RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICAL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000243156

Ensembl transcript IDs: ENST00000252134.11, ENST00000383094.7, ENST00000400561.6, ENST00000414725.6, ENST00000424046.1, ENST00000441493.7, ENST00000461307.5, ENST00000462645.1, ENST00000465886.1, ENST00000495076.5, ENST00000498345.1, ENST00000498573.5, ENST00000577821.5, ENST00000578905.1, ENST00000578984.1, ENST00000579997.5, ENST00000580469.1, ENST00000584751.1, ENST00000585038.1, ENST00000672019.1

Found 2444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGGCAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTaGGCTTCCTCCGCAAGGTGGCGGGCTCCTCGCCCGGGGGTGGCG +
Preference number: 1 (lower is better)
Translates to: RARAAGPPRHWARPP*ASSARWRAPRPGVA
Trigger: CGCCACCCCCGGGCGAGGAGCCCGCCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTGCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp CAGCTGGCCCCAGCCCACGGAGGCGGCAGGCGGCTGGAGCGCCCCTaGCAGGCGGGTCTGGTCCGGATGGCTCCTCGCTGGGCTATGTGC +
Preference number: 1 (lower is better)
Translates to: QLAPAHGGGRRLERP*QAGLVRMAPRWAMC
Trigger: GCACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGGGGCGCTCCAGCCGCCTGCCGCCTCCGTGGGCTGGGGCCAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp ACTCAGCCTGCTCCACTGCGGGACGCCTTGGAGGGGCCAGGCCTCTaGTCCCAGCTGGCCCCAGCCCACGGAGGCGGCAGGCGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: TQPAPLRDALEGPGL*SQLAPAHGGGRRLE
Trigger: CTCCAGCCGCCTGCCGCCTCCGTGGGCTGGGGCCAGCTGGGAGCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTGGAGCAGGCTGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp AGGGCCGTGTGGCGGGTGGGCGCCCTGCAGCCCTGCGTGCTGACCTaGTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: RAVWRVGALQPCVLT*WRRPPRRPCPARCS
Trigger: TGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 90 bp CTCTTAGGGCCGTGTGGCGGGTGGGCGCCCTGCAGCCCTGCGTGCTaGCCTGCTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCT +
Preference number: 1 (lower is better)
Translates to: LLGPCGGWAPCSPAC*PAGDVLLGARVQHA
Trigger: AGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 90 bp GAGGAGGCTCTTAGGGCCGTGTGGCGGGTGGGCGCCCTGCAGCCCTaGGTGCTGACCTGCTGGCGACGTCCTCCTCGGCGCCCGTGTCCA +
Preference number: 1 (lower is better)
Translates to: EEALRAVWRVGALQP*VLTCWRRPPRRPCP
Trigger: TGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAGCCTCCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 90 bp GGAGCACCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATaGCGCTGTGGCTCCCGCACCCGGGCGCAGGTGATCAGTTCCTCT +
Preference number: 1 (lower is better)
Translates to: GAPGSPGPGRVGRTR*RCGSRTRAQVISSS
Trigger: AGAGGAACTGATCACCTGCGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGGTGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp AGAGGCCTGAAGGCATCATCTGGGCAGGCCTGGAAGCCCACGGGGTaGAGCATCCTCAAGCCCAGGGGCGGGAGCGCCTCCGGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: RGLKASSGQAWKPTG*SILKPRGGSASGLP
Trigger: GGGCAGGCCGGAGGCGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCCCAGATGATGCCTTCAGGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp GGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTCCAGGTGGGCCTCCTCCCAGGAGGT +
Preference number: 1 (lower is better)
Translates to: GARGVVPCVMPYTPC*SSEWEVQVGLLPGG
Trigger: ACCTCCTGGGAGGAGGCCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAGGTCCAGGTGGGCCTCCTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: QGARGVVPCVMPYTP*CSSEWEVQVGLLPG
Trigger: TCCTGGGAGGAGGCCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TGGCGCCGGAGCTGCAGCTCTGCCCTTACGACGGGAAGCACCCTGTaGTTTCCAGAGTCCACCGTGGCCCCGCTGGAGGGGGTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: WRRSCSSALTTGSTL*FPESTVAPLEGVLG
Trigger: CCCCAGCACCCCCTCCAGCGGGGCCACGGTGGACTCTGGAAAGCACAGGGTGCTTCCCGTCGTAAGGGCAGAGCTGCAGCTCCGGCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp GAGCAGAAGGCTGGGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTaGAAAGGCTCGGGTCCACCTTCCAGACTGCAGGCTGCCGTGTGT +
Preference number: 1 (lower is better)
Translates to: EQKAGAQACGSAAPL*KGSGPPSRLQAAVC
Trigger: ACACACGGCAGCCTGCAGTCTGGAAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCCCAGCCTTCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCCTCCGGCCTaGCCTCCAGGGAAGCTGCATGTGGACCTCCACGGTATTCAGCCT +
Preference number: 1 (lower is better)
Translates to: RGAASSSPGAGAPPA*PPGKLHVDLHGIQP
Trigger: AGGCTGAATACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGCAGGCCGGAGGCGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp TGCTGCATCCTGCTCAGCTGCCTGGCCATGGCGTCCCGCAGCGCCTaGCTCTTCACGGACTTCTCCCTGGCTCGCATGCGCTCCTCGGCC +
Preference number: 1 (lower is better)
Translates to: CCILLSCLAMASRSA*LFTDFSLARMRSSA
Trigger: GGCCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACGCCATGGCCAGGCAGCTGAGCAGGATGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp CCGAGTGGCCTTGGCCTCACCAGGGCGGGTGATGGGAGCAGTGTCTaGGCGCCTGCGAGCTCCTGTCTACCTACACAGGACCTGGGCCGC +
Preference number: 1 (lower is better)
Translates to: PSGLGLTRAGDGSSV*APASSCLPTQDLGR
Trigger: GCGGCCCAGGTCCTGTGTAGGTAGACAGGAGCTCGCAGGCGCTCAGACACTGCTCCCATCACCCGCCCTGGTGAGGCCAAGGCCACTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp TCCTCGGCGCCCGTGTCCAGCACGCTGCTCAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: SSAPVSSTLLRLCSA*VSSGTSCSASACLR
Trigger: CCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCGCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 90 bp GCGTGGGGAAGCTGGGCTCGGGCCCCTTGCTGCGGTCCACAGGTGTaGGCCCGAGGCTGCGGCGGATCTCCGCACTCTTCATCCAGAACT +
Preference number: 1 (lower is better)
Translates to: AWGSWARAPCCGPQV*ARGCGGSPHSSSRT
Trigger: AGTTCTGGATGAAGAGTGCGGAGATCCGCCGCAGCCTCGGGCTCACACCTGTGGACCGCAGCAAGGGGCCCGAGCCCAGCTTCCCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp AGCCAGCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: SQHILRERAGWSPAS*HTRRAAPLSGRSRW
Trigger: CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TCCTCACAGTCGGGAGCAGAAGGCTGGGGCGCAGGCCTGCGGCTCTaGGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCCAGACTGCA +
Preference number: 1 (lower is better)
Translates to: SSQSGAEGWGAGLRL*GASLQRLGSTFQTA
Trigger: TGCAGTCTGGAAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCCCAGCCTTCTGCTCCCGACTGTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CTGACCTGCTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCTGAGTCTCCTCCGGTACCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: LTCWRRPPRRPCPAR*SGCARPESPPVPPA
Trigger: TGCAGGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 90 bp CGTCCCGCAGCGCCTGGCTCTTCACGGACTTCTCCCTGGCTCGCATaGGCTCCTCGGCCAACTCCTTGGCTTCCGCGGACACCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: RPAAPGSSRTSPWLA*APRPTPWLPRTPRA
Trigger: TGCCCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp CTGGGGGACGGACTAGGCCTCCCTCAAGACGGCCCGGTGCACTGGTaGCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCT +
Preference number: 1 (lower is better)
Translates to: LGDGLGLPQDGPVHW*LNHPESLPVCPSFP
Trigger: AGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTCTTGAGGGAGGCCTAGTCCGTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 90 bp TGCCTGGGGGACGGACTAGGCCTCCCTCAAGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTC +
Preference number: 1 (lower is better)
Translates to: CLGDGLGLPQDGPVH*WLNHPESLPVCPSF
Trigger: GAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTCTTGAGGGAGGCCTAGTCCGTCCCCCAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 90 bp GCGGCAGGCGGCTGGAGCGCCCCTGGCAGGCGGGTCTGGTCCGGATaGCTCCTCGCTGGGCTATGTGCTGACTGCTTTGATGGACAAGCA +
Preference number: 1 (lower is better)
Translates to: AAGGWSAPGRRVWSG*LLAGLCADCFDGQA
Trigger: TGCTTGTCCATCAAAGCAGTCAGCACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGGGGCGCTCCAGCCGCCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp CGGCCTGAGGATGGCCGCCAGGGACAGAGGCCTGAAGGCATCATCTaGGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAG +
Preference number: 1 (lower is better)
Translates to: RPEDGRQGQRPEGII*AGLEAHGVQHPQAQ
Trigger: CTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCCCAGATGATGCCTTCAGGCCTCTGTCCCTGGCGGCCATCCTCAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp CAGGCAGCAGTGGCGTGTTCCTTGGCACAGCTAATCCTCTCCTGTTaGGCTCTCGTACCGCCGCCGGGAAGCCGGCTGGCTGTCCGCCCC +
Preference number: 1 (lower is better)
Translates to: QAAVACSLAQLILSC*ALVPPPGSRLAVRP
Trigger: GGGGCGGACAGCCAGCCGGCTTCCCGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCACTGCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp GCGAGCTCCTGTCTACCTACACAGGACCTGGGCCGCCCTCAGGTGTaGTGGTGCGGGACGGGGCTGAGGGACAGCACTTCACGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: ASSCLPTQDLGRPQV*WCGTGLRDSTSRLC
Trigger: GCAGAGCCGTGAAGTGCTGTCCCTCAGCCCCGTCCCGCACCATCACACCTGAGGGCGGCCCAGGTCCTGTGTAGGTAGACAGGAGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp GCCTCAGGGACAGGCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCAGGCCGTTCA +
Preference number: 1 (lower is better)
Translates to: ASGTGGSSPARSALG*PSVAWRCWAPPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGCCTGTCCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp AGACAGGAGACATGTGAGGCGGGTGCCCGGCTCTCCGTGGTGTCCTaGCAGCAGCAGCCCCCTGCGTTCCTAGTCTGCTCTTGGGGCCCT +
Preference number: 1 (lower is better)
Translates to: RQETCEAGARLSVVS*QQQPPAFLVCSWGP
Trigger: AGGGCCCCAAGAGCAGACTAGGAACGCAGGGGGCTGCTGCTGCCAGGACACCACGGAGAGCCGGGCACCCGCCTCACATGTCTCCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGG +
Preference number: 1 (lower is better)
Translates to: GSSPARSALGCPSVA*RCWAPPGRSRLNLG
Trigger: CCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp CAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTCCTTTGGCCTCCTTTCCAGACAGGG +
Preference number: 1 (lower is better)
Translates to: QWSWPRRWPVRLHLW*RHPAGVLWPPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp TCACGCCTGAACCTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCCTGCAGGGGTC +
Preference number: 1 (lower is better)
Translates to: SRLNLGFSQWSWPRR*PVRLHLWWRHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTTCAGGCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp TCTTCATGTTGGAGGAGCTCCCGTGCAGGCCCAGGCCAGAGCTGCTaGACAGCTCCCTGCGCTCCTCCTGGGCGCTGCGTAGCTCTCTGT +
Preference number: 1 (lower is better)
Translates to: SSCWRSSRAGPGQSC*TAPCAPPGRCVALC
Trigger: ACAGAGAGCTACGCAGCGCCCAGGAGGAGCGCAGGGAGCTGTCCAGCAGCTCTGGCCTGGGCCTGCACGGGAGCTCCTCCAACATGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp TCACGGACTTCTCCCTGGCTCGCATGCGCTCCTCGGCCAACTCCTTaGCTTCCGCGGACACCAAGGGCAGCCCCCTCTTCTGTGGCTGCA +
Preference number: 1 (lower is better)
Translates to: SRTSPWLACAPRPTP*LPRTPRAAPSSVAA
Trigger: TGCAGCCACAGAAGAGGGGGCTGCCCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp TGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: CQASSDRGSGWFGCH*LARRMPTENGALGG
Trigger: CCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CCCACCCACTCACCTCCTTACAGGCGTGCTGCCCGTACGCTGCTGTaGATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGTGTGAG +
Preference number: 1 (lower is better)
Translates to: PTHSPPYRRAARTLL*IPKALTWSTAPQCE
Trigger: CTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCAGCACGCCTGTAAGGAGGTGAGTGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp TGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATCCTGCAGGGGTCCTTTGGCCTCCTT +
Preference number: 1 (lower is better)
Translates to: WGSLSGAGHGVGPSV*ICGGAILQGSFGLL
Trigger: AAGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTaGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGC +
Preference number: 1 (lower is better)
Translates to: ASSQEVEPSQITTVT*GSPLHAGLDHFPSS
Trigger: GCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp GCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTaGCATTCGAGGAGAGGTCTGGGAAAGGCCACGCAGGCAGTGAAG +
Preference number: 1 (lower is better)
Translates to: ATRAEGGSAGAGPVL*HSRRGLGKATQAVK
Trigger: CTTCACTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp AGGCGTGCTGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTaGAGTACGGCTCCCCAGTGTGAGGCTCCCGTGGTTCTCAGAACC +
Preference number: 1 (lower is better)
Translates to: RRAARTLLCIPKALT*STAPQCEAPVVLRT
Trigger: GGTTCTGAGAACCACGGGAGCCTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCAGCACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp CTTACAGGCGTGCTGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTaGCCTGGAGTACGGCTCCCCAGTGTGAGGCTCCCGTGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: LTGVLPVRCCASPKP*PGVRLPSVRLPWFS
Trigger: TGAGAACCACGGGAGCCTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCAGCACGCCTGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp AGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATaGCACTGCCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTTG +
Preference number: 1 (lower is better)
Translates to: RRCQASSDRGSGWFG*HCLARRMPTENGAL
Trigger: CAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp GGGGCTCGCCCTTTATGTCCCCATGAAGATCCGGCACAAGGCAGGTaGCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTT +
Preference number: 1 (lower is better)
Translates to: GARPLCPHEDPAQGR*PSPSEGRAGVADLL
Trigger: AAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCTTCATGGGGACATAAAGGGCGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TGCCGCTGGATGATCTGGGCTCGATGCAGCCGCTTAAGCTCCTCCTaGTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGTCAGC +
Preference number: 1 (lower is better)
Translates to: CRWMIWARCSRLSSS*LACLRAAFCTRRVS
Trigger: GCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCATCCAGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAAATGGAGC +
Preference number: 1 (lower is better)
Translates to: SKEVPGLLRSRLRVV*MPLPGQADANRKWS
Trigger: GCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp ATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGGCTTGGCTaGGTTCTCATGGCTCCCAGGGCACACCGCCTAGCCTCTGGGCGC +
Preference number: 1 (lower is better)
Translates to: IRARAVAEAAFTWLG*VLMAPRAHRLASGR
Trigger: GCGCCCAGAGGCTAGGCGGTGTGCCCTGGGAGCCATGAGAACCCAGCCAAGCCAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp TCTCAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGGGTCCTTTGGCCTCCTTTCCAGACA +
Preference number: 1 (lower is better)
Translates to: SQWSWPRRWPVRLHL*WRHPAGVLWPPFQT
Trigger: TGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp ACAGGGACTTGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAGCTaGGCTTCTCCGGGGGCCGGCCCTCGCCTTTGGACTTCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: TGTWVWRRLLLGGWS*ASPGAGPRLWTSSP
Trigger: AGGAGAAGAAGTCCAAAGGCGAGGGCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp ACTTCCACAGGGACTTGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTaGAGCTGGGCTTCTCCGGGGGCCGGCCCTCGCCTTTGGACTTCT +
Preference number: 1 (lower is better)
Translates to: TSTGTWVWRRLLLGG*SWASPGAGPRLWTS
Trigger: AGAAGTCCAAAGGCGAGGGCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp AGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTaGCCAGGCGGATGCCAACAGAAAATGGAGCGTTGGGTGGGAGCT +
Preference number: 1 (lower is better)
Translates to: RPPQIAAPGGLDATA*PGGCQQKMERWVGA
Trigger: AGCTCCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp TCAACACAGCTCCAGGCCGTCAGAGGAGCTTGGAAGCAAACTGCATaGAGGCCGAGTGGCCTTGGCCTCACCAGGGCGGGTGATGGGAGC +
Preference number: 1 (lower is better)
Translates to: STQLQAVRGAWKQTA*RPSGLGLTRAGDGS
Trigger: GCTCCCATCACCCGCCCTGGTGAGGCCAAGGCCACTCGGCCTTCATGCAGTTTGCTTCCAAGCTCCTCTGACGGCCTGGAGCTGTGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp TCAGAGGCCGGCGCCATCCTCTCTTCCTCCTCTCTCTCACGGATATaGGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCG +
Preference number: 1 (lower is better)
Translates to: SEAGAILSSSSLSRI*VQCTSAWISRGSAA
Trigger: CGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAGAGAGAGGAGGAAGAGAGGATGGCGCCGGCCTCTGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp TCTCCGCACTCTTCATCCAGAACTCCTCCACCAGGTCGCTCCGTCTaGGGGCCTCATCCACAGCAAGGGGGCTGCCCAGTCTGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: SPHSSSRTPPPGRSV*GPHPQQGGCPVCPW
Trigger: CCAAGGACAGACTGGGCAGCCCCCTTGCTGTGGATGAGGCCCTCAGACGGAGCGACCTGGTGGAGGAGTTCTGGATGAAGAGTGCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp GTGACGACCTCTTCTTGCTCTTCCCACTGGAGCCCTCGGATGAAGTaGAAGAGCCATCTGGGCCCCCTGAGTCCGACGGCGGGGAGAGGA +
Preference number: 1 (lower is better)
Translates to: VTTSSCSSHWSPRMK*KSHLGPLSPTAGRG
Trigger: TCCTCTCCCCGCCGTCGGACTCAGGGGGCCCAGATGGCTCTTTCACTTCATCCGAGGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp GGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCCAGACTGCAGGCTaGCGTGTGTGCTGTGGAGGATGCCACAGTGTTAAGGCTGACCAG +
Preference number: 1 (lower is better)
Translates to: GASLQRLGSTFQTAG*RVCCGGCHSVKADQ
Trigger: CTGGTCAGCCTTAACACTGTGGCATCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGACCCGAGCCTTTGCAGAGAGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGTCGACTCTaGCGGTCTTCCAGCTCCAGCTCCCGGGCAAAGATCATCAGCTCC +
Preference number: 1 (lower is better)
Translates to: SSTAMRSRSSCCSRL*RSSSSSSRAKIISS
Trigger: GGAGCTGATGATCTTTGCCCGGGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp TCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTaGGCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTC +
Preference number: 1 (lower is better)
Translates to: SCHTRRAAPLSGRSR*ASSQEVEPSQITTV
Trigger: GACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGCCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp AGGCCACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTaGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGG +
Preference number: 1 (lower is better)
Translates to: RPHSFQATLQTVSLL*GQQELQGPKAALPG
Trigger: CCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp CCCTGTGCTTTCCAGAGTCCACCGTGGCCCCGCTGGAGGGGGTGCTaGGGCAGGACTTGTCGTCGGCCTTCTTCTTCTTGTCCTTCTTGT +
Preference number: 1 (lower is better)
Translates to: PCAFQSPPWPRWRGC*GRTCRRPSSSCPSC
Trigger: ACAAGAAGGACAAGAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCACCCCCTCCAGCGGGGCCACGGTGGACTCTGGAAAGCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp GCTCTCGCCGGGACTTCTGTGAGGACTTCTCAAGGACATCGTCGCTaGAGAGGTCTGAGTCCTCGGAGAAGCTCAGCTGGCGCCGGAGCT +
Preference number: 1 (lower is better)
Translates to: ALAGTSVRTSQGHRR*RGLSPRRSSAGAGA
Trigger: AGCTCCGGCGCCAGCTGAGCTTCTCCGAGGACTCAGACCTCTCCAGCGACGATGTCCTTGAGAAGTCCTCACAGAAGTCCCGGCGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 90 bp GCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGTCAGCTTaGCATTCAGTTCCTCCTCCGTGTAGGTTCTTGGCTCTCGCCGGG +
Preference number: 1 (lower is better)
Translates to: AWPVSELPFAHAGSA*HSVPPPCRFLALAG
Trigger: CCCGGCGAGAGCCAAGAACCTACACGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp GGGTCCACCTTCCAGACTGCAGGCTGCCGTGTGTGCTGTGGAGGATaGCACAGTGTTAAGGCTGACCAGGACCAGAAGGTGACACTGGGC +
Preference number: 1 (lower is better)
Translates to: GSTFQTAGCRVCCGG*HSVKADQDQKVTLG
Trigger: GCCCAGTGTCACCTTCTGGTCCTGGTCAGCCTTAACACTGTGGCATCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp GCCCTGATTCTGAGCTGCCGGACTAAGATGTTCTGGACTCTGAGCTaGCGGAGGGTAAGCCCCTCAGCCCTGAGCTCACTGGCCTTTGCC +
Preference number: 1 (lower is better)
Translates to: ALILSCRTKMFWTLS*RRVSPSALSSLAFA
Trigger: GGCAAAGGCCAGTGAGCTCAGGGCTGAGGGGCTTACCCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCGGCAGCTCAGAATCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GGGAGGCAAGGTGCCCTGATTCTGAGCTGCCGGACTAAGATGTTCTaGACTCTGAGCTGCCGGAGGGTAAGCCCCTCAGCCCTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: GRQGALILSCRTKMF*TLSCRRVSPSALSS
Trigger: TGAGCTCAGGGCTGAGGGGCTTACCCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCGGCAGCTCAGAATCAGGGCACCTTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp CCTTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTTGGGTTTaGCGGCGGCTTCTTCTAGGAGGTTGGAGCTGGGCTTCTCCGGGG +
Preference number: 1 (lower is better)
Translates to: PSCTRRRRTSTGTWV*RRLLLGGWSWASPG
Trigger: CCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp CTGCAAAGGCTCGGGTCCACCTTCCAGACTGCAGGCTGCCGTGTGTaGTGTGGAGGATGCCACAGTGTTAAGGCTGACCAGGACCAGAAG +
Preference number: 1 (lower is better)
Translates to: LQRLGSTFQTAGCRV*CGGCHSVKADQDQK
Trigger: CTTCTGGTCCTGGTCAGCCTTAACACTGTGGCATCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGACCCGAGCCTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp GAGCTGCCGGAGGGTAAGCCCCTCAGCCCTGAGCTCACTGGCCTTTaGCACCCAAGCTGGGGGACAGTGCCTGTCATTAACTGTAAAGGT +
Preference number: 1 (lower is better)
Translates to: ELPEGKPLSPELTGL*HPSWGTVPVINCKG
Trigger: ACCTTTACAGTTAATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTCAGGGCTGAGGGGCTTACCCTCCGGCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp CAGCAGAGTGAGCTCACCGGGAGGCAAGGTGCCCTGATTCTGAGCTaGCGGACTAAGATGTTCTGGACTCTGAGCTGCCGGAGGGTAAGC +
Preference number: 1 (lower is better)
Translates to: QQSELTGRQGALILS*RTKMFWTLSCRRVS
Trigger: GCTTACCCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCGGCAGCTCAGAATCAGGGCACCTTGCCTCCCGGTGAGCTCACTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGGCAGGCACCGGGTGGAGGAGGGGAC +
Preference number: 1 (lower is better)
Translates to: PKQNGNAPSSHEWSR*SSARVRQAPGGGGD
Trigger: GTCCCCTCCTCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp TGGCCTGGCCCAAAACAGAACGGAAATGCACCCTCATCACATGAGTaGTCCAGATGGTCTAGCGCCAGGGTGAGGCAGGCACCGGGTGGA +
Preference number: 1 (lower is better)
Translates to: WPGPKQNGNAPSSHE*SRWSSARVRQAPGG
Trigger: TCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGGGCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp GATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGGCTTaGCTGGGTTCTCATGGCTCCCAGGGCACACCGCCTAGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: DNKGTCSSRSCVHLA*LGSHGSQGTPPSLW
Trigger: CCAGAGGCTAGGCGGTGTGCCCTGGGAGCCATGAGAACCCAGCCAAGCCAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTTaGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGC +
Preference number: 1 (lower is better)
Translates to: DATAWPGGCQQKMER*VGAQDQLRLKPLDS
Trigger: GCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp TGTGACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTaGCCCTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCA +
Preference number: 1 (lower is better)
Translates to: CDRQKHSPAGPLLPQ*PWAVNHLELYVGHS
Trigger: TGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp GCTCCGACTCGTAGCGCACCATGGCGTTCTTCTCCTGCACTAGCTTaGACCACTCCTGCATCAGCTTGGGGTCGTCCTTCTTGCCCATGC +
Preference number: 1 (lower is better)
Translates to: APTRSAPWRSSPALA*TTPASAWGRPSCPC
Trigger: GCATGGGCAAGAAGGACGACCCCAAGCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGAAGAACGCCATGGTGCGCTACGAGTCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 90 bp TCGCTGATCTGCTTGAGAGGCACCAGCCTGCATCCCAGCATCCACTaGAGCACTCGCGTTTCCGTCTGGGTGAATCTTAGGCTGGGAGGA +
Preference number: 1 (lower is better)
Translates to: SLICLRGTSLHPSIH*STRVSVWVNLRLGG
Trigger: TCCTCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGTGCTGCAGTGGATGCTGGGATGCAGGCTGGTGCCTCTCAAGCAGATCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TGTTCTGGTTCCCAACGGCAACGTCCATCCTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTT +
Preference number: 1 (lower is better)
Translates to: CSGSQRQRPSSCLSE*SPGSVFLLCGPEEL
Trigger: AAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACTCTGACAGACAGGAGGATGGACGTTGCCGTTGGGAACCAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGCTCTGCTGTTGGCCTGGCCCAAAAC +
Preference number: 1 (lower is better)
Translates to: PKLRQGRVLQSRNSH*EGESGSSAVGLAQN
Trigger: GTTTTGGGCCAGGCCAACAGCAGAGCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp TCAGCGCTGTGGCGGCCACTAGCGGCGTTATCTCCCGGATGTGCATaGGAGAGAGATGGCAGCTTCTGGACAGACAAGGATGACACAGGT +
Preference number: 1 (lower is better)
Translates to: SALWRPLAALSPGCA*ERDGSFWTDKDDTG
Trigger: ACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGATAACGCCGCTAGTGGCCGCCACAGCGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp AGGAGACCTTTGCCTCACGTGAGAACAGGTGGAGAATCAGCGCTGTaGCGGCCACTAGCGGCGTTATCTCCCGGATGTGCATGGGAGAGA +
Preference number: 1 (lower is better)
Translates to: RRPLPHVRTGGESAL*RPLAALSPGCAWER
Trigger: TCTCTCCCATGCACATCCGGGAGATAACGCCGCTAGTGGCCGCCACAGCGCTGATTCTCCACCTGTTCTCACGTGAGGCAAAGGTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp GCTGTGGAGGATGCCACAGTGTTAAGGCTGACCAGGACCAGAAGGTaGCACTGGGCTCTCCTGCTACGTCTGGCCACTTACAGCAGATCC +
Preference number: 1 (lower is better)
Translates to: AVEDATVLRLTRTRR*HWALLLRLATYSRS
Trigger: GGATCTGCTGTAAGTGGCCAGACGTAGCAGGAGAGCCCAGTGTCACCTTCTGGTCCTGGTCAGCCTTAACACTGTGGCATCCTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp AAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTGGACCTCATaGCAAGCCCAGTGGCCAAGGGGTCAGGACAGGGCATGTCCCATC +
Preference number: 1 (lower is better)
Translates to: KEVVMKVGQVRAWTS*QAQWPRGQDRACPI
Trigger: GATGGGACATGCCCTGTCCTGACCCCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCCACTTTCATGACCACTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp AGGGCACACCGCCTAGCCTCTGGGCGCATCTTCCCTCTCCCAGAATaGGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAA +
Preference number: 1 (lower is better)
Translates to: RAHRLASGRIFPLPE*APQGLHEPAVREGK
Trigger: TTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTCATTCTGGGAGAGGGAAGATGCGCCCAGAGGCTAGGCGGTGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp GCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGTGTaGGGCTCCCGTGGTTCTCAGAACCAGGAACAAGCAGCTTTAGAA +
Preference number: 1 (lower is better)
Translates to: AVHPQSPDLEYGSPV*GSRGSQNQEQAALE
Trigger: TTCTAAAGCTGCTTGTTCCTGGTTCTGAGAACCACGGGAGCCTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp AGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACACAGAGGTGAGGAGGCTCTTAGGGCC +
Preference number: 1 (lower is better)
Translates to: RMDCGQQERQEASLH*EETETHRGEEALRA
Trigger: GGCCCTAAGAGCCTCCTCACCTCTGTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 90 bp GTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTG +
Preference number: 1 (lower is better)
Translates to: VVFGWRADPSCVLLI*IIIQEPARTSMSPV
Trigger: CACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CTTAGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTaGGTCCTCCTAATTTGCATAATAATTCAGGAGCCTGCCCGCACC +
Preference number: 1 (lower is better)
Translates to: LRVQCVVFGWRADPS*VLLICIIIQEPART
Trigger: GGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp GTCCTAGCTTCTGGCAGGGTCACTGGCTGTGATCGGATGGGAGAGTaGACAGCTTTCAGATCCGAGGGGGCATCAGCTTTGGGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: VLASGRVTGCDRMGE*TAFRSEGASALGFS
Trigger: AGAGAAGCCCAAAGCTGATGCCCCCTCGGATCTGAAAGCTGTGCACTCTCCCATCCGATCACAGCCAGTGACCCTGCCAGAAGCTAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp GCCTGCATCCCAGCATCCACTGCAGCACTCGCGTTTCCGTCTGGGTaGATCTTAGGCTGGGAGGAGGGAATTCTCACCAGCCACATGATT +
Preference number: 1 (lower is better)
Translates to: ACIPASTAALAFPSG*ILGWEEGILTSHMI
Trigger: AATCATGTGGCTGGTGAGAATTCCCTCCTCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGTGCTGCAGTGGATGCTGGGATGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp ACTGCCCATAATCCTGTTCCTTTTCTACCAAGGCTAGCAGCAGAGTaGGCTCACCGGGAGGCAAGGTGCCCTGATTCTGAGCTGCCGGAC +
Preference number: 1 (lower is better)
Translates to: TAHNPVPFLPRLAAE*AHREARCPDSELPD
Trigger: GTCCGGCAGCTCAGAATCAGGGCACCTTGCCTCCCGGTGAGCTCACTCTGCTGCTAGCCTTGGTAGAAAAGGAACAGGATTATGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp GCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACTTTaGAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGC +
Preference number: 1 (lower is better)
Translates to: ATYSRSLGHTPSKPL*KLFPCCGASRSYKG
Trigger: GCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp GGTAAGCCCCTCAGCCCTGAGCTCACTGGCCTTTGCCACCCAAGCTaGGGGACAGTGCCTGTCATTAACTGTAAAGGTCCACACTGTGAT +
Preference number: 1 (lower is better)
Translates to: GKPLSPELTGLCHPS*GTVPVINCKGPHCD
Trigger: ATCACAGTGTGGACCTTTACAGTTAATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTCAGGGCTGAGGGGCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp TCTTGTCCTTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTTaGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAGCTGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SCPSCTRRRRTSTGT*VWRRLLLGGWSWAS
Trigger: AGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp CTTTACCAGCCCTGCCTCCTGGGACGTGGGTCTAGGGAGGATGGCTaGGTTACACACAAGAGAATCAAGTGCCGTCATCATCGCCTCTAC +
Preference number: 1 (lower is better)
Translates to: LYQPCLLGRGSREDG*VTHKRIKCRHHRLY
Trigger: GTAGAGGCGATGATGACGGCACTTGATTCTCTTGTGTGTAACTCAGCCATCCTCCCTAGACCCACGTCCCAGGAGGCAGGGCTGGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp AGACCCCTCCTGCGTCCTCCTAATTTGCATAATAATTCAGGAGCCTaGCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACT +
Preference number: 1 (lower is better)
Translates to: RPLLRPPNLHNNSGA*PHLHVSCDAGVGMT
Trigger: AGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CCCCTGCATAGCCATCTGTCTGCCTCTGGCACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACTCATTGCGAGTCAATTTGGGGGTGG +
Preference number: 1 (lower is better)
Translates to: PLHSHLSASGTNPAV*LNELQTHCESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTGCCAGAGGCAGACAGATGGCTATGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 90 bp GGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATAGCAGTAGTGTGGCTTACAGTAGAA +
Preference number: 1 (lower is better)
Translates to: GLLSRQGSHCRSLPL*VARESIAVVWLTVE
Trigger: TTCTACTGTAAGCCACACTACTGCTATCGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp GGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGCGTCCTCCTAATTTGCATAATAATT +
Preference number: 1 (lower is better)
Translates to: GPGIWPLRVQCVVFG*RADPSCVLLICIII
Trigger: AATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp GCGGCGTTATCTCCCGGATGTGCATGGGAGAGAGATGGCAGCTTCTaGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: AALSPGCAWERDGSF*TDKDDTGSLLLCSW
Trigger: CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGATAACGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp CTGGGTCAAACACTGCCCAGTCATAGCTTTACCAGCCCTGCCTCCTaGGACGTGGGTCTAGGGAGGATGGCTGAGTTACACACAAGAGAA +
Preference number: 1 (lower is better)
Translates to: LGQTLPSHSFTSPAS*DVGLGRMAELHTRE
Trigger: TTCTCTTGTGTGTAACTCAGCCATCCTCCCTAGACCCACGTCCCAGGAGGCAGGGCTGGTAAAGCTATGACTGGGCAGTGTTTGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GCACAGCTTTCAGATCCGAGGGGGCATCAGCTTTGGGCTTCTCTTTaGGGAGCAAAGGCTCAGGGAAAAGGCGCTCCTCAGGTGATTTCT +
Preference number: 1 (lower is better)
Translates to: AQLSDPRGHQLWASL*GAKAQGKGAPQVIS
Trigger: AGAAATCACCTGAGGAGCGCCTTTTCCCTGAGCCTTTGCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCTCGGATCTGAAAGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 90 bp GGTGCAGGGCAGACAGGAGAGCAGCCACAGCTCATCCACACACAGTaGCAGGGAACAGGACGCAGAATCTTAAGTGAAGGTGAACCCAAA +
Preference number: 1 (lower is better)
Translates to: GAGQTGEQPQLIHTQ*QGTGRRILSEGEPK
Trigger: TTTGGGTTCACCTTCACTTAAGATTCTGCGTCCTGTTCCCTGTCACTGTGTGTGGATGAGCTGTGGCTGCTCTCCTGTCTGCCCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp TCAGCCCTGAGCTCACTGGCCTTTGCCACCCAAGCTGGGGGACAGTaGCTGTCATTAACTGTAAAGGTCCACACTGTGATTCCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: SALSSLAFATQAGGQ*LSLTVKVHTVIPLG
Trigger: TCCCAAAGGAATCACAGTGTGGACCTTTACAGTTAATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTCAGGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp AGCCACATGATTCCAGGGTCCCACCTTGCACCCTCTTGGCCTGTGTaGATGAGGGCCCATCCTGAAACCTTCTTTAACATATGTGCGGAG +
Preference number: 1 (lower is better)
Translates to: SHMIPGSHLAPSWPV*MRAHPETFFNICAE
Trigger: CTCCGCACATATGTTAAAGAAGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGAATCATGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp TCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTaGGAACGCTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACC +
Preference number: 1 (lower is better)
Translates to: SPRENLPGAAHILTA*ERLTQEVTRVLKST
Trigger: GGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp CAAGCCACTTTTCCAGGACATGGTGAGATCTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCTCTGGCACCAACCCAGCAGTTTGCT +
Preference number: 1 (lower is better)
Translates to: QATFPGHGEICHVYP*IAICLPLAPTQQFA
Trigger: AGCAAACTGCTGGGTTGGTGCCAGAGGCAGACAGATGGCTATGCAGGGGTAAACGTGACAGATCTCACCATGTCCTGGAAAAGTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp GGGAAAGGCCTGCATTTCCTAAAGGCCCATTCAGGATCCGAACTATaGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGACAGGGGT +
Preference number: 1 (lower is better)
Translates to: GKGLHFLKAHSGSEL*NLMVIGQGMSGDRG
Trigger: ACCCCTGTCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAATGGGCCTTTAGGAAATGCAGGCCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp AGGGTTATAGCATGCACATCCCCAAAGGTGTCACCCAGCTGGATGTaGTTACAGCTCTGGAACTGCCTAAGCATGCATCCACTGGTGCTG +
Preference number: 1 (lower is better)
Translates to: RVIACTSPKVSPSWM*LQLWNCLSMHPLVL
Trigger: CAGCACCAGTGGATGCATGCTTAGGCAGTTCCAGAGCTGTAATCACATCCAGCTGGGTGACACCTTTGGGGATGTGCATGCTATAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 90 bp ATTCTCACCAGCCACATGATTCCAGGGTCCCACCTTGCACCCTCTTaGCCTGTGTGGATGAGGGCCCATCCTGAAACCTTCTTTAACATA +
Preference number: 1 (lower is better)
Translates to: ILTSHMIPGSHLAPS*PVWMRAHPETFFNI
Trigger: TATGTTAAAGAAGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGAATCATGTGGCTGGTGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp GACACAGGTTCTTTGCTCCTTTGCAGCTGGGATGAATGTTCAAGTTaGAGCACAGTGTGGTTCCCATGGAAAGCCCAAGGTCAGCACAGC +
Preference number: 1 (lower is better)
Translates to: DTGSLLLCSWDECSS*STVWFPWKAQGQHS
Trigger: GCTGTGCTGACCTTGGGCTTTCCATGGGAACCACACTGTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 90 bp AAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCTTaGCGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGT +
Preference number: 1 (lower is better)
Translates to: KTCLELRTFSQLENA*RRKSPEYSSQPQTS
Trigger: ACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp AGCTGTATGTGGGACATTCAGAACACCCAGCAGTTTGTGGAGCTCTaGACGCATCTCACAGGCAAGTTTTACAAGTTGCTGAGAGAGGCC +
Preference number: 1 (lower is better)
Translates to: SCMWDIQNTQQFVEL*THLTGKFYKLLREA
Trigger: GGCCTCTCTCAGCAACTTGTAAAACTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTGCTGGGTGTTCTGAATGTCCCACATACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp ACCCTAGGGTTGAATGAAATTCTACTGCCTGGCTACCCTTCTAGCTaGTGTGGGAAAGGCCTGCATTTCCTAAAGGCCCATTCAGGATCC +
Preference number: 1 (lower is better)
Translates to: TLGLNEILLPGYPSS*CGKGLHFLKAHSGS
Trigger: GGATCCTGAATGGGCCTTTAGGAAATGCAGGCCTTTCCCACACCAGCTAGAAGGGTAGCCAGGCAGTAGAATTTCATTCAACCCTAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp CAAGGTCAAGCCAGTAGCTCTGCTCAAGGGTTTATAAATGTGTTTTaGCACACAGCATCTCTCACCCTCACTGCAGGGTCAGTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: QGQASSSAQGFINVF*HTASLTLTAGSVER
Trigger: TCTCTCCACTGACCCTGCAGTGAGGGTGAGAGATGCTGTGTGTCAAAACACATTTATAAACCCTTGAGCAGAGCTACTGGCTTGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR GCA 90 bp ATGCTGACTGATTTCATGTTTTCTGTGCTGCCCTCCTGTCATACCTaGCATAAATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTAC +
Preference number: 1 (lower is better)
Translates to: MLTDFMFSVLPSCHT*HKCQGLAFLECPCY
Trigger: GTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCATTTATGGCAGGTATGACAGGAGGGCAGCACAGAAAACATGAAATCAGTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR GCA 90 bp AGAGAGATGGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTaGTCCTTTGCAGCTGGGATGAATGTTCAAGTTGAAGCACAGTGT +
Preference number: 1 (lower is better)
Translates to: REMAASGQTRMTQVL*SFAAGMNVQVEAQC
Trigger: ACACTGTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 90 bp TCCCGCACCTGGTGTTTTATGCGTGTGATATATGTGTATCCATCCTaGTTCCCTGCCTTCAAGGGAAGACTTAACTCTCCGAGAGAAAAC +
Preference number: 1 (lower is better)
Translates to: SRTWCFMRVIYVYPS*FPAFKGRLNSPREN
Trigger: GTTTTCTCTCGGAGAGTTAAGTCTTCCCTTGAAGGCAGGGAAGCAGGATGGATACACATATATCACACGCATAAAACACCAGGTGCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 90 bp GAAGGGAAAGGATGCAACTCTGGGAACCTCTCGTTGAAGGCCAAATaGGTAATTCTCTTGTCCCACCATGGAAATTCTATGACCAACTCC +
Preference number: 1 (lower is better)
Translates to: EGKGCNSGNLSLKAK*VILLSHHGNSMTNS
Trigger: GGAGTTGGTCATAGAATTTCCATGGTGGGACAAGAGAATTACCCATTTGGCCTTCAACGAGAGGTTCCCAGAGTTGCATCCTTTCCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 90 bp AATTTGGGGGTGGTTCGGGAATTCACCAGGCTCTCCATTTCCAGGTaGATATCTTTTGTTTCGCCAGTATCATATAAATGGCGCACCTGG +
Preference number: 1 (lower is better)
Translates to: NLGVVREFTRLSISR*ISFVSPVSYKWRTW
Trigger: CCAGGTGCGCCATTTATATGATACTGGCGAAACAAAAGATATTCACCTGGAAATGGAGAGCCTGGTGAATTCCCGAACCACCCCCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 90 bp ATAAACATTCACACATCACCGTCAGCTATGGCTCTTGGGGTAAGGTaGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCCACTAAAAAG +
Preference number: 1 (lower is better)
Translates to: INIHTSPSAMALGVR*EVSWIVEFSCSTKK
Trigger: CTTTTTAGTGGAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATAGCTGACGGTGATGTGTGAATGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GTACCTATATATAAACATTCACACATCACCGTCAGCTATGGCTCTTaGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTC +
Preference number: 1 (lower is better)
Translates to: VPIYKHSHITVSYGS*GKVGGKLDCRILLL
Trigger: GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATAGCTGACGGTGATGTGTGAATGTTTATATATAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp CTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCCCCACTaGCTCTCACAATTTATAAATTACAGTGGAGAAAATGGTGCTGAC +
Preference number: 1 (lower is better)
Translates to: LPGMSLLHYMNLLPH*LSQFINYSGENGAD
Trigger: GTCAGCACCATTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 90 bp CCTAAAAACCTGAAACCCATTATACTTTCAATTAGATGGCAAGAATaGCAACCTCGACCAGATGGGAAAGTCAGCAAACCTGGCGTCATT +
Preference number: 1 (lower is better)
Translates to: PKNLKPIILSIRWQE*QPRPDGKVSKPGVI
Trigger: AATGACGCCAGGTTTGCTGACTTTCCCATCTGGTCGAGGTTGCCATTCTTGCCATCTAATTGAAAGTATAATGGGTTTCAGGTTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp TTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTTaGTCATCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAA +
Preference number: 1 (lower is better)
Translates to: FCSFPAMPSASLLHF*SSTVSDKKRIPLDK
Trigger: TTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGATGACCAAAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 90 bp AAAATCTACATAATTCTTCCCAACAGGCCTGGTACCCACAAACCCTaGGAGTCCTGTCATGCTATGACAAGAATAAATGTGTTTGTAGAG +
Preference number: 1 (lower is better)
Translates to: KIYIILPNRPGTHKP*ESCHAMTRINVFVE
Trigger: CTCTACAAACACATTTATTCTTGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAGAATTATGTAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp GATTTGGTTACCAGAGAAAGACAATACTTTAAAGCCGACCTAGAGTaGTTCTTTGAACTGCAGGTTGTAATTGGGTGTGGGTGTGTTTTT +
Preference number: 1 (lower is better)
Translates to: DLVTRERQYFKADLE*FFELQVVIGCGCVF
Trigger: AAAAACACACCCACACCCAATTACAACCTGCAGTTCAAAGAACCACTCTAGGTCGGCTTTAAAGTATTGTCTTTCTCTGGTAACCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 90 bp TTTAGAACTCCTAAAAACCTGAAACCCATTATACTTTCAATTAGATaGCAAGAATGGCAACCTCGACCAGATGGGAAAGTCAGCAAACCT +
Preference number: 1 (lower is better)
Translates to: FRTPKNLKPIILSIR*QEWQPRPDGKVSKP
Trigger: AGGTTTGCTGACTTTCCCATCTGGTCGAGGTTGCCATTCTTGCCATCTAATTGAAAGTATAATGGGTTTCAGGTTTTTAGGAGTTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp GGCCGCATCCAGGTGGCGGGCAAGGGCGGCGGGACCACCGAGGCATaGGGCTCGGCCTCCCTGAGCTTCCTCCGCAAGGTGGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRIQVAGKGGGTTEA*GSASLSFLRKVAGS
Trigger: GGAGCCCGCCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTGCCCGCCACCTGGATGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGCTGCGGGCTCCCTGGTaGGACAGGAGTCCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: LLGQGRVARLLGARPAGRLRAPW*DRSPSF
Trigger: GAAGCTAGGACTCCTGTCTCACCAGGGAGCCCGCAG...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCGGTCTAGCGCCAGGGTaGGGCAGGCACCGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPGLAPG*GRHRVE
Trigger: CTCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACC...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCA +
Preference number: 2 (lower is better)
Translates to: LLGQGRVARLLGARPAGRWFGCH*LARRMP
Trigger: TGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCCAGGCCGGCGCTCCTTaGCCTGGGAGGGTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPQAGAP*PGRVLR
Trigger: CCTCAGCACCCTCCCAGGGCAAGGAGCGCCGGCCTG...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGAGCTGGCGCCGGAGCTaGAGCTCTGCCCTTACGACG +
Preference number: 2 (lower is better)
Translates to: GRPGSPRGAASSSPGAGASWRRS*SSALTT
Trigger: CGTCGTAAGGGCAGAGCTGCAGCTCCGGCGCCAGCT...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLGQGRVARLLGARPAGRMPYTP*CSSEWE
Trigger: CTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCAT...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGGTGGAACAGGGACAATaGCTGTCTGCCAACTGGGGG +
Preference number: 2 (lower is better)
Translates to: LLGQGRVARLLGARPAGRVEQGQ*LSANWG
Trigger: CCCCCAGTTGGCAGACAGGCATTGTCCCTGTTCCAC...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGGACCTCTCTCTTGGTaGTTCGGTGAGGCGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAGPLSW*FGEAGS
Trigger: GCTGCCCGCCTCACCGAAGCACCAAGAGAGAGGTCC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCCTGGGGAGACCGGATaGGGCTGGTGGCTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPPGETG*GWWLGR
