTGGCGATGGTACAGCCTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: THGSPLPGFGGNTRP*PLTGSSGDGTACRQ
Trigger: CTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGTGAGTGGCCAGGGCCGCGTGTTACCCCCGAAACCAGGGAGGGGGCTACCGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 90 bp CGGATCCTAGGAGTCTTCCCAACATTGCCGGCCTGTGACTCCTCTTaGGCGCCCCACCTGCGTGCCCCACTGAGGAGGGCTGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RILGVFPTLPACDSS*APHLRAPLRRAAGP
Trigger: TGGCCCTGCAGCCCTCCTCAGTGGGGCACGCAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCCTAGGATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS GCA 90 bp ACGCGGCCCTGGCCACTCACCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACATGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TRPWPLTGSSGDGTA*RQPGSAAPSAHAAG
Trigger: GCCAGCAGCATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGTGAGTGGCCAGGGCCGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTCCAGGAACCCGGGGCTaGGTAGGGATCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAPGTRG*VGICGR
Trigger: CCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TGCCCTGCTCTGACAGGCTGCCTGAGGAGAGCTCCTCGCCCTGAGCCACATCTTCCAGGAACCCGGGGCTaGGTAGGGATCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: CPALTGCLRRAPRPEPHLPGTRG*VGICGR
Trigger: CCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG...AAGATGTGGCTCAGGGCGAGGAGCTCTCCTCAGGCAGCCTGTCAGAGCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CAA 90 bp GCAGGAGGACTTTACCTGCAGCTGTGGGGACGAGCTTCCAGGGGAAGGCACCGGGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: AGGLYLQLWGRASRGRHRGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...CCGGTGCCTTCCCCTGGAAGCTCGTCCCCACAGCTGCAGGTAAAGTCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS GCA 90 bp CTCAGACCCCCTGAGCACCTGCCTCTGCCAGCTCTGGCATGCTCTTaGCCCACTGTGAGAGGGGGTCCCATGGAACTCTCAGAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LRPPEHLPLPALACS*PTVRGGPMELSEAA
Trigger: GGCCGCCTCTGAGAGTTCCATGGGACCCCCTCTCACAGTGGGGCAAGAGCATGCCAGAGCTGGCAGAGGCAGGTGCTCAGGGGGTCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402631.1
CDS-3UTR CAA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCAGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCCCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GQGGVGREADRVSRGTRGPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS CCA 90 bp GAACCCGGCCTGCACACCCCCTCACCAGAACAAACCCACCCACCCTaGGTTCCTCTAAGACTCAGCTCCTCAGGCCGGGCACAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: EPGLHTPSPEQTHPP*VPLRLSSSGRAQWL
Trigger: GAGCCACTGTGCCCGGCCTGAGGAGCTGAGTCTTAGAGGAACCCAGGGTGGGTGGGTTTGTTCTGGTGAGGGGGTGTGCAGGCCGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp CTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGATGGAGACCATGTCATaGGGGTCCAGGAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: LLGTAGGSRSSAPAVWLAMETMS*GSRRAG
Trigger: CCCCGCTCTCCTGGACCCCAATGACATGGTCTCCAT...CGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CAA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GQGGVGREADRVSRGTRGGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS GCA 90 bp GAGCTCCTCGCCCTGAGCCACATCTTCTGGTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ELLALSHIFWFHWSG*YRRRGTGCKALSGW
Trigger: CCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAGGGCGAGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000680868.1
ENST00000681920.1
CDS GCA 90 bp AGGCAGTTCGTGCAGTCTCCCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACATGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: RQFVQSPGSSGDGTA*RQPGSAAPSAHAAG
Trigger: GCCAGCAGCATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGGAGACTGCACGAACTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCCAGGAACCCGGGGCTaGGTAGGGATCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNPGTRG*VGICGR
Trigger: CCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CAA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CCACATTCAGCCCCACAGGCCACAGGTGACTTGACTTGCCTCCAGTTCACCCCTCAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: PHSAPQATGDLTCLQFTPQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...AGGGGTGAACTGGAGGCAAGTCAAGTCACCTGTGGCCTGTGGGGCTGAATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GCCACGCAGCTTCTCCTCCAGCAGCACCCCACGGTGCTCCAGGGCATCCAGCCGTCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ATQLLLQQHPTVLQGIQPSFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...CGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS TCA 90 bp GTCTATCAATCGGATCCTAGGAGTCTTCCCAACATTGCCGGCCTGTaGCTCCTCTTGCGCGCCCCACCTGCGTGCCCCACTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VYQSDPRSLPNIAGL*LLLRAPPACPTEEG
Trigger: GCCCTCCTCAGTGGGGCACGCAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCCTAGGATCCGATTGATAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS GCA 90 bp TTCTGGTTCCACTGGAGTGGGTGCTACAGACGGCGGGGAACAGGGTaGAAGGCCCTTTCTGGGTGGCGAGACACCAGCTTGGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: FWFHWSGCYRRRGTG*KALSGWRDTSLART
Trigger: AGTCCTGGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000681920.1
CDS CCA 90 bp AGGAGAGCTCCTCGCCCTGAGCCACATCTTCTGGTTCCACTGGAGTaGGTGCTACAGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RRAPRPEPHLLVPLE*VLQTAGNRVQGPFW
Trigger: CCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAGGGCGAGGAGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000680868.1
ENST00000681920.1
CDS CCA 90 bp AGGGCCATCGAGCACACACCCGGGAGGCAGGGCTGCGTCCTAAGTTaGGGGGCGTGGGGAAAGCACAGGGTCTGTACATCCATTCATCCA +
Preference number: 5 (lower is better)
Translates to: RAIEHTPGRQGCVLS*GAWGKHRVCTSIHP
Trigger: TGGATGAATGGATGTACAGACCCTGTGCTTTCCCCACGCCCCCCAACTTAGGACGCAGCCCTGCCTCCCGGGTGTGTGCTCGATGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 90 bp GAGTGGGTGCTACAGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTGCCAAGAGATGAGAAAGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: EWVLQTAGNRVQGPF*VARHQLPRDEKGVL
Trigger: CAGGACCCCTTTCTCATCTCTTGGCAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTATGGAGACCATGTCATaGGGGTCCAGGAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAMETMS*GSRRAG
Trigger: CCCCGCTCTCCTGGACCCCAATGACATGGTCTCCAT...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTGGCGAGACACCAGCTaGGCCAGGACTGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAWRDTS*ARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TCTGAGGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCGAGACACCAGCTaGGCCAGGACTGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SEELLGTAGGSRSSAPAVWRDTS*ARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCA...GACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACCTCCTGGAACATCCTaGGCATCTTCTGCGAGTTGC +
Preference number: 5 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPPPGTS*ASSASC
Trigger: GCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TCCCTGGACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: SLDPGTLFAPWVRHSIRSGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...ACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TCTGAGGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: SEELLGTAGGSRSSAPAVGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...GACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATCAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCATCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS TCA 90 bp TCTGGGTGGCGAGACACCAGCTGCCAAGAGATGAGAAAGGGGTCCTaGAGCAGGTGGAGATCCTGGAGTCCCAGGAGGTCCCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: SGWRDTSCQEMRKGS*SRWRSWSPRRSQPG
Trigger: GCCAGGTTGGGACCTCCTGGGACTCCAGGATCTCCACCTGCTTCAGGACCCCTTTCTCATCTCTTGGCAGCTGGTGTCTCGCCACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 90 bp TTCTGGTTCCACTGGAGTGGGTGCTACAGACGGCGGGGAACAGGGTaGAAGGCCCTTTCTGGGTGGCGAGACACCAGCTGCCAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FWFHWSGCYRRRGTG*KALSGWRDTSCQEM
Trigger: CATCTCTTGGCAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCATGGAGACCATGTCATaGGGGTCCAGGAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: QNCSLGTALGAANRALTCMETMS*GSRRAG
Trigger: CCCCGCTCTCCTGGACCCCAATGACATGGTCTCCAT...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp GGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GIQPALNGIHLSMDVLLRAGAAA*AVRRAQ
Trigger: CTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGC...CCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CAA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAGCCAGCTCCTGTAGTTaGCCAGGAACCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRASSCS*PGTRGL
Trigger: CAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGC...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCCCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: CRSSSRQLMIALRCSMRVPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...GACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCTGCTGGTTTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: GRAGCARGRALLCLGAAGLKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...ACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TGCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: CTCSLAGALRRQALHAERWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...GCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTTCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: APAVWLALSDDRLSTLSASFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CACGCTGAGCGCTGGCGATGGTGTGGCCGAGGGCGGCTCCGAGTGCGAGAGGCGTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 5 (lower is better)
Translates to: HAERWRWCGRGRLRVREAWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...CGCCTCTCGCACTCGGAGCCGCCCTCGGCCACACCATCGCCAGCGCTCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGACGCGCTGGGTGCGCGCGGGGCAGGGCGCTTCTTTGTCTTGGGGCTGCTGGTCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: GRAGCARGRALLCLGAAGLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...ACCAGCAGCCCCAAGACAAAGAAGCGCCCTGCCCCGCGCGCACCCAGCGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTCCACTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LRGAGRPLQTEHSPGAAPLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...TGGAGCAGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCACCCTGGGACCCTATTaGCCCCTTGGGTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: QNCSLGTALGAANRALTCTLGPY*PLGSVT
Trigger: TGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS CCA 90 bp CTCTGTGCCGGGAACTGTGCTACTGTCCGGAGACAAGCTCCTATTTaGGGGTCAGAGAAGTGGGGGTTCACCTGCACACCCGGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LCAGNCATVRRQAPI*GSEKWGFTCTPGAR
Trigger: CCTTGCTCCGGGTGTGCAGGTGAACCCCCACTTCTCTGACCCCCAAATAGGAGCTTGTCTCCGGACAGTAGCACAGTTCCCGGCACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 90 bp AGCCATCACCTAAAGGCAGACCACCTAATGCAGTGGGACAGGAGCTaGCTCCCGCTTCACACGGGCCCGGGGACGCTTCCAGTTTTAAGC +
Preference number: 5 (lower is better)
Translates to: SHHLKADHLMQWDRS*LPLHTGPGTLPVLS
Trigger: GCTTAAAACTGGAAGCGTCCCCGGGCCCGTGTGAAGCGGGAGCCAGCTCCTGTCCCACTGCATTAGGTGGTCTGCCTTTAGGTGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CCA 90 bp TTTGAGACCTGTAGCCATCACCTAAAGGCAGACCACCTAATGCAGTaGGACAGGAGCTGGCTCCCGCTTCACACGGGCCCGGGGACGCTT +
Preference number: 5 (lower is better)
Translates to: FETCSHHLKADHLMQ*DRSWLPLHTGPGTL
Trigger: AAGCGTCCCCGGGCCCGTGTGAAGCGGGAGCCAGCTCCTGTCCCACTGCATTAGGTGGTCTGCCTTTAGGTGATGGCTACAGGTCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATGGCGAGACACCAGCTaGGCCAGGACTGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEWRDTS*ARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCCAGCTCCTGTAGTTaGCCAGGAACCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEASSCS*PGTRGL
Trigger: CAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CAA 90 bp TCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCCAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SSSRQLMIALRCSMRVTSQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...GCTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGCCAGGGAGGAGTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCTTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: GQGGVGREADRVSRGTRGLSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...GCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAACTCCTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGACCCTATTTGCCCCTaGGGTCCGTCACAGCATCCG +
Preference number: 5 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEDPICP*GPSQHP
Trigger: CGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACCCTGGGACCCTATTaGCCCCTTGGGTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRTLGPY*PLGSVT
Trigger: TGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGAGAGAGGGATGGATTaGCCCGTCAGGCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: QNCSLGTALGAANRALTCERGMD*PVRPIH
Trigger: GTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS TCA 90 bp AGGGGGTCCCATGGAACTCTCAGAGGCGGCCAGACCCAGCCATGGTaGAGGTTAGGGCCAAAAACCCAGCTCAGGGTATCAGAAGACTGG +
Preference number: 5 (lower is better)
Translates to: RGSHGTLRGGQTQPW*RLGPKTQLRVSEDW
Trigger: CCAGTCTTCTGATACCCTGAGCTGGGTTTTTGGCCCTAACCTTCACCATGGCTGGGTCTGGCCGCCTCTGAGAGTTCCATGGGACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402631.1
CDS GCA 90 bp TTCTGGTTCCACTGGAGTGGGTGCTACAGACGGCGGGGAACAGGGTaGAAGGCCCTTTCTGGGTGGCGAGACACCAGCAAACGGTTATTC +