Trigger: CCTCCCAAGCCACCAGCCCCATCCGGTCTCCCCAGG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCTCGCCTTCCGGCTTTaGCAGGCCCAGCCTTTTGGG +
Preference number: 2 (lower is better)
Translates to: GRPGSPRGAASSSPGAGALAFRL*QAQPFG
Trigger: CCCAAAAGGCTGGGCCTGCCAAAGCCGGAAGGCGAG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSWSPAS*HTRRAA
Trigger: AGCAGCACGGCGTGTATGGCATGACGCAGGGGACCA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTCGCTGGTGGCTTCATaGTTCAGGGTGGGCTCCTCG +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSSLVAS*FRVGSS
Trigger: CGAGGAGCCCACCCTGAAGCATGAAGCCACCAGCGA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTTGGATGCCACTGCCTaGCCAGGCGGATGCCAACAG +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSLDATA*PGGCQQ
Trigger: CTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGTTGGATGCCACTGCCTaGCCAGGCGGATGCCAACAG +
Preference number: 2 (lower is better)
Translates to: GRPGSPRGAASSSPGAGALDATA*PGGCQQ
Trigger: CTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAA...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGCTTCCTCCGCAAGGTaGCGGGCTCCTCGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWASSAR*RAPRPG
Trigger: CCCCGGGCGAGGAGCCCGCCACCTTGCGGAGGAAGC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGGACCTCCTCGCTGGTaGCTTCATGCTTCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAGPPRW*LHASGW
Trigger: CCACCCTGAAGCATGAAGCCACCAGCGAGGAGGTCC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAACTCTCCAAGGCCACTTaGGGCCTCTGCCCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQLSKAT*GLCPSG
Trigger: ACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAG...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGGCGCACTGTGGTTCTaGCGGGGAGCAGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGGALWF*RGAASL
Trigger: GAGGGAAGCTGCTCCCCGTCAGAACCACAGTGCGCC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAGCCCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 2 (lower is better)
Translates to: RQRLPPACTEERSVRQPKSPVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGAGGCCAGCTCCATCTaGTGCATCCTGCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GRRPAALRRLSAKARVHLEASSI*CILLSC
Trigger: GCAGCTGAGCAGGATGCAGCAGATGGAGCTGGCCTC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPCVVFG*RADPSC
Trigger: GCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACA...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCGGACTGGGTAGGGGATaGGACAGTGGCCTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPGLGRG*DSGLGG
Trigger: TCCACCGAGGCCACTGTCCCATCCCCTACCCAGTCC...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp ACAGGCAGCAGTGGCGTGTTCCTTGGCACAGCTAATCCTCTCCTGTaGGGCTCTCGTACCGCCGCCGGGAAGCCGGCTGGCTGTCCGCCC +
Preference number: 2 (lower is better)
Translates to: TGSSGVFLGTANPLL*GSRTAAGKPAGCPP
Trigger: GGGCGGACAGCCAGCCGGCTTCCCGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCACTGCTGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp AGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCAGAGGGTGTCTGACATaGGGGCTGAGGTGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: SSIRSGVPLSRLAMLGSSRGCLT*GLRWRV
Trigger: CACCCGCCACCTCAGCCCTCATGTCAGACACCCTCT...GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCACACAGCCAGGCTGGTaGGGAACCGTGAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSTQPGW*GTVRKE
Trigger: TTCCTTTCTCACGGTTCCGCACCAGCCTGGCTGTGT...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGCAGGCCTGCGGCTCTaGGGCGCCTCTCTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWAGLRL*GASLQR
Trigger: CCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCACTGCTGGCCCCCTCTTaGCACAGTGACCCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPLLAPS*HSDPGP
Trigger: CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAG...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAG +
Preference number: 2 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQDGPVH*WLNHPE
Trigger: CTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCCTGAAGGCATCATCTaGGCAGGCCTGGAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPPEGII*AGLEAH
Trigger: GTGGGCTTCCAGGCCTGCCCAGATGATGCCTTCAGG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCACCGGATGGGGCTGGTaGCTTGGGAGGGACCTCTCT +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGTGWGW*LGRDLS
Trigger: AGAGAGGTCCCTCCCAAGCCACCAGCCCCATCCGGT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTCAGGTGATTTCTCCTaGGTGGCGGCAGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: GRRPAALRRLSAKARVHLSGDFS*VAAGTG
Trigger: ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGCCAGTGTCTTCATGTTaGAGGAGCTCCCGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPPVSSC*RSSRAG
Trigger: GCCTGCACGGGAGCTCCTCCAACATGAAGACACTGG...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp GGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTaGAGAGGCACCAGCCTGCATCCCAGCATCCACTGCAGCACTCGC +
Preference number: 2 (lower is better)
Translates to: GARRLRKEGRESLIC*RGTSLHPSIHCSTR
Trigger: GCGAGTGCTGCAGTGGATGCTGGGATGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 90 bp GGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGTCTGGGAAAGGCCACGCAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GATRAEGGSAGAGPV*WHSRRGLGKATQAV
Trigger: CACTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 90 bp CTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCATCCTGCAGGGGTCCTTTGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LGFSQWSWPRRWPVR*HLWWRHPAGVLWPP
Trigger: AGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 90 bp TTCACGGACTTCTCCCTGGCTCGCATGCGCTCCTCGGCCAACTCCTaGGCTTCCGCGGACACCAAGGGCAGCCCCCTCTTCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: FTDFSLARMRSSANS*ASADTKGSPLFCGC
Trigger: GCAGCCACAGAAGAGGGGGCTGCCCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCTGCATCCACTGGTGCTaGATGCGGCCCCTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: RVSDMRAEVAGAAESSSACIHWC*MRPLGH
Trigger: GTGCCCCAGGGGCCGCATGCAGCACCAGTGGATGCA...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp AGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTTCCTCCTCCACCAAGGCAGAGGCTaGCCCCGGCATGCACGGAGG +
Preference number: 2 (lower is better)
Translates to: SAHQGRSFSSVAPRSFLLHQGRG*PRHARR
Trigger: CCTCCGTGCATGCCGGGGGCAGCCTCTGCCTTGGTG...GAGGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCGCCTGGCCAGGCGGATaGCAACAGAAAATGGAGCGT +
Preference number: 2 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPAWPGG*QQKMER
Trigger: ACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGC...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: QELQGPKAALPGLDRFCGWSPAS*HTRRAA
Trigger: AGCAGCACGGCGTGTATGGCATGACGCAGGGGACCA...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGTAGGACGCACCAGATaGCGCTGTGGCTCCCGCACC +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPVGRTR*RCGSRT
Trigger: GGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTAC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGTTATCTCCCGGATGTaGATGGGAGAGAGATGGCAG +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSVISRM*MGERWQ
Trigger: CTGCCATCTCTCTCCCATGCACATCCGGGAGATAAC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGCCCTCCAGGGAAGCTaGATGTGGACCTCCACGGTA +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGALQGS*MWTSTV
Trigger: TACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSRLRVV*MPLPGQ
Trigger: CTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCG...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGCACTGCGGGACGCCTTaGAGGGGCCAGGCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRHCGTP*RGQASA
Trigger: AGCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTG...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGGCTGCTCCCGCACCTaGTGTTTTATGCGTGTGATA +
Preference number: 2 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSGCSRT*CFMRVI
Trigger: TATCACACGCATAAAACACCAGGTGCGGGAGCAGCC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 90 bp TTCACGCCTGAACCTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCCTGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: FTPEPGVLSVELATA*ARPFASVVAPSCRG
Trigger: ACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTTCAGGCGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCCGGTGCACTGGTGGCTaGATCACCCAGAGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: RVSDMRAEVAGAAESSSARCTGG*ITQSPS
Trigger: GGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCG...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGCCGTGCTGCTCCTCTaGGTGGGAGGTCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPAVLLL*VGGPGG
Trigger: CCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCCTTGGCCTGTGTGGATaGGGGCCCATCCTGAAACCT +
Preference number: 2 (lower is better)
Translates to: QELQGPKAALPGLDRFCGLGLCG*GPILKP
Trigger: AGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAG...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTCTTGGTGCTTCGGTaGGGCGGGCAGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPLLVLR*GGQLLL
Trigger: GAGGAGAAGCTGCCCGCCTCACCGAAGCACCAAGAG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGCTCCTCGGAGCCCCTaGGAGTGGGGCGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPAPRSP*EWGVWG
Trigger: CCCCCACACGCCCCACTCTCAGGGGCTCCGAGGAGC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCTGGAAGCCCTGGGGTaGAGGGCAGTGGATATAGGG +
Preference number: 2 (lower is better)
Translates to: QRLPPACTEERSVRQPKNLEALG*RAVDIG
Trigger: CCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCA +
Preference number: 2 (lower is better)
Translates to: VSLLWGQQELQGPKAALPWFGCH*LARRMP
Trigger: TGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: QELQGPKAALPGLDRFCGMPYTP*CSSEWE
Trigger: CTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCAT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATGGAAGCCCACGGGGTaGAGCATCCTCAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPWKPTG*SILKPR
Trigger: CCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAAGGGACTGGGGAGAATaGACTGCGGGCAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQRDWGE*TAGSRK
Trigger: TTTCCTGCTGCCCGCAGTCCATTCTCCCCAGTCCCT...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGSRNSH*EGESGS
Trigger: GCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGAGGGACCTCTCTCTTaGTGCTTCGGTGAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPEGPLS*CFGEAG
Trigger: GCCCGCCTCACCGAAGCACCAAGAGAGAGGTCCCTC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCCTCGGCCAACTCCTTaGCTTCCGCGGACACCAAGG +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWPRPTP*LPRTPR
Trigger: CCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCCTAGGAGGTTGGAGCTaGGCTTCTCCGGGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSLGGWS*ASPGAG
Trigger: GCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAG...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CTCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAAATGGAG +
Preference number: 2 (lower is better)
Translates to: LQGGARPPQIAAPGG*DATAWPGGCQQKME
Trigger: CTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCGCGTTTCCGTCTGGGTaGATCTTAGGCTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRAFPSG*ILGWEE
Trigger: CTCCTCCCAGCCTAAGATTCACCCAGACGGAAACGC...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCACATTCTCACAGCTTaGGAACGCTTGACGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GRRPAALRRLSAKARVHLHILTA*ERLTQE
Trigger: TTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTG...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGTGGTCAAAATCGGCCTaGGGATGGCCGCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWWSKSA*GWPPGT
Trigger: TGTCCCTGGCGGCCATCCTCAGGCCGATTTTGACCA...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCGGGAGTCGCTGATCTaGTTGAGAGGCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWRESLI*LRGTSL
Trigger: CAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: GRCPSPSEGRAGVADLLESRNSH*EGESGS
Trigger: GCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCACTCGCGTTTCCGTCTaGGTGAATCTTAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPTRVSV*VNLRLG
Trigger: TCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGAAACACAGCCCTGCTaGCCCCCTCTTGCCACAGTG +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPETQPC*PPLATV
Trigger: CACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTC...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCACTCCCCGTCCATCTCTaGCCGGTAATGAACCCGGTG +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPLPVHL*PVMNPV
Trigger: CACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGCAGTGCACGTCAGCCTaGATCTCCAGAGGATCCGCC +
Preference number: 2 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWQCTSA*ISRGSA
Trigger: GGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTG...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGGTCATTCTCATCCAATaGGGCTCCGGAAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLVILIQ*GSGSRG
Trigger: TCCTCTGCTTCCGGAGCCCCATTGGATGAGAATGAC...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTCCTTGGTGTCACTTTaGCTTTGGACAGGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPSLVSL*LWTGRG
Trigger: CCCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGA...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCTCCCTGCGCTCCTCCTaGGCGCTGCGTAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSSLRSS*ALRSSL
Trigger: CAGAGAGCTACGCAGCGCCCAGGAGGAGCGCAGGGA...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp AGTGGAGAGAAGGCGGGCAGTAGACAGGCAGCAGTGGCGTGTTCCTaGGCACAGCTAATCCTCTCCTGTTGGGCTCTCGTACCGCCGCCG +
Preference number: 2 (lower is better)
Translates to: SGEKAGSRQAAVACS*AQLILSCWALVPPP
Trigger: CGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCACTGCTGCCTGTCTACTGCCCGCCTTCTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATCCTCTGCTGAATCTGTaGATAACCCGGGGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDPLLNL*ITRGQS
Trigger: GCTCTGCCCCCGGGTTATTCACAGATTCAGCAGAGG...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGCCGTGCTGCTCCTCTaGGTGGGAGGTCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKAVLLL*VGGPGG
Trigger: CCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCCCTTTATGTCCCCATaGAGATCCGGCACAAGGCAG +
Preference number: 2 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRPFMSP*RSGTRQ
Trigger: CTGCCTTGTGCCGGATCTTCATGGGGACATAAAGGG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 2 (lower is better)
Translates to: GVPLSRLAMLGSSRPFTPSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...AGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTGCATGCATCCACTGGTaGTGCATGCGGCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCACIHW*CMRPLG
Trigger: CCCCAGGGGCCGCATGCAGCACCAGTGGATGCATGC...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGGCATGCATCCACTGGTaGTGCATGCGGCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ACTEERSVRQPKNESRQRACIHW*CMRPLG
Trigger: CCCCAGGGGCCGCATGCAGCACCAGTGGATGCATGC...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp AGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCATCTCTCACCCTCACTaGAGGGTCAGTGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SSIRSGVPLSRLAMLGSSISHPH*RVSGER
Trigger: TCTCTCTCCACTGACCCTGCAGTGAGGGTGAGAGAT...GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGTGTGCTGTGGAGGATaGCACAGTGTTAAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGVCCGG*HSVKAD
Trigger: GTCAGCCTTAACACTGTGGCATCCTCCACAGCACAC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGCCTTGAGTCTGGGCTaGTCCCGCACCTGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWALSLG*SRTWCF
Trigger: AAAACACCAGGTGCGGGAGCAGCCCAGACTCAAGGC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAACCTCCATGGGTGCTCTaGATAGGGAAGCAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQPPWVL*IGKQSS
Trigger: AGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGG...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTAAGAGTGGGGCCTCCATaGGTGCTCTGGATAGGGAAG +
Preference number: 2 (lower is better)
Translates to: TILDVVGVGREAQGGGAVRVGPP*VLWIGK
Trigger: CTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCT...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCACTCATCTGGGCACAGTaGGGAGAGTGGGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSLIWAQ*GEWGLH
Trigger: ATGGAGGCCCCACTCTCCCCACTGTGCCCAGATGAG...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCATGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPCVVFG*RADPSC
Trigger: GCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACA...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTCTCCCGGATGTGCATaGGAGAGAGATGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRSPGCA*ERDGSF
Trigger: GAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGCAACCTCTGCCTCCTaGGTTCACGCCATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPATSAS*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGGAGGCAGAGGTTGC...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTACCAGCCCTGCCTCCTaGGACGTGGGTCTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFTSPAS*DVGLGR
Trigger: CCTCCCTAGACCCACGTCCCAGGAGGCAGGGCTGGT...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 2 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCAGCACCAGTGTCCCCTaGGTCCCCATCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSSTSVP*VPILCC
Trigger: GCAGCAGAGGATGGGGACCCAGGGGACACTGGTGCT...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CCTAGGCCACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTaGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: PRPHSFQATLQTVSL*WGQQELQGPKAALP
Trigger: CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGGTCTAGCGCCAGGGTaGGGCAGGCACCGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: AACGPPRYSASSLVSLESGLAPG*GRHRVE
Trigger: CTCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCCTTTGCAGCTGGGATaGATGTTCAAGTTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPPLQLG*MFKLKH
Trigger: GTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTGACCTTTGCCTCACGTaGGAACAGGTGGAGAATCAG +
Preference number: 2 (lower is better)
Translates to: FLPMPASPRSAFSTATPLDLCLT*EQVENQ
Trigger: CTGATTCTCCACCTGTTCTCACGTGAGGCAAAGGTC...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp GGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 2 (lower is better)
Translates to: GVPLSRLAMLGSSRPFTPFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...AGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGTGCGGTCCACAGGTGTaGGCCCGAGGCTGCGGCGGA +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWCGPQV*ARGCGG
Trigger: TCCGCCGCAGCCTCGGGCTCACACCTGTGGACCGCA...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTGGGCTCGGCCTCCCTaGGCTTCCTCCGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRWARPP*ASSARW
Trigger: CCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCCTGGAAGCCCTGGGGTaGAGGGCAGTGGATATAGGG +
Preference number: 2 (lower is better)
Translates to: HSGESGASMGALDREAEFLEALG*RAVDIG
Trigger: CCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAG...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPPYTPC*SSEWEV
Trigger: GACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGCGCGGGGTGGTCCCCTaGGTCATGCCATACACGCCG +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRRGVVP*VMPYTP
Trigger: CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCG...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGAATAATTCAGGAGCCTaGCCGCACCTCCATGTCTCC +
Preference number: 2 (lower is better)
Translates to: VSLLWGQQELQGPKAALPNNSGA*PHLHVS
Trigger: GGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATT...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGATGACACAGGTTCTTTaGTCCTTTGCAGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPMTQVL*SFAAGM
Trigger: CATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCAT...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTCCGAGAGAAAACCTaGCTGGAGCTGCGCACATTC +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPLREKT*LELRTF
Trigger: GAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGAACMT*WSLWFP
Trigger: CGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGC...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAG +
Preference number: 2 (lower is better)
Translates to: EAFADTGSPGVQGSGYREDGPVH*WLNHPE
Trigger: CTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTC...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCATCACTGCAGGGTCAGTaGAGAGAGAGAGTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSSLQGQ*RERVGS
Trigger: GGAGCCCACTCTCTCTCTCCACTGACCCTGCAGTGA...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PSEGRAGVADLLERHQPAHEWSR*SSARVR
Trigger: CCTCACCCTGGCGCTAGACCATCTGGACCACTCATG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCTGCATGGGAGAGAGATaGCAGCTTCTGGACAGACAA +
Preference number: 2 (lower is better)
Translates to: QELQGPKAALPGLDRFCGCMGER*QLLDRQ
Trigger: TTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCA...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTTGGCCAGGGGCGGGTaGCGAGGCTTCTCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQLARGG*RGFSGR
Trigger: GCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp TCCTTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTTGGGTTaGGCGGCGGCTTCTTCTAGGAGGTTGGAGCTGGGCTTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: SFLYPEKTDFHRDLG*AAASSRRLELGFSG
Trigger: CCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CAGCCGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTaGCACACGCCGGGTCAGCTTGGCATTCAGTTCCTCCTCCGTGTA +
Preference number: 2 (lower is better)
Translates to: QPLKLLLLGLSPSCL*HTPGQLGIQFLLRV
Trigger: TACACGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp ATGGAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTaGGACAGCATGGCAGCCTCCAGGTCCTTGTCCTCCTCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: MERWVGAQDQLRLKP*DSMAASRSLSSSLS
Trigger: GGAGAGAGAGGAGGACAAGGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp GGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTaGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAG +
Preference number: 2 (lower is better)
Translates to: GCHCLARRMPTENGA*GGSSGPVKAEALGQ
Trigger: CTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCCGGAGGAGCGGTCTGTaGGGCAGCCCAAGAATGAAT +
Preference number: 2 (lower is better)
Translates to: HSGESGASMGALDREAEFRRSGL*GSPRMN
Trigger: ATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCG...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCCACTGCGCCCAGCATaGATGCTAGTTTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: RQRLPPACTEERSVRQPKPLRPA*MLVLKS
Trigger: AGATTTTAAAACTAGCATTCATGCTGGGCGCAGTGG...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTGATGGGAGCAGTGTCTaGGCGCCTGCGAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSDGSSV*APASSC
Trigger: ACAGGAGCTCGCAGGCGCTCAGACACTGCTCCCATC...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGCAGGGTCACTGGCTGTaGTCGGATGGGAGAGTGCAC +
Preference number: 2 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMQGHWL*SDGRVH
Trigger: GTGCACTCTCCCATCCGATCACAGCCAGTGACCCTG...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAAGCTTGGAAGCAAACTaGATGAAGGCCGAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPSLEAN*MKAEWP
Trigger: AGGCCACTCGGCCTTCATGCAGTTTGCTTCCAAGCT...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTAGGCCCGGTGCACTGGTaGCTGAATCACCCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVGPVHW*LNHPES
Trigger: GGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCC...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGATCGCGGCTCCGGGTaGTTTGGATGCCACTGCCTG +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKDRGSG*FGCHCL
Trigger: CAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTGGGGTGGGCATGACTaGACGCCCCCATCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRWGGHD*TPPSWV
Trigger: GACCCAGGATGGGGGCGTCCAGTCATGCCCACCCCA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCATTAGGGTCCAGTGTGTaGTGTTCGGCTGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPLGSSV*CSAGGQ
Trigger: CTGCCCTCCAGCCGAACACCACACACTGGACCCTAA...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGGAGAATCAGCGCTGTaGCGGCCACTAGCGGCGTTA +
Preference number: 2 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMGESAL*RPLAAL
Trigger: TAACGCCGCTAGTGGCCGCCACAGCGCTGATTCTCC...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGAGAGAAAACCTGCCTaGAGCTGCGCACATTCTCAC +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPERKPA*SCAHSH
Trigger: GTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATCCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 2 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTAGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 2 (lower is better)
Translates to: TILDVVGVGREAQGGGAVGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATGCTTCCCCCTCAGCTaGGCACGGCAAACGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPCFPLS*ARQTQL
Trigger: GAGCTGCGTTTGCCGTGCCCAGCTGAGGGGGAAGCA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGGGACAGGTGGGAGTTaGGGCCCCTCTGTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGGTGGS*GPSVEG
Trigger: CCCCTCAACAGAGGGGCCCCAACTCCCACCTGTCCC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTaGGACCTCATGACAAGCCCAGTGGCCAAGGGGTCAGGACAGGGC +
Preference number: 2 (lower is better)
Translates to: LPTQGSGHESGTGEG*DLMTSPVAKGSGQG
Trigger: GCCCTGTCCTGACCCCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp CTGGAGGGGGTGCTGGGGCAGGACTTGTCGTCGGCCTTCTTCTTCTaGTCCTTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: LEGVLGQDLSSAFFF*SFLYPEKTDFHRDL
Trigger: CAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCACCCCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACTCTCCAAGGCCACTTaGGGCCTCTGCCCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: TLKPSLILEALGCRAVDILSKAT*GLCPSG
Trigger: ACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCCCTGGCCCCCAAACTaGGACAAGGGCGAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGPWPPN*DKGEFC
Trigger: GCAGAACTCGCCCTTGTCTCAGTTTGGGGGCCAGGG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATCATACCTGCCATAAATaGCAGGGGTTAGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDHTCHK*QGLAFL
Trigger: CAGGAAGGCTAACCCCTGGCATTTATGGCAGGTATG...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTCCAGGGTCCCACCTTaGACCCTCTTGGCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKSRVPP*TLLACV
Trigger: CACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCGGGAGTCGCTGATCTaGTTGAGAGGCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKRESLI*LRGTSL
Trigger: CAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTCAGTGTCTGAGCGCCTaGGAGCTCCTGTCTACCTAC +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFQCLSA*ELLSTY
Trigger: GTAGGTAGACAGGAGCTCGCAGGCGCTCAGACACTG...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGTGGGGTGGGCATGACTaGACGCCCCCATCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWWGGHD*TPPSWV
Trigger: GACCCAGGATGGGGGCGTCCAGTCATGCCCACCCCA...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGTTAGGGTCCAGTGTGTaGTGTTCGGCTGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMLGSSV*CSAGGQ
Trigger: CTGCCCTCCAGCCGAACACCACACACTGGACCCTAA...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTTGCGTTCACCTGGCTTaGCTGGGTTCTCATGGCTCC +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFCVHLA*LGSHGS
Trigger: GGAGCCATGAGAACCCAGCCAAGCCAGGTGAACGCA...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACTGGCTGTGATCGGATaGGAGAGTGCACAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: PSEGRAGVADLLERHQPALAVIG*ESAQLS
Trigger: TGAAAGCTGTGCACTCTCCCATCCGATCACAGCCAG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp GTGCTGGGGCAGGACTTGTCGTCGGCCTTCTTCTTCTTGTCCTTCTaGTACCCGGAGAAGACGGACTTCCACAGGGACTTGGGTTTGGCG +
Preference number: 2 (lower is better)
Translates to: VLGQDLSSAFFFLSF*YPEKTDFHRDLGLA
Trigger: CGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACAC +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPEASLH*EETETH
Trigger: GTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTC...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACGGTGCACTGGTGGCTaGATCACCCAGAGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLRCTGG*ITQSPS
Trigger: GGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGATAAATAGATGCACGTaGGGAGCACCGGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQINRCT*GAPGSP
Trigger: GGGGCTGCCCGGTGCTCCTCACGTGCATCTATTTAT...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 2 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDTQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCCAGGTCGCTCCGTCTaGGGGCCTCATCCACAGCAA +
Preference number: 2 (lower is better)
Translates to: TLREKTCLELRTFSQLENPGRSV*GPHPQQ
Trigger: TTGCTGTGGATGAGGCCCTCAGACGGAGCGACCTGG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTCGCGGGGTGGTCCCCTaGGTCATGCCATACACGCCG +
Preference number: 2 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPRGVVP*VMPYTP
Trigger: CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCG...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTCCTCTACTGGTCGAGTaGACAGTAGAGGCGGTTACC +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFPLLVE*TVEAVT
Trigger: GGTAACCGCCTCTACTGTGCACTCGACCAGTAGAGG...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 2 (lower is better)
Translates to: ACVAASQVLRELLLHGALSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTGGGTCCCCATCCTCTaGTGCCTCCCCTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKWVPIL*CLPFYL
Trigger: GAGATAGAAGGGGAGGCAGCAGAGGATGGGGACCCA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTGCTCCTCCTGGGCGCTaGGTAGCTCTCTGTCGGACG +
Preference number: 2 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTAPPGR*VALCRT
Trigger: CGTCCGACAGAGAGCTACGCAGCGCCCAGGAGGAGC...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGACGGGAAGCACCCTGTaGTTTCCAGAGTCCACCGTG +
Preference number: 2 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQTGSTL*FPESTV
Trigger: CACGGTGGACTCTGGAAAGCACAGGGTGCTTCCCGT...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGGCCTGTCTCCGAGCTaGCTTTTGCACACGCCGGGT +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWGLSPS*LLHTPG
Trigger: ACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTTCACTGCAGGGTCAGTaGAGAGAGAGAGTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAASLQGQ*RERVGS
Trigger: GGAGCCCACTCTCTCTCTCCACTGACCCTGCAGTGA...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTAGGGAGCGCGCGGGGTaGTCCCCTGCGTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: KGFEAAERLARLSASFQRRERAG*SPASCH
Trigger: ATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCT...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPHEWSR*SSARVR
Trigger: CCTCACCCTGGCGCTAGACCATCTGGACCACTCATG...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCACCTTGCACCCTCTTaGCCTGTGTGGATGAGGGCC +
Preference number: 2 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTHLAPS*PVWMRA
Trigger: GGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTG...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTTACCTACACAGGACCTaGGCCGCCCTCAGGTGTGAT +
Preference number: 2 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSYLHRT*AALRCD
Trigger: ATCACACCTGAGGGCGGCCCAGGTCCTGTGTAGGTA...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTCCCAAAGCCCTGACCTaGAGTACGGCTCCCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGPKALT*STAPQC
Trigger: ACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGG...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGAGAAGAGCTGATTCCTaGGGAGACCGGATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQRRADS*GDRMGL
Trigger: CAGCCCCATCCGGTCTCCCCAGGAATCAGCTCTTCT...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCTCCCGTTCTCCTTaGCCAGGGGCGGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSASRSP*PGAGGE
Trigger: CTCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp TGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAATTaGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: CGVRLEGRPLLRPPN*HNNSGACPHLHVSC
Trigger: ACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 90 bp GGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACTTaGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGG +
Preference number: 2 (lower is better)
Translates to: GHLQQIPRPHSFQAT*QTVSLLWGQQELQG
Trigger: CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 90 bp TTCTTGTCCTTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTaGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAGCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: FLSFLYPEKTDFHRD*GLAAASSRRLELGF
Trigger: GAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTCACCCAGCTGGATGTaGTTACAGCTCTGGAACTGC +
Preference number: 2 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCSPSWM*LQLWNC
Trigger: GCAGTTCCAGAGCTGTAATCACATCCAGCTGGGTGA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCAGGATGCACCATCAGTaGCAGCTTTGGAACTGCAGA +
Preference number: 2 (lower is better)
Translates to: HSGESGASMGALDREAEFRMHHQ*QLWNCR
Trigger: TCTGCAGTTCCAAAGCTGTCACTGATGGTGCATCCT...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATTCTCACCAGCCACATaGTTCCAGGGTCCCACCTTG +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPFSPAT*FQGPTL
Trigger: CAAGGTGGGACCCTGGAATCATGTGGCTGGTGAGAA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAAAGGCGCTCCTCAGGTaGTTTCTCCTGGGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPKALLR*FLLGGG
Trigger: GCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGTGATCTCAGATCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAVISDH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGATCTGAGATCAC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGGCCTGGCCAGGCGGATaGCAACAGAAAATGGAGCGT +
Preference number: 2 (lower is better)
Translates to: GYVLTALMDKHPTPISSVAWPGG*QQKMER
Trigger: ACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGC...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTCCGGGTGGTTTGGATaGCACTGCCTGGCCAGGCGG +
Preference number: 2 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPSGWFG*HCLARR
Trigger: CCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCTGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGCVLLI*IIIQEP
Trigger: AGGCTCCTGAATTATTATGCAAATTAGGAGGACGCA...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGTAGGACGCACCAGATaGCGCTGTGGCTCCCGCACC +
Preference number: 2 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSVGRTR*RCGSRT
Trigger: GGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTAC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGGTTCTTTGCTCCTTTaGAGCTGGGATGAATGTTCA +
Preference number: 2 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPGSLLL*SWDECS
Trigger: TGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGTCCACCTTCCAGACTaGAGGCTGCCGTGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWVHLPD*RLPCVL
Trigger: CAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGAC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACACATGTCCCATCACGGTaGAGGGCAGACAGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTHVPSR*RADRRA
Trigger: TGCTCTCCTGTCTGCCCTGCACCGTGATGGGACATG...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACCACCGGGAGGCAAGGTaGCCTGATTCTGAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNHREAR*PDSELP
Trigger: CGGCAGCTCAGAATCAGGGCACCTTGCCTCCCGGTG...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTAGGCATGAGCCATCGTaGCTGGCCACACCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGRHEPS*LATPEL
Trigger: AAGCTCAGGTGTGGCCAGGCACGATGGCTCATGCCT...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 2 (lower is better)
Translates to: ACVAASQVLRELLLHGALCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCGTTCCCGGAGCTCCTaGTGCAGTCGACTCTGCCGG +
Preference number: 2 (lower is better)
Translates to: KGFEAAERLARLSASFQRRSRSS*CSRLCR
Trigger: CCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTAGGGAGCGCGCGGGGTaGTCCCCTGCGTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSRERAG*SPASCH
Trigger: ATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGAGCGGCCCAGGCATTTaGCCACTTAGGGTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: QATLQTVSLLWGQQELQGSGPGI*PLRVQC
Trigger: ACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCT...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCCCTCATCACATGAGTaGTCCAGATGGTCTAGCGCC +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKPSSHE*SRWSSA
Trigger: GGCGCTAGACCATCTGGACCACTCATGTGATGAGGG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCCCTCATCACATGAGTaGTCCAGATGGTCTAGCGCC +
Preference number: 2 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGPSSHE*SRWSSA
Trigger: GGCGCTAGACCATCTGGACCACTCATGTGATGAGGG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCCCTCTTGGCCTGTGTaGATGAGGGCCCATCCTGAA +
Preference number: 2 (lower is better)
Translates to: GYVLTALMDKHPTPISSVPSWPV*MRAHPE
Trigger: TTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCATTTTATGGGACGACTaGGGTTTGAAGATGGAATCT +
Preference number: 2 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGILWDD*GLKMES
Trigger: AGATTCCATCTTCAAACCCCAGTCGTCCCATAAAAT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TCCATCCTCCTGTCTGTCAGAGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 2 (lower is better)
Translates to: SILLSVRVLTRVGLSPLWRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...CCACAGAGGAGAAAGACCGACCCTGGTGAGCACTCTGACAGACAGGAGGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTAGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 2 (lower is better)
Translates to: TILDVVGVGREAQGGGAVGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: HSGESGASMGALDREAEFSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: TLKPSLILEALGCRAVDIGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGTGTCACTTTGGCTTTaGACAGGGAGAGGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPVSLWL*TGRGAS
Trigger: ACTGGCCCCTCTCCCTGTCCAAAGCCAAAGTGACAC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGGAATAAATACTTCCTaGATCTCTGAATTGAGTCTG +
Preference number: 2 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQGINTS*ISELSL
Trigger: CAGACTCAATTCAGAGATTCAGGAAGTATTTATTCC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGCACTTTCCTTCCCAATaGCAGACTTGGAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWHFPSQ*QTWSWG
Trigger: TCCCCAGCTCCAAGTCTGTCATTGGGAAGGAAAGTG...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCCTAAATCAAGGTGTGTaGTTCAAATGCTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: RVSDMRAEVAGAAESSSALNQGV*FKCSPR
Trigger: CCTTGGAGAGCATTTGAATCACACACCTTGATTTAG...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTCGCACCCTGACCCCTaGCCCTGCTTTCGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPSHPDP*PCFRGV
Trigger: TACCCCACGAAAGCAGGGTCAGGGGTCAGGGTGCGA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTCCTCCATGTCTCCTGTaGTGCTGGGGTGGGCATGAC +
Preference number: 2 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTPPCLL*CWGGHD
Trigger: GTCATGCCCACCCCAGCATCACAGGAGACATGGAGG...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGTTCTCACTGGGAGGGTaGGAGTGGCAGCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWFSLGG*EWQLCC
Trigger: ACAGCAGAGCTGCCACTCTCACCCTCCCAGTGAGAA...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTTCTCACCAGCCACATaGTTCCAGGGTCCCACCTTG +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRFSPAT*FQGPTL
Trigger: CAAGGTGGGACCCTGGAATCATGTGGCTGGTGAGAA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGGCTGGTGCGGAACCGTaGGAAAGGAACAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: GYVLTALMDKHPTPISSVAGAEP*ERNSLA
Trigger: AGCCAAACTGTTCCTTTCTCACGGTTCCGCACCAGC...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAGGTGCGGGACGGGGCTaGGGGACAGCACTTCACGGC +
Preference number: 2 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPGAGRG*GTALHG
Trigger: GCCGTGAAGTGCTGTCCCTCAGCCCCGTCCCGCACC...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCATTTGAGTTGTTCTACTaGGTAGTCAGGTTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPFELFY*VVRFLR
Trigger: TCTGAGGAACCTGACTACTCAGTAGAACAACTCAAA...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCCCTAGGGTTATAGCATaGACATCCCCAAAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: HSGESGASMGALDREAEFPRVIA*TSPKVS
Trigger: TGACACCTTTGGGGATGTGCATGCTATAACCCTAGG...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTATCTCTCACCCTCACTaGAGGGTCAGTGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAISHPH*RVSGER
Trigger: TCTCTCTCCACTGACCCTGCAGTGAGGGTGAGAGAT...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCACCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPPYTPC*SSEWEV
Trigger: GACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGG...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGTGGAACAGGGACAATaGCTGTCTGCCAACTGGGGG +
Preference number: 2 (lower is better)
Translates to: TLREKTCLELRTFSQLENVEQGQ*LSANWG
Trigger: CCCCCAGTTGGCAGACAGGCATTGTCCCTGTTCCAC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGACAAGGGCGAGTTCTaGAGAGCCGGAATTCTCACT +
Preference number: 2 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPDKGEF*RAGILT
Trigger: AGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTTGGAAGCCCACGGGGTaGAGCATCCTCAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KGFEAAERLARLSASFQRWKPTG*SILKPR