Preference number: 5 (lower is better)
Translates to: FWFHWSGCYRRRGTG*KALSGWRDTSKRLF
Trigger: GAATAACCGTTTGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS GCA 90 bp TTATTGAGGAGGCACCGGAGCTCATACTCGACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTGAAGCATTCAGGCCGCCACGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLRRHRSSYSTSAWR*SRFCCLKHSGRHAA
Trigger: AGCTGCGTGGCGGCCTGAATGCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAATAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS CCA 90 bp TCTGGCTTATTGAGGAGGCACCGGAGCTCATACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGCTGCTTGAAGCATTCAGGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: SGLLRRHRSSYSTSA*RCSRFCCLKHSGRH
Trigger: GTGGCGGCCTGAATGCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAATAAGCCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS-3UTR CAA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTAGAAA*AVRRAQ
Trigger: CTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGC...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACAGCCAGCTCCTGTAGTTaGCCAGGAACCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: NCEGERDGFARQAHSRLTASSCS*PGTRGL
Trigger: CAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGC...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: ELPLLLALRFSLPLELFLQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...AAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGAWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGAGCTTCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: TDLRGAGRPLQTEHSPGASFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...AGCTCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GTTGGTAGAGAGGCTGACAGGGTTTCCAGGGGTACCAGGGGCATGGACAGCAGGAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGREADRVSRGTRGMDSRNFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...CCTGCTGTCCATGCCCCTGGTACCCCTGGAAACCCTGTCAGCCTCTCTACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCCTGTCTCCAACCAACAAGAGAGGCGTTGGGGTGGCGCCACTGCAGGGCTTGCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLSPTNKRGVGVAPLQGLLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...CAAGCCCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGGTTGGAGACAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCCACGCAGCTTCTCCTCCAGCAGCACCCCACGGTGCTCCAGGGCATCCAGCCGTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCT +
Preference number: 5 (lower is better)
Translates to: ATQLLLQQHPTVLQGIQPSKTLS*ESESKS
Trigger: AGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGA...CGGCTGGATGCCCTGGAGCACCGTGGGGTGCTGCTGGAGGAGAAGCTGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDAGAAA*AVRRAQ
Trigger: CTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGGCCAGCTCCTGTAGTTaGCCAGGAACCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKASSCS*PGTRGL
Trigger: CAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGC...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CAA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TVLQGIQPALNGIHLSMDAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...ATCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCACCTGCAGTCTGGCTGGCGCTCTCAGACGACAGGCTCTCCACGCTGAGCGCTTTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: APAVWLALSDDRLSTLSALKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...AGCGCTCAGCGTGGAGAGCCTGTCGTCTGAGAGCGCCAGCCAGACTGCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAAGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PWDPICPLGPSQHPQSSEAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACAGACCCTATTTGCCCCTaGGGTCCGTCACAGCATCCG +
Preference number: 5 (lower is better)
Translates to: NCEGERDGFARQAHSRLTDPICP*GPSQHP
Trigger: CGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTC...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCGCAGGGCACTGGCAGTaGAGGTTGTCTGTTTATTGG +
Preference number: 5 (lower is better)
Translates to: QNCSLGTALGAANRALTCAGHWQ*RLSVYW
Trigger: CCAATAAACAGACAACCTCAACTGCCAGTGCCCTGC...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp AACTGTGAGGGAGAGAGGGATGGATTTGCCCGTCAGGCCCATTCACGTCTGACAGGGCAGAGATCCCTCTaGGAGGATGGCCCCAACATG +
Preference number: 5 (lower is better)
Translates to: NCEGERDGFARQAHSRLTGQRSL*EDGPNM
Trigger: CATGTTGGGGCCATCCTCCAAGAGGGATCTCTGCCC...TGTCAGACGTGAATGGGCCTGACGGGCAAATCCATCCCTCTCTCCCTCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS TCA 90 bp CTTGGATCCCTTGGTGGCCTTCTTTGTGGCTGGGGACGCTGCAGGTaGTGGCTTCCGGTTAAAAGGATTCTCCTTGCAGGAGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: LGSLGGLLCGWGRCR*WLPVKRILLAGGLQ
Trigger: CTGCAGTCCTCCTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGGGATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445494.6
CDS GCA 90 bp AGAAAGGAACCATATGGTGCTGCCCTGACAGCTCAGGAAAGGCGCTaGCTCCTTGGGGTTGACAAGGAGCTGTCCTGCCTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: RKEPYGAALTAQERR*LLGVDKELSCLSPS
Trigger: ACTTGGGGATAGGCAGGACAGCTCCTTGTCAACCCCAAGGAGGCAGCGCCTTTCCTGAGCTGTCAGGGCAGCACCATATGGTTCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGCCTCCTGGAACATCCTaGGCATCTTCTGCGAGTTGC +
Preference number: 5 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEPPGTS*ASSASC
Trigger: GCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGG...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CAA 90 bp TCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGCCTCCTGGAACATCCTaGGCATCTTCTGCGAGTTGC +
Preference number: 5 (lower is better)
Translates to: SLCRSSSRQLMIALRCSMPPGTS*ASSASC
Trigger: GCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGG...CATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000680375.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCCAGGAACCCGGGGCTaGGTAGGGATCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMPGTRG*VGICGR
Trigger: CCGGCCGCAGATCCCTACCAAGCCCCGGGTTCCTGG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCAACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: CRSSSRQLMIALRCSMRVAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...GACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LPVLIQAVDDSVALLNEGTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...ACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PLPVLIQAVDDSVALLNEAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: HISCRKGGGPHHSSSPIASSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp GTGGCTGGGGACGCTGCAGGTGATGGCTTCCGGTTAAAAGGATTCTCCTTGCAGTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VAGDAAGDGFRLKGFSLQSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...CTGCAAGGAGAATCCTTTTAACCGGAAGCCATCACCTGCAGCGTCCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: HISCRKGGGPHHSSSPIANFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp ACCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGATTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: TLGPYLPLGSVTASAVIRLSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...TCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGCTGGCGCTCTCAGACGTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: QLAAPEALHLQSGWRSQTLFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...CGTCTGAGAGCGCCAGCCAGACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACAGGGGTGCAGGGACTaGGGTGTGGACTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSQGCRD*GVDSGW