Trigger: CCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCA...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GACAGGGTCGATACTGTACTGGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: DRVDTVLAEVLTHILRGGNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...ACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSRLRVV*MPLPGQ
Trigger: CTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTGCTCTGCTGTTGGCCTaGCCCAAAACAGAACGGAAA +
Preference number: 2 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGALLLA*PKTERK
Trigger: TTTCCGTTCTGTTTTGGGCCAGGCCAACAGCAGAGC...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCCCTCTTGGCCTGTGTaGATGAGGGCCCATCCTGAA +
Preference number: 2 (lower is better)
Translates to: TLREKTCLELRTFSQLENPSWPV*MRAHPE
Trigger: TTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGTGTACACAGCCAGGCTaGTGCGGAACCGTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTCTQPG*CGTVRK
Trigger: CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACA...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGATTGGCTGGGTTCTCATaGCTCCCAGGGCACACCGCC +
Preference number: 2 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGLAGFS*LPGHTA
Trigger: GGCGGTGTGCCCTGGGAGCCATGAGAACCCAGCCAA...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGGCTACCCTTCTAGCTaGTGTGGGAAAGGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGGYPSS*CGKGLH
Trigger: ATGCAGGCCTTTCCCACACCAGCTAGAAGGGTAGCC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTGTGATTTCTCCTGGGTaGCGGCAGGGACAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTVISPG*RQGQVG
Trigger: TCCCACCTGTCCCTGCCGCCACCCAGGAGAAATCAC...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATTGGCCGGGGCAGGCTaGAAGCGTATGGGGGACTGG +
Preference number: 2 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTLAGAG*KRMGDW
Trigger: CCAGTCCCCCATACGCTTCCAGCCTGCCCCGGCCAA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTCTTCTTCTAGGAGGTTaGAGCTGGGCTTCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: AACGPPRYSASSLVSLESLLLGG*SWASPG
Trigger: CCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAG...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGACTTCCACAGGGACTTaGGTTTGGCGGCGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTTSTGT*VWRRLL
Trigger: AAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCGATAGCAGTAGTGTGGCTTACAGTA +
Preference number: 2 (lower is better)
Translates to: FGLLSRQGSHCRSLP*CVARESIAVVWLTV
Trigger: TACTGTAAGCCACACTACTGCTATCGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGTGGAGGAGTCCTCACTaGCTAGAAGATGAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWWRSPH*LEDEAK
Trigger: CTTAGCCTCATCTTCTAGTCAGTGAGGACTCCTCCA...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCATACTTCCTGAATCTCTaGATTGAGTCTGATGGAGGA +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSYFLNL*IESDGG
Trigger: TCCTCCATCAGACTCAATTCAGAGATTCAGGAAGTA...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGGCGCACTGTGGTTCTaGCGGGGAGCAGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: ARLSASFQRANTGKTRRKGALWF*RGAASL
Trigger: GAGGGAAGCTGCTCCCCGTCAGAACCACAGTGCGCC...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGCTGGTGCGGAACCGTaGGAAAGGAACAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: AACGPPRYSASSLVSLESAGAEP*ERNSLA
Trigger: AGCCAAACTGTTCCTTTCTCACGGTTCCGCACCAGC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTAGGCCACGCAGGCAGTaGAGGTCTTTTCCCACGTCC +
Preference number: 2 (lower is better)
Translates to: KGFEAAERLARLSASFQRRPRRQ*RSFPTS
Trigger: GGACGTGGGAAAAGACCTTCACTGCCTGCGTGGCCT...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAAGGGCTTGGACCTCATaGCAAGCCCAGTGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGRAWTS*QAQWPR
Trigger: CCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCT...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTATCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCCTAGGGTTATAGCATaGACATCCCCAAAGGTGTCA +
Preference number: 2 (lower is better)
Translates to: ACTEERSVRQPKNESRQRPRVIA*TSPKVS
Trigger: TGACACCTTTGGGGATGTGCATGCTATAACCCTAGG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATAACTTGCTGCCCCACTaGCTCTCACAATTTATAAAT +
Preference number: 2 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDNLLPH*LSQFIN
Trigger: ATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTT...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAAGCACTTCACGGCTCTaGCGCCCACCGGACGGCCCC +
Preference number: 2 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTSTSRL*RPPDGP
Trigger: GGGGCCGTCCGGTGGGCGGCAGAGCCGTGAAGTGCT...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTCCAGCAAACACCTTCTaGAAAGCGTTCTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPPANTF*KAFLDL
Trigger: AAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGG...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGAGAGTGGGGCCTCCATaGGTGCTCTGGATAGGGAAG +
Preference number: 2 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVRVGPP*VLWIGK
Trigger: CTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCT...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGAGTGCAGTGGTGCAGTaGCATGATCTCGGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVSAVVQ*HDLGSL
Trigger: CAGCGAGCCGAGATCATGCCACTGCACCACTGCACT...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCATAACCACTGTCACCTaGGGCTCCCCACTGCACGCG +
Preference number: 2 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSITTVT*GSPLHA
Trigger: CGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTAT...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTCTCCCGGATGTGCATaGGAGAGAGATGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: TLREKTCLELRTFSQLENSPGCA*ERDGSF
Trigger: GAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGTCAGCTATGGCTCTTaGGGTAAGGTGGGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGVSYGS*GKVGGK
Trigger: CTTACCTCCCACCTTACCCCAAGAGCCATAGCTGAC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSACMTC*SLWFPA
Trigger: AGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGTGCCCAGTCTGTCCTTaGTGTCACTTTGGCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQCPVCP*CHFGFG
Trigger: TCCAAAGCCAAAGTGACACCAAGGACAGACTGGGCA...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTGCCGCTGGATGATCTaGGCTCGATGCAGCCGCTTA +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQCRWMI*ARCSRL
Trigger: TAAGCGGCTGCATCGAGCCCAGATCATCCAGCGGCA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTaGAGAACGCTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAAC +
Preference number: 2 (lower is better)
Translates to: LSERKPAWSCAHSHS*RTLDAGSHQSTQVN
Trigger: GTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGCCTCCCAGGTTCAAGTaGTTCTCCTGTGTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVPPRFK*FSCVSH
Trigger: GTGGCTCACACAGGAGAATCACTTGAACCTGGGAGG...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAATCGCACCCTGACCCCTaGCCCTGCTTTCGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEESHPDP*PCFRGV
Trigger: TACCCCACGAAAGCAGGGTCAGGGGTCAGGGTGCGA...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGATGAATGTTCAAGTTaGAGCACAGTGTGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMDECSS*STVWFP
Trigger: TGGGAACCACACTGTGCTTCAACTTGAACATTCATC...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR TCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGCTGGACAGACAAGGATaGCACAGGTTCTTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRLDRQG*HRFFAP
Trigger: AGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAG...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCAGCTTGAGAACGCTTaGCGCAGGAAGTCACCAGAG +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQQLENA*RRKSPE
Trigger: CTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATCTCTCTCACGGATATaGGTCCAGTGCACGTCAGCC +
Preference number: 2 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPSLSRI*VQCTSA
Trigger: GGCTGACGTGCACTGGACTCATATCCGTGAGAGAGA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTTTACAGCTCTGGAACTaGCTAAGCATGCATCCACTG +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALQLWN*LSMHPL
Trigger: CAGTGGATGCATGCTTAGGCAGTTCCAGAGCTGTAA...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGAGGATCCGCCGCGTaGATGACCTGCTGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEERGSAA*MTCWSL
Trigger: GAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGATCGGATGGGAGAGTaGACAGCTTTCAGATCCGAG +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWDRMGE*TAFRSE
Trigger: CTCGGATCTGAAAGCTGTGCACTCTCCCATCCGATC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGCTGCATGCGGCCCCTaGGGCACACATTTTCAGTCC +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLAACGP*GTHFQS
Trigger: GGACTGAAAATGTGTGCCCCAGGGGCCGCATGCAGC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGCTCTGCTGTTGGCCTaGCCCAAAACAGAACGGAAA +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWALLLA*PKTERK
Trigger: TTTCCGTTCTGTTTTGGGCCAGGCCAACAGCAGAGC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCACCTTGCACCCTCTTaGCCTGTGTGGATGAGGGCC +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSHLAPS*PVWMRA
Trigger: GGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGACTCGCGTTTCCGTCTaGGTGAATCTTAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWTRVSV*VNLRLG
Trigger: TCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGAAAGGATGCAACTCTaGGAACCTCTCGTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGERMQL*EPLVEG
Trigger: GCCTTCAACGAGAGGTTCCCAGAGTTGCATCCTTTC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTGAAAGTCAGCAAACCTaGCGTCATTCAGGAATAACC +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFESQQT*RHSGIT
Trigger: GGTTATTCCTGAATGACGCCAGGTTTGCTGACTTTC...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 90 bp CCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGGAACTCCTTTaGGGACAGCCTAGGAATGTTCCAGTGTCTTGCAGAAAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PWCPARTLKAMVELL*GQPRNVPVSCRKEL
Trigger: CAGCTCTTTTCTGCAAGACACTGGAACATTCCTAGGCTGTCCCAAAAGGAGTTCCACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGGTGGCGGGTGCAGCTaGAAGCAGCTCGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMGGGCS*KQLGPA
Trigger: TGCTGGGCCGAGCTGCTTTCAGCTGCACCCGCCACC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCGGAGGAGCGGTCTGTaGGGCAGCCCAAGAATGAAT +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLRRSGL*GSPRMN
Trigger: ATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCG...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGGCCGCCCTCAGGTGTaGTGGTGCGGGACGGGGCTG +
Preference number: 2 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLGRPQV*WCGTGL
Trigger: CAGCCCCGTCCCGCACCATCACACCTGAGGGCGGCC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPRYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGCTGTGGACTGGAATaGACAGAAGAGCTGATTCCT +
Preference number: 2 (lower is better)
Translates to: TLREKTCLELRTFSQLENGCGLE*TEELIP
Trigger: AGGAATCAGCTCTTCTGTTCATTCCAGTCCACAGCC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGCTGGAGTGCAGTGGTaGAGTGGCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLAGVQW*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACCACTGCACTCCAGC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGACGTTTCTTTGGTGGTaGTCCAGGGAGCATGAAGAA +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRTFLWW*SREHEE
Trigger: TTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGT...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGGGCTATGTGCTGACTaGTTTGATGGACAAGCACCC +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQGLCAD*FDGQAP
Trigger: GGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCCC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGTTATCTCCCGGATGTaGATGGGAGAGAGATGGCAG +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQVISRM*MGERWQ
Trigger: CTGCCATCTCTCTCCCATGCACATCCGGGAGATAAC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCACAGAAACACAGCCCTaGTGGCCCCCTCTTGCCACA +
Preference number: 2 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLTETQP*WPPLAT
Trigger: TGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGT...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACACGCTTAAGCTCCTCCTaGTTGGCCTGTCTCCGAGCT +
Preference number: 2 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTRLSSS*LACLRA
Trigger: AGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGAGGGACTGGGGAGAATaGACTGCGGGCAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLRDWGE*TAGSRK
Trigger: TTTCCTGCTGCCCGCAGTCCATTCTCCCCAGTCCCT...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAATAACCACTGTCACCTaGGGCTCCCCACTGCACGCG +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEITTVT*GSPLHA
Trigger: CGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTAT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTTGTTTACGTTTCTTTaGTGGTGCTCCAGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKLFTFL*WCSREH
Trigger: ATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGAGATGGCAGCTTCTaGACAGACAAGGATGACACA +
Preference number: 2 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRRDGSF*TDKDDT
Trigger: TGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCT...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCACGTCCAATTTTATaGGACGACTGGGGTTTGAAG +
Preference number: 2 (lower is better)
Translates to: QATLQTVSLLWGQQELQGPRPIL*DDWGLK
Trigger: CTTCAAACCCCAGTCGTCCCATAAAATTGGACGTGG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 2 (lower is better)
Translates to: ASMGALDREAEFWMRMHHHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 2 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 90 bp GAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTTaGTGGAGCTCTGGACGCATCTCACAGGCAAGTTTTACAAGTTGC +
Preference number: 2 (lower is better)
Translates to: EPPGAVCGTFRTPSS*WSSGRISQASFTSC
Trigger: GCAACTTGTAAAACTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp TATAAATGGCGCACCTGGCTTGGCCGGAGGAAGTTGACGTTGATATaGGGATACCGAGTGACAGGGTCGATACTGTACTGGCTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: YKWRTWLGRRKLTLI*GYRVTGSILYWLKF
Trigger: GAACTTCAGCCAGTACAGTATCGACCCTGTCACTCGGTATCCCAATATCAACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 90 bp ATCACCATGGACAGCTTATCAGGCTCCCCCACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: ITMDSLSGSPTEAIS*PVMMGEMPNSFSAM
Trigger: CATTGCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGTGGGGGAGCCTGATAAGCTGTCCATGGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCTAAATCAAGGTGTGTaGTTCAAATGCTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALNQGV*FKCSPR
Trigger: CCTTGGAGAGCATTTGAATCACACACCTTGATTTAG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGCGTTTCCGTCTGGGTaGATCTTAGGCTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEAFPSG*ILGWEE
Trigger: CTCCTCCCAGCCTAAGATTCACCCAGACGGAAACGC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR TCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAAGGCTAGCAGCAGAGTaGGCTCACCGGGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTRLAAE*AHREAR
Trigger: CCTTGCCTCCCGGTGAGCTCACTCTGCTGCTAGCCT...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTATTACAGCTCTGGAACTaGCTAAGCATGCATCCACTG +
Preference number: 2 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLLQLWN*LSMHPL
Trigger: CAGTGGATGCATGCTTAGGCAGTTCCAGAGCTGTAA...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTACGTTTCTTTGGTGGTaGTCCAGGGAGCATGAAGAA +
Preference number: 2 (lower is better)
Translates to: AACGPPRYSASSLVSLESTFLWW*SREHEE
Trigger: TTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGT...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTGACAAGGGCGAGTTCTaGAGAGCCGGAATTCTCACT +
Preference number: 2 (lower is better)
Translates to: KGFEAAERLARLSASFQRDKGEF*RAGILT
Trigger: AGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTC...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTTATGTGTATCCATCCTaGTTCCCTGCCTTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: AACGPPRYSASSLVSLESYVYPS*FPAFKG
Trigger: TCCCTTGAAGGCAGGGAAGCAGGATGGATACACATA...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACGATAATAAGGGCACGTaGAGTAGCAGAAGCTGCGTT +
Preference number: 2 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDDNKGT*SSRSCV
Trigger: AACGCAGCTTCTGCTACTGCACGTGCCCTTATTATC...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAATGATCTGGGCTCGATaGAGCCGCTTAAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTMIWAR*SRLSSS
Trigger: GGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCAT...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTTGTTTACGTTTCTTTaGTGGTGCTCCAGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGLFTFL*WCSREH
Trigger: ATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAA...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTTGTACACAGCCAGGCTaGTGCGGAACCGTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSCTQPG*CGTVRK
Trigger: CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACA...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAATTCGAGGAGAGGTCTaGGAAAGGCCACGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEIRGEV*ERPRRQ
Trigger: CTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAAT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAGCTGGACCGGTTTTGTaGCATTCGAGGAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTAGPVL*HSRRGL
Trigger: CAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGC...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAACACCGCCTAGCCTCTaGGCGCATCTTCCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTTPPSL*AHLPSP
Trigger: GGGAGAGGGAAGATGCGCCCAGAGGCTAGGCGGTGT...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTACAGGGACTTGGGTTTaGCGGCGGCTTCTTCTAGGA +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSTGTWV*RRLLLG
Trigger: TCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp TTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGGGATCTGGTGCTGGCTATCAGGACT +
Preference number: 2 (lower is better)
Translates to: FLSLGERFREMVWPS*LRKEIGDLVLAIRT
Trigger: AGTCCTGATAGCCAGCACCAGATCCCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTTCTCCTGCACTAGCTTaGACCACTCCTGCATCAGCT +
Preference number: 2 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSSPALA*TTPASA
Trigger: AGCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGA...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR GCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTGGGATTTCCTTTCTCTaGCTATTGTTCAAGCTTTTT +
Preference number: 2 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFGISFL*LLFKLF
Trigger: AAAAAGCTTGAACAATAGGCAGAGAAAGGAAATCCC...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 2 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGCCAGCAAACACCTTCTaGAAAGCGTTCTTGGACCTT +
Preference number: 2 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVPANTF*KAFLDL
Trigger: AAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGG...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGCACAGTGGGGAGAGTaGGGCCTCCATGGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMAQWGE*GLHGCS
Trigger: AGAGCACCCATGGAGGCCCCACTCTCCCCACTGTGC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAACCTGGAGCTGTATGTaGGACATTCAGAACACCCAG +
Preference number: 2 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGTWSCM*DIQNTQ
Trigger: CTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGT...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTTCTCTTGTCCCACCATaGAAATTCTATGACCAACTC +
Preference number: 2 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGSLVPP*KFYDQL
Trigger: GAGTTGGTCATAGAATTTCCATGGTGGGACAAGAGA...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACCCCAGACTAATAAGGTaGTGCTCTCTCCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDPRLIR*CSLQLN
Trigger: ATTCAGTTGGAGAGAGCACCACCTTATTAGTCTGGG...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 2 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGGGGGCATCAGCTTTaGGCTTCTCTTTGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: CQVVSFISTCKHRKNTEERGHQL*ASLWGA
Trigger: TGCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 90 bp CCAGCTGTTAGGGAAGGGAAAGGATGCAACTCTGGGAACCTCTCGTaGAAGGCCAAATGGGTAATTCTCTTGTCCCACCATGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: PAVREGKGCNSGNLS*KAKWVILLSHHGNS
Trigger: AGAATTTCCATGGTGGGACAAGAGAATTACCCATTTGGCCTTCAACGAGAGGTTCCCAGAGTTGCATCCTTTCCCTTCCCTAACAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp TGGTTCGGGAATTCACCAGGCTCTCCATTTCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATAAATGGCGCACCTGGCTTGGCCGGA +
Preference number: 2 (lower is better)
Translates to: WFGNSPGSPFPGEYL*FRQYHINGAPGLAG
Trigger: TCCGGCCAAGCCAGGTGCGCCATTTATATGATACTGGCGAAACAAAAGATATTCACCTGGAAATGGAGAGCCTGGTGAATTCCCGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTGGAGTGTACTGGTGTaGTCTCAGATCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLWSVLV*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCACACCAGTACACTCCA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTACCATGGAAATTCTATaGCCAACTCCTCCTCCACAT +
Preference number: 2 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATTMEIL*PTPPPH
Trigger: ATGTGGAGGAGGAGTTGGTCATAGAATTTCCATGGT...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGAACTACAAGCAAAATaGAGCAACCCACAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: EDLTLREKTCLELRTFSQELQAK*SNPQAS
Trigger: TGAGGCTTGTGGGTTGCTGCATTTTGCTTGTAGTTC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGAGCTTCATTTCAACGTaGAAACACAGGAAAAACACG +
Preference number: 2 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTSFIST*KHRKNT
Trigger: CGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGCTGCATGCGGCCCCTaGGGCACACATTTTCAGTCC +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMAACGP*GTHFQS
Trigger: GGACTGAAAATGTGTGCCCCAGGGGCCGCATGCAGC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGCTGGAGTGCAGTGGTaGAGTGGCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMAGVQW*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACCACTGCACTCCAGC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTCAGTTTGTGGAGCTCTaGACGCATCTCACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFQFVEL*THLTGK
Trigger: CTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTG...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTATGAGCCATCGTGCCTaGCCACACCTGAGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFMSHRA*PHLSFS
Trigger: AGAAAAGCTCAGGTGTGGCCAGGCACGATGGCTCAT...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCTCAGGATCCGAACTATaGAACCTCATGGTTATCGGG +
Preference number: 2 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLSGSEL*NLMVIG
Trigger: CCCGATAACCATGAGGTTCCATAGTTCGGATCCTGA...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp TGCAACTCTGGGAACCTCTCGTTGAAGGCCAAATGGGTAATTCTCTaGTCCCACCATGGAAATTCTATGACCAACTCCTCCTCCACATTT +
Preference number: 2 (lower is better)
Translates to: CNSGNLSLKAKWVIL*SHHGNSMTNSSSTF
Trigger: AAATGTGGAGGAGGAGTTGGTCATAGAATTTCCATGGTGGGACAAGAGAATTACCCATTTGGCCTTCAACGAGAGGTTCCCAGAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp GGACAGTGCCTGTCATTAACTGTAAAGGTCCACACTGTGATTCCTTaGGGACACCACATTTTGAACTCCCGTGCTATACCAAGTCACCTT +
Preference number: 2 (lower is better)
Translates to: GQCLSLTVKVHTVIP*GHHILNSRAIPSHL
Trigger: AAGGTGACTTGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTGGACCTTTACAGTTAATGACAGGCACTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACAC +
Preference number: 2 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKEASLH*EETETH
Trigger: GTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTC...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTAAGGATGCACCATCAGTaGCAGCTTTGGAACTGCAGA +
Preference number: 2 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVRMHHQ*QLWNCR
Trigger: TCTGCAGTTCCAAAGCTGTCACTGATGGTGCATCCT...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGTCTGCCCCTCGGGTTTaGAGCCTGTGTTTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMSAPRV*SLCFCP
Trigger: AGGACAGAAACACAGGCTGCAAACCCGAGGGGCAGA...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR GCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTACCCTCCTGTCATACCTaGCATAAATGCCAGGGGTTA +
Preference number: 2 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVPSCHT*HKCQGL
Trigger: TAACCCCTGGCATTTATGGCAGGTATGACAGGAGGG...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPCVLLI*IIIQEP
Trigger: AGGCTCCTGAATTATTATGCAAATTAGGAGGACGCA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCTTTCTAAAGTCATGGTaGACAGTACAAGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLFLKSW*TVQGQG
Trigger: ACCCTGGCCTTGTACTGTCCACCATGACTTTAGAAA...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp CCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTaGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGVSLPGMSLLHYMN*LPHCLSQFINYSGE
Trigger: TTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTACTTCCTGAATCTCTaGATTGAGTCTGATGGAGGA +
Preference number: 2 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLYFLNL*IESDGG
Trigger: TCCTCCATCAGACTCAATTCAGAGATTCAGGAAGTA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR TCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTATGGAAGCAAACTGCATaGAGGCCGAGTGGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLWKQTA*RPSGLG
Trigger: GCCAAGGCCACTCGGCCTTCATGCAGTTTGCTTCCA...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACATCTGAGAGTGTCAGCTaGAAAGGCCTGTGGGTACTT +
Preference number: 2 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTSESVS*KGLWVL
Trigger: AAGTACCCACAGGCCTTTGCAGCTGACACTCTCAGA...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp TTAACTGTAAAGGTCCACACTGTGATTCCTTTGGGACACCACATTTaGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: LTVKVHTVIPLGHHI*NSRAIPSHLLAQNQ
Trigger: TTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTGGACCTTTACAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCAGACTAATAAGGTGGTaGTCTCTCCAACTGAATGTA +
Preference number: 2 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLRLIRW*SLQLNV
Trigger: TACATTCAGTTGGAGAGAGCACCACCTTATTAGTCT...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACACACAAGAGAATCAAGTaGCGTCATCATCGCCTCTAC +
Preference number: 2 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTHKRIK*RHHRLY
Trigger: GTAGAGGCGATGATGACGGCACTTGATTCTCTTGTG...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAACTTTGCCACCCAAGCTaGGGGACAGTGCCTGTCATT +
Preference number: 2 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKLCHPS*GTVPVI
Trigger: AATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAG...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR TCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGTGCCTGGCCACACCTaGGCTTTTCTGAAACTTTTC +
Preference number: 2 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLVPGHT*AFLKLF
Trigger: GAAAAGTTTCAGAAAAGCTCAGGTGTGGCCAGGCAC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATAAGCTGCAAAGGCCTGTaGGTACTTCACGAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: YQRRKGYLFHASHKILPISCKGL*VLHEKD
Trigger: ATCTTTCTCGTGAAGTACCCACAGGCCTTTGCAGCT...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 90 bp AAAAATAAGTTAATTGACAAAAAGGGTTTGAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: KNKLIDKKGLKRLSV*PGCQLHFNVQTQEK
Trigger: TTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAATTAACTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR GCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAACATTTTGAACTCCCGTaGTATACCAAGTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKHFELP*YTKSPS
Trigger: AGAAGGTGACTTGGTATAGCACGGGAGTTCAAAATG...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAAGCTCTGACTCTTTCTTaGTGGTTTTGCTCTTTAACC +
Preference number: 2 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKALTLS*WFCSLT
Trigger: GGTTAAAGAGCAAAACCACCAAGAAAGAGTCAGAGC...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp CCGTGTGGCGGGTGGGCGCCCTGCAGCCCTGCGTGCTaGCCTGCTGGCGACGTCCTCCTCGGCGCCCGTGTC +
Preference number: 3 (lower is better)
Translates to: PCGGWAPCSPAC*PAGDVLLGARV
Trigger: GACACGGGCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp GCAGGCAGCCTCCCGTTCTCCTTGGCCAGGGGCGGGTaGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGG +
Preference number: 3 (lower is better)
Translates to: AGSLPFSLARGG*RGFSGRGQQDG
Trigger: CCCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGCTGCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp GCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTaGGCTTCCTCCGCAAGGTGGCGGGCTCCTCGCCCG +
Preference number: 3 (lower is better)
Translates to: AAGPPRHWARPP*ASSARWRAPRP
Trigger: CGGGCGAGGAGCCCGCCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CTTAGGGCCGTGTGGCGGGTGGGCGCCCTGCAGCCCTaGGTGCTGACCTGCTGGCGACGTCCTCCTCGGCGC +
Preference number: 3 (lower is better)
Translates to: LRAVWRVGALQP*VLTCWRRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGGCCCTAAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp GGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATaGCGCTGTGGCTCCCGCACCCGGGCGCAGGTGATC +
Preference number: 3 (lower is better)
Translates to: GSPGPGRVGRTR*RCGSRTRAQVI
Trigger: GATCACCTGCGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GCGGCAGGCGGCTGGAGCGCCCCTGGCAGGCGGGTCTaGTCCGGATGGCTCCTCGCTGGGCTATGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: AAGGWSAPGRRV*SGWLLAGLCAD
Trigger: GTCAGCACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGGGGCGCTCCAGCCGCCTGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp TGGGCCGCCCTCAGGTGTGATGGTGCGGGACGGGGCTaGGGGACAGCACTTCACGGCTCTGCCGCCCACCGG +
Preference number: 3 (lower is better)
Translates to: WAALRCDGAGRG*GTALHGSAAHR
Trigger: CCGGTGGGCGGCAGAGCCGTGAAGTGCTGTCCCTCAGCCCCGTCCCGCACCATCACACCTGAGGGCGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp GCTGGGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTaGAAAGGCTCGGGTCCACCTTCCAGACTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: AGAQACGSAAPL*KGSGPPSRLQA
Trigger: AGCCTGCAGTCTGGAAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp TCGGGAGCAGAAGGCTGGGGCGCAGGCCTGCGGCTCTaGGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTC +
Preference number: 3 (lower is better)
Translates to: SGAEGWGAGLRL*GASLQRLGSTF
Trigger: GAAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCCCAGCCTTCTGCTCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp GCATCCTCAAGCCCAGGGGCGGGAGCGCCTCCGGCCTaGCCTCCAGGGAAGCTGCATGTGGACCTCCACGGT +
Preference number: 3 (lower is better)
Translates to: ASSSPGAGAPPA*PPGKLHVDLHG
Trigger: ACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGCAGGCCGGAGGCGCTCCCGCCCCTGGGCTTGAGGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp AGGCCAGAGCTGCTGGACAGCTCCCTGCGCTCCTCCTaGGCGCTGCGTAGCTCTCTGTCGGACGGGGACCGG +
Preference number: 3 (lower is better)
Translates to: RPELLDSSLRSS*ALRSSLSDGDR
Trigger: CCGGTCCCCGTCCGACAGAGAGCTACGCAGCGCCCAGGAGGAGCGCAGGGAGCTGTCCAGCAGCTCTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLAAPGG*DATAWP
Trigger: TGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGC...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCTCTCCAAGGCCACTaGAGGCCTCTGCCCCTCGGG +
Preference number: 3 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQALQGH*RPLPLG
Trigger: CCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CAA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTAGTGGGGTGGATGTTTaGGCCGGGGCAGGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: GRRPAALRRLSAKARVHLSGVDV*AGAGWK
Trigger: CTTCCAGCCTGCCCCGGCCAAAACATCCACCCCACT...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp AGCTGGGCTCGGGCCCCTTGCTGCGGTCCACAGGTGTaGGCCCGAGGCTGCGGCGGATCTCCGCACTCTTCA +
Preference number: 3 (lower is better)
Translates to: SWARAPCCGPQV*ARGCGGSPHSS
Trigger: TGAAGAGTGCGGAGATCCGCCGCAGCCTCGGGCTCACACCTGTGGACCGCAGCAAGGGGCCCGAGCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAGGTCCAGGTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: RGVVPCVMPYTP*CSSEWEVQVGL
Trigger: GAGGCCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GGGCACAGCCAGCACATCCTCAGGGAGCGCGCGGGGTaGTCCCCTGCGTCATGCCATACACGCCGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: GHSQHILRERAG*SPASCHTRRAA
Trigger: AGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGCTGGCTGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp CGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTaGCTCCCGCACCCGGGCGCAGGTGATCAGTTCCTC +
Preference number: 3 (lower is better)
Translates to: RTRSRRTHQMPL*LPHPGAGDQFL
Trigger: GAGGAACTGATCACCTGCGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp TCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGG +
Preference number: 3 (lower is better)
Translates to: SALGCPSVAWRC*APPGRSRLNLG
Trigger: CCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp CCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTG +
Preference number: 3 (lower is better)
Translates to: PARSALGCPSVA*RCWAPPGRSRL
Trigger: CAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp GAGACACACAGAGGTGAGGAGGCTCTTAGGGCCGTGTaGCGGGTGGGCGCCCTGCAGCCCTGCGTGCTGACC +
Preference number: 3 (lower is better)
Translates to: ETHRGEEALRAV*RVGALQPCVLT
Trigger: GGTCAGCACGCAGGGCTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAGCCTCCTCACCTCTGTGTGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp CTGCTCAGCTGCCTGGCCATGGCGTCCCGCAGCGCCTaGCTCTTCACGGACTTCTCCCTGGCTCGCATGCGC +
Preference number: 3 (lower is better)
Translates to: LLSCLAMASRSA*LFTDFSLARMR
Trigger: GCGCATGCGAGCCAGGGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACGCCATGGCCAGGCAGCTGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp GGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTCCAGGTGGGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: GVVPCVMPYTPC*SSEWEVQVGLL
Trigger: GAGGAGGCCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp ATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCTCCTCTGAGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ILRERAGWSPAS*HTRRAAPLSGR
Trigger: CCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp CCAGCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTaGGTCATGCCATACACGCCGTGCTGCTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: PAHPQGARGVVP*VMPYTPCCSSE
Trigger: CTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp TGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCTGAGTCTCCTCCGGTA +
Preference number: 3 (lower is better)
Translates to: WRRPPRRPCPAR*SGCARPESPPV
Trigger: TACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp GACGGCGGGGAGAGGACCTCCTCGCTGGTGGCTTCATaGTTCAGGGTGGGCTCCTCGGAGCCCCTGAGAGTG +
Preference number: 3 (lower is better)
Translates to: DGGERTSSLVAS*FRVGSSEPLRV
Trigger: CACTCTCAGGGGCTCCGAGGAGCCCACCCTGAAGCATGAAGCCACCAGCGAGGAGGTCCTCTCCCCGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp GGACTAGGCCTCCCTCAAGACGGCCCGGTGCACTGGTaGCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCG +
Preference number: 3 (lower is better)
Translates to: GLGLPQDGPVHW*LNHPESLPVCP
Trigger: CGGGCACACGGGGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTCTTGAGGGAGGCCTAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 72 bp AGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTaGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCA +
Preference number: 3 (lower is better)
Translates to: RRCQASSDRGSG*FGCHCLARRMP
Trigger: TGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GGGACTTGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTaGAGCTGGGCTTCTCCGGGGGCCGGCCCTCGCCTT +
Preference number: 3 (lower is better)
Translates to: GTWVWRRLLLGG*SWASPGAGPRL
Trigger: AAGGCGAGGGCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTCTCCAAGGCCACTaGAGGCCTCTGCCCCTCGGG +
Preference number: 3 (lower is better)
Translates to: AVVLQLDPLWGAPQSLGDALQGH*RPLPLG
Trigger: CCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGC...ATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPGAGPV*WHSRRG
Trigger: ACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCC...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCGCGGAGTCCGAGGTGTaGAAGCTCTGGCTGCCCAGT +
Preference number: 3 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRAESEV*KLWLPS
Trigger: ACTGGGCAGCCAGAGCTTCAACACCTCGGACTCCGC...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp ATGAAGGCCGAGTGGCCTTGGCCTCACCAGGGCGGGTaGTGGGAGCAGTGTCTGAGCGCCTGCGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: MKAEWPWPHQGG*WEQCLSACELL
Trigger: CAGGAGCTCGCAGGCGCTCAGACACTGCTCCCATCACCCGCCCTGGTGAGGCCAAGGCCACTCGGCCTTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp CCCGTGTCCAGCACGCTGCTCAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: PVSSTLLRLCSA*VSSGTSCSASA
Trigger: GGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp CCATGGAAAGCCCAAGGTCAGCACAGCCACTCAGCCTaGTCCACTGCGGGACGCCTTGGAGGGGCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: PWKAQGQHSHSA*STAGRLGGARP
Trigger: AGGCCTGGCCCCTCCAAGGCGTCCCGCAGTGGAGCAGGCTGAGTGGCTGTGCTGACCTTGGGCTTTCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp AGCTGCAGCTCTGCCCTTACGACGGGAAGCACCCTGTaGTTTCCAGAGTCCACCGTGGCCCCGCTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: SCSSALTTGSTL*FPESTVAPLEG
Trigger: CCCCTCCAGCGGGGCCACGGTGGACTCTGGAAAGCACAGGGTGCTTCCCGTCGTAAGGGCAGAGCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp GACGGACTAGGCCTCCCTCAAGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAGTCCCTCCCCGTGTGC +
Preference number: 3 (lower is better)
Translates to: DGLGLPQDGPVH*WLNHPESLPVC
Trigger: GCACACGGGGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTCTTGAGGGAGGCCTAGTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 72 bp GTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAGGCGGATGCCAACAGA +
Preference number: 3 (lower is better)
Translates to: VPGLLRSRLRVV*MPLPGQADANR
Trigger: TCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTaGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCC +
Preference number: 3 (lower is better)
Translates to: AAQAFGHLGSSV*CSAGGQTPPAS
Trigger: GGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GGCTGGAGCGCCCCTGGCAGGCGGGTCTGGTCCGGATaGCTCCTCGCTGGGCTATGTGCTGACTGCTTTGAT +
Preference number: 3 (lower is better)
Translates to: GWSAPGRRVWSG*LLAGLCADCFD
Trigger: ATCAAAGCAGTCAGCACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGGGGCGCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTaGCATTCGAGGAGAGGTCTGGGAAAGGCCACGCAG +
Preference number: 3 (lower is better)
Translates to: AEGGSAGAGPVL*HSRRGLGKATQ
Trigger: CTGCGTGGCCTTTCCCAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GATGGCCGCCAGGGACAGAGGCCTGAAGGCATCATCTaGGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCT +
Preference number: 3 (lower is better)
Translates to: DGRQGQRPEGII*AGLEAHGVQHP
Trigger: AGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCCCAGATGATGCCTTCAGGCCTCTGTCCCTGGCGGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp AGCTGGCCACGGCGTTGGCCCGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGGGTCCTTTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: SWPRRWPVRLHL*WRHPAGVLWPP
Trigger: AGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp TCTCCCTGGCTCGCATGCGCTCCTCGGCCAACTCCTTaGCTTCCGCGGACACCAAGGGCAGCCCCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: SPWLACAPRPTP*LPRTPRAAPSS
Trigger: AGAAGAGGGGGCTGCCCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp CGTCCCGCAGCGCCTGGCTCTTCACGGACTTCTCCCTaGCTCGCATGCGCTCCTCGGCCAACTCCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: RPAAPGSSRTSP*LACAPRPTPWL
Trigger: AAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp TGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAGCTaGGCTTCTCCGGGGGCCGGCCCTCGCCTTTGGACT +
Preference number: 3 (lower is better)
Translates to: WVWRRLLLGGWS*ASPGAGPRLWT
Trigger: AGTCCAAAGGCGAGGGCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTCCTCGGCCAACTCCTaGGCTTCCGCGGACACCAAG +
Preference number: 3 (lower is better)
Translates to: VSLLWGQQELQGPKAALPSSANS*ASADTK
Trigger: CTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CTCAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATCCTGCAGGGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: LSGAGHGVGPSV*ICGGAILQGSF
Trigger: AAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp ACAGGCGGTAGTTCTCCAGCTCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: TGGSSPARSALG*PSVAWRCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACCGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp GCCATGCGTTCCCGGAGCTCCTGCTGCAGTCGACTCTaGCGGTCTTCCAGCTCCAGCTCCCGGGCAAAGATC +
Preference number: 3 (lower is better)
Translates to: AMRSRSSCCSRL*RSSSSSSRAKI
Trigger: GATCTTTGCCCGGGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp AGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTaGACCGGTTTTGTGGCATTCGAGGAGAGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: RSYKGRRRLCRG*TGFVAFEERSG
Trigger: CCCAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTaGAGTACGGCTCCCCAGTGTGAGGCTCCCGTGGTT +
Preference number: 3 (lower is better)
Translates to: ARTLLCIPKALT*STAPQCEAPVV
Trigger: AACCACGGGAGCCTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp GTGGCGTGTTCCTTGGCACAGCTAATCCTCTCCTGTTaGGCTCTCGTACCGCCGCCGGGAAGCCGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: VACSLAQLILSC*ALVPPPGSRLA
Trigger: AGCCAGCCGGCTTCCCGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TGGCCACGGCGTTGGCCCGTCCGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTCCTTTGGCCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: WPRRWPVRLHLW*RHPAGVLWPPF
Trigger: GAAAGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRGAGPV*WHSRRG