Trigger: CCACCCGGAGTCCACACCCAAGTCCCTGCACCCCTG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCCGGCGCTCAATGGTATCCATCTCTCCATGGATGTCCTCCTCAGGGATGTACTGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: AGAQWYPSLHGCPPQGCTAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...AGTACATCCCTGAGGAGGACATCCATGGAGAGATGGATACCATTGAGCGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTNFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGACTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HISCRKGGGPHHSSSPIALGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp TGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CRSSSRQLMIALRCSMRVLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...GACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGTTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: PLPVLIQAVDDSVALLNELSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...CTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATCTGCCCCTGCCAGCTTaGTCTCCTGACACCGAAACA +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDLPLPA*SPDTET
Trigger: TGTTTCGGTGTCAGGAGACAAAGCTGGCAGGGGCAG...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS CCA 90 bp CAAATGGGGAGAGTGACTCCTACTGCACAGAGCCAATCCGAACAATaGCGCAACAGTACGATCACAGAACACAGCACCCGCGTGTGGCTA +
Preference number: 5 (lower is better)
Translates to: QMGRVTPTAQSQSEQ*RNSTITEHSTRVWL
Trigger: TAGCCACACGCGGGTGCTGTGTTCTGTGATCGTACTGTTGCGCCATTGTTCGGATTGGCTCTGTGCAGTAGGAGTCACTCTCCCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCGGTGTCCCCCTCGGCTaGGGGACAGGCAGTTCGTGC +
Preference number: 5 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPGVPLG*GTGSSC
Trigger: GCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACC...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCACTCCAGGCTGGCCGTaGGGCTCGGCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFTPGWP*GSAGPP
Trigger: AGGTGGCCCAGCCGAGCCCAACGGCCAGCCTGGAGT...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATAGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LILDISLALLQVLLLEDIAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCCCAGGATGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 5 (lower is better)
Translates to: LTDLRGAGRPLQTEHSPGWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...TCCTGGGCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp TCTGAGGAGCTCTTGGGCACAGCTGGCGGCTCCAGAAGCTCTGCACCTGCAGTCTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 5 (lower is better)
Translates to: SEELLGTAGGSRSSAPAVWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...GACTGCAGGTGCAGAGCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTGCTGCTTGAAGACATAAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LILDISLALLQVLLLEDINFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...TATGTCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKNFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CAGAACTGCAGCCTGGGGACAGCACTGGGAGCAGCTAACAGAGCACTCACCTGCCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: QNCSLGTALGAANRALTCLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...GCAGGTGAGTGCTCTGTTAGCTGCTCCCAGTGCTGTCCCCAGGCTGCAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp AGCTGGGGCCGCCTCCTGGAACATCCTTGGCATCTTCTGCGAGTTGCTGCTGGTCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: SWGRLLEHPWHLLRVAAGLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...ACCAGCAGCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGGCGGCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS-3UTR CAA 90 bp AGGAAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTTTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: RKRPSPRGSLPLVIFLLTLSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...AGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS TCA 90 bp GAGAGAGCAAAGACAGAGGCTCCAAGTCAACTGTTCCGGGGAGTCTaGATGCATTTTCCCATGAGAACCTCATTGGGCAGCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ERAKTEAPSQLFRGV*MHFPMRTSLGSSGQ
Trigger: CTGCCCAGAGCTGCCCAATGAGGTTCTCATGGGAAAATGCATTCAGACTCCCCGGAACAGTTGACTTGGAGCCTCTGTCTTTGCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 90 bp ACCAGCTCTGGGACAGGCACTGCCGGGCACCAATTTATCTCCTCGTaGCTGATGGATATGATGCTTCCAAACACATTATCCAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: TSSGTGTAGHQFISS*LMDMMLPNTLSSGD
Trigger: GTCCCCACTGGATAATGTGTTTGGAAGCATCATATCCATCAGCCACGAGGAGATAAATTGGTGCCCGGCAGTGCCTGTCCCAGAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680578.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMAGAAA*AVRRAQ
Trigger: CTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGC...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACTTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHLKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: PWDPICPLGPSQHPQSSELKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp TGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCACCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WGTCSWHHVCFLAVSTSSPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp AAGAGGCCATCACCCAGAGGATCCCTCCCCTTAGTCATCTTCCTCCTGACTGATTCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KRPSPRGSLPLVIFLLTDSFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...ATCAGTCAGGAGGAAGATGACTAAGGGGAGGGATCCTCTGGGTGATGGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGGTCACAAGCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VLIQAVDDSVALLNEGHKQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...CTTGTGACCCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CACATTTCCTGCAGAAAAGGTGGCGGTCCCCATCACTCCTCCTCTCCCATAGCCGAGGTTGTCTGTTTATaGGTGAGGAAACTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: HISCRKGGGPHHSSSPIAEVVCL*VRKLLE
Trigger: CTCGAGGAGTTTCCTCACCAATAAACAGACAACCTC...GGCTATGGGAGAGGAGGAGTGATGGGGACCGCCACCTTTTCTGCAGGAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215957.10
CDS-3UTR CAA 90 bp CACGGTGCTCCAGGGCATCCAGCCGGCGCTCAATGGTATCCATCTCTCCATGGATCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCT +
Preference number: 5 (lower is better)
Translates to: HGAPGHPAGAQWYPSLHGSKTLS*ESESKS
Trigger: AGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGA...TCCATGGAGAGATGGATACCATTGAGCGCCGGCTGGATGCCCTGGAGCACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679832.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACAGCTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: FLLTDLRGAGRPLQTEHSLFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...GCTGTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGTGGCGAGACACCAGCTaGGCCAGGACTGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMWRDTS*ARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCA...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGCCAACAAGAGAGGCGTaGGGGTGGCGCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLLASRLFPSSFNIFMVLPTREA*GWRHCR
Trigger: CCTGCAGTGGCGCCACCCCAACGCCTCTCTTGTTGG...CAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRLKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTGGTCAGCCTGGACCTaGCGTTTGATGAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSWSAWT*RLMSGK
Trigger: CTTTCCACTCATCAAACGCAAGGTCCAGGCTGACCA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGAACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LNFPFFLPSGSASLWNSFQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...GAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCCAGGTTCTGCTGCTaGAAGCATTCAGGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSRFCC*KHSGRH
Trigger: GTGGCGGCCTGAATGCTTCAAGCAGCAGAACCTGGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS-3UTR CAA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCCAGTCCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSSPGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGGACTGGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680501.1
CDS-3UTR CAA 90 bp ATCTTCCTCCTGACTGATCTGAGGGGAGCAGGGCGCCCCCTTCAAACAGAGCACTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCT +
Preference number: 5 (lower is better)
Translates to: IFLLTDLRGAGRPLQTEHSKTLS*ESESKS
Trigger: AGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGA...GTGCTCTGTTTGAAGGGGGCGCCCTGCTCCCCTCAGATCAGTCAGGAGGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CCCTGGGACCCTATTTGCCCCTTGGGTCCGTCACAGCATCCGCAGTCATCAGAATTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: PWDPICPLGPSQHPQSSELFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...TTCTGATGACTGCGGATGCTGTGACGGACCCAAGGGGCAAATAGGGTCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215957.10
ENST00000424008.2
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGGGCGCTTCTTTGTCTaGGGGCTGCTGGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNGRFFV*GLLVGV
Trigger: CACCCCTACCAGCAGCCCCAAGACAAAGAAGCGCCC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCCTTGGTGGCCTTCTTaGTGGCTGGGGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNPWWPS*WLGTLQ
Trigger: CTGCAGCGTCCCCAGCCACAAAGAAGGCCACCAAGG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATGAGGTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 5 (lower is better)
Translates to: LCRSSSRQLMIALRCSMRWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...CCTCATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS GCA 90 bp CCCCAACTGGCTTCTCGTGCTGTTAGCTCTTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCA +
Preference number: 5 (lower is better)
Translates to: PQLASRAVSSCLWGT*SWHHVCFLAVSTSS
Trigger: TGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAACAGCACGAGAAGCCAGTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215957.10
ENST00000402631.1
ENST00000424008.2
CDS GCA 90 bp ATGAACCTCACTGAACCTCCATCAAATGGGGAGAGTGACTCCTACTaGACAGAGCCAATCCGAACAATGGCGCAACAGTACGATCACAGA +
Preference number: 5 (lower is better)
Translates to: MNLTEPPSNGESDSY*TEPIRTMAQQYDHR
Trigger: TCTGTGATCGTACTGTTGCGCCATTGTTCGGATTGGCTCTGTGCAGTAGGAGTCACTCTCCCCATTTGATGGAGGTTCAGTGAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CCA 90 bp ACCAGCTCTGGGACAGGCACTGCCGGGCACCAATTTATCTCCTCGTaGCTGATGGATATGATGCTTCCAAACACATTATCTGCATTTTCC +
Preference number: 5 (lower is better)
Translates to: TSSGTGTAGHQFISS*LMDMMLPNTLSAFS
Trigger: GGAAAATGCAGATAATGTGTTTGGAAGCATCATATCCATCAGCCACGAGGAGATAAATTGGTGCCCGGCAGTGCCTGTCCCAGAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402631.1
CDS-3UTR CAA 90 bp CTCCCTCTGCCGGTCCTCATCCAGGCAGTTGATGATAGCGTTGCGCTGCTCAATTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: LPLPVLIQAVDDSVALLNLFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...ATTGAGCAGCGCAACGCTATCATCAACTGCCTGGATGAGGACCGGCAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGCTGGTGCTGCTGCTTaGGCTGTGAGAAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLAGAAA*AVRRAQ
Trigger: CTGGGCCCTTCTCACAGCCAAAGCAGCAGCACCAGC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CAA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGCCAGCTCCTGTAGTTaGCCAGGAACCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFASSCS*PGTRGL
Trigger: CAAGCCCCGGGTTCCTGGCAAACTACAGGAGCTGGC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACGGGCTGGCTTCTTCTTaGGTTCTGCCTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNGLASS*VLPAPA
Trigger: CGCTGGTGCAGGCAGAACCAAAGAAGAAGCCAGCCC...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCGGTGGCCTCACTGGCTaGGATCCCTTGGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFGGLTG*DPLVAF
Trigger: GAAGGCCACCAAGGGATCCAAGCCAGTGAGGCCACC...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TGTCTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCCTTTTCTGGCTTATaGAGGAGGCACCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLWGTCSWHHVCFLAVSTSFSGL*RRHRSS
Trigger: TGAGCTCCGGTGCCTCCTCAATAAGCCAGAAAAGGA...TGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000681920.1
CDS CCA 90 bp CTGGCTTCTCGTGCTGTTAGCTCTTGTCTCTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCT +
Preference number: 5 (lower is better)
Translates to: LASRAVSSCLWGTCS*HHVCFLAVSTSSWS
Trigger: AGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAACAGCACGAGAAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215957.10
ENST00000402631.1
ENST00000424008.2
CDS-3UTR CAA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCATGGAGACCATGTCATaGGGGTCCAGGAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFMETMS*GSRRAG
Trigger: CCCCGCTCTCCTGGACCCCAATGACATGGTCTCCAT...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGATGGAGACCATGTCATaGGGGTCCAGGAGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLMETMS*GSRRAG