Trigger: ACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCC...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTTAAGCTCCTCCTGCTaGGCCTGTCTCCGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLSSSC*ACLRAA
Trigger: GGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp TGTCTACCTACACAGGACCTGGGCCGCCCTCAGGTGTaGTGGTGCGGGACGGGGCTGAGGGACAGCACTTCA +
Preference number: 3 (lower is better)
Translates to: CLPTQDLGRPQV*WCGTGLRDSTS
Trigger: TGAAGTGCTGTCCCTCAGCCCCGTCCCGCACCATCACACCTGAGGGCGGCCCAGGTCCTGTGTAGGTAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp CTTGGCCTCACCAGGGCGGGTGATGGGAGCAGTGTCTaGGCGCCTGCGAGCTCCTGTCTACCTACACAGGAC +
Preference number: 3 (lower is better)
Translates to: LGLTRAGDGSSV*APASSCLPTQD
Trigger: GTCCTGTGTAGGTAGACAGGAGCTCGCAGGCGCTCAGACACTGCTCCCATCACCCGCCCTGGTGAGGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp GAACTGCAGACACCAAGGCAGAGGCTGCCCCCGGCATaGACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAAT +
Preference number: 3 (lower is better)
Translates to: ELQTPRQRLPPA*TEERSVRQPKN
Trigger: ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTTGGTGTCTGCAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR GCA 72 bp TCACCTCCTTACAGGCGTGCTGCCCGTACGCTGCTGTaGATCCCCAAAGCCCTGACCTGGAGTACGGCTCCC +
Preference number: 3 (lower is better)
Translates to: SPPYRRAARTLL*IPKALTWSTAP
Trigger: GGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCAGCACGCCTGTAAGGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp CGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTCCGTTTGCATCTGTGG +
Preference number: 3 (lower is better)
Translates to: RSRLNLGFSQWS*PRRWPVRLHLW
Trigger: CCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTTCAGGCGTGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp TTCCAGAGTCCACCGTGGCCCCGCTGGAGGGGGTGCTaGGGCAGGACTTGTCGTCGGCCTTCTTCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: FQSPPWPRWRGC*GRTCRRPSSSC
Trigger: ACAAGAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCACCCCCTCCAGCGGGGCCACGGTGGACTCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCTGCGTCCTCCTAATTaGCATAATAATTCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: GRPGSPRGAASSSPGAGALRPPN*HNNSGA
Trigger: GGCTCCTGAATTATTATGCAAATTAGGAGGACGCAG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: VSLLWGQQELQGPKAALPKRLSV*PGCQLH
Trigger: ATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTT...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCCACTGCGGGACGCCTaGGAGGGGCCAGGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: TLREKTCLELRTFSQLENPLRDA*EGPGLC
Trigger: GCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTGG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGGATGACACAGGTTCTTaGCTCCTTTGCAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPDDTGS*LLCSWD
Trigger: ATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATC...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 3 (lower is better)
Translates to: RQRLPPACTEERSVRQPKMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTGTCCTTGGTGTCACTTaGGCTTTGGACAGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: FLPMPASPRSAFSTATPLVLGVT*ALDRER
Trigger: CCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGAC...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp AGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTaGGGCAGCCCAAGAATGAATCTAGGCAGAGGGTGT +
Preference number: 3 (lower is better)
Translates to: RGCPRHARRSGL*GSPRMNLGRGC
Trigger: ACACCCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp GGTGGCTTGGGAGGGACCTCTCTCTTGGTGCTTCGGTaGGGCGGGCAGCTTCTCCTCATCTTCCGACACCCT +
Preference number: 3 (lower is better)
Translates to: GGLGGTSLLVLR*GGQLLLIFRHP
Trigger: AGGGTGTCGGAAGATGAGGAGAAGCTGCCCGCCTCACCGAAGCACCAAGAGAGAGGTCCCTCCCAAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp TCTTCATCCAGAACTCCTCCACCAGGTCGCTCCGTCTaGGGGCCTCATCCACAGCAAGGGGGCTGCCCAGTC +
Preference number: 3 (lower is better)
Translates to: SSSRTPPPGRSV*GPHPQQGGCPV
Trigger: GACTGGGCAGCCCCCTTGCTGTGGATGAGGCCCTCAGACGGAGCGACCTGGTGGAGGAGTTCTGGATGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp TCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCAACAGAAAATGGAGCG +
Preference number: 3 (lower is better)
Translates to: SSDRGSGWFGCH*LARRMPTENGA
Trigger: CGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp CAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATaGCACTGCCTGGCCAGGCGGATGCCAACAGAAAAT +
Preference number: 3 (lower is better)
Translates to: QASSDRGSGWFG*HCLARRMPTEN
Trigger: ATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp CCTTTATGTCCCCATGAAGATCCGGCACAAGGCAGGTaGCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCT +
Preference number: 3 (lower is better)
Translates to: PLCPHEDPAQGR*PSPSEGRAGVA
Trigger: AGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCTTCATGGGGACATAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp TCCCCGACCAGAGCCACTAGTAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCGTTCTCGGAGGCATAC +
Preference number: 3 (lower is better)
Translates to: SPTRATSNWCPF*SRTKAAFSEAY
Trigger: GTATGCCTCCGAGAACGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCTGGTCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp TTGGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCCTTTCCAGACAGGGGA +
Preference number: 3 (lower is better)
Translates to: LARPFASVVAPS*RGPLASFPDRG
Trigger: TCCCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp ACCTGCTGCAGCTGCCGCTGGATGATCTGGGCTCGATaGAGCCGCTTAAGCTCCTCCTGCTTGGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: TCCSCRWMIWAR*SRLSSSCLACL
Trigger: GAGACAGGCCAAGCAGGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCATCCAGCGGCAGCTGCAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp CAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTaGCCAGGCGGATGCCAACAGAAAATGGAGCGTTGG +
Preference number: 3 (lower is better)
Translates to: QIAAPGGLDATA*PGGCQQKMERW
Trigger: CCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp CAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTaGGGCTCCCCACTGCACGCGGGACTCGACCACTTT +
Preference number: 3 (lower is better)
Translates to: QEVEPSQITTVT*GSPLHAGLDHF
Trigger: AAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GAGCGCCTCCGGCCTGCCCTCCAGGGAAGCTGCATGTaGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAG +
Preference number: 3 (lower is better)
Translates to: ERLRPALQGSCM*TSTVFSLQFSQ
Trigger: CTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGCAGGCCGGAGGCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCATTGACAAAAAGGGTTaGAAGCGGCTGAGCGTCTTG +
Preference number: 3 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPIDKKG*KRLSVL
Trigger: CAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAAT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCGCTTCTTCTAGGAGGTaGGAGCTGGGCTTCTCCGGG +
Preference number: 3 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSASSRR*ELGFSG
Trigger: CCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGC...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp CTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTGTaGATAACCCGGGGGCAGAGCCTGCCACTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: LPVCPSFPLLNL*ITRGQSLPLSF
Trigger: GAAGGAAAGTGGCAGGCTCTGCCCCCGGGTTATTCACAGATTCAGCAGAGGGAAGGACGGGCACACGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp GAGCTAGTGATTCGGGGCTCGCCCTTTATGTCCCCATaGAGATCCGGCACAAGGCAGGTGCCCGTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: ELVIRGSPFMSP*RSGTRQVPVAF
Trigger: GAAGGCGACGGGCACCTGCCTTGTGCCGGATCTTCATGGGGACATAAAGGGCGAGCCCCGAATCACTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp CCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGTGTaGGGCTCCCGTGGTTCTCAGAACCAGGAACAAGCA +
Preference number: 3 (lower is better)
Translates to: PQSPDLEYGSPV*GSRGSQNQEQA
Trigger: TGCTTGTTCCTGGTTCTGAGAACCACGGGAGCCTCACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp TCTTCTTGCTCTTCCCACTGGAGCCCTCGGATGAAGTaGAAGAGCCATCTGGGCCCCCTGAGTCCGACGGCG +
Preference number: 3 (lower is better)
Translates to: SSCSSHWSPRMK*KSHLGPLSPTA
Trigger: CGCCGTCGGACTCAGGGGGCCCAGATGGCTCTTTCACTTCATCCGAGGGCTCCAGTGGGAAGAGCAAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CTCGGGTCCACCTTCCAGACTGCAGGCTGCCGTGTGTaGTGTGGAGGATGCCACAGTGTTAAGGCTGACCAG +
Preference number: 3 (lower is better)
Translates to: LGSTFQTAGCRV*CGGCHSVKADQ
Trigger: CTGGTCAGCCTTAACACTGTGGCATCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGACCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp GAGGGTAAGCCCCTCAGCCCTGAGCTCACTGGCCTTTaGCACCCAAGCTGGGGGACAGTGCCTGTCATTAAC +
Preference number: 3 (lower is better)
Translates to: EGKPLSPELTGL*HPSWGTVPVIN
Trigger: GTTAATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTCAGGGCTGAGGGGCTTACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp CTGAGCTGCCGGACTAAGATGTTCTGGACTCTGAGCTaGCGGAGGGTAAGCCCCTCAGCCCTGAGCTCACTG +
Preference number: 3 (lower is better)
Translates to: LSCRTKMFWTLS*RRVSPSALSSL
Trigger: CAGTGAGCTCAGGGCTGAGGGGCTTACCCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCGGCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp GGGTCCTTTGGCCTCCTTTCCAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGCGTAGCCAGAGAGTCG +
Preference number: 3 (lower is better)
Translates to: GSFGLLSRQGSH*RSLPLCVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp AGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTaGACACGCCGGGTCAGCTTGGCATTCAGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSSCLACLRAAF*TRRVSLAFSSS
Trigger: GGAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CCGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTaGCTTTTGCACACGCCGGGTCAGCTTGGCATTCAG +
Preference number: 3 (lower is better)
Translates to: PLKLLLLGLSPS*LLHTPGQLGIQ
Trigger: CTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp GACACACAGCATCTCTCACCCTCACTGCAGGGTCAGTaGAGAGAGAGAGTGGGCTCCCCCTCATCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: DTQHLSPSLQGQ*RERVGSPSSGH
Trigger: GTGCCCAGATGAGGGGGAGCCCACTCTCTCTCTCCACTGACCCTGCAGTGAGGGTGAGAGATGCTGTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CCA 72 bp GGTGCCCTGATTCTGAGCTGCCGGACTAAGATGTTCTaGACTCTGAGCTGCCGGAGGGTAAGCCCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: GALILSCRTKMF*TLSCRRVSPSA
Trigger: GGCTGAGGGGCTTACCCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCGGCAGCTCAGAATCAGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp GCCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTTaGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: AWPGGCQQKMER*VGAQDQLRLKP
Trigger: GGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGAGCGTCTTGCCAGGTaGTCAGCTTCATTTCAACGT +
Preference number: 3 (lower is better)
Translates to: VSLLWGQQELQGPKAALPERLAR*SASFQR
Trigger: ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp GTCATGAAAGTGGGACAGGTGAGGGCTTGGACCTCATaGCAAGCCCAGTGGCCAAGGGGTCAGGACAGGGCA +
Preference number: 3 (lower is better)
Translates to: VMKVGQVRAWTS*QAQWPRGQDRA
Trigger: TGCCCTGTCCTGACCCCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCCACTTTCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp ATGATCTGGGCTCGATGCAGCCGCTTAAGCTCCTCCTaGTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGC +
Preference number: 3 (lower is better)
Translates to: MIWARCSRLSSS*LACLRAAFCTR
Trigger: GCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp AACGGAAATGCACCCTCATCACATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGGCAGGCACCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: NGNAPSSHEWSR*SSARVRQAPGG
Trigger: TCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp AGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGCTCTGCTGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: RQGRVLQSRNSH*EGESGSSAVGL
Trigger: CAGGCCAACAGCAGAGCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp TTGCCTCACGTGAGAACAGGTGGAGAATCAGCGCTGTaGCGGCCACTAGCGGCGTTATCTCCCGGATGTGCA +
Preference number: 3 (lower is better)
Translates to: LPHVRTGGESAL*RPLAALSPGCA
Trigger: TGCACATCCGGGAGATAACGCCGCTAGTGGCCGCCACAGCGCTGATTCTCCACCTGTTCTCACGTGAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLAAPGG*DATAWP
Trigger: TGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGAAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 3 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 3 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGTGCTTTCGTGGGGTATaGTTTACGTTTCTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: GRCPSPSEGRAGVADLLECFRGV*FTFLWW
Trigger: CCACCAAAGAAACGTAAACAATACCCCACGAAAGCA...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCTGCGTCCTCCTAATTaGCATAATAATTCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLRPPN*HNNSGA
Trigger: GGCTCCTGAATTATTATGCAAATTAGGAGGACGCAG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTTCCAGGGTCCCACCTaGCACCCTCTTGGCCTGTGT +
Preference number: 3 (lower is better)
Translates to: GYVLTALMDKHPTPISSVFQGPT*HPLGLC
Trigger: ACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGAA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCACGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 3 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGAGGGGGCATCAGCTTaGGGCTTCTCTTTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTEGASA*GFSLGS
Trigger: GCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCTC...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGGCAGGCCCAGCCTTTaGGGGATGGACAGAGGCTTG +
Preference number: 3 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWGRPSL*GMDRGL
Trigger: CAAGCCTCTGTCCATCCCCAAAAGGCTGGGCCTGCC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp TGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACACAGAGGTGAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: CGQQERQEASLH*EETETHRGEEA
Trigger: AGCCTCCTCACCTCTGTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp CTCCGTGTAGGTTCTTGGCTCTCGCCGGGACTTCTGTaGGGACTTCTCAAGGACATCGTCGCTGGAGAGGTC +
Preference number: 3 (lower is better)
Translates to: LRVGSWLSPGLL*GLLKDIVAGEV
Trigger: GACCTCTCCAGCGACGATGTCCTTGAGAAGTCCTCACAGAAGTCCCGGCGAGAGCCAAGAACCTACACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp GGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCTGCCCGCACCTCCATG +
Preference number: 3 (lower is better)
Translates to: GWRADPSCVLLI*IIIQEPARTSM
Trigger: CATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp CGTAGACCCGCTTCTGGCAGAAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGG +
Preference number: 3 (lower is better)
Translates to: RRPASGRSSMCR*LPGSAGTPSSW
Trigger: CCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCTACTTCTGCCAGAAGCGGGTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp TCTGGCAGGGTCACTGGCTGTGATCGGATGGGAGAGTaGACAGCTTTCAGATCCGAGGGGGCATCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: SGRVTGCDRMGE*TAFRSEGASAL
Trigger: CAAAGCTGATGCCCCCTCGGATCTGAAAGCTGTGCACTCTCCCATCCGATCACAGCCAGTGACCCTGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp ATTTGGCCACTTAGGGTCCAGTGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGCGTCCTCCTAATTTGC +
Preference number: 3 (lower is better)
Translates to: IWPLRVQCVVFG*RADPSCVLLIC
Trigger: GCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCTAAGTGGCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp TCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTaGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCT +
Preference number: 3 (lower is better)
Translates to: SFQATLQTVSLL*GQQELQGPKAA
Trigger: AGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp ACACTGCCCAGTCATAGCTTTACCAGCCCTGCCTCCTaGGACGTGGGTCTAGGGAGGATGGCTGAGTTACAC +
Preference number: 3 (lower is better)
Translates to: TLPSHSFTSPAS*DVGLGRMAELH
Trigger: GTGTAACTCAGCCATCCTCCCTAGACCCACGTCCCAGGAGGCAGGGCTGGTAAAGCTATGACTGGGCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTTaGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAGC +
Preference number: 3 (lower is better)
Translates to: SCTRRRRTSTGT*VWRRLLLGGWS
Trigger: GCTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CCA 72 bp GTCTCCGAGCTGCCTTTTGCACACGCCGGGTCAGCTTaGCATTCAGTTCCTCCTCCGTGTAGGTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: VSELPFAHAGSA*HSVPPPCRFLA
Trigger: AGCCAAGAACCTACACGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTTCCCAATGACAGACTaGGAGCTGGGGACATGTCAG +
Preference number: 3 (lower is better)
Translates to: ACTEERSVRQPKNESRQRFPMTD*ELGTCQ
Trigger: CTGACATGTCCCCAGCTCCAAGTCTGTCATTGGGAA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CAA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACTCTGCCCCTCGGGTTaGCAGCCTGTGTTTCTGTCC +
Preference number: 3 (lower is better)
Translates to: TLKPSLILEALGCRAVDILCPSG*QPVFLS
Trigger: GGACAGAAACACAGGCTGCAAACCCGAGGGGCAGAG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATGCTTTCGTGGGGTATaGTTTACGTTTCTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPCFRGV*FTFLWW
Trigger: CCACCAAAGAAACGTAAACAATACCCCACGAAAGCA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTGCTCGCCTTCCGGCTTaGGCAGGCCCAGCCTTTTGG +
Preference number: 3 (lower is better)
Translates to: KGFEAAERLARLSASFQRARLPA*AGPAFW
Trigger: CCAAAAGGCTGGGCCTGCCAAAGCCGGAAGGCGAGC...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp AGCCCAAGAATGAATCTAGGCAGAGGGTGTCTGACATaGGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SPRMNLGRGCLT*GLRWRVQLKAA
Trigger: AGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATTCTTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp CCAGATGCCGCTGTGGCTCCCGCACCCGGGCGCAGGTaGTCAGTTCCTCTAGTAAAGATACACAAACGAAGT +
Preference number: 3 (lower is better)
Translates to: PDAAVAPAPGRR*SVPLVKIHKRS
Trigger: ACTTCGTTTGTGTATCTTTACTAGAGGAACTGATCACCTGCGCCCGGGTGCGGGAGCCACAGCGGCATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp CGTAGCGCACCATGGCGTTCTTCTCCTGCACTAGCTTaGACCACTCCTGCATCAGCTTGGGGTCGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: RSAPWRSSPALA*TTPASAWGRPS
Trigger: AGAAGGACGACCCCAAGCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGAAGAACGCCATGGTGCGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR GCA 72 bp CTTCATGGAGCCCTGTCTCCGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAATTTGGCCAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: LHGALSPYADGL*GRILFKFGQQL
Trigger: CAGCTGCTGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp TCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATAGCAGTAGTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SRQGSHCRSLPL*VARESIAVVWL
Trigger: AAGCCACACTACTGCTATCGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp ACTGGGAGGGTGAGAGTGGCAGCTCTGCTGTTGGCCTaGCCCAAAACAGAACGGAAATGCACCCTCATCACA +
Preference number: 3 (lower is better)
Translates to: TGRVRVAALLLA*PKTERKCTLIT
Trigger: TGTGATGAGGGTGCATTTCCGTTCTGTTTTGGGCCAGGCCAACAGCAGAGCTGCCACTCTCACCCTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp CTCAGCCCTGAGCTCACTGGCCTTTGCCACCCAAGCTaGGGGACAGTGCCTGTCATTAACTGTAAAGGTCCA +
Preference number: 3 (lower is better)
Translates to: LSPELTGLCHPS*GTVPVINCKGP
Trigger: TGGACCTTTACAGTTAATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTCAGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTACTTCCTGGAATGTCCTaGCTACATTACATGAACTTG +
Preference number: 3 (lower is better)
Translates to: TILDVVGVGREAQGGGAVLPGMS*LHYMNL
Trigger: CAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAG...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 3 (lower is better)
Translates to: ACVAASQVLRELLLHGALNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGATTTCTCCTGCAGGCTaGAGTCCTCAGTCTTGTCGT +
Preference number: 3 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMISPAG*SPQSCR
Trigger: ACGACAAGACTGAGGACTCAAGCCTGCAGGAGAAAT...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp GTGATACGAAGAGAAAGGCTAATAAATAGATGCACGTaGGGAGCACCGGGCAGCCCCGGACCAGGTCGCGTA +
Preference number: 3 (lower is better)
Translates to: VIRRERLINRCT*GAPGSPGPGRV
Trigger: TACGCGACCTGGTCCGGGGCTGCCCGGTGCTCCTCACGTGCATCTATTTATTAGCCTTTCTCTTCGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp CCCTGCCTCCTGGGACGTGGGTCTAGGGAGGATGGCTaGGTTACACACAAGAGAATCAAGTGCCGTCATCAT +
Preference number: 3 (lower is better)
Translates to: PCLLGRGSREDG*VTHKRIKCRHH
Trigger: ATGATGACGGCACTTGATTCTCTTGTGTGTAACTCAGCCATCCTCCCTAGACCCACGTCCCAGGAGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTAATCGGCTGAACACTTaGAAGCCTTCGCTGATACTG +
Preference number: 3 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCNRLNT*KPSLIL
Trigger: CAGTATCAGCGAAGGCTTCAAAGTGTTCAGCCGATT...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CAA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: AACGPPRYSASSLVSLESKRLSV*PGCQLH
Trigger: ATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTT...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGGCCGTCAGAGGAGCTaGGAAGCAAACTGCATGAAG +
Preference number: 3 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAGRQRS*EANCMK
Trigger: CTTCATGCAGTTTGCTTCCAAGCTCCTCTGACGGCC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAGGGACAGGTGAGGGCTaGGACCTCATGACAAGCCCA +
Preference number: 3 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGGTGEG*DLMTSP
Trigger: TGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCC...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGCTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 3 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 72 bp CAGGGTCCCACCTTGCACCCTCTTGGCCTGTGTGGATaGGGGCCCATCCTGAAACCTTCTTTAACATATGTG +
Preference number: 3 (lower is better)
Translates to: QGPTLHPLGLCG*GPILKPSLTYV
Trigger: CACATATGTTAAAGAAGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTGGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp CTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCTTaGCGCAGGAAGTCACCAGAGTACTCAAGTCAACCG +
Preference number: 3 (lower is better)
Translates to: LELRTFSQLENA*RRKSPEYSSQP
Trigger: CGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp GAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTaGGAACGCTTGACGCAGGAAGTCACCAGAGTACTC +
Preference number: 3 (lower is better)
Translates to: ENLPGAAHILTA*ERLTQEVTRVL
Trigger: GAGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTaGGGAACCGTGAGAAAGGAACAGTTTGGCTATAGG +
Preference number: 3 (lower is better)
Translates to: LSGLMSCTQPGW*GTVRKEQFGYR
Trigger: CCTATAGCCAAACTGTTCCTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp TCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTaGGTTCACCTGGCTTGGCTGGGTTCTCATGGCTCC +
Preference number: 3 (lower is better)
Translates to: SDDNKGTCSSRS*VHLAWLGSHGS
Trigger: GGAGCCATGAGAACCCAGCCAAGCCAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp TTTCCAGGACATGGTGAGATCTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCTCTGGCACCAACCCAG +
Preference number: 3 (lower is better)
Translates to: FPGHGEICHVYP*IAICLPLAPTQ
Trigger: CTGGGTTGGTGCCAGAGGCAGACAGATGGCTATGCAGGGGTAAACGTGACAGATCTCACCATGTCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp ACTCCTTCTTCATGGAGCCCTGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCTCTTCAAATTTGGCCA +
Preference number: 3 (lower is better)
Translates to: TPSSWSPVSVCR*TVRAHSLQIWP
Trigger: TGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAGAAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp AGTGCACAGCTTTCAGATCCGAGGGGGCATCAGCTTTaGGCTTCTCTTTGGGGAGCAAAGGCTCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SAQLSDPRGHQL*ASLWGAKAQGK
Trigger: TTTTCCCTGAGCCTTTGCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCTCGGATCTGAAAGCTGTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR-3UTR CAA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAATTGACAAAAAGGGTTaGAAGCGGCTGAGCGTCTTG +
Preference number: 3 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPIDKKG*KRLSVL
Trigger: CAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAAT...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 3 (lower is better)
Translates to: ASMGALDREAEFWMRMHHLGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 3 (lower is better)
Translates to: TLKPSLILEALGCRAVDIHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 72 bp GCATGCACATCCCCAAAGGTGTCACCCAGCTGGATGTaGTTACAGCTCTGGAACTGCCTAAGCATGCATCCA +
Preference number: 3 (lower is better)
Translates to: ACTSPKVSPSWM*LQLWNCLSMHP
Trigger: TGGATGCATGCTTAGGCAGTTCCAGAGCTGTAATCACATCCAGCTGGGTGACACCTTTGGGGATGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp CCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATaGGGATGCACCATCAGTGACAGCTTTGGAACTGCA +
Preference number: 3 (lower is better)
Translates to: PWVLWIGKQSSG*GCTISDSFGTA
Trigger: TGCAGTTCCAAAGCTGTCACTGATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp ATTCGAGGAGAGGTCTGGGAAAGGCCACGCAGGCAGTaGAGGTCTTTTCCCACGTCCAATTTTATGGGACGA +
Preference number: 3 (lower is better)
Translates to: IRGEVWERPRRQ*RSFPTSNFMGR
Trigger: TCGTCCCATAAAATTGGACGTGGGAAAAGACCTTCACTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR TCA 72 bp GTCTGGGCTGCTCCCGCACCTGGTGTTTTATGCGTGTaGTATATGTGTATCCATCCTGCTTCCCTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: VWAAPAPGVLCV*YMCIHPASLPS
Trigger: TGAAGGCAGGGAAGCAGGATGGATACACATATATCACACGCATAAAACACCAGGTGCGGGAGCAGCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp TGCTTTCGTGGGGTATTGTTTACGTTTCTTTGGTGGTaGTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGC +
Preference number: 3 (lower is better)
Translates to: CFRGVLFTFLWW*SREHEEDSAPR
Trigger: GCGAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCCACGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp GAATGGCTCGGGAGAAAAGTGAACCCCTTGGTGCCCTaGTCGGACCTTAAAGGCTATGGTGGAACTCCTTTT +
Preference number: 3 (lower is better)
Translates to: EWLGRKVNPLVP*SDLKGYGGTPF
Trigger: AAAAGGAGTTCCACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TCTCCCGGATGTGCATGGGAGAGAGATGGCAGCTTCTaGACAGACAAGGATGACACAGGTTCTTTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: SPGCAWERDGSF*TDKDDTGSLLL
Trigger: AAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGCCATCAGTGACAGCTTaGGAACTGCAGACACCAAGG +
Preference number: 3 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVPSVTA*ELQTPR
Trigger: CCTTGGTGTCTGCAGTTCCAAAGCTGTCACTGATGG...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR-3UTR CAA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGATGACACAGGTTCTTaGCTCCTTTGCAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: TLREKTCLELRTFSQLENDDTGS*LLCSWD
Trigger: ATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCAAACTGTTTCCCTGTaGTGGGGCCAGCAGGAGCTA +
Preference number: 3 (lower is better)
Translates to: KGFEAAERLARLSASFQRQTVSL*WGQQEL
Trigger: TAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR-3UTR CAA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTGAGCGTCTTGCCAGGTaGTCAGCTTCATTTCAACGT +
Preference number: 3 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTERLAR*SASFQR
Trigger: ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTC...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR TCA 72 bp ATCTGTCTGCCTCTGGCACCAACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATTGCGAGTCAATTTGGG +
Preference number: 3 (lower is better)
Translates to: ICLPLAPTQQFA*TSYRLIASQFG
Trigger: CCCAAATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTGCCAGAGGCAGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 72 bp TTGCACAAAGGGCCAAGCCACTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCCCTGCATAGCCATCTG +
Preference number: 3 (lower is better)
Translates to: LHKGPSHFSRTW*DLSRLPLHSHL
Trigger: CAGATGGCTATGCAGGGGTAAACGTGACAGATCTCACCATGTCCTGGAAAAGTGGCTTGGCCCTTTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR GCA 72 bp CCTTCAAGGGAAGACTTAACTCTCCGAGAGAAAACCTaGCTGGAGCTGCGCACATTCTCACAGCTTGAGAAC +
Preference number: 3 (lower is better)
Translates to: PSREDLTLREKT*LELRTFSQLEN
Trigger: GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTCCCTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR GCA 72 bp GACGTCCTCAGGGCTCTGACTCTTTCTTGGTGGTTTTaGTCTTTAACCACACTGCCAACCCTCATCCTCTCT +
Preference number: 3 (lower is better)
Translates to: DVLRALTLSWWF*SLTTLPTLILS
Trigger: AGAGAGGATGAGGGTTGGCAGTGTGGTTAAAGAGCAAAACCACCAAGAAAGAGTCAGAGCCCTGAGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp AGCCATCTGTCTGCCTCTGGCACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACTCATTGCGAGTCAATT +
Preference number: 3 (lower is better)
Translates to: SHLSASGTNPAV*LNELQTHCESI
Trigger: AATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTGCCAGAGGCAGACAGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp CACACATCACCGTCAGCTATGGCTCTTGGGGTAAGGTaGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: HTSPSAMALGVR*EVSWIVEFSCS
Trigger: GGAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATAGCTGACGGTGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp GCTGTATGTGGGACATTCAGAACACCCAGCAGTTTGTaGAGCTCTGGACGCATCTCACAGGCAAGTTTTACA +
Preference number: 3 (lower is better)
Translates to: AVCGTFRTPSSL*SSGRISQASFT
Trigger: TGTAAAACTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTGCTGGGTGTTCTGAATGTCCCACATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp CTGCATTTCCTAAAGGCCCATTCAGGATCCGAACTATaGAACCTCATGGTTATCGGGCAAGGAATGTCTGGG +
Preference number: 3 (lower is better)
Translates to: LHFLKAHSGSEL*NLMVIGQGMSG
Trigger: CCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAATGGGCCTTTAGGAAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TGCTTGAACGAGCTACAGACTCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCACCAGGCTCTCCATTT +
Preference number: 3 (lower is better)
Translates to: CLNELQTHCESI*GWFGNSPGSPF
Trigger: AAATGGAGAGCCTGGTGAATTCCCGAACCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GGAGGCCATTTCTTTGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCAATCGGCTGAACACTTaGAAGCCTTCGCTGATACTG +
Preference number: 3 (lower is better)
Translates to: GGHFFACHDGRNAQFLLSNRLNT*KPSLIL
Trigger: CAGTATCAGCGAAGGCTTCAAAGTGTTCAGCCGATT...GCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 3 (lower is better)
Translates to: ASMGALDREAEFWMRMHHNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR TCA 72 bp GCCAGTAGCTCTGCTCAAGGGTTTATAAATGTGTTTTaGCACACAGCATCTCTCACCCTCACTGCAGGGTCA +
Preference number: 3 (lower is better)
Translates to: ASSSAQGFINVF*HTASLTLTAGS
Trigger: TGACCCTGCAGTGAGGGTGAGAGATGCTGTGTGTCAAAACACATTTATAAACCCTTGAGCAGAGCTACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp TCTTTGCTCCTTTGCAGCTGGGATGAATGTTCAAGTTaGAGCACAGTGTGGTTCCCATGGAAAGCCCAAGGT +
Preference number: 3 (lower is better)
Translates to: SLLLCSWDECSS*STVWFPWKAQG
Trigger: ACCTTGGGCTTTCCATGGGAACCACACTGTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGGAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp ATATTGGGATACCGAGTGACAGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTC +
Preference number: 3 (lower is better)
Translates to: ILGYRVTGSILY*LKFLLTFSGVV
Trigger: GACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTCACTCGGTATCCCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGACACACTGTGATTCCTTaGGGACACCACATTTTGAAC +
Preference number: 3 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGHTVIP*GHHILN
Trigger: GTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTG...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 3 (lower is better)
Translates to: ASMGALDREAEFWMRMHHPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCTTCCCAATGACAGACTaGGAGCTGGGGACATGTCAG +
Preference number: 3 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSFPMTD*ELGTCQ
Trigger: CTGACATGTCCCCAGCTCCAAGTCTGTCATTGGGAA...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR-3UTR CAA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTCATGGCTATAAAATGTaGGTCCCACCTGCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFHGYKM*VPPAGY
Trigger: GTACCCTGCAGGTGGGACCAACATTTTATAGCCATG...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp AGCCTAGGAATGTTCCAGTGTCTTGCAGAAAAGAGCTaGAGATGCACTAACCACCAAAAGATAGGAGTGGGC +
Preference number: 3 (lower is better)
Translates to: SLGMFQCLAEKS*RCTNHQKIGVG
Trigger: GCCCACTCCTATCTTTTGGTGGTTAGTGCATCTTCAGCTCTTTTCTGCAAGACACTGGAACATTCCTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR GCA 72 bp GCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTaGTCCTTTGCAGCTGGGATGAATGTTCAAGTTGAA +
Preference number: 3 (lower is better)
Translates to: AASGQTRMTQVL*SFAAGMNVQVE
Trigger: TTCAACTTGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp GAAGGTCTTTTCCCACGTCCAATTTTATGGGACGACTaGGGTTTGAAGATGGAATCTAGAAACCCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: EGLFPRPILWDD*GLKMESRNPPL
Trigger: GAGAGGAGGGTTTCTAGATTCCATCTTCAAACCCCAGTCGTCCCATAAAATTGGACGTGGGAAAAGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CCA 72 bp CCTTTGTGCGTAGCCAGAGAGTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACCATCCTCGATGTCGTA +
Preference number: 3 (lower is better)
Translates to: PLCVARESIAVV*LTVEFTILDVV
Trigger: TACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTATCGACTCTCTGGCTACGCACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp ACCAGAGAAAGACAATACTTTAAAGCCGACCTAGAGTaGTTCTTTGAACTGCAGGTTGTAATTGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: TRERQYFKADLE*FFELQVVIGCG
Trigger: CCCACACCCAATTACAACCTGCAGTTCAAAGAACCACTCTAGGTCGGCTTTAAAGTATTGTCTTTCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp CTCTGCCTATTGTTCAAGCTTTTTCTAAAGTCATGGTaGACAGTACAAGGCCAGGGTAAGAAAATCTGTGCC +
Preference number: 3 (lower is better)
Translates to: LCLLFKLFLKSW*TVQGQGKKICA
Trigger: GGCACAGATTTTCTTACCCTGGCCTTGTACTGTCCACCATGACTTTAGAAAAAGCTTGAACAATAGGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TATAAACATTCACACATCACCGTCAGCTATGGCTCTTaGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATT +
Preference number: 3 (lower is better)
Translates to: YKHSHITVSYGS*GKVGGKLDCRI
Trigger: AATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATAGCTGACGGTGATGTGTGAATGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR TCA 72 bp AAGATGAGGCATGTATTGCATTGCATAGATGCTGACTaGTTTCATGTTTTCTGTGCTGCCCTCCTGTCATAC +
Preference number: 3 (lower is better)
Translates to: KMRHVLHCIDAD*FHVFCAALLSY
Trigger: GTATGACAGGAGGGCAGCACAGAAAACATGAAATCAGTCAGCATCTATGCAATGCAATACATGCCTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR TCA 72 bp GTGGTTCGGGAATTCACCAGGCTCTCCATTTCCAGGTaGATATCTTTTGTTTCGCCAGTATCATATAAATGG +
Preference number: 3 (lower is better)
Translates to: VVREFTRLSISR*ISFVSPVSYKW
Trigger: CCATTTATATGATACTGGCGAAACAAAAGATATTCACCTGGAAATGGAGAGCCTGGTGAATTCCCGAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CCA 72 bp CTGAAACCCATTATACTTTCAATTAGATGGCAAGAATaGCAACCTCGACCAGATGGGAAAGTCAGCAAACCT +
Preference number: 3 (lower is better)
Translates to: LKPIILSIRWQE*QPRPDGKVSKP
Trigger: AGGTTTGCTGACTTTCCCATCTGGTCGAGGTTGCCATTCTTGCCATCTAATTGAAAGTATAATGGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CCA 72 bp TTTCTCTGCCTATTGTTCAAGCTTTTTCTAAAGTCATaGTGGACAGTACAAGGCCAGGGTAAGAAAATCTGT +
Preference number: 3 (lower is better)
Translates to: FLCLLFKLFLKS*WTVQGQGKKIC
Trigger: ACAGATTTTCTTACCCTGGCCTTGTACTGTCCACCATGACTTTAGAAAAAGCTTGAACAATAGGCAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR-3UTR CAA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATAGGCAAGTTTTACAAGTaGCTGAGAGAGGCCATTTTA +
Preference number: 3 (lower is better)
Translates to: YQRRKGYLFHASHKILPIGKFYK*LREAIL
Trigger: TAAAATGGCCTCTCTCAGCAACTTGTAAAACTTGCC...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGGCCGTGCTGCTCCTCTaGGTGGGAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRAVLLL*VGGPGG
Trigger: CCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGC...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGGCCTCCCGTTCTCCTTaGCCAGGGGCGGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAASRSP*PGAGGE
Trigger: CTCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGC...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGCCTCCCGTTCTCCTTaGCCAGGGGCGGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSASRSP*PGAGGE
Trigger: CTCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTGCGGTCCACAGGTGTaGGCCCGAGGCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLCGPQV*ARGCGG
Trigger: TCCGCCGCAGCCTCGGGCTCACACCTGTGGACCGCA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGTTAGCCTCGGGGGCTaGACAGCCCAGCCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLVSLGG*TAQPPR
Trigger: GCGAGGGGGCTGGGCTGTGCAGCCCCCGAGGCTAAC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGTGCTGGACAGCTCCCTaGGCTCCTCCTGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRACWTAP*APPGRC
Trigger: GCAGCGCCCAGGAGGAGCGCAGGGAGCTGTCCAGCA...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTCTCCCTGGCTCGCATaGGCTCCTCGGCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRSPWLA*APRPTP
Trigger: AGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCCTGGGGAGACCGGATaGGGCTGGTGGCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSPGETG*GWWLGR
Trigger: CCTCCCAAGCCACCAGCCCCATCCGGTCTCCCCAGG...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGTTCCAGAGTCCACCGTaGCCCCGCTGGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAFQSPP*PRWRGC
Trigger: GCACCCCCTCCAGCGGGGCCACGGTGGACTCTGGAA...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp CTGAAGGCAGGCGTGGGGAAGCTGGGCTCGGGCCCCTaGCTGCGGTCCACAGGTGTGAGCCCGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LKAGVGKLGSGP*LRSTGVSPRLR
Trigger: CCGCAGCCTCGGGCTCACACCTGTGGACCGCAGCAAGGGGCCCGAGCCCAGCTTCCCCACGCCTGCCTTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 72 bp CAGGTGGCGGGCAAGGGCGGCGGGACCACCGAGGCATaGGGCTCGGCCTCCCTGAGCTTCCTCCGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: QVAGKGGGTTEA*GSASLSFLRKV
Trigger: CACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTGCCCGCCACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGCAGGGTCACTGGCTGTaGTCGGATGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRQGHWL*SDGRVH
Trigger: GTGCACTCTCCCATCCGATCACAGCCAGTGACCCTG...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCGCGAGGACGGAGGGCTaGCCCGGGTGCCTGCCTACG +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGARTEG*PGCLPT
Trigger: CGTAGGCAGGCACCCGGGGCAGCCCTCCGTCCTCGC...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAAACMT*WSLWFP
Trigger: CGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGC...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTGCATCCTGCTCAGCTaGCTGGCCATGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSCILLS*LAMASR
Trigger: GCGGGACGCCATGGCCAGGCAGCTGAGCAGGATGCA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCTGTGGCGGGCCAGTaGCGCCCTGTTCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQAVAGQ*RPVPQP
Trigger: GGGCTGCGGAACAGGGCGGCACTGGCCCGCCACAGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRARLRVV*MPLPGQ
Trigger: CTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCG...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGGGACAGGTGGGAGTTaGGGCCCCTCTGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAGTGGS*GPSVEG
Trigger: CCCCTCAACAGAGGGGCCCCAACTCCCACCTGTCCC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCACGCCTTGCGGGGCCTaGGGGCGCCTGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRTPCGA*GRLRPA
Trigger: AGCTGGCCTCAGGCGCCCCCAGGCCCCGCAAGGCGT...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCTAGGAGGTTGGAGCTaGGCTTCTCCGGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLLGGWS*ASPGAG
Trigger: GCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAG...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGAAGGCGCTCCTCAGGTaGTTTCTCCTGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAKALLR*FLLGGG
Trigger: GCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTT...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGALGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGCACAACCCCTGCAGCTaGGATCCCGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAHNPCS*DPAQLA
Trigger: GGCTAACTGGGCGGGATCGCAGCTGCAGGGGTTGTG...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCAGGTGCCGCCGTGGCTaGTCGCACAACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPRCRRG*SHNPCS
Trigger: GCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCT...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGGACCTCTCTCTTGGTaGTTCGGTGAGGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSGPLSW*FGEAGS
Trigger: GCTGCCCGCCTCACCGAAGCACCAAGAGAGAGGTCC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGCTCCTCCTGGGCGCTaGGTAGCTCTCTGTCGGACG +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLAPPGR*VALCRT
Trigger: CGTCCGACAGAGAGCTACGCAGCGCCCAGGAGGAGC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGCGCGGGGTGGTCCCCTaGGTCATGCCATACACGCCG +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLRGVVP*VMPYTP
Trigger: CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCG...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGGCCTTGAGTCTGGGCTaGTCCCGCACCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRALSLG*SRTWCF
Trigger: AAAACACCAGGTGCGGGAGCAGCCCAGACTCAAGGC...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGTGGAAGCCCACGGGGTaGAGCATCCTCAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAWKPTG*SILKPR
Trigger: CCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCA...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGACPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTCCTGCTCAGCTGCCTaGCCATGGCGTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPSCSAA*PWRPAA
Trigger: CGCTGCGGGACGCCATGGCCAGGCAGCTGAGCAGGA...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGACGCCTTGCGGGGCCTaGGGGCGCCTGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPTPCGA*GRLRPA
Trigger: AGCTGGCCTCAGGCGCCCCCAGGCCCCGCAAGGCGT...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCCGGCGCTCCTTGCCCTaGGAGGGTGCTGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRRRSLP*EGAEDA
Trigger: GGCGTCCTCAGCACCCTCCCAGGGCAAGGAGCGCCG...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGTTCCAGAGTCCACCGTaGCCCCGCTGGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLFQSPP*PRWRGC
Trigger: GCACCCCCTCCAGCGGGGCCACGGTGGACTCTGGAA...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCCACTGCGGGACGCCTTaGAGGGGCCAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPHCGTP*RGQASA
Trigger: AGCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTG...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCTCTCCAAGGCCACTTaGGGCCTCTGCCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKLSKAT*GLCPSG
Trigger: ACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAG...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCGCCATCTGGGCCCCCTaGGTCCGACGGCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSAIWAP*VRRRGE
Trigger: CTCTCCCCGCCGTCGGACTCAGGGGGCCCAGATGGC...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTCGCACCCTGACCCCTaGCCCTGCTTTCGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLSHPDP*PCFRGV
Trigger: TACCCCACGAAAGCAGGGTCAGGGGTCAGGGTGCGA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCCTCCATGTCTCCTGTaGTGCTGGGGTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAPPCLL*CWGGHD
Trigger: GTCATGCCCACCCCAGCATCACAGGAGACATGGAGG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGGGCCGCCCTCAGGTGTaGTGGTGCGGGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPGRPQV*WCGTGL
Trigger: CAGCCCCGTCCCGCACCATCACACCTGAGGGCGGCC...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSWFGCH*LARRMP
Trigger: TGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTCCGGGTGGTTTGGATaGCACTGCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPSGWFG*HCLARR
Trigger: CCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGA...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTGCTCGCACAACCCCTaGAGCTGCGATCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQACSHNP*SCDPAQ
Trigger: CTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTCTCCCTGGCTCGCATaGGCTCCTCGGCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLSPWLA*APRPTP
Trigger: AGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTGGGGTCGTCCTTCTTaGCCATGCCTGCTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLWGRPS*PCLLRP
Trigger: GGGGCGAAGCAGGCATGGGCAAGAAGGACGACCCCA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGTCCACCTTCCAGACTaGAGGCTGCCGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSVHLPD*RLPCVL
Trigger: CAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGAC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGATQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGAGGGGGAGGTGGGATaGCTGTGGGTCCACCTGACA +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLEGEVG*LWVHLT
Trigger: TGTCAGGTGGACCCACAGCCATCCCACCTCCCCCTC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCAGTGCACGTCAGCCTaGATCTCCAGAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSQCTSA*ISRGSA
Trigger: GGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTG...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCAGTGCACGTCAGCCTaGATCTCCAGAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAQCTSA*ISRGSA
Trigger: GGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGGTGATTTCTCCTGGGTaGCGGCAGGGACAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAVISPG*RQGQVG
Trigger: TCCCACCTGTCCCTGCCGCCACCCAGGAGAAATCAC...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGGACTGGGTAGGGGATaGGACAGTGGCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLGLGRG*DSGLGG
Trigger: TCCACCGAGGCCACTGTCCCATCCCCTACCCAGTCC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCAGGCGTGGGGAAGCTaGGCTCGGGCCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRQAWGS*ARAPCC
Trigger: GCAGCAAGGGGCCCGAGCCCAGCTTCCCCACGCCTG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGTCCCTGCGCTCCTCCTaGGCGCTGCGTAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLSLRSS*ALRSSL
Trigger: CAGAGAGCTACGCAGCGCCCAGGAGGAGCGCAGGGA...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGTGGGGTGGGCATGACTaGACGCCCCCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLWGGHD*TPPSWV
Trigger: GACCCAGGATGGGGGCGTCCAGTCATGCCCACCCCA...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGGAGAATCAGCGCTGTaGCGGCCACTAGCGGCGTTA +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSGESAL*RPLAAL
Trigger: TAACGCCGCTAGTGGCCGCCACAGCGCTGATTCTCC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTCACGTGAGAACAGGTaGAGAATCAGCGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRSRENR*RISAVA
Trigger: CGCCACAGCGCTGATTCTCCACCTGTTCTCACGTGA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGAGGTGGCGGGTGCAGCTaGAAGCAGCTCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGGGGCS*KQLGPA
Trigger: TGCTGGGCCGAGCTGCTTTCAGCTGCACCCGCCACC...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCTGCGGGCTCCCTGGTaGGACAGGAGTCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPLRAPW*DRSPSF
Trigger: GAAGCTAGGACTCCTGTCTCACCAGGGAGCCCGCAG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTTGGGCTCGGCCTCCCTaGGCTTCCTCCGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLWARPP*ASSARW
Trigger: CCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCA...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCAGTTTAGTCAGCCTTaGGTCTGGGCTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSQFSQP*VWAAPA
Trigger: TGCGGGAGCAGCCCAGACTCAAGGCTGACTAAACTG...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGTCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKSSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCGGGGCAGGGCGAACCTaGCCAGGCAGGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAGAGRT*PGRQQD
Trigger: GTCCTGCTGCCTGCCTGGGCAGGTTCGCCCTGCCCC...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR GCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCATGCATCCACTGGTaGTGCATGCGGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQACIHW*CMRPLG
Trigger: CCCCAGGGGCCGCATGCAGCACCAGTGGATGCATGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCAGAGGATCCGCCGCGTaGATGACCTGCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPRGSAA*MTCWSL
Trigger: GAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCT...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTTGCTGGACAGCTCCCTaGGCTCCTCCTGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLCWTAP*APPGRC
Trigger: GCAGCGCCCAGGAGGAGCGCAGGGAGCTGTCCAGCA...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGCTGGCGCCGGAGCTaGAGCTCTGCCCTTACGACG +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGSWRRS*SSALTT
Trigger: CGTCGTAAGGGCAGAGCTGCAGCTCCGGCGCCAGCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTGCCTCTCCTCCACCTaGTGCAGCTGCCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPCLSST*CSCRWM
Trigger: CATCCAGCGGCAGCTGCAGCAGGTGGAGGAGAGGCA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCTCAGCCTGCTCCACTaGGGGACGCCTTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLSLLH*GTPWRG
Trigger: GCCCCTCCAAGGCGTCCCGCAGTGGAGCAGGCTGAG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTGGCCGAAGGCGGCTCTaGCGGGGCTGGACCGGTTTT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLGRRRL*RGWTGF
Trigger: AAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCC...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTGGAAGCCCACGGGGTaGAGCATCCTCAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPWKPTG*SILKPR
Trigger: CCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCA...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGGCGCCACTGGCCTTaGAGTTCTGTGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPWRHWP*SSVSQG
Trigger: CCCCTGGGACACAGAACTGCAAGGCCAGTGGCGCCA...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGATAACCACTGTCACCTaGGGCTCCCCACTGCACGCG +
Preference number: 4 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPITTVT*GSPLHA
Trigger: CGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTAT...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGACCCCAGAGGGGGAGGTaGGATGGCTGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGPQRGR*DGCGST
Trigger: GGTGGACCCACAGCCATCCCACCTCCCCCTCTGGGG...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCCTTTCAGAAGGGCATaGATCCGCACGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAPFRRA*IRTASF
Trigger: GAAGGAGGCCGTGCGGATCCATGCCCTTCTGAAAGG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCAGGCGTGGGGAAGCTaGGCTCGGGCCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWQAWGS*ARAPCC
Trigger: GCAGCAAGGGGCCCGAGCCCAGCTTCCCCACGCCTG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTCACGGACTTCTCCCTaGCTCGCATGCGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPSRTSP*LACAPR
Trigger: CCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGA...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCGGCGCTCCTTGCCCTaGGAGGGTGCTGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWRRSLP*EGAEDA
Trigger: GGCGTCCTCAGCACCCTCCCAGGGCAAGGAGCGCCG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGGAGCGCGCGGGGTaGTCCCCTGCGTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLERERAG*SPASCH
Trigger: ATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCGGGTCTGGTCCGGATaGCTCCTCGCTGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPRVWSG*LLAGLC
Trigger: ACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAACCTGGCAGGCGGGTCTaGTCCGGATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEPGRRV*SGWLLA
Trigger: AGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGG...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp GGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCAGGCGGATGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GARPPQIAAPGG*DATAWPGGCQQ
Trigger: CTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp TCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCT +
Preference number: 4 (lower is better)
Translates to: SSSIRSGVPLSR*AMLGSSRPFTP
Trigger: AGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGGCTGTGGGTCCACCTaGCACTGTCACGTTAATCGA +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAGCGST*HCHVNR
Trigger: TCGATTAACGTGACAGTGTCAGGTGGACCCACAGCC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGGATGGACAGAGGCTTaGGAAGGTGGAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSGWTEA*EGGVPH
Trigger: ATGAGGGACTCCACCTTCTCAAGCCTCTGTCCATCC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCCCCTGGCCCCCAAACTaGGACAAGGGCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRPWPPN*DKGEFC
Trigger: GCAGAACTCGCCCTTGTCTCAGTTTGGGGGCCAGGG...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGATGTGCGGAGGAAGGTaGTGCCCTGGCCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLMCGGR*CPGPQT
Trigger: AGTTTGGGGGCCAGGGCATCACCTTCCTCCGCACAT...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGAGGCCACGCAGGCAGTaGAGGTCTTTTCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPRPRRQ*RSFPTS
Trigger: GGACGTGGGAAAAGACCTTCACTGCCTGCGTGGCCT...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCACAGAGGCCGAGGGAGTaGCGCGCCACCCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPQRPRE*RATQPN
Trigger: GTTTGGCTGGGTGGCGCGTCACTCCCTCGGCCTCTG...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGCTCCTCCTGGGCGCTaGGTAGCTCTCTGTCGGACG +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEAPPGR*VALCRT
Trigger: CGTCCGACAGAGAGCTACGCAGCGCCCAGGAGGAGC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGGAGGCCAGCTCCATCTaGTGCATCCTGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPEASSI*CILLSC
Trigger: GCAGCTGAGCAGGATGCAGCAGATGGAGCTGGCCTC...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACAGGCCGGCGCTCCTTaGCCTGGGAGGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPAQAGAP*PGRVLR
Trigger: CCTCAGCACCCTCCCAGGGCAAGGAGCGCCGGCCTG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPPYTPC*SSEWEV
Trigger: GACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPWSPAS*HTRRAA
Trigger: AGCAGCACGGCGTGTATGGCATGACGCAGGGGACCA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTCCAGGGTCCCACCTTaGACCCTCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPSRVPP*TLLACV
Trigger: CACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGA...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCGGAGCGCCTCCGGCCTaGCCTCCAGGGAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSGAPPA*PPGKLH
Trigger: ATGCAGCTTCCCTGGAGGGCAGGCCGGAGGCGCTCC...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGTTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGALQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQAVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAATGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQCPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCTCATCTGGGCACAGTaGGGAGAGTGGGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKLIWAQ*GEWGLH
Trigger: ATGGAGGCCCCACTCTCCCCACTGTGCCCAGATGAG...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACCCCAGAGGGGGAGGTaGGATGGCTGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPPQRGR*DGCGST
Trigger: GGTGGACCCACAGCCATCCCACCTCCCCCTCTGGGG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCGCACAGGTGCCGCCGTaGCTGCTCGCACAACCCCTG +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSAQVPP*LLAQPL
Trigger: CAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGC...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGCTTCCCCCTCAGCTaGGCACGGCAAACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRCFPLS*ARQTQL
Trigger: GAGCTGCGTTTGCCGTGCCCAGCTGAGGGGGAAGCA...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTACCTGGGGAGACCGGATaGGGCTGGTGGCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLPGETG*GWWLGR
Trigger: CCTCCCAAGCCACCAGCCCCATCCGGTCTCCCCAGG...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGACAGGTGGGAGTTaGGGCCCCTCTGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPGTGGS*GPSVEG
Trigger: CCCCTCAACAGAGGGGCCCCAACTCCCACCTGTCCC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTTGGCCGGGGCAGGCTaGAAGCGTATGGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLAGAG*KRMGDW
Trigger: CCAGTCCCCCATACGCTTCCAGCCTGCCCCGGCCAA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGTGTCACTTTGGCTTTaGACAGGGAGAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSVSLWL*TGRGAS
Trigger: ACTGGCCCCTCTCCCTGTCCAAAGCCAAAGTGACAC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTGCCCAGTCTGTCCTTaGTGTCACTTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRCPVCP*CHFGFG
Trigger: TCCAAAGCCAAAGTGACACCAAGGACAGACTGGGCA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCACGGATATGAGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGCTTCCTCCGCAAGGTaGCGGGCTCCTCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LTDMSPVHVSLDLQRIRRASSAR*RAPRPG
Trigger: CCCCGGGCGAGGAGCCCGCCACCTTGCGGAGGAAGC...GCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTCATCTGGGCAGGCCTaGAAGCCCACGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRSSGQA*KPTGCS
Trigger: GCTGCACCCCGTGGGCTTCCAGGCCTGCCCAGATGA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGTCATCTGGGCAGGCCTaGAAGCCCACGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLESSGQA*KPTGCS
Trigger: GCTGCACCCCGTGGGCTTCCAGGCCTGCCCAGATGA...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp AGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGTCTGGGAAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: RAEGGSAGAGPV*WHSRRGLGKAT
Trigger: CGTGGCCTTTCCCAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp TTCTCCCTGGCTCGCATGCGCTCCTCGGCCAACTCCTaGGCTTCCGCGGACACCAAGGGCAGCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSLARMRSSANS*ASADTKGSPLF
Trigger: GAAGAGGGGGCTGCCCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGAGCGCATGCGAGCCAGGGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCCTCTGCTGAATCTGTaGATAACCCGGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKPLLNL*ITRGQS
Trigger: GCTCTGCCCCCGGGTTATTCACAGATTCAGCAGAGG...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGATAAATAGATGCACGTaGGGAGCACCGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPINRCT*GAPGSP
Trigger: GGGGCTGCCCGGTGCTCCTCACGTGCATCTATTTAT...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTTCTCACCAGCCACATaGTTCCAGGGTCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLFSPAT*FQGPTL
Trigger: CAAGGTGGGACCCTGGAATCATGTGGCTGGTGAGAA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCGATCTTCCACTGCCATaGGTTCCCGGAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPDLPLP*VPGAPA
Trigger: AGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATC...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAACTGGAAGCCCTGGGGTaGAGGGCAGTGGATATAGGG +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQLEALG*RAVDIG
Trigger: CCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAG...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGGACCTCTCTCTTGGTaGTTCGGTGAGGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEGPLSW*FGEAGS
Trigger: GCTGCCCGCCTCACCGAAGCACCAAGAGAGAGGTCC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGATCGGATGGGAGAGTaGACAGCTTTCAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGADRMGE*TAFRSE
Trigger: CTCGGATCTGAAAGCTGTGCACTCTCCCATCCGATC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCGAGGCCAGCTCCATCTaGTGCATCCTGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSREASSI*CILLSC
Trigger: GCAGCTGAGCAGGATGCAGCAGATGGAGCTGGCCTC...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGCATCCCAGCATCCACTaGAGCACTCGCGTTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLHPSIH*STRVSV
Trigger: GACGGAAACGCGAGTGCTGCAGTGGATGCTGGGATG...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGGATCGCGGCTCCGGGTaGTTTGGATGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEDRGSG*FGCHCL
Trigger: CAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATC...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCATAACCACTGTCACCTaGGGCTCCCCACTGCACGCG +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGITTVT*GSPLHA
Trigger: CGCGTGCAGTGGGGAGCCCCAGGTGACAGTGGTTAT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCACCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSIRSGVPLSRLAMLGSSVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTESWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAATTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCATGCGTGCTGACCTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSCVLTC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCA...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGCTCTTAGGGCCGTGTaGCGGGTGGGCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRALRAV*RVGALQ
Trigger: CTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAGC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAGGGACTGGGGAGAATaGACTGCGGGCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKRDWGE*TAGSRK
Trigger: TTTCCTGCTGCCCGCAGTCCATTCTCCCCAGTCCCT...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGAGAAGAGCTGATTCCTaGGGAGACCGGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPRRADS*GDRMGL
Trigger: CAGCCCCATCCGGTCTCCCCAGGAATCAGCTCTTCT...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGGAGGTGTTGAAGCTCTaGCTGCCCAGTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAEVLKL*LPSVFM
Trigger: CATGAAGACACTGGGCAGCCAGAGCTTCAACACCTC...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCCTCGGCCAACTCCTTaGCTTCCGCGGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRPRPTP*LPRTPR
Trigger: CCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGCAAGGACATCGTCGCTaGAGAGGTCTGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLQGHRR*RGLSPR
Trigger: CCGAGGACTCAGACCTCTCCAGCGACGATGTCCTTG...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAATGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTECVVFG*RADPSC
Trigger: GCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACA...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCCCTCATCACATGAGTaGTCCAGATGGTCTAGCGCC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLPSSHE*SRWSSA
Trigger: GGCGCTAGACCATCTGGACCACTCATGTGATGAGGG...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp AGTGGCGTGTTCCTTGGCACAGCTAATCCTCTCCTGTaGGGCTCTCGTACCGCCGCCGGGAAGCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGVFLGTANPLL*GSRTAAGKPAG
Trigger: GCCAGCCGGCTTCCCGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp TCTCAGTGGAGCTGGCCACGGCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCATCCTGCAGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SQWSWPRRWPVR*HLWWRHPAGVL
Trigger: AAGGACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp GAACCTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCC +
Preference number: 4 (lower is better)
Translates to: EPGVLSVELATA*ARPFASVVAPS
Trigger: GGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: LLGQGRVARLLGARPAGRSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAACGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQRSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCCGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGRSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTGCAGCCCTGCGTGCTaGCCTGCTGGCGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLCSPAC*PAGDVL
Trigger: GAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGCGGTGCACTGGTGGCTaGATCACCCAGAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWRCTGG*ITQSPS
Trigger: GGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCG...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCAAGGCGCTCCTCAGGTaGTTTCTCCTGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSKALLR*FLLGGG
Trigger: GCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCCGGAGTCCGAGGTGTTaGAGCTCTGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSRSPRC*SSGCPV
Trigger: CACTGGGCAGCCAGAGCTTCAACACCTCGGACTCCG...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTGCTCCTCGGAGCCCCTaGGAGTGGGGCGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGAPRSP*EWGVWG
Trigger: CCCCCACACGCCCCACTCTCAGGGGCTCCGAGGAGC...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGTCGCCGGGACTTCTGTaGGGACTTCTCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLSPGLL*GLLKDI
Trigger: GATGTCCTTGAGAAGTCCTCACAGAAGTCCCGGCGA...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCATAAATAGATGCACGTaGGGAGCACCGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGINRCT*GAPGSP
Trigger: GGGGCTGCCCGGTGCTCCTCACGTGCATCTATTTAT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCCTTGGCCTGTGTGGATaGGGGCCCATCCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRLGLCG*GPILKP
Trigger: AGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAG...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCACATTCTCACAGCTTaGGAACGCTTGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAHILTA*ERLTQE
Trigger: TTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTGGCGATGGCCAGTTTaGCACGGAATTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLWRWPV*HGILSD
Trigger: GTCGGAAAGAATTCCGTGGCAAACTGGCCATCGCCA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTATCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLSSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCCCTGCGTGCTGACCTaGTGGCGACGTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEPCVLT*WRRPPR
Trigger: CCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGGCTGCCCCCGGCATaGACGGAGGAGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRLPPA*TEERSV
Trigger: CACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCACCAAGGCAGAGGCTaGCCCCGGCATGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEHQGRG*PRHARR
Trigger: CCTCCGTGCATGCCGGGGGCAGCCTCTGCCTTGGTG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCCCGCAGGGCACAGGTaGCGCCGTGGCTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKPAGHR*RRGCSH
Trigger: GTGCGAGCAGCCACGGCGGCACCTGTGCCCTGCGGG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTCGCTGGTGGCTTCATaGTTCAGGGTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPSLVAS*FRVGSS
Trigger: CGAGGAGCCCACCCTGAAGCATGAAGCCACCAGCGA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCATGATCTGGGCTCGATaGAGCCGCTTAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPMIWAR*SRLSSS
Trigger: GGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCAT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRMPYTP*CSSEWE
Trigger: CTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCAT...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCGTGGAACAGGGACAATaGCTGTCTGCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGVEQGQ*LSANWG
Trigger: CCCCCAGTTGGCAGACAGGCATTGTCCCTGTTCCAC...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGACACAGCCAGGCTGGTaGGGAACCGTGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQATQPGW*GTVRKE
Trigger: TTCCTTTCTCACGGTTCCGCACCAGCCTGGCTGTGT...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGTCCACCTTCCAGACTaGAGGCTGCCGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPVHLPD*RLPCVL
Trigger: CAGCACACACGGCAGCCTGCAGTCTGGAAGGTGGAC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCCCCGTCCATCTCTGGCCGGTAATGAACCCGGTGATGAGCACTCGGGGAAAAAGCACTTCACGGCTCTaGCGCCCACCGGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPVHLWPVMNPVMSTRGKSTSRL*RPPDGP
Trigger: GGGGCCGTCCGGTGGGCGGCAGAGCCGTGAAGTGCT...TTTTCCCCGAGTGCTCATCACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCACACCGGGAGGCAAGGTaGCCTGATTCTGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPHREAR*PDSELP
Trigger: CGGCAGCTCAGAATCAGGGCACCTTGCCTCCCGGTG...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGGTGCTGCCCGTACGCTaGTGTGCATCCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPVLPVR*CASPKP
Trigger: GGGCTTTGGGGATGCACAGCAGCGTACGGGCAGCAC...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCCAAGTCAATACCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAPSQYL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGTATTGACTTGG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTAAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TILDVVGVGREAQGGGAVSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTGCGTGCTGACCTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLCVLTC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTGCGTGCTGACCTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESCVLTC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGGTCAGCACGCA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGCTGCATGCGGCCCCTaGGGCACACATTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNAACGP*GTHFQS
Trigger: GGACTGAAAATGTGTGCCCCAGGGGCCGCATGCAGC...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWACMTC*SLWFPA
Trigger: AGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGC...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAAGCACCAGTGTCCCCTaGGTCCCCATCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLSTSVP*VPILCC
Trigger: GCAGCAGAGGATGGGGACCCAGGGGACACTGGTGCT...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGGACTGGGTAGGGGATaGGACAGTGGCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWGLGRG*DSGLGG
Trigger: TCCACCGAGGCCACTGTCCCATCCCCTACCCAGTCC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCATTGGCCGGGGCAGGCTaGAAGCGTATGGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPALAGAG*KRMGDW
Trigger: CCAGTCCCCCATACGCTTCCAGCCTGCCCCGGCCAA...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGTTGGCCAGGGGCGGGTaGCGAGGCTTCTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQLARGG*RGFSGR
Trigger: GCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAA...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCCTTCTTCTAGGAGGTTaGAGCTGGGCTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGLLLGG*SWASPG
Trigger: CCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAG...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCACTTCCACAGGGACTTaGGTTTGGCGGCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPTSTGT*VWRRLL
Trigger: AAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGCACGCCGGGTCAGCTTaGCATTCAGTTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPHAGSA*HSVPPP
Trigger: CGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTG...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATGTGTGGTGTTCGGCTaGAGGGCAGACCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPCVVFG*RADPSC
Trigger: GCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGSRNSH*EGESGS
Trigger: GCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACCTGGCAGGCGGGTCTaGTCCGGATGGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPPGRRV*SGWLLA
Trigger: AGCGAGGAGCCATCCGGACCAGACCCGCCTGCCAGG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp CGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTaGAGAGGCACCAGCCTGCATCCCAGCATCCACTGC +
Preference number: 4 (lower is better)
Translates to: RLRKEGRESLIC*RGTSLHPSIHC
Trigger: GCAGTGGATGCTGGGATGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACAGCAGCGCCACCAGTaGGTCTCTCTGCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPAQQRHQ*VSLLHH
Trigger: GTGGTGGAGCAGAGAGACTCACTGGTGGCGCTGCTG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGGCTGTGGGTCCACCTaGCACTGTCACGTTAATCGA +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGGCGST*HCHVNR
Trigger: TCGATTAACGTGACAGTGTCAGGTGGACCCACAGCC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACTGCGGGCTCCCTGGTaGGACAGGAGTCCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPALRAPW*DRSPSF
Trigger: GAAGCTAGGACTCCTGTCTCACCAGGGAGCCCGCAG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGTGCGGTCCACAGGTGTaGGCCCGAGGCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQCGPQV*ARGCGG
Trigger: TCCGCCGCAGCCTCGGGCTCACACCTGTGGACCGCA...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCACTGGAGCCCTCGGATaGAGTGAAAGAGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGTGALG*SERAIW
Trigger: CCAGATGGCTCTTTCACTTCATCCGAGGGCTCCAGT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTTTCTCACTGGGAGGGTaGGAGTGGCAGCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLFSLGG*EWQLCC
Trigger: ACAGCAGAGCTGCCACTCTCACCCTCCCAGTGAGAA...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGATGTGCGGAGGAAGGTaGTGCCCTGGCCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWMCGGR*CPGPQT
Trigger: AGTTTGGGGGCCAGGGCATCACCTTCCTCCGCACAT...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAACAGTTTAGTCAGCCTTaGGTCTGGGCTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEQFSQP*VWAAPA
Trigger: TGCGGGAGCAGCCCAGACTCAAGGCTGACTAAACTG...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGATCTTCCACTGCCATaGGTTCCCGGAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPDLPLP*VPGAPA
Trigger: AGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAACTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTELGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCTCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRRPAALRRLSAKARVHLCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGCATCCACTGGTGCTaGATGCGGCCCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFCIHWC*MRPLGH
Trigger: GTGCCCCAGGGGCCGCATGCAGCACCAGTGGATGCA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGCATGCATCCACTGGTaGTGCATGCGGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRACIHW*CMRPLG
Trigger: CCCCAGGGGCCGCATGCAGCACCAGTGGATGCATGC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGCACCAAGGCAGAGGCTaGCCCCGGCATGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYREHQGRG*PRHARR
Trigger: CCTCCGTGCATGCCGGGGGCAGCCTCTGCCTTGGTG...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGAGCTGGAGTGCAGTGGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGAGVQW*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACCACTGCACTCCAGC...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGGCGAGGACGGAGGGCTaGCCCGGGTGCCTGCCTACG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGARTEG*PGCLPT
Trigger: CGTAGGCAGGCACCCGGGGCAGCCCTCCGTCCTCGC...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGTGCTGAGGACGCCTTaGGGGGCCTGGGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTVLRTP*GAWGRL
Trigger: CAGGCGCCCCCAGGCCCCGCAAGGCGTCCTCAGCAC...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACAGGCCGGCGCTCCTTaGCCTGGGAGGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPQAGAP*PGRVLR
Trigger: CCTCAGCACCCTCCCAGGGCAAGGAGCGCCGGCCTG...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCGTGACGACCTCTTCTTaGTCTTCCCACTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRVTTSS*SSHWSP
Trigger: AGGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCAC...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTACGGGAGTCGCTGATCTaGTTGAGAGGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLRESLI*LRGTSL
Trigger: CAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCG...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGGGCTATGTGCTGACTaGTTTGATGGACAAGCACCC +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQAGLCAD*FDGQAP
Trigger: GGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCCC...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGGTTATCTCCCGGATGTaGATGGGAGAGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLVISRM*MGERWQ
Trigger: CTGCCATCTCTCTCCCATGCACATCCGGGAGATAAC...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCCTCCGAGAGAAAACCTaGCTGGAGCTGCGCACATTC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRLREKT*LELRTF
Trigger: GAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAG...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSATQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGCACCCGGGCGCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: GPGRVGRTRCRCGSRTRAHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...CGCCCGGGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCTTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGLKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGGGCTCCCCCTCATCTaGGCACAGTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEGLPLI*AQWGEW
Trigger: CCACTCTCCCCACTGTGCCCAGATGAGGGGGAGCCC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGAGGTGGGATGGCTGTaGGTCCACCTGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEEVGWL*VHLTLS
Trigger: TGACAGTGTCAGGTGGACCCACAGCCATCCCACCTC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGAGAGGTGGGATGGCTGTaGGTCCACCTGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGEVGWL*VHLTLS
Trigger: TGACAGTGTCAGGTGGACCCACAGCCATCCCACCTC...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGGAGGTGGGATGGCTGTaGGTCCACCTGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEEVGWL*VHLTLS
Trigger: TGACAGTGTCAGGTGGACCCACAGCCATCCCACCTC...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCAACTCGGAACTACTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPATRNYC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGTAGTTCCGAGT...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAAGCGTATGGGGGACTaGGTAGGGGATGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEKRMGD*VGDGTV
Trigger: CACTGTCCCATCCCCTACCCAGTCCCCCATACGCTT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGAGGCTTGAGAAGGTaGAGTCCCTCATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLERGLRR*SPSSWG
Trigger: CCCCCAGGATGAGGGACTCCACCTTCTCAAGCCTCT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCCAGTGTCTTCATGTTaGAGGAGCTCCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRPVSSC*RSSRAG
Trigger: GCCTGCACGGGAGCTCCTCCAACATGAAGACACTGG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGCTTCCTCCGCAAGGTaGCGGGCTCCTCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGASSAR*RAPRPG
Trigger: CCCCGGGCGAGGAGCCCGCCACCTTGCGGAGGAAGC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGGGACCTCCTCGCTGGTaGCTTCATGCTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWGPPRW*LHASGW
Trigger: CCACCCTGAAGCATGAAGCCACCAGCGAGGAGGTCC...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGGACCTCCTCGCTGGTaGCTTCATGCTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWGPPRW*LHASGW
Trigger: CCACCCTGAAGCATGAAGCCACCAGCGAGGAGGTCC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCACAGGGACTTGGGTTTaGCGGCGGCTTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGTGTWV*RRLLLG
Trigger: TCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGTCGGAGAAGCTCAGCTaGCGCCGGAGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRSEKLS*RRSCSS
Trigger: AGAGCTGCAGCTCCGGCGCCAGCTGAGCTTCTCCGA...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAATTAGGGTCCAGTGTGTaGTGTTCGGCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTELGSSV*CSAGGQ
Trigger: CTGCCCTCCAGCCGAACACCACACACTGGACCCTAA...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGACAGTGTGGTTCCCATaGAAAGCCCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLTVWFP*KAQGQH
Trigger: GTGCTGACCTTGGGCTTTCCATGGGAACCACACTGT...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTCGGGAGCAGAAGGCTaGGGCGCAGGCCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGSGAEG*GAGLRL
Trigger: GAGCCGCAGGCCTGCGCCCCAGCCTTCTGCTCCCGA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTACCTGAAGGCATCATCTaGGCAGGCCTGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLPEGII*AGLEAH
Trigger: GTGGGCTTCCAGGCCTGCCCAGATGATGCCTTCAGG...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTCCTCAGTCTTAAGGTaGTCTTCCACTGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPSSVLR*SSTAMR
Trigger: ACGCATGGCAGTGGAAGATCACCTTAAGACTGAGGA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESRLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGTGCAGCCCTGCGTGCTaGCCTGCTGGCGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWCSPAC*PAGDVL
Trigger: GAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCA...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGAGGGTGTCTGACATaGGGGCTGAGGTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRGCLT*GLRWRV
Trigger: CACCCGCCACCTCAGCCCTCATGTCAGACACCCTCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACTCTTGGTGCTTCGGTaGGGCGGGCAGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPLLVLR*GGQLLL
Trigger: GAGGAGAAGCTGCCCGCCTCACCGAAGCACCAAGAG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCCTCTTGGTGCTTCGGTaGGGCGGGCAGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSLLVLR*GGQLLL
Trigger: GAGGAGAAGCTGCCCGCCTCACCGAAGCACCAAGAG...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTGGGCTCGGCCTCCCTaGGCTTCCTCCGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKWARPP*ASSARW
Trigger: CCACCTTGCGGAGGAAGCTCAGGGAGGCCGAGCCCA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGGCACCCGGGCGCAGGTaGTCAGTTCCTCTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWAPGRR*SVPLVK
Trigger: CTTTACTAGAGGAACTGATCACCTGCGCCCGGGTGC...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTTGGCCTGTGTGGATaGGGGCCCATCCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPLGLCG*GPILKP
Trigger: AGGTTTCAGGATGGGCCCTCATCCACACAGGCCAAG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAAGTGGAACTCCCCTCTaGTTTGCACCAGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPSGTPL*FAPAPP
Trigger: CGGAGGTGCTGGTGCAAATCAGAGGGGAGTTCCACT...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGGTGCGGGACGGGGCTaGGGGACAGCACTTCACGGC +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGGAGRG*GTALHG
Trigger: GCCGTGAAGTGCTGTCCCTCAGCCCCGTCCCGCACC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCTCCCGGAGCTCCTGCTaGAGTCGACTCTGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSSRSSC*SRLCRS
Trigger: AGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGA...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTAAGGTGATCTTCCACTaGCATGCGTTCCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLKVIFH*HAFPEL
Trigger: GAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTT...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCGGGTTCATGGTCTCATaGTTCCTCTCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGGFMVS*FLSSML
Trigger: CAGCATGGAGGAGAGGAAGCATGAGACCATGAACCC...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLLGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCCCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSPVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000495076.5
CDS-3UTR GCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTAGCCCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGSPVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSASSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTGCATCCACTGGTGCTaGATGCGGCCCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCCIHWC*MRPLGH
Trigger: GTGCCCCAGGGGCCGCATGCAGCACCAGTGGATGCA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAGGTGCCGCCGTGGCTaGTCGCACAACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKRCRRG*SHNPCS
Trigger: GCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTATGGGTCCCCATCCTCTaGTGCCTCCCCTTCTATCTC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLWVPIL*CLPFYL
Trigger: GAGATAGAAGGGGAGGCAGCAGAGGATGGGGACCCA...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCACCACAGCAAGGGGGCTaGCCAGTCTGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPAPQQGG*PVCPWC