Trigger: CCCCGCTCTCCTGGACCCCAATGACATGGTCTCCAT...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTGGCGAGACACCAGCTaGGCCAGGACTGCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLWRDTS*ARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTCCTCATCCAGGCAGTaGATGATAGCGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPSSSRQ*MIALRC
Trigger: GCAGCGCAACGCTATCATCAACTGCCTGGATGAGGA...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCCCTCCTGGAACATCCTaGGCATCTTCTGCGAGTTGC +
Preference number: 5 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFPPGTS*ASSASC
Trigger: GCAACTCGCAGAAGATGCCAAGGATGTTCCAGGAGG...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACACTGGCTTGGATCCCTaGGTGGCCTTCTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNTGLDP*VAFFVA
Trigger: AGCCACAAAGAAGGCCACCAAGGGATCCAAGCCAGT...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTGGAACTCTTTCTTCTTGATCATGGCTTCCAACATCTTGTCTTCCTCTTCCTCCAGTTGATGATAGCGTaGCGCTGCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LELFLLDHGFQHLVFLFLQLMIA*RCSMRV
Trigger: GACCCTCATTGAGCAGCGCAACGCTATCATCAACTG...GAGGAAGAGGAAGACAAGATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCAACTTCCCCTTCTTCTaGCCCTCAGGTTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRLFPSSFNIFMVLNFPFNFPFF*PSGSAS
Trigger: GGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGTT...GAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: DLLLASRLFPSSFNIFMVLSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...GACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp ACTTCCCCTTCTTCTTGCCCTCAGGTTCAGCCTCCCTCTGGAACTCTTTCTTCTTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: TSPSSCPQVQPPSGTLSSLFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...AGAAGAAAGAGTTCCAGAGGGAGGCTGAACCTGAGGGCAAGAAGAAGGGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGCTGGCTTGAGGCATTaGTTCCACTCTAGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLAGLRH*FHSRLH
Trigger: GTGGAGCCTAGAGTGGAACAAATGCCTCAAGCCAGC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGGCCTGGACCTTGCGTTaGATGAGTGGAAAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLAWTLR*MSGKPC
Trigger: ACACGGCTTTCCACTCATCAAACGCAAGGTCCAGGC...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTGGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LWGTCSWHHVCFLAVSTSLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACCTGGGGGACTTGCTCTaGGCATCACGTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNLGDLL*ASRLFP
Trigger: AGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAG...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp CTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTGTCTCTGGGGGACTaGCTCTTGGCATCACGTTTG +
Preference number: 5 (lower is better)
Translates to: LLASRLFPSSFNIFMVLNLSLGD*LLASRL
Trigger: CAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAA...GTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGCTCTTGGCATCACGTTaGTTTCCTAGCAGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMLLASR*FPSSFN
Trigger: GTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAG...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGTGGAACTCTTTCTTCTaGATCATGGCTTCCAACATC +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMWNSFF*IMASNI
Trigger: GATGTTGGAAGCCATGATCAAGAAGAAAGAGTTCCA...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GGGGACTTGCTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCT +
Preference number: 5 (lower is better)
Translates to: GDLLLASRLFPSSFNIFMSKTLS*ESESKS
Trigger: AGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGA...CATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp GCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCA +
Preference number: 5 (lower is better)
Translates to: ASRLFPSSFNIFMVLNFPLFSKT*SLESES
Trigger: TGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAA...GGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCCCCTTCTTCTTGTTAAAAGGATTCTCCTaGCAGGAGGACTTTACCTGC +
Preference number: 5 (lower is better)
Translates to: LFPSSFNIFMVLNFPFFLLKGFS*QEDFTC
Trigger: GCAGGTAAAGTCCTCCTGCAAGGAGAATCCTTTTAA...CAAGAAGAAGGGGAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS-3UTR CAA 90 bp TTGGCATCACGTTTGTTTCCTAGCAGTTTCAACATCTTCATGGTCTTGAACTTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCT +
Preference number: 5 (lower is better)
Translates to: LASRLFPSSFNIFMVLNFSKTLS*ESESKS
Trigger: AGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGA...GAAGTTCAAGACCATGAAGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000681920.1
CDS GCA 72 bp TTGCGCGCCCCACCTGCGTGCCCCACTGAGGAGGGCTaGAGGGCCATCGAGCACACACCCGGGAGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LRAPPACPTEEG*RAIEHTPGRQG
Trigger: GCCCTGCCTCCCGGGTGTGTGCTCGATGGCCCTGCAGCCCTCCTCAGTGGGGCACGCAGGTGGGGCGCGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 72 bp TGCCCACCACTTCCACCCAGACAGGCCAGCCTCAGCTaGGGTCCCAGGGCTCCGCTCAGACCCCCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: CPPLPPRQASLS*GPRAPLRPPEH
Trigger: GTGCTCAGGGGGTCTGAGCGGAGCCCTGGGACCCCAGCTGAGGCTGGCCTGTCTGGGTGGAAGTGGTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402631.1
CDS CCA 72 bp AGCCCCCTCCCTGGTTTCGGGGGTAACACGCGGCCCTaGCCACTCACCGGAAGCAGTGGCGATGGTACAGCC +
Preference number: 6 (lower is better)
Translates to: SPLPGFGGNTRP*PLTGSSGDGTA
Trigger: GGCTGTACCATCGCCACTGCTTCCGGTGAGTGGCCAGGGCCGCGTGTTACCCCCGAAACCAGGGAGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CCA 72 bp GTGTCCCCTCGGACGGCTTCGGTGTCCCCCTCGGCTTaGGGACAGGCAGTTCGTGCAGTCTCCCGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: VSPRTASVSPSA*GQAVRAVSRKQ
Trigger: CTGCTTCCGGGAGACTGCACGAACTGCCTGTCCCCAAGCCGAGGGGGACACCGAAGCCGTCCGAGGGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS GCA 72 bp GGAGTCTTCCCAACATTGCCGGCCTGTGACTCCTCTTaGGCGCCCCACCTGCGTGCCCCACTGAGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GVFPTLPACDSS*APHLRAPLRRA
Trigger: AGCCCTCCTCAGTGGGGCACGCAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS GCA 72 bp CCTCAGGCCCATTCTCATAAGCCCCAGGGAGCAGGGTaGTGGAGCACCGCCGACACCTTGGCCAGGACTGCA +
Preference number: 6 (lower is better)
Translates to: PQAHSHKPQGAG*WSTADTLARTA
Trigger: TGCAGTCCTGGCCAAGGTGTCGGCGGTGCTCCAGCACCCTGCTCCCTGGGGCTTATGAGAATGGGCCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS TCA 72 bp TCGGATCCTAGGAGTCTTCCCAACATTGCCGGCCTGTaGCTCCTCTTGCGCGCCCCACCTGCGTGCCCCACT +
Preference number: 6 (lower is better)
Translates to: SDPRSLPNIAGL*LLLRAPPACPT
Trigger: AGTGGGGCACGCAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCCTAGGATCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 72 bp AGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTGGGTaGCGAGACACCAGCTTGGCCAGGACTGCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: RRRGTGCKALSG*RDTSLARTAEV
Trigger: CACTTCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000681920.1
CDS CCA 72 bp CTACAGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCTTGGCCAGGACTGCAGA +
Preference number: 6 (lower is better)
Translates to: LQTAGNRVQGPF*VARHQLGQDCR
Trigger: TCTGCAGTCCTGGCCAAGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000681920.1
CDS CCA 72 bp GAGCTCCTCGCCCTGAGCCACATCTTCTGGTTCCACTaGAGTGGGTGCTACAGACGGCGGGGAACAGGGTGC +
Preference number: 6 (lower is better)
Translates to: ELLALSHIFWFH*SGCYRRRGTGC
Trigger: GCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAGGGCGAGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000680868.1
ENST00000681920.1
CDS GCA 72 bp GCCCTGAGCCACATCTTCTGGTTCCACTGGAGTGGGTaGTACAGACGGCGGGGAACAGGGTGCAAGGCCCTT +
Preference number: 6 (lower is better)
Translates to: ALSHIFWFHWSG*YRRRGTGCKAL
Trigger: AAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAGCACCCACTCCAGTGGAACCAGAAGATGTGGCTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000454685.6
ENST00000679832.1
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000680868.1
ENST00000681920.1
CDS GCA 72 bp TGGCCACTCACCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACAT +
Preference number: 6 (lower is better)
Translates to: WPLTGSSGDGTA*RQPGSAAPSAH
Trigger: ATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGTGAGTGGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 72 bp GTGCAGTCTCCCGGAAGCAGTGGCGATGGTACAGCCTaGCGTCAGCCAGGTAGCGCTGCACCAAGTGCACAT +
Preference number: 6 (lower is better)
Translates to: VQSPGSSGDGTA*RQPGSAAPSAH
Trigger: ATGTGCACTTGGTGCAGCGCTACCTGGCTGACGGCAGGCTGTACCATCGCCACTGCTTCCGGGAGACTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681920.1
CDS CAA 90 bp ACCCGGTTGGTGTCTATCAATCGGATCCTAGGAGTCTTCCCAACATaGCCGGCCTGTGACTCCTCTTGCGCGCCCCACCTGCGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: TRLVSINRILGVFPT*PACDSSCAPHLRAP
Trigger: TGGGGCACGCAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCCTAGGATCCGATTGATAGACACCAACCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS GCA 72 bp AGGCACCGGAGCTCATACTCGACATCAGCCTGGCGCTaGTCCAGGTTCTGCTGCTTGAAGCATTCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: RHRSSYSTSAWR*SRFCCLKHSGR
Trigger: GCGGCCTGAATGCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS CCA 72 bp TGTAGCCATCACCTAAAGGCAGACCACCTAATGCAGTaGGACAGGAGCTGGCTCCCGCTTCACACGGGCCCG +
Preference number: 6 (lower is better)
Translates to: CSHHLKADHLMQ*DRSWLPLHTGP
Trigger: CGGGCCCGTGTGAAGCGGGAGCCAGCTCCTGTCCCACTGCATTAGGTGGTCTGCCTTTAGGTGATGGCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CAA 90 bp CCTCTGTGCCGGGAACTGTGCTACTGTCCGGAGACAAGCTCCTATTaGGGGGTCAGAGAAGTGGGGGTTCACCTGCACACCCGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: PLCRELCYCPETSSY*GVREVGVHLHTRSK
Trigger: CTTGCTCCGGGTGTGCAGGTGAACCCCCACTTCTCTGACCCCCAAATAGGAGCTTGTCTCCGGACAGTAGCACAGTTCCCGGCACAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS TCA 72 bp CCTGACAGCTCAGGAAAGGCGCTGCCTCCTTGGGGTTaGCAAGGAGCTGTCCTGCCTATCCCCAAGTGGGTA +
Preference number: 6 (lower is better)
Translates to: PDSSGKALPPWG*QGAVLPIPKWV
Trigger: TACCCACTTGGGGATAGGCAGGACAGCTCCTTGTCAACCCCAAGGAGGCAGCGCCTTTCCTGAGCTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 72 bp CCATATGGTGCTGCCCTGACAGCTCAGGAAAGGCGCTaGCTCCTTGGGGTTGACAAGGAGCTGTCCTGCCTA +
Preference number: 6 (lower is better)
Translates to: PYGAALTAQERR*LLGVDKELSCL
Trigger: TAGGCAGGACAGCTCCTTGTCAACCCCAAGGAGGCAGCGCCTTTCCTGAGCTGTCAGGGCAGCACCATATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 72 bp GGGCAGCTCTGGGCAGGAAGGGGCCATTTCACAACCTaGAGCACCCGGTTGGTGTCTATCAATCGGATCCTA +
Preference number: 6 (lower is better)
Translates to: GQLWAGRGHFTT*STRLVSINRIL
Trigger: TAGGATCCGATTGATAGACACCAACCGGGTGCTGCAGGTTGTGAAATGGCCCCTTCCTGCCCAGAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS GCA 72 bp GAATGCAGTAGCACGATCTCGGCTTCCTGTAACCTCTaGCTCCCGGGTTTGAGCGATTCTCCTGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ECSSTISASCNL*LPGLSDSPASA
Trigger: GGCTGAGGCAGGAGAATCGCTCAAACCCGGGAGGCAGAGGTTACAGGAAGCCGAGATCGTGCTACTGCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 72 bp TCATACTCGACATCAGCCTGGCGCTGCTCCAGGTTCTaGTGCTTGAAGCATTCAGGCCGCCACGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SYSTSAWRCSRF*CLKHSGRHAAS
Trigger: AGAAGCTGCGTGGCGGCCTGAATGCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS CCA 72 bp GGGAACTGTGCTACTGTCCGGAGACAAGCTCCTATTTaGGGGTCAGAGAAGTGGGGGTTCACCTGCACACCC +
Preference number: 6 (lower is better)
Translates to: GNCATVRRQAPI*GSEKWGFTCTP
Trigger: GGGTGTGCAGGTGAACCCCCACTTCTCTGACCCCCAAATAGGAGCTTGTCTCCGGACAGTAGCACAGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 72 bp AGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTGGGTaGCGAGACACCAGCAAACGGTTATTCTCGAAGACA +
Preference number: 6 (lower is better)
Translates to: RRRGTGCKALSG*RDTSKRLFSKT
Trigger: TGTCTTCGAGAATAACCGTTTGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS CCA 72 bp CTACAGACGGCGGGGAACAGGGTGCAAGGCCCTTTCTaGGTGGCGAGACACCAGCAAACGGTTATTCTCGAA +
Preference number: 6 (lower is better)
Translates to: LQTAGNRVQGPF*VARHQQTVILE
Trigger: TTCGAGAATAACCGTTTGCTGGTGTCTCGCCACCCAGAAAGGGCCTTGCACCCTGTTCCCCGCCGTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS CAA 72 bp CGGGAACTGTGCTACTGTCCGGAGACAAGCTCCTATTaGGGGGTCAGAGAAGTGGGGGTTCACCTGCACACC +
Preference number: 6 (lower is better)
Translates to: RELCYCPETSSY*GVREVGVHLHT
Trigger: GGTGTGCAGGTGAACCCCCACTTCTCTGACCCCCAAATAGGAGCTTGTCTCCGGACAGTAGCACAGTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CAA 72 bp GTGTCTATCAATCGGATCCTAGGAGTCTTCCCAACATaGCCGGCCTGTGACTCCTCTTGCGCGCCCCACCTG +
Preference number: 6 (lower is better)
Translates to: VSINRILGVFPT*PACDSSCAPHL
Trigger: CAGGTGGGGCGCGCAAGAGGAGTCACAGGCCGGCAATGTTGGGAAGACTCCTAGGATCCGATTGATAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CAA 90 bp CAGCTCTGGGCAGGAAGGGGCCATTTCACAACCTGCAGCACCCGGTaGGTGTCTATCAATCGGATCCTAGGAGTCTTCCCAACATTGCCG +
Preference number: 6 (lower is better)
Translates to: QLWAGRGHFTTCSTR*VSINRILGVFPTLP
Trigger: CGGCAATGTTGGGAAGACTCCTAGGATCCGATTGATAGACACCAACCGGGTGCTGCAGGTTGTGAAATGGCCCCTTCCTGCCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CCA 72 bp TTGAGGAGGCACCGGAGCTCATACTCGACATCAGCCTaGCGCTGCTCCAGGTTCTGCTGCTTGAAGCATTCA +
Preference number: 6 (lower is better)
Translates to: LRRHRSSYSTSA*RCSRFCCLKHS
Trigger: TGAATGCTTCAAGCAGCAGAACCTGGAGCAGCGCCAGGCTGATGTCGAGTATGAGCTCCGGTGCCTCCTCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680375.1