Trigger: ACACCAAGGACAGACTGGGCAGCCCCCTTGCTGTGG...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTCCCCTCTTCTGTGGCTaGAGCGTCCCCTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGPLFCG*SVPSRA
Trigger: TGCTCTGGAGGGGACGCTGCAGCCACAGAAGAGGGG...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAATAATTCAGGAGCCTaGCCGCACCTCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGNNSGA*PHLHVS
Trigger: GGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGGGCTATGTGCTGACTaGTTTGATGGACAAGCACCC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGGLCAD*FDGQAP
Trigger: GGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCCC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGCTCAGCCTGCTCCACTaGGGGACGCCTTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQLSLLH*GTPWRG
Trigger: GCCCCTCCAAGGCGTCCCGCAGTGGAGCAGGCTGAG...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGTTATCTCCCGGATGTaGATGGGAGAGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGVISRM*MGERWQ
Trigger: CTGCCATCTCTCTCCCATGCACATCCGGGAGATAAC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGACACTGGGCTCTCCTaGTACGTCTGGCCACTTACA +
Preference number: 4 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEDTGLS*YVWPLT
Trigger: TGTAAGTGGCCAGACGTAGCAGGAGAGCCCAGTGTC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGTTCCAGACTGCAGGCTaGCGTGTGTGCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWFQTAG*RVCCGG
Trigger: TCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAA...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGCTCCGAGAGAAAACCTaGCTGGAGCTGCGCACATTC +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLELREKT*LELRTF
Trigger: GAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAG...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGATCTCTGCCTCATACTaGGGTGTCCCTCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLISASY*GVPRRR
Trigger: CCGGCGCCGAGGGACACCGCAGTATGAGGCAGAGAT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTELGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTECPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGAGGCAGCAGGACGGCTaGCTGGCCCCACGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRRQQDG*LAPRSC
Trigger: ACAAGAGCGTGGGGCCAGCCAGCCGTCCTGCTGCCT...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGCACAGGTGCCGCCGTaGCTGCTCGCACAACCCCTG +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKAQVPP*LLAQPL
Trigger: CAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGTCTGTTGAGGGGCTGTaGACTGGAATGAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPSVEGL*TGMNRR
Trigger: TCTTCTGTTCATTCCAGTCCACAGCCCCTCAACAGA...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCAGGGGGCATCAGCTTTaGGCTTCTCTTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRRGHQL*ASLWGA
Trigger: TGCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCT...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGTGTCACTTTGGCTTTaGACAGGGAGAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPVSLWL*TGRGAS
Trigger: ACTGGCCCCTCTCCCTGTCCAAAGCCAAAGTGACAC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCAGAGGCTTGAGAAGGTaGAGTCCCTCATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSRGLRR*SPSSWG
Trigger: CCCCCAGGATGAGGGACTCCACCTTCTCAAGCCTCT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTACTTCTTCTAGGAGGTTaGAGCTGGGCTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLLLLGG*SWASPG
Trigger: CCCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAG...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCGCTGGAGGGGGTGCTaGGGCAGGACTTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKRWRGC*GRTCRR
Trigger: CCGACGACAAGTCCTGCCCCAGCACCCCCTCCAGCG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTTGTTTACGTTTCTTTaGTGGTGCTCCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSLFTFL*WCSREH
Trigger: ATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCAGCGGCCCAGGCATTTaGCCACTTAGGGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSSGPGI*PLRVQC
Trigger: ACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCACAGTGTGGTTCCCATaGAAAGCCCAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGTVWFP*KAQGQH
Trigger: GTGCTGACCTTGGGCTTTCCATGGGAACCACACTGT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTGCATGGGAGAGAGATaGCAGCTTCTGGACAGACAA +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQACMGER*QLLDRQ
Trigger: TTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp GCCTCATCCACAGCAAGGGGGCTGCCCAGTCTGTCCTaGGTGTCACTTTGGCTTTGGACAGGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSTARGLPSLS*VSLWLWTGRGA
Trigger: GGCCCCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGACAGACTGGGCAGCCCCCTTGCTGTGGATGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCAGGCCGTTCACGCCTaGACCTGGGGTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEQAVHA*TWGSLS
Trigger: ACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCTCTCCAAGGCCACTTaGGGCCTCTGCCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALSKAT*GLCPSG
Trigger: ACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTAGAGGGTGTCTGACATaGGGGCTGAGGTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPRGCLT*GLRWRV
Trigger: CACCCGCCACCTCAGCCCTCATGTCAGACACCCTCT...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCGGCTGTGGACTGGAATaGACAGAAGAGCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: QELQGPKAALPGLDRFCGGCGLE*TEELIP
Trigger: AGGAATCAGCTCTTCTGTTCATTCCAGTCCACAGCC...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGCCATCTGGGCCCCCTaGGTCCGACGGCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLAIWAP*VRRRGE
Trigger: CTCTCCCCGCCGTCGGACTCAGGGGGCCCAGATGGC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGGCCGTGCTGCTCCTCTaGGTGGGAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRAVLLL*VGGPGG
Trigger: CCCACCTGGACCTCCCACTCAGAGGAGCAGCACGGC...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACCTCCATGTCTCCTGTaGTGCTGGGGTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPPPCLL*CWGGHD
Trigger: GTCATGCCCACCCCAGCATCACAGGAGACATGGAGG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGTCTAGCGCCAGGGTaGGGCAGGCACCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENGLAPG*GRHRVE
Trigger: CTCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTATTCTCACCAGCCACATaGTTCCAGGGTCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLFSPAT*FQGPTL
Trigger: CAAGGTGGGACCCTGGAATCATGTGGCTGGTGAGAA...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCCCCTTTATGTCCCCATaGAGATCCGGCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSPFMSP*RSGTRQ
Trigger: CTGCCTTGTGCCGGATCTTCATGGGGACATAAAGGG...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGCCAGGGACAGAGGCCTaGAGGCATCATCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMPGTEA*RHHLGR
Trigger: CCTGCCCAGATGATGCCTTCAGGCCTCTGTCCCTGG...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTAGGCTAGCAGCAGAGTaGGCTCACCGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFRLAAE*AHREAR
Trigger: CCTTGCCTCCCGGTGAGCTCACTCTGCTGCTAGCCT...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCATGGCGTTCTTCTCCTaGACTAGCTTGAACCACTCC +
Preference number: 4 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRMAFFS*TSLNHS
Trigger: GGAGTGGTTCAAGCTAGTGCAGGAGAAGAACGCCAT...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTCCGGGTGGTTTGGATaGCACTGCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGSGWFG*HCLARR
Trigger: CCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGTCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKSVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCCCTGCGTGCTGACCTaGTGGCGACGTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHPCVLT*WRRPPR
Trigger: CCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTGCTCGCACAACCCCTaGAGCTGCGATCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGCSHNP*SCDPAQ
Trigger: CTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCCCGCAGGGCACAGGTaGCGCCGTGGCTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQPAGHR*RRGCSH
Trigger: GTGCGAGCAGCCACGGCGGCACCTGTGCCCTGCGGG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAAGCTGGCGCCGGAGCTaGAGCTCTGCCCTTACGACG +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPSWRRS*SSALTT
Trigger: CGTCGTAAGGGCAGAGCTGCAGCTCCGGCGCCAGCT...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCGCGGGGTGGTCCCCTaGGTCATGCCATACACGCCG +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTRGVVP*VMPYTP
Trigger: CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCG...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCAGTGGAACAGGGACAATaGCTGTCTGCCAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPAVEQGQ*LSANWG
Trigger: CCCCCAGTTGGCAGACAGGCATTGTCCCTGTTCCAC...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGGCCGAAGGCGGCTCTaGCGGGGCTGGACCGGTTTT +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGGRRRL*RGWTGF
Trigger: AAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGGCAGGCCTGCGGCTCTaGGGCGCCTCTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVAGLRL*GASLQR
Trigger: CCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGC...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGTGCAGTAGCAGAAGCTaGGTTCACCTGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPCSSRS*VHLAWL
Trigger: CAGCCAAGCCAGGTGAACGCAGCTTCTGCTACTGCA...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTATTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSIRSGVPLSRLAMLGSSGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTETQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQASGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCTTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSALKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGTTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWLKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTERLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAAGGGACTGGGGAGAATaGACTGCGGGCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSRDWGE*TAGSRK
Trigger: TTTCCTGCTGCCCGCAGTCCATTCTCCCCAGTCCCT...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGGGCCCGGTGCACTGGTaGCTGAATCACCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRGPVHW*LNHPES
Trigger: GGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCC...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCGCTGCATGCGGCCCCTaGGGCACACATTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFAACGP*GTHFQS
Trigger: GGACTGAAAATGTGTGCCCCAGGGGCCGCATGCAGC...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCCTCCATGGGTGCTCTaGATAGGGAAGCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNPPWVL*IGKQSS
Trigger: AGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGGGGCTCCCCCTCATCTaGGCACAGTGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWGLPLI*AQWGEW
Trigger: CCACTCTCCCCACTGTGCCCAGATGAGGGGGAGCCC...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGAGGGGGAGGTGGGATaGCTGTGGGTCCACCTGACA +
Preference number: 4 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPEGEVG*LWVHLT
Trigger: TGTCAGGTGGACCCACAGCCATCCCACCTCCCCCTC...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCCCCAGAGGGGGAGGTaGGATGGCTGTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVPQRGR*DGCGST
Trigger: GGTGGACCCACAGCCATCCCACCTCCCCCTCTGGGG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGTCATTCTCATCCAATaGGGCTCCGGAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPVILIQ*GSGSRG
Trigger: TCCTCTGCTTCCGGAGCCCCATTGGATGAGAATGAC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGTCCTGCTCAGCTGCCTaGCCATGGCGTCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTSCSAA*PWRPAA
Trigger: CGCTGCGGGACGCCATGGCCAGGCAGCTGAGCAGGA...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGACTTCCACAGGGACTTaGGTTTGGCGGCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWTSTGT*VWRRLL
Trigger: AAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGT...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGAGGGAGCGCGCGGGGTaGTCCCCTGCGTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVRERAG*SPASCH
Trigger: ATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCT...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGACTCGCGTTTCCGTCTaGGTGAATCTTAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPTRVSV*VNLRLG
Trigger: TCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGT...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCACTGCGGGACGCCTTaGAGGGGCCAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGHCGTP*RGQASA
Trigger: AGCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCTCTCCTGCTACGTCTaGCCACTTACAGCAGATCCC +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWLSCYV*PLTADP
Trigger: GGGATCTGCTGTAAGTGGCCAGACGTAGCAGGAGAG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTACAGGGAAGCTGCATGTaGACCTCCACGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLQGSCM*TSTVFS
Trigger: GCTGAATACCGTGGAGGTCCACATGCAGCTTCCCTG...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTTTGGCTGGGTTCTCATaGCTCCCAGGGCACACCGCC +
Preference number: 4 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFLAGFS*LPGHTA
Trigger: GGCGGTGTGCCCTGGGAGCCATGAGAACCCAGCCAA...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTACCAGCCCTGCCTCCTaGGACGTGGGTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSTSPAS*DVGLGR
Trigger: CCTCCCTAGACCCACGTCCCAGGAGGCAGGGCTGGT...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp TGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTaGGACAGCATGGCAGCCTCCAGGTCCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WVGAQDQLRLKP*DSMAASRSLSS
Trigger: GGAGGACAAGGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCCGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSARSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGTACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTERSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTATGCAGCCCTGCGTGCTaGCCTGCTGGCGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLCSPAC*PAGDVL
Trigger: GAGGACGTCGCCAGCAGGTCAGCACGCAGGGCTGCA...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCCTCTGCTGAATCTGTaGATAACCCGGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLPLLNL*ITRGQS
Trigger: GCTCTGCCCCCGGGTTATTCACAGATTCAGCAGAGG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCAGTGATTCTCCTGTGTaGGCCACCGTGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFSDSPV*ATVPGL
Trigger: AAGGCCAGGCACGGTGGCTCACACAGGAGAATCACT...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTTCCTCCTCCCTCCCAGGTTCAAGTaGTTCTCCTGTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SAHQGRSFSSVAPRSFLLPPRFK*FSCVSH
Trigger: GTGGCTCACACAGGAGAATCACTTGAACCTGGGAGG...GAGGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGCACCCGGGCGCAGGTaGTCAGTTCCTCTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPAPGRR*SVPLVK
Trigger: CTTTACTAGAGGAACTGATCACCTGCGCCCGGGTGC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGAGTCCTAGCTTCTGGCAGGGTCACTGGCTGTGATCGGATGGGAGAGTGCACATGGTCAAAATCGGCCTaGGGATGGCCGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GVLASGRVTGCDRMGECTWSKSA*GWPPGT
Trigger: TGTCCCTGGCGGCCATCCTCAGGCCGATTTTGACCA...TGTGCACTCTCCCATCCGATCACAGCCAGTGACCCTGCCAGAAGCTAGGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGCAAGCAGCTGGCACATaGAAAAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPQAAGT*KRSPEG
Trigger: ACCCTCTGGACTCCTTTTTCATGTGCCAGCTGCTTG...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATCCCGGAGCTCCTGCTaGAGTCGACTCTGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPSRSSC*SRLCRS
Trigger: AGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCGTTCCCGGAGCTCCTaGTGCAGTCGACTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVRSRSS*CSRLCR
Trigger: CCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGATCTCATTGAGAATCTaGTTCTCTTCTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPISLRI*FSSDSS
Trigger: GGAGCTGTCAGAAGAGAAGCAGATTCTCAATGAGAT...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGLGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGCTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWLGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTELGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLERSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTACCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACCCTGCGTGCTGACCTaGTGGCGACGTCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLPCVLT*WRRPPR
Trigger: CCGAGGAGGACGTCGCCAGCAGGTCAGCACGCAGGG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTCATGTTTTCTGTGCTaGCCTCCTGTCATACCTGCC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNSCFLC*PPVIPA
Trigger: GGCAGGTATGACAGGAGGGCAGCACAGAAAACATGA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCATGGGTCCCCATCCTCTaGTGCCTCCCCTTCTATCTC +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPWVPIL*CLPFYL
Trigger: GAGATAGAAGGGGAGGCAGCAGAGGATGGGGACCCA...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCCCCTCTTCTGTGGCTaGAGCGTCCCCTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKPLFCG*SVPSRA
Trigger: TGCTCTGGAGGGGACGCTGCAGCCACAGAAGAGGGG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTGCTGAGGACGCCTTaGGGGGCCTGGGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPVLRTP*GAWGRL
Trigger: CAGGCGCCCCCAGGCCCCGCAAGGCGTCCTCAGCAC...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTCGCTTAAGCTCCTCCTaGTTGGCCTGTCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGRLSSS*LACLRA
Trigger: AGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGGTAGGACGCACCAGATaGCGCTGTGGCTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRVGRTR*RCGSRT
Trigger: GGTGCGGGAGCCACAGCGGCATCTGGTGCGTCCTAC...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGTGTGCTGTGGAGGATaGCACAGTGTTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWVCCGG*HSVKAD
Trigger: GTCAGCCTTAACACTGTGGCATCCTCCACAGCACAC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCAGGCCTGCGGCTCTaGGGCGCCTCTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENAGLRL*GASLQR
Trigger: CCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGGATCGCGGCTCCGGGTaGTTTGGATGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQDRGSG*FGCHCL
Trigger: CAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATC...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGATCCGTTCATTCTCTTaGTCCTCAGGAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: RQRLPPACTEERSVRQPKIRSFS*SSGGCI
Trigger: TATACAGCCTCCTGAGGACCAAGAGAATGAACGGAT...CTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGCCAAGTCAATACCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEPSQYL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGTATTGACTTGG...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGCCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCTACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAATACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYREVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGLGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGGGACTGGGGAGAATaGACTGCGGGCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRDWGE*TAGSRK
Trigger: TTTCCTGCTGCCCGCAGTCCATTCTCCCCAGTCCCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTAGCAGGACGGCTGGCTaGCCCCACGCTCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAASRTAG*PHALVS
Trigger: TGACACAAGAGCGTGGGGCCAGCCAGCCGTCCTGCT...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CCA 90 bp TCCATCCTCCTGTCTGTCAGAGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGGGCCCGGTGCACTGGTaGCTGAATCACCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SILLSVRVLTRVGLSPLWGPVHW*LNHPES
Trigger: GGACTCTGGGTGATTCAGCCACCAGTGCACCGGGCC...CCACAGAGGAGAAAGACCGACCCTGGTGAGCACTCTGACAGACAGGAGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TCCATCCTCCTGTCTGTCAGAGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGGCACAGTGGGGAGAGTaGGGCCTCCATGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SILLSVRVLTRVGLSPLWAQWGE*GLHGCS
Trigger: AGAGCACCCATGGAGGCCCCACTCTCCCCACTGTGC...CCACAGAGGAGAAAGACCGACCCTGGTGAGCACTCTGACAGACAGGAGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTCACTGCAGGGTCAGTaGAGAGAGAGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFSLQGQ*RERVGS
Trigger: GGAGCCCACTCTCTCTCTCCACTGACCCTGCAGTGA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCCAGGCTGGAGTGCAGTaGTGCAGTGGCATGATCTCG +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFQAGVQ*CSGMIS
Trigger: CGAGATCATGCCACTGCACCACTGCACTCCAGCCTG...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGAGGGACCTCTCTCTTaGTGCTTCGGTGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPEGPLS*CFGEAG
Trigger: GCCCGCCTCACCGAAGCACCAAGAGAGAGGTCCCTC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTTCAGGTGATTTCTCCTaGGTGGCGGCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGSGDFS*VAAGTG
Trigger: ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGA...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAGAGGTGTTGAAGCTCTaGCTGCCCAGTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLEVLKL*LPSVFM
Trigger: CATGAAGACACTGGGCAGCCAGAGCTTCAACACCTC...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTTGGCCAGGGGCGGGTaGCGAGGCTTCTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCLARGG*RGFSGR
Trigger: GCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGACTCGCGTTTCCGTCTaGGTGAATCTTAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWTRVSV*VNLRLG
Trigger: TCCCAGCCTAAGATTCACCCAGACGGAAACGCGAGT...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCCCACGTCCAATTTTATaGGACGACTGGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGPRPIL*DDWGLK
Trigger: CTTCAAACCCCAGTCGTCCCATAAAATTGGACGTGG...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAGAGAGAAAACCTGCCTaGAGCTGCGCACATTCTCAC +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLERKPA*SCAHSH
Trigger: GTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTC...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTTCCTCCTCCCATGTTGGCCAGGCTaGTCTCGAACTTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAHQGRSFSSVAPRSFLLPCWPG*SRTFGL
Trigger: GAGGCCAAAAGTTCGAGACCAGCCTGGCCAACATGG...GAGGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp CCGGATGGCTCCTCGCTGGGCTATGTGCTGACTGCTTaGATGGACAAGCACCCCACCCCGATTAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PDGSSLGYVLTA*MDKHPTPISSV
Trigger: CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCCCAGCGAGGAGCCATCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp AAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTaGCACACGCCGGGTCAGCTTGGCATTCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KLLLLGLSPSCL*HTPGQLGIQFL
Trigger: GAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 72 bp TGCCTGGCCAGGCGGATGCCAACAGAAAATGGAGCGTaGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CLARRMPTENGA*GGSSGPVKAEA
Trigger: GGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNTQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: VSLLWGQQELQGPKAALPFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSASFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACAC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLREASLH*EETETH
Trigger: GTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGCGGAGGAGCGGTCTGTaGGGCAGCCCAAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYRERRSGL*GSPRMN
Trigger: ATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCG...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTAGTGATTCTCCTGTGTaGGCCACCGTGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCSDSPV*ATVPGL
Trigger: AAGGCCAGGCACGGTGGCTCACACAGGAGAATCACT...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCCTCCCAGGTTCAAGTaGTTCTCCTGTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLPPRFK*FSCVSH
Trigger: GTGGCTCACACAGGAGAATCACTTGAACCTGGGAGG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCGGCTGTGGACTGGAATaGACAGAAGAGCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSGCGLE*TEELIP
Trigger: AGGAATCAGCTCTTCTGTTCATTCCAGTCCACAGCC...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCCAGGTCGCTCCGTCTaGGGGCCTCATCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTPGRSV*GPHPQQ
Trigger: TTGCTGTGGATGAGGCCCTCAGACGGAGCGACCTGG...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAAGGCCACGCAGGCAGTaGAGGTCTTTTCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPRPRRQ*RSFPTS
Trigger: GGACGTGGGAAAAGACCTTCACTGCCTGCGTGGCCT...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGTGCCTGGCCACACCTaGGCTTTTCTGAAACTTTTC +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPVPGHT*AFLKLF
Trigger: GAAAAGTTTCAGAAAAGCTCAGGTGTGGCCAGGCAC...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGCGGTTACCATGGGCCTaGGCTAATGACTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPRLPWA*ANDCSL
Trigger: TAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCG...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACATACGGCTCCCCAGTGTaGGGCTCCCGTGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTYGSPV*GSRGSQ
Trigger: CTGAGAACCACGGGAGCCTCACACTGGGGAGCCGTA...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGCATCCCCAAAGCCCTaGCCTGGAGTACGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAASPKP*PGVRLP
Trigger: GGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTCACGGATATGAGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCAGCTTGAACCACTCCTaGATCAGCTTGGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LTDMSPVHVSLDLQRIRRSLNHS*ISLGSS
Trigger: GGACGACCCCAAGCTGATGCAGGAGTGGTTCAAGCT...GCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPCSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSACHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCATGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GVPLSRLAMLGSSRPFTPVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...AGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGAGCCCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTSPVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSARSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGTCAGCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWSAVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGCTGA...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR GCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCTGGAAGCCCTGGGGTaGAGGGCAGTGGATATAGGG +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALEALG*RAVDIG
Trigger: CCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAATTCAAGCAATTCTCATaGCTTACCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQFKQFS*LTLPSS
Trigger: GCTACTTGGGAGGGTAAGGCATGAGAATTGCTTGAA...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTGTTAGCCTCGGGGGCTaGACAGCCCAGCCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRVSLGG*TAQPPR
Trigger: GCGAGGGGGCTGGGCTGTGCAGCCCCCGAGGCTAAC...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCGTGAAGAATTTCTCCTaGAGGCTTGAGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRVKNFS*RLESSV
Trigger: GACTGAGGACTCAAGCCTGCAGGAGAAATTCTTCAC...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTCGCTGGTGGCTTCATaGTTCAGGGTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKSLVAS*FRVGSS
Trigger: CGAGGAGCCCACCCTGAAGCATGAAGCCACCAGCGA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGGGCCTGTCTCCGAGCTaGCTTTTGCACACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRGLSPS*LLHTPG
Trigger: ACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCC...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTGCCTCTCCTCCACCTaGTGCAGCTGCCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVCLSST*CSCRWM
Trigger: CATCCAGCGGCAGCTGCAGCAGGTGGAGGAGAGGCA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTGGGGTCGTCCTTCTTaGCCATGCCTGCTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRWGRPS*PCLLRP
Trigger: GGGGCGAAGCAGGCATGGGCAAGAAGGACGACCCCA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCAAATAATTCAGGAGCCTaGCCGCACCTCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPANNSGA*PHLHVS
Trigger: GGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATT...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTCTGCGGCGCCTCTCTaGAAAGGCTCGGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRSAAPL*KGSGPP
Trigger: AGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGCCCGTACGCTGCTGTaGATCCCCAAAGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGARTLL*IPKALT
Trigger: GGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTCAGAAAATGGAGCGTTaGGTGGGAGCTCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGQKMER*VGAQDQ
Trigger: CTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTG...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGCGGCTCCGGGTGGTTTaGATGCCACTGCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWRLRVV*MPLPGQ
Trigger: CTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCG...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLLQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTERATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TCCTTCTTCATGGAGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: SFFMEPCLRMPMDCAGAFMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...GAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRLKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGCCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGCPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTAGCAGGACGGCTGGCTaGCCCCACGCTCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGSRTAG*PHALVS
Trigger: TGACACAAGAGCGTGGGGCCAGCCAGCCGTCCTGCT...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTAGTGCAGTGGTGCAGTaGCATGATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCSAVVQ*HDLGSL
Trigger: CAGCGAGCCGAGATCATGCCACTGCACCACTGCACT...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTACAGGCTGGAGTGTACTaGTGTGATCTCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: TILDVVGVGREAQGGGAVQAGVY*CDLRSL
Trigger: CAGTGATCTGAGATCACACCAGTACACTCCAGCCTG...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGACCGGATGGGGCTGGTaGCTTGGGAGGGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGTGWGW*LGRDLS
Trigger: AGAGAGGTCCCTCCCAAGCCACCAGCCCCATCCGGT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGGTGATTTCTCCTGGGTaGCGGCAGGGACAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQVISPG*RQGQVG
Trigger: TCCCACCTGTCCCTGCCGCCACCCAGGAGAAATCAC...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCTCGCCTTCCGGCTTTaGCAGGCCCAGCCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGLAFRL*QAQPFG
Trigger: CCCAAAAGGCTGGGCCTGCCAAAGCCGGAAGGCGAG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCAGCCCCCTCTTCTGTaGCTGCAGCGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENQPPLL*LQRPLQ
Trigger: CTGGAGGGGACGCTGCAGCCACAGAAGAGGGGGCTG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTCAGCTGCCTGGCCATaGCGTCCCGCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCSAAWP*RPAAPG
Trigger: GCCAGGCGCTGCGGGACGCCATGGCCAGGCAGCTGA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTAGGAGGTTGGAGCTaGGCTTCTCCGGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQLGGWS*ASPGAG
Trigger: GCCGGCCCCCGGAGAAGCCCAGCTCCAACCTCCTAG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCGCTGGAGGGGGTGCTaGGGCAGGACTTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQRWRGC*GRTCRR
Trigger: CCGACGACAAGTCCTGCCCCAGCACCCCCTCCAGCG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTGGGGTGGGCATGACTaGACGCCCCCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENWGGHD*TPPSWV
Trigger: GACCCAGGATGGGGGCGTCCAGTCATGCCCACCCCA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCACCTTGCACCCTCTTaGCCTGTGTGGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGHLAPS*PVWMRA
Trigger: GGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACCCCGATTAGCTCAGTaGCTTGATGAGCTGTACACA +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPPRLAQ*LDELYT
Trigger: TGTGTACAGCTCATCAAGCCACTGAGCTAATCGGGG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCGCTGGACCGGTTTTGTaGCATTCGAGGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSAGPVL*HSRRGL
Trigger: CAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGC...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCGGCTCTGCCGGGGCTaGACCGGTTTTGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVRLCRG*TGFVAF
Trigger: GAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTGAAACACAGCCCTGCTaGCCCCCTCTTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSETQPC*PPLATV
Trigger: CACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTC...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTCGGGCAAGGAATGTCTaGGGACAGGGGTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSRARNV*GQGSGN
Trigger: GTTGCCTGACCCCTGTCCCCAGACATTCCTTGCCCG...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTCCCAAAGCCCTGACCTaGAGTACGGCTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSPKALT*STAPQC
Trigger: ACACTGGGGAGCCGTACTCCAGGTCAGGGCTTTGGG...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTGTGCCCGGCTCTCCGTaGTGTCCTGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATVPGSP*CPGSSS
Trigger: GCTGCTGCTGCCAGGACACCACGGAGAGCCGGGCAC...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCCTGTGGGAGGTACCTaGCGCCACTGGCCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVPVGGT*RHWPCS
Trigger: ACTGCAAGGCCAGTGGCGCCAGGTACCTCCCACAGG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAATTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCTTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCAGGCCGTTCACGCCTaGACCTGGGGTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVQAVHA*TWGSLS
Trigger: ACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTCACCCAGCTGGATGTaGTTACAGCTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESSPSWM*LQLWNC
Trigger: GCAGTTCCAGAGCTGTAATCACATCCAGCTGGGTGA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTCCTTGCTACATTACATaGACTTGCTGCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESPCYIT*TCCPTA
Trigger: GGCAGTGGGGCAGCAAGTTCATGTAATGTAGCAAGG...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCCTTGCTACATTACATaGACTTGCTGCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEPCYIT*TCCPTA
Trigger: GGCAGTGGGGCAGCAAGTTCATGTAATGTAGCAAGG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCCACTGCGCCCAGCATaGATGCTAGTTTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNPLRPA*MLVLKS
Trigger: AGATTTTAAAACTAGCATTCATGCTGGGCGCAGTGG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCAGGGTCACTGGCTGTaGTCGGATGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGQGHWL*SDGRVH
Trigger: GTGCACTCTCCCATCCGATCACAGCCAGTGACCCTG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGAGCAGGACGGGGGCGTaGAGAATTTCTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGSRTGA*RISPAG
Trigger: GCCTGCAGGAGAAATTCTTCACGCCCCCGTCCTGCT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGCTCCTCGGAGCCCCTaGGAGTGGGGCGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEAPRSP*EWGVWG
Trigger: CCCCCACACGCCCCACTCTCAGGGGCTCCGAGGAGC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAGGCGCACTGTGGTTCTaGCGGGGAGCAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPGALWF*RGAASL
Trigger: GAGGGAAGCTGCTCCCCGTCAGAACCACAGTGCGCC...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGTGCTCCAGGGAGCATaGAGAAGACAGTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGVLQGA*RRQCPS
Trigger: CGAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCAC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAGGTCTAGCGCCAGGGTaGGGCAGGCACCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTGLAPG*GRHRVE
Trigger: CTCCACCCGGTGCCTGCCTCACCCTGGCGCTAGACC...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTTCTCACTGGGAGGGTaGGAGTGGCAGCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKFSLGG*EWQLCC
Trigger: ACAGCAGAGCTGCCACTCTCACCCTCCCAGTGAGAA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTGCGTTTCCGTCTGGGTaGATCTTAGGCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGAFPSG*ILGWEE
Trigger: CTCCTCCCAGCCTAAGATTCACCCAGACGGAAACGC...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGCCTTTGCAGCTGGGATaGATGTTCAAGTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWPLQLG*MFKLKH
Trigger: GTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGG...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGACCTTTGCCTCACGTaGGAACAGGTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPDLCLT*EQVENQ
Trigger: CTGATTCTCCACCTGTTCTCACGTGAGGCAAAGGTC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGGGTTCATGGTCTCATaGTTCCTCTCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRGFMVS*FLSSML
Trigger: CAGCATGGAGGAGAGGAAGCATGAGACCATGAACCC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTGGCGATGGCCAGTTTaGCACGGAATTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLWRWPV*HGILSD
Trigger: GTCGGAAAGAATTCCGTGGCAAACTGGCCATCGCCA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSATNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGCGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACATCAGCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTSAVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGCTGA...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTCTGCCCCTCGGGTTTaGAGCCTGTGTTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCSAPRV*SLCFCP
Trigger: AGGACAGAAACACAGGCTGCAAACCCGAGGGGCAGA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGATCTCTCACCCTCACTaGAGGGTCAGTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLISHPH*RVSGER
Trigger: TCTCTCTCCACTGACCCTGCAGTGAGGGTGAGAGAT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPAACMT*WSLWFP
Trigger: CGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGC...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTGGTCCCCTGCGTCATaGCATACACGCCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGWSPAS*HTRRAA
Trigger: AGCAGCACGGCGTGTATGGCATGACGCAGGGGACCA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCGACAAGGGCGAGTTCTaGAGAGCCGGAATTCTCACT +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSDKGEF*RAGILT
Trigger: AGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTC...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCGGGAGTCGCTGATCTaGTTGAGAGGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTRESLI*LRGTSL
Trigger: CAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCG...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAATGACACAGGTTCTTTaGTCCTTTGCAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPMTQVL*SFAAGM
Trigger: CATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCAT...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCAAACCTGCCTGGAGCTaGGCACATTCTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSKPAWS*AHSHSL
Trigger: CAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTT...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGCCTTGAGTCTGGGCTaGTCCCGCACCTGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPALSLG*SRTWCF
Trigger: AAAACACCAGGTGCGGGAGCAGCCCAGACTCAAGGC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGATAATAAGGGCACGTaGAGTAGCAGAAGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPDNKGT*SSRSCV
Trigger: AACGCAGCTTCTGCTACTGCACGTGCCCTTATTATC...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTCACGGATATGAGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCACTCGTAGCGCACCATaGCGTTCTTCTCCTGCACTA +
Preference number: 4 (lower is better)
Translates to: LTDMSPVHVSLDLQRIRRTRSAP*RSSPAL
Trigger: TAGTGCAGGAGAAGAACGCCATGGTGCGCTACGAGT...GCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTTGGATGCCACTGCCTaGCCAGGCGGATGCCAACAG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGLDATA*PGGCQQ
Trigger: CTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRLQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPNSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCATCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTGGGCTCCTCCTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SSIRSGVPLSRLAMLGSSFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCACAGCCAGCAAGCGGCCCAGGCATTTGGCCACTTAGGGTCCAGTGTGTGGTACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: GHSQQAAQAFGHLGSSVWYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...CCACACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCTTGCTGGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQASIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPSIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGCTCTTAGGGCCGTGTaGCGGGTGGGCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLALRAV*RVGALQ
Trigger: CTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAGC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIDGPVH*WLNHPE
Trigger: CTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTC...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTAGTGCAGTGGTGCAGTaGCATGATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAASAVVQ*HDLGSL
Trigger: CAGCGAGCCGAGATCATGCCACTGCACCACTGCACT...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACACCGGATGGGGCTGGTaGCTTGGGAGGGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENTGWGW*LGRDLS
Trigger: AGAGAGGTCCCTCCCAAGCCACCAGCCCCATCCGGT...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCTCGCCTTCCGGCTTTaGCAGGCCCAGCCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENLAFRL*QAQPFG
Trigger: CCCAAAAGGCTGGGCCTGCCAAAGCCGGAAGGCGAG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCTCCCTGCGCTCCTCCTaGGCGCTGCGTAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLSLRSS*ALRSSL
Trigger: CAGAGAGCTACGCAGCGCCCAGGAGGAGCGCAGGGA...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTCACGGACTTCTCCCTaGCTCGCATGCGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENSRTSP*LACAPR