CDS CAA 90 bp GGGTGGCGAGACACCAGCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTAGCAGGTCGGGCCGGTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: GWRDTSKRLFSKTLS*ESESKSSRSGRCRC
Trigger: GCACCGGCACCGGCCCGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGCTGGTGTCTCGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS TCA 72 bp GTCAACTGTTCCGGGGAGTCTGAATGCATTTTCCCATaGGAACCTCATTGGGCAGCTCTGGGCAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: VNCSGESECIFP*EPHWAALGRKG
Trigger: CCCCTTCCTGCCCAGAGCTGCCCAATGAGGTTCTCATGGGAAAATGCATTCAGACTCCCCGGAACAGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS CAA 72 bp GCAGGAAGGGGCCATTTCACAACCTGCAGCACCCGGTaGGTGTCTATCAATCGGATCCTAGGAGTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: AGRGHFTTCSTR*VSINRILGVFP
Trigger: TGGGAAGACTCCTAGGATCCGATTGATAGACACCAACCGGGTGCTGCAGGTTGTGAAATGGCCCCTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS TCA 72 bp AGGAAAGGAAAAGAAAGGAACCATATGGTGCTGCCCTaGCAGCTCAGGAAAGGCGCTGCCTCCTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: RKGKERNHMVLP*QLRKGAASLGL
Trigger: CAACCCCAAGGAGGCAGCGCCTTTCCTGAGCTGTCAGGGCAGCACCATATGGTTCCTTTCTTTTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CCA 72 bp AGAGTGACTCCTACTGCACAGAGCCAATCCGAACAATaGCGCAACAGTACGATCACAGAACACAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: RVTPTAQSQSEQ*RNSTITEHSTR
Trigger: GCGGGTGCTGTGTTCTGTGATCGTACTGTTGCGCCATTGTTCGGATTGGCTCTGTGCAGTAGGAGTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS TCA 72 bp CCTTGGAAAGCGAATCAAAATCTCCTAAAGCACCGCTaGGCTGGAAGTTGTCATGTCCACCATCCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PWKANQNLLKHR*AGSCHVHHPLP
Trigger: GGGGAGGGGATGGTGGACATGACAACTTCCAGCTCAGCGGTGCTTTAGGAGATTTTGATTCGCTTTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454685.6
CDS CCA 72 bp CCCCAACTGGCTTCTCGTGCTGTTAGCTCTTGTCTCTaGGGGACTTGCTCTTGGCATCACGTTTGTTTCCTA +
Preference number: 6 (lower is better)
Translates to: PQLASRAVSSCL*GTCSWHHVCFL
Trigger: TAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAACAGCACGAGAAGCCAGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215957.10
ENST00000402631.1
ENST00000424008.2
CDS CAA 90 bp TCAGCCACTTCAAAGGCCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTAGCAGGTCGGGCCGGTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: SATSKAKRLFSKTLS*ESESKSSRSGRCRC
Trigger: GCACCGGCACCGGCCCGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGAAGTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000681920.1
CDS CAA 90 bp CTTTCTGGGTGGCGAGACACCAGCAAACGGTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCAAAATCTAGCAGGTCGGGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: LSGWRDTSKRLFSKT*SLESESKSSRSGRC
Trigger: GCACCGGCCCGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGCTGGTGTCTCGCCACCCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS TCA 72 bp AAGACAGAGGCTCCAAGTCAACTGTTCCGGGGAGTCTaGATGCATTTTCCCATGAGAACCTCATTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KTEAPSQLFRGV*MHFPMRTSLGS
Trigger: GCTGCCCAATGAGGTTCTCATGGGAAAATGCATTCAGACTCCCCGGAACAGTTGACTTGGAGCCTCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489812.1
CDS TCA 72 bp GCTTCCAGTTTTAAGCCAAGTGCTGAGGGCAAGCCATaGACCTCACTGAACCTCCATCAAATGGGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: ASSFKPSAEGKP*TSLNLHQMGRV
Trigger: CACTCTCCCCATTTGATGGAGGTTCAGTGAGGTTCATGGCTTGCCCTCAGCACTTGGCTTAAAACTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS GCA 72 bp ACTGAACCTCCATCAAATGGGGAGAGTGACTCCTACTaGACAGAGCCAATCCGAACAATGGCGCAACAGTAC +
Preference number: 6 (lower is better)
Translates to: TEPPSNGESDSY*TEPIRTMAQQY
Trigger: GTACTGTTGCGCCATTGTTCGGATTGGCTCTGTGCAGTAGGAGTCACTCTCCCCATTTGATGGAGGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680868.1
CDS CCA 72 bp GGGACAGGCACTGCCGGGCACCAATTTATCTCCTCGTaGCTGATGGATATGATGCTTCCAAACACATTATCC +
Preference number: 6 (lower is better)
Translates to: GTGTAGHQFISS*LMDMMLPNTLS
Trigger: GGATAATGTGTTTGGAAGCATCATATCCATCAGCCACGAGGAGATAAATTGGTGCCCGGCAGTGCCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680578.1
CDS GCA 72 bp GCTTCTCGTGCTGTTAGCTCTTGTCTCTGGGGGACTTaGTCTTGGCATCACGTTTGTTTCCTAGCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: ASRAVSSCLWGT*SWHHVCFLAVS
Trigger: TGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAACAGCACGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215957.10
ENST00000402631.1
ENST00000424008.2
CDS CCA 72 bp GGGACAGGCACTGCCGGGCACCAATTTATCTCCTCGTaGCTGATGGATATGATGCTTCCAAACACATTATCT +
Preference number: 6 (lower is better)
Translates to: GTGTAGHQFISS*LMDMMLPNTLS
Trigger: AGATAATGTGTTTGGAAGCATCATATCCATCAGCCACGAGGAGATAAATTGGTGCCCGGCAGTGCCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402631.1
CDS CAA 72 bp GACACCAGCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTAGCAGGTCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: DTSKRLFSKTLS*ESESKSSRSGR
Trigger: CCGGCCCGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGCTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS CCA 72 bp CGTGCTGTTAGCTCTTGTCTCTGGGGGACTTGCTCTTaGCATCACGTTTGTTTCCTAGCAGTTTCAACATCT +
Preference number: 6 (lower is better)
Translates to: RAVSSCLWGTCS*HHVCFLAVSTS
Trigger: AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCCAGAGACAAGAGCTAACAGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215957.10
ENST00000402631.1
ENST00000424008.2
CDS CAA 72 bp TCAAAGGCCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTAGCAGGTCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SKAKRLFSKTLS*ESESKSSRSGR
Trigger: CCGGCCCGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215957.10
ENST00000424008.2
ENST00000445494.6
ENST00000680375.1
ENST00000680501.1
ENST00000680578.1
ENST00000681920.1
CDS CAA 90 bp TCAGCCACTTCAAAGGCCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTCCTAAAGCACCGCTGAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SATSKAKRLFSKTLS*ESESKSPKAPLSWK
Trigger: CTTCCAGCTCAGCGGTGCTTTAGGAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGAAGTGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454685.6
CDS CAA 72 bp TGGCGAGACACCAGCAAACGGTTATTCTCGAAGACATaGTCCTTGGAAAGCGAATCAAAATCTAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: WRDTSKRLFSKT*SLESESKSSRS
Trigger: CGACCTGCTAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGCTGGTGTCTCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679832.1
CDS CAA 72 bp TCAAAGGCCAAACGGTTATTCTCGAAGACATTGTCCTaGGAAAGCGAATCAAAATCTCCTAAAGCACCGCTG +
Preference number: 6 (lower is better)
Translates to: SKAKRLFSKTLS*ESESKSPKAPL
Trigger: CAGCGGTGCTTTAGGAGATTTTGATTCGCTTTCCAAGGACAATGTCTTCGAGAATAACCGTTTGGCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454685.6