Trigger: CCGAGGAGCGCATGCGAGCCAGGGAGAAGTCCGTGA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATCAGCTGCCTGGCCATaGCGTCCCGCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTSAAWP*RPAAPG
Trigger: GCCAGGCGCTGCGGGACGCCATGGCCAGGCAGCTGA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCACGCCGGGTCAGCTTaGCATTCAGTTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGHAGSA*HSVPPP
Trigger: CGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGCTCTGCTGTTGGCCTaGCCCAAAACAGAACGGAAA +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPALLLA*PKTERK
Trigger: TTTCCGTTCTGTTTTGGGCCAGGCCAACAGCAGAGC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTTCGGGAGCAGAAGGCTaGGGCGCAGGCCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSSGAEG*GAGLRL
Trigger: GAGCCGCAGGCCTGCGCCCCAGCCTTCTGCTCCCGA...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTGGAAGTGAGGCTACCTaGGGTTCTCTCAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFGSEAT*GSLSGA
Trigger: AGCTCCACTGAGAGAACCCCAGGTAGCCTCACTTCC...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTCCCCGTCCATCTCTGGCCGGTAATGAACCCGGTGATGAGCACTCGGGGAAAATTCCTAGTCTGCTCTTaGGGCCCTTTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVHLWPVMNPVMSTRGKFLVCS*GPFLGV
Trigger: CACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAA...TTTTCCCCGAGTGCTCATCACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACACTAATCCTCTCCTGTTaGGCTCTCGTACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTLILSC*ALVPPP
Trigger: CGGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAG...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp CGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAATTaGCATAATAATTCAGGAGCCTGCCCGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: RLEGRPLLRPPN*HNNSGACPHLH
Trigger: ATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCAAATTAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp AAGGCGGGCAGTAGACAGGCAGCAGTGGCGTGTTCCTaGGCACAGCTAATCCTCTCCTGTTGGGCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: KAGSRQAAVACS*AQLILSCWALV
Trigger: TACGAGAGCCCAACAGGAGAGGATTAGCTGTGCCAAGGAACACGCCACTGCTGCCTGTCTACTGCCCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp AGCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTCGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SMCRCLPGSAGTPSSWSPRSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...AGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGTACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLRYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGAGGAGTCCTCACTaGCTAGAAGATGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFWRSPH*LEDEAK
Trigger: CTTAGCCTCATCTTCTAGTCAGTGAGGACTCCTCCA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGTGGAGGAGTCCTCACTaGCTAGAAGATGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALWRSPH*LEDEAK
Trigger: CTTAGCCTCATCTTCTAGTCAGTGAGGACTCCTCCA...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCACTTTCCTTCCCAATaGCAGACTTGGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRHFPSQ*QTWSWG
Trigger: TCCCCAGCTCCAAGTCTGTCATTGGGAAGGAAAGTG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATCTCTCTCACGGATATaGGTCCAGTGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPSLSRI*VQCTSA
Trigger: GGCTGACGTGCACTGGACTCATATCCGTGAGAGAGA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGGATGGACAGAGGCTTaGGAAGGTGGAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPGWTEA*EGGVPH
Trigger: ATGAGGGACTCCACCTTCTCAAGCCTCTGTCCATCC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCCGGAGTCCGAGGTGTTaGAGCTCTGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLRSPRC*SSGCPV
Trigger: CACTGGGCAGCCAGAGCTTCAACACCTCGGACTCCG...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCACGGATATGAGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCCTGGACAGACAAGGATaGCACAGGTTCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTDMSPVHVSLDLQRIRRLDRQG*HRFFAP
Trigger: AGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAG...GCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGCTTGCAGAAAAGAGCTaGAGATGCACTAACCACCAA +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPLAEKS*RCTNHQ
Trigger: TTGGTGGTTAGTGCATCTTCAGCTCTTTTCTGCAAG...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGACCAGTGAGTCTCTCTaGTCCACCACCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKTSESL*STTSSI
Trigger: GATGCTGGAGGTGGTGGAGCAGAGAGACTCACTGGT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTGGGTTCATGGTCTCATaGTTCCTCTCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCGFMVS*FLSSML
Trigger: CAGCATGGAGGAGAGGAAGCATGAGACCATGAACCC...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTGGCGATGGCCAGTTTaGCACGGAATTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCWRWPV*HGILSD
Trigger: GTCGGAAAGAATTCCGTGGCAAACTGGCCATCGCCA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGLGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGCATACCTGCCATAAATaGCAGGGGTTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALHTCHK*QGLAFL
Trigger: CAGGAAGGCTAACCCCTGGCATTTATGGCAGGTATG...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGGTGATCTCAGATCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWVISDH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGATCTGAGATCAC...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTGCATCCTGCTCAGCTaGCTGGCCATGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPCILLS*LAMASR
Trigger: GCGGGACGCCATGGCCAGGCAGCTGAGCAGGATGCA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAGGCCTGTCTCCGAGCTaGCTTTTGCACACGCCGGGT +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPGLSPS*LLHTPG
Trigger: ACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCC...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTCTGCGGCGCCTCTCTaGAAAGGCTCGGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQSAAPL*KGSGPP
Trigger: AGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGCCCTCCAGGGAAGCTaGATGTGGACCTCCACGGTA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESALQGS*MWTSTV
Trigger: TACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTAACTCCCCTCTGATTTaGACCAGCACCTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSNSPLI*TSTSDR
Trigger: CCTGTCGGAGGTGCTGGTGCAAATCAGAGGGGAGTT...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACAACAGAAACACAGCCCTaGTGGCCCCCTCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTTETQP*WPPLAT
Trigger: TGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGT...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: HSGESGASMGALDREAEFVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCCAAGTCAATACCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLPSQYL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGTATTGACTTGG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000414725.6
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TCCTTCTTCATGGAGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFFMEPCLRMPMDCAGAFYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...GAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTCCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACCCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVLGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAAGACCCAGTCTCTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTRPSLC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGAGACTGGGTCT...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGGACGGCCCGGTGCACTaGTGGCTGAATCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVDGPVH*WLNHPE
Trigger: CTCTGGGTGATTCAGCCACCAGTGCACCGGGCCGTC...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGGGAAGCAGAGTTCTaGATGAGGATGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEREAEF*MRMHHQ
Trigger: CTGATGGTGCATCCTCATCCAGAACTCTGCTTCCCT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGACCTGCTGGAGCCTCTaGTTCCCGGCTTCACTGGAC +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWTCWSL*FPASLD
Trigger: GTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGAGCACCAGTGTCCCCTaGGTCCCCATCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQSTSVP*VPILCC
Trigger: GCAGCAGAGGATGGGGACCCAGGGGACACTGGTGCT...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCACCTCGGCCAACTCCTTaGCTTCCGCGGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPPRPTP*LPRTPR
Trigger: CCTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGG...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCGTCCCGCAGCGCCTaGCTCTTCACGGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSASRSA*LFTDFS
Trigger: GGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACGC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCGCGTCCCGCAGCGCCTaGCTCTTCACGGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCASRSA*LFTDFS
Trigger: GGAGAAGTCCGTGAAGAGCCAGGCGCTGCGGGACGC...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGAGGACCTCCTCGCTaGTGGCTTCATGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRRGPPR*WLHASG
Trigger: CCCTGAAGCATGAAGCCACCAGCGAGGAGGTCCTCT...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCAAGGACATCGTCGCTaGAGAGGTCTGAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGQGHRR*RGLSPR
Trigger: CCGAGGACTCAGACCTCTCCAGCGACGATGTCCTTG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTGCCGCTGGATGATCTaGGCTCGATGCAGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVCRWMI*ARCSRL
Trigger: TAAGCGGCTGCATCGAGCCCAGATCATCCAGCGGCA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGCCGCTGGATGATCTaGGCTCGATGCAGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGCRWMI*ARCSRL
Trigger: TAAGCGGCTGCATCGAGCCCAGATCATCCAGCGGCA...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTTAGGGTCCAGTGTGTaGTGTTCGGCTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVLGSSV*CSAGGQ
Trigger: CTGCCCTCCAGCCGAACACCACACACTGGACCCTAA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGHEWSR*SSARVR
Trigger: CCTCACCCTGGCGCTAGACCATCTGGACCACTCATG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCATGAGTGGTCCAGATaGTCTAGCGCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVHEWSR*SSARVR
Trigger: CCTCACCCTGGCGCTAGACCATCTGGACCACTCATG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGAGCCGGAATTCTCACTaGGAGGGTGAGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVSRNSH*EGESGS
Trigger: GCTGCCACTCTCACCCTCCCAGTGAGAATTCCGGCT...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGCCCTCTTGGCCTGTGTaGATGAGGGCCCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRPSWPV*MRAHPE
Trigger: TTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGG...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATGTACACAGCCAGGCTaGTGCGGAACCGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPCTQPG*CGTVRK
Trigger: CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCCGGCTCTGCCGGGGCTaGACCGGTTTTGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLRLCRG*TGFVAF
Trigger: GAATGCCACAAAACCGGTCCAGCCCCGGCAGAGCCG...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTAGTGTGAGGCTCCCGTaGTTCTCAGAACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFSVRLP*FSEPGT
Trigger: TGTTCCTGGTTCTGAGAACCACGGGAGCCTCACACT...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCTCTTCAAATTTGGGTCGGCGTAGTCCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPVSVCRWTVRAHSLQIWVGVVL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGACTACGCCGAC...CCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp CAGCAGATCCCTAGGCCACACTCCTTCCAAGCCACTTaGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QQIPRPHSFQAT*QTVSLLWGQQE
Trigger: CTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp CAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTaGGACCTCATGACAAGCCCAGTGGCCAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QGSGHESGTGEG*DLMTSPVAKGS
Trigger: TGACCCCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp CTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCGATAGCAGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSRQGSHCRSLP*CVARESIAVVW
Trigger: CCACACTACTGCTATCGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp TTCTTGTACCCGGAGAAGACGGACTTCCACAGGGACTaGGGTTTGGCGGCGGCTTCTTCTAGGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLYPEKTDFHRD*GLAAASSRRLE
Trigger: CTCCAACCTCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 72 bp GTGCTGGGGCAGGACTTGTCGTCGGCCTTCTTCTTCTaGTCCTTCTTGTACCCGGAGAAGACGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLGQDLSSAFFF*SFLYPEKTDFH
Trigger: GTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CCTGCGTCATGCCATACACGCCGTGCTGCTCCTCTGAGTGGGAGGTCCAGGTGGCTTGGAATTCCACATTaGCGTGGATTTCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: PASCHTRRAAPLSGRSRWLGIPH*RGFQCL
Trigger: TAGGCATTGAAATCCACGTCAATGTGGAATTCCAAG...CCACCTGGACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCATGACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTETQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLTQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCTTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYRESFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGCAGGCCGTTCACGCCTaGACCTGGGGTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVQAVHA*TWGSLS
Trigger: ACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTG...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACAC +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHEASLH*EETETH
Trigger: GTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTC...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTATCACCCAGCTGGATGTaGTTACAGCTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVSPSWM*LQLWNC
Trigger: GCAGTTCCAGAGCTGTAATCACATCCAGCTGGGTGA...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTGCATAGATGCTGACTaGTTTCATGTTTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNCIDAD*FHVFCA
Trigger: AGCACAGAAAACATGAAATCAGTCAGCATCTATGCA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCCAGGTCGCTCCGTCTaGGGGCCTCATCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRPGRSV*GPHPQQ
Trigger: TTGCTGTGGATGAGGCCCTCAGACGGAGCGACCTGG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGGCGCACTGTGGTTCTaGCGGGGAGCAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSGALWF*RGAASL
Trigger: GAGGGAAGCTGCTCCCCGTCAGAACCACAGTGCGCC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCAGATGAATGTTCAAGTTaGAGCACAGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PSEGRAGVADLLERHQPADECSS*STVWFP
Trigger: TGGGAACCACACTGTGCTTCAACTTGAACATTCATC...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGGACCTTTGCCTCACGTaGGAACAGGTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQDLCLT*EQVENQ
Trigger: CTGATTCTCCACCTGTTCTCACGTGAGGCAAAGGTC...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCAGCTTGAGAACGCTTaGCGCAGGAAGTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGQLENA*RRKSPE
Trigger: CTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCTTGGTGTTTTATGCGTGTaGTATATGTGTATCCATCCT +
Preference number: 4 (lower is better)
Translates to: FLPMPASPRSAFSTATPLGVLCV*YMCIHP
Trigger: AGGATGGATACACATATATCACACGCATAAAACACC...AAGGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCCCAGGGACAGAGGCCTaGAGGCATCATCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSPGTEA*RHHLGR
Trigger: CCTGCCCAGATGATGCCTTCAGGCCTCTGTCCCTGG...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAGATGGGAGCAGTGTCTaGGCGCCTGCGAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGDGSSV*APASSC
Trigger: ACAGGAGCTCGCAGGCGCTCAGACACTGCTCCCATC...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACACGTTCCCGGAGCTCCTaGTGCAGTCGACTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTRSRSS*CSRLCR
Trigger: CCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACG...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCCTGGCCAGGCGGATaGCAACAGAAAATGGAGCGT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENAWPGG*QQKMER
Trigger: ACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTGGTTTGGATGCCACTaGCTGGCCAGGCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQWFGCH*LARRMP
Trigger: TGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGTGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWCSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTTCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGSVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAATTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTETNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TGCCCGTACGCTGCTGTGCATCCCCAAAGCCCTGACCTGGAGTACGGCTCCCCAGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: CPYAAVHPQSPDLEYGSPVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...TGGGGAGCCGTACTCCAGGTCAGGGCTTTGGGGATGCACAGCAGCGTACGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAAGCCCTGTCTCCGTATaGCGATGGACTGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTSPVSV*RWTVRA
Trigger: CGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRRSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACACCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTPCPAR*SGCARP
Trigger: AGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGG...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTCCCTCCTGTCATACCTaGCATAAATGCCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCPSCHT*HKCQGL
Trigger: TAACCCCTGGCATTTATGGCAGGTATGACAGGAGGG...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTAGCTGGAGTGCAGTGGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLAGVQW*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACCACTGCACTCCAGC...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCACAACCCCTGCAGCTaGGATCCCGCCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRHNPCS*DPAQLA
Trigger: GGCTAACTGGGCGGGATCGCAGCTGCAGGGGTTGTG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCGCTTAAGCTCCTCCTaGTTGGCCTGTCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENRLSSS*LACLRA
Trigger: AGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGATGATCTGGGCTCGATaGAGCCGCTTAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGMIWAR*SRLSSS
Trigger: GGAGGAGCTTAAGCGGCTGCATCGAGCCCAGATCAT...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCCATACACGCCGTGCTaGTCCTCTGAGTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQPYTPC*SSEWEV
Trigger: GACCTCCCACTCAGAGGAGCAGCACGGCGTGTATGG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTATGCCATACACGCCGTaGTGCTCCTCTGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESMPYTP*CSSEWE
Trigger: CTCCCACTCAGAGGAGCAGCACGGCGTGTATGGCAT...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACACCGGCACAAGGCAGGTaGCCGTCGCCTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTPAQGR*PSPSEG
Trigger: TCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGG...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACACCGGCACAAGGCAGGTaGCCGTCGCCTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTPAQGR*PSPSEG
Trigger: TCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGG...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGCCTTCCAAGCCACTTTaGAAACTGTTTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRPSKPL*KLFPCC
Trigger: ACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGG...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGTTCCAGACTGCAGGCTaGCGTGTGTGCTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWFQTAG*RVCCGG
Trigger: TCCTCCACAGCACACACGGCAGCCTGCAGTCTGGAA...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCATATGTGTATCCATCCTaGTTCCCTGCCTTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPYVYPS*FPAFKG
Trigger: TCCCTTGAAGGCAGGGAAGCAGGATGGATACACATA...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGCCCTCCAGGGAAGCTaGATGTGGACCTCCACGGTA +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLALQGS*MWTSTV
Trigger: TACCGTGGAGGTCCACATGCAGCTTCCCTGGAGGGC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGGAGCGCCTCCGGCCTaGCCTCCAGGGAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEGAPPA*PPGKLH
Trigger: ATGCAGCTTCCCTGGAGGGCAGGCCGGAGGCGCTCC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTATGTTGCTTTGGAGGTaGTGGCTCATGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGMLLWR*WLMPLA
Trigger: GGCCAAGGGCATGAGCCAGCACCTCCAAAGCAACAT...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTCAGTGTCTGAGCGCCTaGGAGCTCCTGTCTACCTAC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAQCLSA*ELLSTY
Trigger: GTAGGTAGACAGGAGCTCGCAGGCGCTCAGACACTG...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTCCTTACAGGCGTGCTaGCCGTACGCTGCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRASLQAC*PYAAVH
Trigger: ATGCACAGCAGCGTACGGGCAGCACGCCTGTAAGGA...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTGTCACGTTAATCTCTaGCTCATACTGCGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRCHVNL*LILRCP
Trigger: GGGACACCGCAGTATGAGGCAGAGATTAACGTGACA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGCAGAAAATGGAGCGTTaGGTGGGAGCTCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRQKMER*VGAQDQ
Trigger: CTGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTG...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLENSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTTCCTCCTCGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: SAHQGRSFSSVAPRSFLLGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...GAGGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAATCCGTTCATTCTCTTaGTCCTCAGGAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSIRSFS*SSGGCI
Trigger: TATACAGCCTCCTGAGGACCAAGAGAATGAACGGAT...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPTQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTAATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: QRLPPACTEERSVRQPKNSIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTCGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GACAGGGTCGATACTGTACTGGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: DRVDTVLAEVLTHILRGGVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...ACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTACTCGGAACTACTGCTaGCGACGTCCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPTRNYC*RRPPRR
Trigger: GCGCCGAGGAGGACGTCGCCAGCAGTAGTTCCGAGT...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGCCTTTCAGAAGGGCATaGATCCGCACGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWPFRRA*IRTASF
Trigger: GAAGGAGGCCGTGCGGATCCATGCCCTTCTGAAAGG...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTGCTTCCCCCTCAGCTaGGCACGGCAAACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPCFPLS*ARQTQL
Trigger: GAGCTGCGTTTGCCGTGCCCAGCTGAGGGGGAAGCA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCCAGTGTCTTCATGTTaGAGGAGCTCCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENPVSSC*RSSRAG
Trigger: GCCTGCACGGGAGCTCCTCCAACATGAAGACACTGG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACAGAGGACCTCCTCGCTaGTGGCTTCATGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENRGPPR*WLHASG
Trigger: CCCTGAAGCATGAAGCCACCAGCGAGGAGGTCCTCT...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGACAGGGACTTGGGTTTaGCGGCGGCTTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTTGTWV*RRLLLG
Trigger: TCCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTTCGGAGAAGCTCAGCTaGCGCCGGAGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRSEKLS*RRSCSS
Trigger: AGAGCTGCAGCTCCGGCGCCAGCTGAGCTTCTCCGA...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGCCCTCATCACATGAGTaGTCCAGATGGTCTAGCGCC +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVPSSHE*SRWSSA
Trigger: GGCGCTAGACCATCTGGACCACTCATGTGATGAGGG...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCACCTTGCACCCTCTTaGCCTGTGTGGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQHLAPS*PVWMRA
Trigger: GGCCCTCATCCACACAGGCCAAGAGGGTGCAAGGTG...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTGTACACAGCCAGGCTaGTGCGGAACCGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGCTQPG*CGTVRK
Trigger: CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTAGAGATGGCAGCTTCTaGACAGACAAGGATGACACA +
Preference number: 4 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGRDGSF*TDKDDT
Trigger: TGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCT...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGATTTTATGGGACGACTaGGGTTTGAAGATGGAATCT +
Preference number: 4 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEILWDD*GLKMES
Trigger: AGATTCCATCTTCAAACCCCAGTCGTCCCATAAAAT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGCTGGACCGGTTTTGTaGCATTCGAGGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGAGPVL*HSRRGL
Trigger: CAGACCTCTCCTCGAATGCCACAAAACCGGTCCAGC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACACTTTGCCACCCAAGCTaGGGGACAGTGCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTLCHPS*GTVPVI
Trigger: AATGACAGGCACTGTCCCCCAGCTTGGGTGGCAAAG...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTCTCCCCGTCCATCTCTaGCCGGTAATGAACCCGGTG +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATLPVHL*PVMNPV
Trigger: CACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGTAGACAGGCAGCAGTaGCGTGTTCCTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAVDRQQ*RVPWHS
Trigger: GCTGTGCCAAGGAACACGCCACTGCTGCCTGTCTAC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACAGACAGAAACACAGCCCTGCTGGCCCCCTCTTGCCACAGTGACCCTGGGCCGAAAAGCACGACAACTTaGTTTCACAGTCAACGGCAA +
Preference number: 4 (lower is better)
Translates to: TDRNTALLAPSCHSDPGPKSTTT*FHSQRQ
Trigger: TTGCCGTTGACTGTGAAACCAAGTTGTCGTGCTTTT...CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAGGGCTGTGTTTCTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGGTACCTGGCGCCACTaGCCTTGCAGTTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLGTWRH*PCSSVS
Trigger: GGACACAGAACTGCAAGGCCAGTGGCGCCAGGTACC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 72 bp CGCACCTGGCTTGGCCGGAGGAAGTTGACGTTGATATaGGGATACCGAGTGACAGGGTCGATACTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RTWLGRRKLTLI*GYRVTGSILYW
Trigger: CCAGTACAGTATCGACCCTGTCACTCGGTATCCCAATATCAACGTCAACTTCCTCCGGCCAAGCCAGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTRSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CGCTTAAGCTCCTCCTGCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGCTTGGAATTCCACATTaGCGTGGATTTCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: RLSSSCLACLRAAFCTRRLGIPH*RGFQCL
Trigger: TAGGCATTGAAATCCACGTCAATGTGGAATTCCAAG...CCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSRLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTAGCAGGACGGGGGCGTaGAGAATTTCTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPSRTGA*RISPAG
Trigger: GCCTGCAGGAGAAATTCTTCACGCCCCCGTCCTGCT...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGCGTTTCCGTCTGGGTaGATCTTAGGCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLAFPSG*ILGWEE
Trigger: CTCCTCCCAGCCTAAGATTCACCCAGACGGAAACGC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGCCTTTGCAGCTGGGATaGATGTTCAAGTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMPLQLG*MFKLKH
Trigger: GTGCTTCAACTTGAACATTCATCCCAGCTGCAAAGG...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCTGGACAGACAAGGATaGCACAGGTTCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGLDRQG*HRFFAP
Trigger: AGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGCACATTCTCACAGCTTaGGAACGCTTGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQHILTA*ERLTQE
Trigger: TTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTG...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGGTGTTTTATGCGTGTaGTATATGTGTATCCATCCT +
Preference number: 4 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPGVLCV*YMCIHP
Trigger: AGGATGGATACACATATATCACACGCATAAAACACC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAGGCTCGGGAGAAAAGTaGACCCCTTGGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGGSGEK*TPWCPA
Trigger: AGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAGCC...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGCTGTGGGTCCACCTaGCACTGTCACGTTAATCTC +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIGCGST*HCHVNL
Trigger: GAGATTAACGTGACAGTGTCAGGTGGACCCACAGCC...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGAAGGTGATCTTCCACTaGCATGCGTTCCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWKVIFH*HAFPEL
Trigger: GAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCGCCTGGCCAGGCGGATaGCAACAGAAAATGGAGCGT +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLAWPGG*QQKMER
Trigger: ACGCTCCATTTTCTGTTGGCATCCGCCTGGCCAGGC...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGGGGTTCATGGTCTCATaGTTCCTCTCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVGFMVS*FLSSML
Trigger: CAGCATGGAGGAGAGGAAGCATGAGACCATGAACCC...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLSSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACATCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTSSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGCTTCCTCTCCTCCATaGTGCCTCACTCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENASSPP*CLTLST
Trigger: AGTGCTGAGAGTGAGGCAGCATGGAGGAGAGGAAGC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGGACAAGGGCGAGTTCTaGAGAGCCGGAATTCTCACT +
Preference number: 4 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRDKGEF*RAGILT
Trigger: AGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTC...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTCCAGGGTCCCACCTTaGACCCTCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPSRVPP*TLLACV
Trigger: CACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGTTCCTTTCCGGCTATaGCTTCGGCTTCCCTACTTC +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGVPFRL*LRLPYF
Trigger: GAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAAC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCCATCCTCCTGTCTGTCAGAGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SILLSVRVLTRVGLSPLWHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...CCACAGAGGAGAAAGACCGACCCTGGTGAGCACTCTGACAGACAGGAGGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGATCCGTTCATTCTCTTaGTCCTCAGGAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLIRSFS*SSGGCI
Trigger: TATACAGCCTCCTGAGGACCAAGAGAATGAACGGAT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGAGGCCATTTCTTTGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGHFFACHDGRNAQFLLSGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...GCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDLKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLLGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGTCCTTTTCCTTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAATGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPFPFYPWENASERWSGQCPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...TTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCGCTCTTAGGGCCGTGTaGCGGGTGGGCGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSALRAV*RVGALQ
Trigger: CTGCAGGGCGCCCACCCGCCACACGGCCCTAAGAGC...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGGAACTCCTTCTTCATaGAGCCCTGTTTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAGTPSS*SPVSTG
Trigger: CCCGGTGGAAACAGGGCTCCATGAAGAAGGAGTTCC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGAGGGGGAGGTGGGATaGCTGTGGGTCCACCTGACA +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTEGEVG*LWVHLT
Trigger: TGTCAGGTGGACCCACAGCCATCCCACCTCCCCCTC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTACMTC*SLWFPA
Trigger: AGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTAGAAGAGCTGATTCCTaGGGAGACCGGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTRRADS*GDRMGL
Trigger: CAGCCCCATCCGGTCTCCCCAGGAATCAGCTCTTCT...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTCCTTGGTGTCACTTTaGCTTTGGACAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGSLVSL*LWTGRG
Trigger: CCCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACAGCCCCCTCTTCTGTaGCTGCAGCGTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKQPPLL*LQRPLQ
Trigger: CTGGAGGGGACGCTGCAGCCACAGAAGAGGGGGCTG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACACGGGTCTGGTCCGGATaGCTCCTCGCTGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTRVWSG*LLAGLC
Trigger: ACATAGCCCAGCGAGGAGCCATCCGGACCAGACCCG...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTGCATGGGAGAGAGATaGCAGCTTCTGGACAGACAA +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGCMGER*QLLDRQ
Trigger: TTGTCTGTCCAGAAGCTGCCATCTCTCTCCCATGCA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACAGCAACCTCGACCAGATaGGAAAGTCAGCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTATSTR*ESQQTW
Trigger: CCAGGTTTGCTGACTTTCCCATCTGGTCGAGGTTGC...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGAGCCTCCCGAGTAGCTaGGACTACAGGCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLSLPSS*DYRHPP
Trigger: TGGCGGATGCCTGTAGTCCCAGCTACTCGGGAGGCT...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp AAATGGCGCACCTGGCTTGGCCGGAGGAAGTTGACGTaGATATTGGGATACCGAGTGACAGGGTCGATACTG +
Preference number: 4 (lower is better)
Translates to: KWRTWLGRRKLT*ILGYRVTGSIL
Trigger: CAGTATCGACCCTGTCACTCGGTATCCCAATATCAACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp TTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGGGATCTGGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGERFREMVWPS*LRKEIGDLVLA
Trigger: AGCCAGCACCAGATCCCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp CAGGACTTGTCGTCGGCCTTCTTCTTCTTGTCCTTCTaGTACCCGGAGAAGACGGACTTCCACAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QDLSSAFFFLSF*YPEKTDFHRDL
Trigger: CAAGTCCCTGTGGAAGTCCGTCTTCTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGACGACAAGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTCTCCTGCACTAGCTTaGACCACTCCTGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENSPALA*TTPASA
Trigger: AGCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTCCTCAGTCTTAAGGTaGTCTTCCACTGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVSSVLR*SSTAMR
Trigger: ACGCATGGCAGTGGAAGATCACCTTAAGACTGAGGA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCTTGGAATTCCACATTaGCGTGGATTTCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLLGIPH*RGFQCL
Trigger: TAGGCATTGAAATCCACGTCAATGTGGAATTCCAAG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTERYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPTQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QATLQTVSLLWGQQELQGSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEERLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGGTGGGTGGATCATTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQGGWII*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAATGATCCACCCACC...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCACTGGAGCCCTCGGATaGAGTGAAAGAGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLTGALG*SERAIW
Trigger: CCAGATGGCTCTTTCACTTCATCCGAGGGCTCCAGT...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATCGCCGGGACTTCTGTaGGGACTTCTCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPSPGLL*GLLKDI
Trigger: GATGTCCTTGAGAAGTCCTCACAGAAGTCCCGGCGA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGTGCTCCAGGGAGCATaGAGAAGACAGTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSVLQGA*RRQCPS
Trigger: CGAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCAC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACCCTGGCCCCCAAACTaGGACAAGGGCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKPWPPN*DKGEFC
Trigger: GCAGAACTCGCCCTTGTCTCAGTTTGGGGGCCAGGG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAGCTGGTGCGGAACCGTaGGAAAGGAACAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPAGAEP*ERNSLA
Trigger: AGCCAAACTGTTCCTTTCTCACGGTTCCGCACCAGC...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTTGGTCAAAATCGGCCTaGGGATGGCCGCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSWSKSA*GWPPGT
Trigger: TGTCCCTGGCGGCCATCCTCAGGCCGATTTTGACCA...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACATGCTGCAGTCGACTCTaGCGGTCTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTCCSRL*RSSSSS
Trigger: GCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCA...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTECSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTGTCCAGCAAACTCTaGTTTTTGGCTGTCATAACG +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLLSSKL*FLAVIT
Trigger: CGTTATGACAGCCAAAAAGCAGAGTTTGCTGGACAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000414725.6
CDS-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGCTATGTGCTGACTGCTTTGATGGACAAGCACCCCACCCCGATTAGCTCAGTGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GYVLTALMDKHPTPISSVYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CACTGAGCTAATCGGGGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACGTTGGCCCGTCCGTTTaGATCTGTGGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDVGPSV*ICGGAI
Trigger: GATGGCGCCACCACAGATGCAAACGGACGGGCCAAC...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTACGATCCGCTCTGGGGTaGCCCTCAGTCGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVRSALG*PSVAWR
Trigger: TCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCG...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGCTTCCTCTCCTCCATaGTGCCTCACTCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQASSPP*CLTLST
Trigger: AGTGCTGAGAGTGAGGCAGCATGGAGGAGAGGAAGC...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGAGGCTGCCCCCGGCATaGACGGAGGAGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKRLPPA*TEERSV
Trigger: CACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCT...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTTTCAAGCAATTCTCATaGCTTACCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCFKQFS*LTLPSS
Trigger: GCTACTTGGGAGGGTAAGGCATGAGAATTGCTTGAA...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCCACAGCAAGGGGGCTaGCCAGTCTGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSPQQGG*PVCPWC
Trigger: ACACCAAGGACAGACTGGGCAGCCCCCTTGCTGTGG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGTGAAGAATTTCTCCTaGAGGCTTGAGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPVKNFS*RLESSV
Trigger: GACTGAGGACTCAAGCCTGCAGGAGAAATTCTTCAC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGTGACGACCTCTTCTTaGTCTTCCCACTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQVTTSS*SSHWSP
Trigger: AGGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCAC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTACGGGAAGCACCCTGTaGTTTCCAGAGTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPTGSTL*FPESTV
Trigger: CACGGTGGACTCTGGAAAGCACAGGGTGCTTCCCGT...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCCATCCCAGCATCCACTaGAGCACTCGCGTTTCCGTC +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSHPSIH*STRVSV
Trigger: GACGGAAACGCGAGTGCTGCAGTGGATGCTGGGATG...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACACTGCTGGCCCCCTCTTaGCACAGTGACCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTLLAPS*HSDPGP
Trigger: CGGCCCAGGGTCACTGTGGCAAGAGGGGGCCAGCAG...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACGCCCTGATTCTGAGCTaGCGGACTAAGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDALILS*RTKMFW
Trigger: CCAGAACATCTTAGTCCGGCAGCTCAGAATCAGGGC...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGAGGCATGAGCCATCGTaGCTGGCCACACCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLRHEPS*LATPEL
Trigger: AAGCTCAGGTGTGGCCAGGCACGATGGCTCATGCCT...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGATGCCAACAGAAAATaGAGCGTTGGGTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENDANRK*SVGWEL
Trigger: GAGCTCCCACCCAACGCTCCATTTTCTGTTGGCATC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQLQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPLQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTGGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: LAMLGSSRPFTPEPGVLSNSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...TGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAATGGCGCACCTGGCTTaGCCGGAGGAAGTTGACGTT +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTMAHLA*PEEVDV
Trigger: AACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCAT...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACCCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAATTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGGTTCCCGGCTTCACTaGACTCTTCCTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPGSRLH*TLPPPR
Trigger: ACGAGGAGGAGGAAGAGTCCAGTGAAGCCGGGAACC...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS-3UTR CCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGAGGGACCTCTCTCTTaGTGCTTCGGTGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEEGPLS*CFGEAG
Trigger: GCCCGCCTCACCGAAGCACCAAGAGAGAGGTCCCTC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCTCAGGTGATTTCTCCTaGGTGGCGGCAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSSGDFS*VAAGTG
Trigger: ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGA...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTCTGGCTGTGATCGGATaGGAGAGTGCACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESLAVIG*ESAQLS
Trigger: TGAAAGCTGTGCACTCTCCCATCCGATCACAGCCAG...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATCTCCCGGATGTGCATaGGAGAGAGATGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPSPGCA*ERDGSF
Trigger: GAAGCTGCCATCTCTCTCCCATGCACATCCGGGAGA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAGGAGAATCAGCGCTGTaGCGGCCACTAGCGGCGTTA +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTGESAL*RPLAAL
Trigger: TAACGCCGCTAGTGGCCGCCACAGCGCTGATTCTCC...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCCACGTCCAATTTTATaGGACGACTGGGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKPRPIL*DDWGLK
Trigger: CTTCAAACCCCAGTCGTCCCATAAAATTGGACGTGG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCATTCGAGGAGAGGTCTaGGAAAGGCCACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCIRGEV*ERPRRQ
Trigger: CTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAAT...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGAGAGAAAACCTGCCTaGAGCTGCGCACATTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENERKPA*SCAHSH
Trigger: GTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGGCTGCTCCCGCACCTaGTGTTTTATGCGTGTGATA +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWGCSRT*CFMRVI
Trigger: TATCACACGCATAAAACACCAGGTGCGGGAGCAGCC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCACAGGGAAGCTGCATGTaGACCTCCACGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPQGSCM*TSTVFS
Trigger: GCTGAATACCGTGGAGGTCCACATGCAGCTTCCCTG...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTCCGAACGCAAGCAGCTaGCACATGAAAAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAPNASS*HMKKES
Trigger: GGACTCCTTTTTCATGTGCCAGCTGCTTGCGTTCGG...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACACACCCAGCAGTTTGTaGAGCTCTGGACGCATCTCA +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDTPSSL*SSGRIS
Trigger: TGAGATGCGTCCAGAGCTCCACAAACTGCTGGGTGT...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGTTCACCTGGCTTGGCTaGGTTCTCATGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLFTWLG*VLMAPR
Trigger: CCTGGGAGCCATGAGAACCCAGCCAAGCCAGGTGAA...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGTGCGTTCACCTGGCTTaGCTGGGTTCTCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLCVHLA*LGSHGS
Trigger: GGAGCCATGAGAACCCAGCCAAGCCAGGTGAACGCA...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTATGGCTATAAAATGTTaGTCCCACCTGCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFMAIKC*SHLQGT
Trigger: AGTACCCTGCAGGTGGGACCAACATTTTATAGCCAT...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACCGGACTAAGATGTTCTaGACTCTGAGCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNRTKMF*TLSCRR
Trigger: CCTCCGGCAGCTCAGAGTCCAGAACATCTTAGTCCG...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACAAAACGGCTAACTCAGTaGAGCCAGACAGGAGACATG +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTKRLTQ*SQTGDM
Trigger: CATGTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTT...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTTGGTGGAACTCCTTTTaGGACAGCCTAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSWWNSF*DSLGMF
Trigger: GAACATTCCTAGGCTGTCCCAAAAGGAGTTCCACCA...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACTGGTCTCGAACTTTTaGCCTCAAGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLLVSNF*PQVIRP
Trigger: TGGGCGGATCACTTGAGGCCAAAAGTTCGAGACCAG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp AGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTaGAGAACGCTTGACGCAGGAAGTCACCAGAGTACT +
Preference number: 4 (lower is better)
Translates to: RKPAWSCAHSHS*RTLDAGSHQST
Trigger: AGTACTCTGGTGACTTCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp TCATATAAATGGCGCACCTGGCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATACCGAGTGACAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SYKWRTWLGRRK*TLILGYRVTGS
Trigger: CGACCCTGTCACTCGGTATCCCAATATCAACGTCAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
3UTR CAA 72 bp GACAGCTTATCAGGCTCCCCCACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAAATGCCCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSLSGSPTEAIS*PVMMGEMPNSF
Trigger: GAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGTGGGGGAGCCTGATAAGCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCTCTTCAAATTTGGTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: SPVSVCRWTVRAHSLQIWFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...CCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRASSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAACAGGCCGTTCACGCCTaGACCTGGGGTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEQAVHA*TWGSLS
Trigger: ACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTG...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGTACTTCCTGAATCTCTaGATTGAGTCTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYREYFLNL*IESDGG
Trigger: TCCTCCATCAGACTCAATTCAGAGATTCAGGAAGTA...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGCTAAATCAAGGTGTGTaGTTCAAATGCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EAFADTGSPGVQGSGYRELNQGV*FKCSPR
Trigger: CCTTGGAGAGCATTTGAATCACACACCTTGATTTAG...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTAGCTTGAACCACTCCTaGATCAGCTTGGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRSLNHS*ISLGSS
Trigger: GGACGACCCCAAGCTGATGCAGGAGTGGTTCAAGCT...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTACCAGTGAGTCTCTCTaGTCCACCACCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRTSESL*STTSSI
Trigger: GATGCTGGAGGTGGTGGAGCAGAGAGACTCACTGGT...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGTTGTCCAGCAAACTCTaGTTTTTGGCTGTCATAACG +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRLSSKL*FLAVIT
Trigger: CGTTATGACAGCCAAAAAGCAGAGTTTGCTGGACAA...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR GCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLLGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACATCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENRSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRARSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAACTTGCTGCCCCACTaGCTCTCACAATTTATAAAT +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRNLLPH*LSQFIN
Trigger: ATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACATACCTGCCATAAATaGCAGGGGTTAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIHTCHK*QGLAFL
Trigger: CAGGAAGGCTAACCCCTGGCATTTATGGCAGGTATG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGGCAGCCTCCAGGTCCAGCTTCATTTCAACGTaGAAACACAGGAAAAACACG +
Preference number: 4 (lower is better)
Translates to: AQDQLRLKPLDSMAASRSSFIST*KHRKNT
Trigger: CGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCT...GGACCTGGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGATGACACAGGTTCTTTaGTCCTTTGCAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGMTQVL*SFAAGM
Trigger: CATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCAT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGACACTGGGCTCTCCTaGTACGTCTGGCCACTTACA +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSDTGLS*YVWPLT
Trigger: TGTAAGTGGCCAGACGTAGCAGGAGAGCCCAGTGTC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAAAACCTGCCTGGAGCTaGGCACATTCTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPKPAWS*AHSHSL
Trigger: CAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTATGTGTATCCATCCTaGTTCCCTGCCTTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGYVYPS*FPAFKG
Trigger: TCCCTTGAAGGCAGGGAAGCAGGATGGATACACATA...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTAGCTTGGAAGCAAACTaGATGAAGGCCGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATSLEAN*MKAEWP
Trigger: AGGCCACTCGGCCTTCATGCAGTTTGCTTCCAAGCT...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTCTGAGAGTGTCAGCTaGAAAGGCCTGTGGGTACTT +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRASESVS*KGLWVL
Trigger: AAGTACCCACAGGCCTTTGCAGCTGACACTCTCAGA...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCTTCTGGACTCTGAGCTaGCGGAGGGTAAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLFWTLS*RRVSPS
Trigger: TGAGGGGCTTACCCTCCGGCAGCTCAGAGTCCAGAA...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACACACAAGAGAATCAAGTaGCGTCATCATCGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTHKRIK*RHHRLY
Trigger: GTAGAGGCGATGATGACGGCACTTGATTCTCTTGTG...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACATTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRNSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACACTGAGCAGAGCCTCCTaGTCCACGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTLSRAS*STFSRE
Trigger: TTCCCGAGAAAACGTGGACCAGGAGGCTCTGCTCAG...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACATTGAAGCAGCTCCGGTaGAAGAACTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTLKQLR*KNLPSA
Trigger: TGCCGAGGGCAAGTTCTTCCACCGGAGCTGCTTCAA...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGCCGAGAGGCGCAGGGTaGTGGCGCAGTACTCGCACT +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKPRGAG*WRSTRT
Trigger: AGTGCGAGTACTGCGCCACCACCCTGCGCCTCTCGG...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: AESPRVPPRVPVLPSAESSIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEERLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACAAGGCAGCAGGACGGCTaGCTGGCCCCACGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTRQQDG*LAPRSC
Trigger: ACAAGAGCGTGGGGCCAGCCAGCCGTCCTGCTGCCT...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACAGGCTGGAGTGTACTaGTGTGATCTCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIQAGVY*CDLRSL
Trigger: CAGTGATCTGAGATCACACCAGTACACTCCAGCCTG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTAGGGGGCATCAGCTTTaGGCTTCTCTTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRRGHQL*ASLWGA
Trigger: TGCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCT...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTAAGCGTATGGGGGACTaGGTAGGGGATGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSKRMGD*VGDGTV
Trigger: CACTGTCCCATCCCCTACCCAGTCCCCCATACGCTT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTAGCGGCCCAGGCATTTaGCCACTTAGGGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSSGPGI*PLRVQC
Trigger: ACACTGGACCCTAAGTGGCCAAATGCCTGGGCCGCT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCCCTCTTGGCCTGTGTaGATGAGGGCCCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSPSWPV*MRAHPE
Trigger: TTCAGGATGGGCCCTCATCCACACAGGCCAAGAGGG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTTCACGTGAGAACAGGTaGAGAATCAGCGCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRSRENR*RISAVA
Trigger: CGCCACAGCGCTGATTCTCCACCTGTTCTCACGTGA...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAATTCGAGGAGAGGTCTaGGAAAGGCCACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTIRGEV*ERPRRQ
Trigger: CTGCCTGCGTGGCCTTTCCCAGACCTCTCCTCGAAT...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCCTCTCCTGCTACGTCTaGCCACTTACAGCAGATCCC +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSLSCYV*PLTADP
Trigger: GGGATCTGCTGTAAGTGGCCAGACGTAGCAGGAGAG...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACACCTGGAGCTGTATGTaGGACATTCAGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDTWSCM*DIQNTQ
Trigger: CTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGT...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTGTCAGCTATGGCTCTTaGGGTAAGGTGGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATVSYGS*GKVGGK
Trigger: CTTACCTCCCACCTTACCCCAAGAGCCATAGCTGAC...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGACCTGCTGGAGCCTCTaGTTCCCGGCTTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQTCWSL*FPALNV
Trigger: GACATTTAAAGCCGGGAACCAGAGGCTCCAGCAGGT...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR TCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACACGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTRSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCTTGGAATTCCACATTaGCGTGGATTTCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAALGIPH*RGFQCL
Trigger: TAGGCATTGAAATCCACGTCAATGTGGAATTCCAAG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAARYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATATATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKRSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGAGGCCTCCCTTCACTaGGAAGAAACCGAGACACAC +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLEASLH*EETETH
Trigger: GTGTGTCTCGGTTTCTTCTCAGTGAAGGGAGGCCTC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGAGGATGCACCATCAGTaGCAGCTTTGGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVRMHHQ*QLWNCR
Trigger: TCTGCAGTTCCAAAGCTGTCACTGATGGTGCATCCT...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTTTATAAATGTGTTTTaGCACACAGCATCTCTCACC +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEFINVF*HTASLT
Trigger: GGTGAGAGATGCTGTGTGTCAAAACACATTTATAAA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGTTTATAAATGTGTTTTaGCACACAGCATCTCTCACC +
Preference number: 4 (lower is better)
Translates to: ACVAASQVLRELLLHGALFINVF*HTASLT
Trigger: GGTGAGAGATGCTGTGTGTCAAAACACATTTATAAA...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGTGGAGTGTACTGGTGTaGTCTCAGATCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVWSVLV*SQITAT
Trigger: GGTTGCAGTGATCTGAGATCACACCAGTACACTCCA...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATCTCTCTCACGGATATaGGTCCAGTGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTSLSRI*VQCTSA
Trigger: GGCTGACGTGCACTGGACTCATATCCGTGAGAGAGA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGCTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKLGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTCTCTGTCAGCATCCGACGGGCTGTCAGACCAGTGCTGATCATCATCCAGCTCTTGTCCAGCAAACTCTaGTTTTTGGCTGTCATAACG +
Preference number: 4 (lower is better)
Translates to: LSVSIRRAVRPVLIIIQLLSSKL*FLAVIT
Trigger: CGTTATGACAGCCAAAAAGCAGAGTTTGCTGGACAA...GAGCTGGATGATGATCAGCACTGGTCTGACAGCCCGTCGGATGCTGACAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCAACTGGTGTCCGTTCTaGTCCCGCACCAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSNWCPF*SRTKAA
Trigger: CGCCGCCTTGGTGCGGGAGCAGAACGGACACCAGTT...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTGTCACGTTTACCCCTaGATAGCCATCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQCHVYP*IAICLP
Trigger: AGGCAGACAGATGGCTATGCAGGGGTAAACGTGACA...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACTCCTCCGGTACCTCCTaGAGTGCCTCAGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHSSGTS*SASACL
Trigger: GAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGA...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAGCTTCCTCTCCTCCATaGTGCCTCACTCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTASSPP*CLTLST
Trigger: AGTGCTGAGAGTGAGGCAGCATGGAGGAGAGGAAGC...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGGGGCAGGGCGAACCTaGCCAGGCAGGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLGAGRT*PGRQQD
Trigger: GTCCTGCTGCCTGCCTGGGCAGGTTCGCCCTGCCCC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACCTAGGGTTATAGCATaGACATCCCCAAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLPRVIA*TSPKVS
Trigger: TGACACCTTTGGGGATGTGCATGCTATAACCCTAGG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACCTAGGGTTATAGCATaGACATCCCCAAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLKPSLILEALGCRAVDIPRVIA*TSPKVS
Trigger: TGACACCTTTGGGGATGTGCATGCTATAACCCTAGG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAACACAGCCAGGCTGGTaGGGAACCGTGAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTTQPGW*GTVRKE
Trigger: TTCCTTTCTCACGGTTCCGCACCAGCCTGGCTGTGT...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTCCCCGTCCATCTCTGGCCGGTAATGAACCCGGTGATGAGCACTCGGGGAAAACTGCGAGTCCTGTCATaGTATGACAAGAATAAATGT +
Preference number: 4 (lower is better)
Translates to: LPVHLWPVMNPVMSTRGKLRVLS*YDKNKC
Trigger: ACATTTATTCTTGTCATAGCATGACAGGACTCGCAG...TTTTCCCCGAGTGCTCATCACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAGGGTTCCCTTGCAGGTaGTGGCCTGGACAAACCGGT +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLGFPCR*WPGQTG
Trigger: ACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCC...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: EDLTLREKTCLELRTFSQVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLTQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTTACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGAACTCCTTCTTCATaGAGCCCTGTCTCCGTATGC +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTGTPSS*SPVSVC
Trigger: GCATACGGAGACAGGGCTCCATGAAGAAGGAGTTCC...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACAAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCTTCTCTCAGTGGAGCTaGCCACGGCGTTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSFSQWS*PRRWPV
Trigger: GACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAA...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGGCACAGTGGGGAGAGTaGGGCCTCCATGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKAQWGE*GLHGCS
Trigger: AGAGCACCCATGGAGGCCCCACTCTCCCCACTGTGC...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCTGCCCAGTCTGTCCTTaGTGTCACTTTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLCPVCP*CHFGFG
Trigger: TCCAAAGCCAAAGTGACACCAAGGACAGACTGGGCA...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGACCCATTCCCTTTGTaGGTCAGATGTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESDPFPL*VRCYHL
Trigger: AAGGTGGTAACATCTGACCCACAAAGGGAATGGGTC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACAACACCGCCTAGCCTCTaGGCGCATCTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTTPPSL*AHLPSP
Trigger: GGGAGAGGGAAGATGCGCCCAGAGGCTAGGCGGTGT...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCCAAATCTTCTTCCTGTaGGAGGTACCTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSQIFFL*EVPGAT
Trigger: AGTGGCGCCAGGTACCTCCCACAGGAAGAAGATTTG...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
3UTR CAA 72 bp TTGGCTCTCTTGATCATCTGTAATCGGCTGAACACTTaGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LALLIICNRLNT*KPSLILEALGC
Trigger: GCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGTGTTCAGCCGATTACAGATGATCAAGAGAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
3UTR CAA 72 bp GGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTTaGTGGAGCTCTGGACGCATCTCACAGGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GAVCGTFRTPSS*WSSGRISQASF
Trigger: AAAACTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp CATCTGTCTGCCTCTGGCACCAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCATTGCGAGTCAATTTGG +
Preference number: 4 (lower is better)
Translates to: HLSASGTNPAVC*NELQTHCESIW
Trigger: CCAAATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTGCCAGAGGCAGACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACATCTCCTGCACTAGCTTaGACCACTCCTGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTSPALA*TTPASA
Trigger: AGCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGA...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKAPGKP*GFPCRW
Trigger: CCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGC...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATTTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAAGCTTCCTCCTCCTCTaGTTGACTGGTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTSFLLL*LTGLSP
Trigger: AGGAGAAAGACCAGTCAATCAGAGGAGGAGGAAGCT...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTACGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLRSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMRLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGGGAATAAATACTTCCTaGATCTCTGAATTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ACTEERSVRQPKNESRQRGINTS*ISELSL
Trigger: CAGACTCAATTCAGAGATTCAGGAAGTATTTATTCC...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AGTCCTTTTCCTTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAACACTTTCCTTCCCAATaGCAGACTTGGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPFPFYPWENASERWSGQHFPSQ*QTWSWG
Trigger: TCCCCAGCTCCAAGTCTGTCATTGGGAAGGAAAGTG...TTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACGGTGCACTGGTGGCTaGATCACCCAGAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRCTGG*ITQSPS
Trigger: GGAGGGACTCTGGGTGATTCAGCCACCAGTGCACCG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCTAAATCAAGGTGTGTaGTTCAAATGCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ASMGALDREAEFWMRMHHLNQGV*FKCSPR
Trigger: CCTTGGAGAGCATTTGAATCACACACCTTGATTTAG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTTGCATAGATGCTGACTaGTTTCATGTTTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAACIDAD*FHVFCA
Trigger: AGCACAGAAAACATGAAATCAGTCAGCATCTATGCA...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACCCTTTATGTCCCCATaGAGATCCGGCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKPFMSP*RSGTRQ
Trigger: CTGCCTTGTGCCGGATCTTCATGGGGACATAAAGGG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCATGGAAGCAAACTGCATaGAGGCCGAGTGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPWKQTA*RPSGLG
Trigger: GCCAAGGCCACTCGGCCTTCATGCAGTTTGCTTCCA...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTACCATGGAAATTCTATaGCCAACTCCTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRATMEIL*PTPPPH
Trigger: ATGTGGAGGAGGAGTTGGTCATAGAATTTCCATGGT...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAACGTCCTCAGGGCTCTaGCTCTTTCTTGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGTSSGL*LFLGGF
Trigger: AAAACCACCAAGAAAGAGTCAGAGCCCTGAGGACGT...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACTGGCGATGGCCAGTTTaGCACGGAATTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDWRWPV*HGILSD
Trigger: GTCGGAAAGAATTCCGTGGCAAACTGGCCATCGCCA...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR GCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLYADGL*GRILFK
Trigger: TTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATA...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGTTACAGCTCTGGAACTaGCTAAGCATGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVLQLWN*LSMHPL
Trigger: CAGTGGATGCATGCTTAGGCAGTTCCAGAGCTGTAA...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGAACTACAAGCAAAATaGAGCAACCCACAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESELQAK*SNPQAS
Trigger: TGAGGCTTGTGGGTTGCTGCATTTTGCTTGTAGTTC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGGTTCTTTGCTCCTTTaGAGCTGGGATGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESGSLLL*SWDECS
Trigger: TGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGTGTGCTGTGGAGGATaGCACAGTGTTAAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTVCCGG*HSVKAD
Trigger: GTCAGCCTTAACACTGTGGCATCCTCCACAGCACAC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTGGAGGTGCTGGCTCATaGCCTTGGCCTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFGGAGS*PWPCHR
Trigger: TCTGTGACAAGGCCAAGGGCATGAGCCAGCACCTCC...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTCATTTTGAACTCCCGTaGTATACCAAGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGHFELP*YTKSPS
Trigger: AGAAGGTGACTTGGTATAGCACGGGAGTTCAAAATG...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGAGCTCACTGGCCTTTaGCACCCAAGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTELTGL*HPSWGT
Trigger: TGTCCCCCAGCTTGGGTGGCAAAGGCCAGTGAGCTC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAACCTCCTTACAGGCGTaGTGCCCGTACGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTTSLQA*CPYAAV
Trigger: CACAGCAGCGTACGGGCAGCACGCCTGTAAGGAGGT...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAACTCGTAGCGCACCATaGCGTTCTTCTCCTGCACTA +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTTRSAP*RSSPAL
Trigger: TAGTGCAGGAGAAGAACGCCATGGTGCGCTACGAGT...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCCATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAANSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGATCCGTTCATTCTCTTaGTCCTCAGGAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWIRSFS*SSGGCI
Trigger: TATACAGCCTCCTGAGGACCAAGAGAATGAACGGAT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACATCAGGTACATCACCATaGACAGCTTATCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTSGTSP*TAYQAP
Trigger: GGGAGCCTGATAAGCTGTCCATGGTGATGTACCTGA...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNNASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGTACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACAGCTGGCCACGGCGTTaGCCCGTCCGTTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNSWPRR*PVRLHL
Trigger: CAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCT...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTACATCCTGGGCAACCATaGGGAGACCCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLHPGQP*GDPVSA
Trigger: AGCAGAGACTGGGTCTCCCCATGGTTGCCCAGGATG...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACACTGGCTGTGATCGGATaGGAGAGTGCACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTLAVIG*ESAQLS
Trigger: TGAAAGCTGTGCACTCTCCCATCCGATCACAGCCAG...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATCCTTGGTGTCACTTTaGCTTTGGACAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTSLVSL*LWTGRG
Trigger: CCCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGTTGTTTACGTTTCTTTaGTGGTGCTCCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWLFTFL*WCSREH
Trigger: ATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAA...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAGCTCTGCTGTTGGCCTaGCCCAAAACAGAACGGAAA +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTALLLA*PKTERK
Trigger: TTTCCGTTCTGTTTTGGGCCAGGCCAACAGCAGAGC...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAAGAGATGGCAGCTTCTaGACAGACAAGGATGACACA +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPRDGSF*TDKDDT
Trigger: TGTGTCATCCTTGTCTGTCCAGAAGCTGCCATCTCT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGGCTGCTCCCGCACCTaGTGTTTTATGCGTGTGATA +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSGCSRT*CFMRVI
Trigger: TATCACACGCATAAAACACCAGGTGCGGGAGCAGCC...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAGCCACAGCCTGCCAGTaGAACTCCCCTCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPATACQ*NSPLIC
Trigger: GCAAATCAGAGGGGAGTTCCACTGGCAGGCTGTGGC...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCCAGTTTGTGGAGCTCTaGACGCATCTCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLQFVEL*THLTGK
Trigger: CTTGCCTGTGAGATGCGTCCAGAGCTCCACAAACTG...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGCTCTGACTCTTTCTTaGTGGTTTTGCTCTTTAACC +
Preference number: 4 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGALTLS*WFCSLT
Trigger: GGTTAAAGAGCAAAACCACCAAGAAAGAGTCAGAGC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCATGAGCCATCGTGCCTaGCCACACCTGAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLMSHRA*PHLSFS
Trigger: AGAAAAGCTCAGGTGTGGCCAGGCACGATGGCTCAT...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCGCACCCCAAGCTGAATaGCTCGGGAGAAAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLAPQAE*LGRKVN
Trigger: GTTCACTTTTCTCCCGAGCCATTCAGCTTGGGGTGC...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp AGGGAAGGGAAAGGATGCAACTCTGGGAACCTCTCGTaGAAGGCCAAATGGGTAATTCTCTTGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: REGKGCNSGNLS*KAKWVILLSHH
Trigger: ATGGTGGGACAAGAGAATTACCCATTTGGCCTTCAACGAGAGGTTCCCAGAGTTGCATCCTTTCCCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp TTGCTTGAACGAGCTACAGACTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTCACCAGGCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: LLERATDSLRVN*GVVREFTRLSI
Trigger: AATGGAGAGCCTGGTGAATTCCCGAACCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCGTTCAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKRSKRT*AGFMVS
Trigger: TGAGACCATGAACCCAGCTCATGTCCTCTTTGACCG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACATTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGGAATAAATACTTCCTaGATCTCTGAATTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAGINTS*ISELSL
Trigger: CAGACTCAATTCAGAGATTCAGGAAGTATTTATTCC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTACCCCTCTTGCCACAGTaGCCCTGGGCCGTGAACCAC +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLPLLPQ*PWAVNH
Trigger: GTGGTTCACGGCCCAGGGTCACTGTGGCAAGAGGGG...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACAACCCTAGGGTTGAATaGAATTCTACTGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNNPRVE*NSTAWL
Trigger: TAGCCAGGCAGTAGAATTTCATTCAACCCTAGGGTT...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCAGGCACCCCAAGCTaGATGGCTCGGGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTAGTPS*MAREKS
Trigger: ACTTTTCTCCCGAGCCATTCAGCTTGGGGTGCCTGC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTATGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLCSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTTGGGGTGCACCAGTaGCCGCCAGCCTATCCGTTC +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRELGVHQ*PPAYPF
Trigger: GAACGGATAGGCTGGCGGGCACTGGTGCACCCCAAG...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAATGGCGATGGCCAGTTTaGCACGGAATTCTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEWRWPV*HGILSD
Trigger: GTCGGAAAGAATTCCGTGGCAAACTGGCCATCGCCA...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTTCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGFEAAERLARLSASFQRSVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAAGAGACGGCAGCTGCTaGTGGGTAGAGAAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKRDGSC*WVEKSA
Trigger: GGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCT...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAAGTAGCATGTGTCGCTaGCTCCCAGGTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKSSMCR*LPGSAG
Trigger: TCCCGCAGAACCTGGGAGGCAGCGACACATGCTACT...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGTGGTGGCGCCATCCTaGAGGGGTCCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLVVAPS*RGPLAS
Trigger: GGAGGCCAAAGGACCCCTGCAGGATGGCGCCACCAC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCACGTTTCTTTGGTGGTaGTCCAGGGAGCATGAAGAA +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCTFLWW*SREHEE
Trigger: TTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGT...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCACCTCTACTGGTCGAGTaGACAGTAGAGGCGGTTACC +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPPLLVE*TVEAVT
Trigger: GGTAACCGCCTCTACTGTGCACTCGACCAGTAGAGG...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTATTCCCTTGCAGGTGGTaGCCTGGACAAACCGGTCAA +
Preference number: 4 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVFPCRW*PGQTGQ
Trigger: TTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAA...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGGGCTTTAGTTCCAGGTaGTCACAGAGCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLGFSSR*SQSSWK
Trigger: TTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCC...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAACACAGGATGAGTCTTaGGGTGCACCAGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKTQDES*GAPVPA
Trigger: GGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGT...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTAGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAAGACGGCAGCTGCTGCTaGGTAGAGAAGTCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCREDGSCC*VEKSAA
Trigger: GGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTC...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACACATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GACAGGGTCGATACTGTACTGGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: DRVDTVLAEVLTHILRGGHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...ACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: AACGPPRYSASSLVSLESFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKVSVCR*TVRAHS
Trigger: AGAATGCGCCCGCACAGTCCATCGGCATACGGAGAC...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACCTGCAGGGGTCCTTTaGCCTCCTTTCCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKPAGVL*PPFQTG
Trigger: CCCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACGTTTGCATCTGTGGTaGCGCCATCCTGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRLHLW*RHPAGV
Trigger: GACCCCTGCAGGATGGCGCCACCACAGATGCAAACG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCREVAWRC*APPGRS
Trigger: TGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGAC...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGAGAGTGGGGCCTCCATaGGTGCTCTGGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKRVGPP*VLWIGK
Trigger: CTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCT...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCATCTGGGCACAGTaGGGAGAGTGGGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMLIWAQ*GEWGLH
Trigger: ATGGAGGCCCCACTCTCCCCACTGTGCCCAGATGAG...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTCTGTTGAGGGGCTGTaGACTGGAATGAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCSVEGL*TGMNRR
Trigger: TCTTCTGTTCATTCCAGTCCACAGCCCCTCAACAGA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCCCCGATTAGCTCAGTaGCTTGATGAGCTGTACACA +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSPRLAQ*LDELYT
Trigger: TGTGTACAGCTCATCAAGCCACTGAGCTAATCGGGG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACATACCTACACAGGACCTaGGCCGCCCTCAGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTYLHRT*AALRCD
Trigger: ATCACACCTGAGGGCGGCCCAGGTCCTGTGTAGGTA...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TTCAGGATCCGAACTATGGAACCTCATGGTTATCGGGCAAGGAATGTCTGGGGAAGCTGCAAAGGCCTGTaGGTACTTCACGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FRIRTMEPHGYRARNVWGSCKGL*VLHEKD
Trigger: ATCTTTCTCGTGAAGTACCCACAGGCCTTTGCAGCT...TCCCCAGACATTCCTTGCCCGATAACCATGAGGTTCCATAGTTCGGATCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGATTAGATGGCAAGAATaGCAACCTCGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLIRWQE*QPRPDG
Trigger: CCCATCTGGTCGAGGTTGCCATTCTTGCCATCTAAT...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACCTACAACATACATTCTaGGACCCTGAAACACCTGAG +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNLQHTF*DPETPE
Trigger: CTCAGGTGTTTCAGGGTCCCAGAATGTATGTTGTAG...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTTTTCTAAAGTCATGGTaGACAGTACAAGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATFLKSW*TVQGQG
Trigger: ACCCTGGCCTTGTACTGTCCACCATGACTTTAGAAA...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp GGGAACCTCTCGTTGAAGGCCAAATGGGTAATTCTCTaGTCCCACCATGGAAATTCTATGACCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNLSLKAKWVIL*SHHGNSMTNSS
Trigger: GGAGGAGTTGGTCATAGAATTTCCATGGTGGGACAAGAGAATTACCCATTTGGCCTTCAACGAGAGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp AAGGTCCACACTGTGATTCCTTTGGGACACCACATTTaGAACTCCCGTGCTATACCAAGTCACCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KVHTVIPLGHHI*NSRAIPSHLLA
Trigger: AGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTGGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTATACTCTGACACAGGATaGGTCTTGGGGTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLYSDTG*VLGCTS
Trigger: ACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTA...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACTATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp AGTCCTTTTCCTTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAATATTGGGATACCGAGTaGCAGGGTCGATACTGTACT +
Preference number: 4 (lower is better)
Translates to: SPFPFYPWENASERWSGQYWDTE*QGRYCT
Trigger: AGTACAGTATCGACCCTGTCACTCGGTATCCCAATA...TTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDTQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGAGGTTGTGCTCGGCCTaGGTCTCCTCCGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRRLCSA*VSSGTS
Trigger: GGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCT...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACGGAGGAGCGGTCTGTaGGGCAGCCCAAGAATGAAT +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRRSGL*GSPRMN
Trigger: ATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACAATCTTTTCCATAAGATaGCAGGAAACTAACGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTIFSIR*QETNVL
Trigger: AAGCACGTTAGTTTCCTGTCATCTTATGGAAAAGAT...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAACAGACAGGAGACATGTaGGGCGGGTGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKQTGDM*GGCPAL
Trigger: GAGAGCCGGGCACCCGCCTCACATGTCTCCTGTCTG...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAATGGCGTTCTTCTCCTaGACTAGCTTGAACCACTCC +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKMAFFS*TSLNHS
Trigger: GGAGTGGTTCAAGCTAGTGCAGGAGAAGAACGCCAT...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AGTCCTTTTCCTTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAATCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPFPFYPWENASERWSGQSVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...TTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMLGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGTCCAGAGACGGCAGCTaGTGCTGGGTAGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKSRDGS*CWVEKS
Trigger: AGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGA...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AGGGCAGTGGATATAGGGAGTCCTAGGGTTATAGCATGCACATCCCCAAAGGTGGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RAVDIGSPRVIACTSPKVVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...CACCTTTGGGGATGTGCATGCTATAACCCTAGGACTCCCTATATCCACTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACAGACAGGGGAGCCACTaGCGGTCTCTTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNRQGSH*RSLPLC
Trigger: GCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCT...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGTCTGCCCCTCGGGTTTaGAGCCTGTGTTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKSAPRV*SLCFCP
Trigger: AGGACAGAAACACAGGCTGCAAACCCGAGGGGCAGA...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp ACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACTGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TLREKTCLELRTFSQLENCVLLI*IIIQEP
Trigger: AGGCTCCTGAATTATTATGCAAATTAGGAGGACGCA...GTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAACTTACTGCAACCTCTaGCTCCTGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPTYCNL*LLGSRH
Trigger: ATGGCGTGAACCCAGGAGGCAGAGGTTGCAGTAAGT...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTTCCCAACAGGCCTGGTACCCACAAACCCTGCGAGTCCTGTCATGCTATGACAGGGATTTCCTTTCTCTaGCTATTGTTCAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LPNRPGTHKPCESCHAMTGISFL*LLFKLF
Trigger: AAAAAGCTTGAACAATAGGCAGAGAAAGGAAATCCC...TGTCATAGCATGACAGGACTCGCAGGGTTTGTGGGTACCAGGCCTGTTGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAAACCCCTTGGTGCCCTaGTCGGACCTTAAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPNPLVP*SDLKGY
Trigger: ATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTT...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GACAGGGTCGATACTGTACTGGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: DRVDTVLAEVLTHILRGGKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...ACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTGCISP*NSTLTW
Trigger: CCACGTCAATGTGGAATTCCAAGGACTTATACAGCC...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGGTCGATACTGTACTaGCTGAAGTTCTTACTCACA +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTGSILY*LKFLLT
Trigger: TGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCC...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCATTGCGAGTCAATTTaGGGGTGGTTCGGGAATTCA +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLHCESI*GWFGNS
Trigger: TGAATTCCCGAACCACCCCCAAATTGACTCGCAATG...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACTCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACTTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDSIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGCTGGGGTTCTCTCAGTaGAGCTGGCCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRLGFSQ*SWPRRW
Trigger: CCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAG...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRCPSVA*RCWAPP
Trigger: TGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCA...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGAGAGTGGGGCCTCCATaGGTGCTCTGGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMRVGPP*VLWIGK
Trigger: CTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCT...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACAGGCTGGAGTGCAGTaGTGCAGTGGCATGATCTCG +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKQAGVQ*CSGMIS
Trigger: CGAGATCATGCCACTGCACCACTGCACTCCAGCCTG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGACCCATTCCCTTTGTaGGTCAGATGTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTDPFPL*VRCYHL
Trigger: AAGGTGGTAACATCTGACCCACAAAGGGAATGGGTC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACAACTATGGAACCTCATaGTTATCGGGCAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNNYGTS*LSGKEC
Trigger: ACATTCCTTGCCCGATAACCATGAGGTTCCATAGTT...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACACTTGGGGCCCTTTCTTaGGGGTGTGCTGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTLGALS*GCAAHF
Trigger: AAAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAG...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGGAGCTGACGGATACTaGTATGGTCGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMGADGY*YGRWLQ
Trigger: CTGGAGCCATCGACCATATCAGTATCCGTCAGCTCC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCRYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GACAGGGTCGATACTGTACTGGCTGAAGTTCTTACTCACATTCTCAGGGGTGGTCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: DRVDTVLAEVLTHILRGGRYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...ACCACCCCTGAGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCGACCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEETQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGCAGGCCGTTCACGCCTaGACCTGGGGTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRQAVHA*TWGSLS
Trigger: ACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTG...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCCCTAGAGTGGTTCTTTaGACTGCAGGTTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLPRVVL*TAGCNW
Trigger: CCAATTACAACCTGCAGTTCAAAGAACCACTCTAGG...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCATCTCATTGAGAATCTaGTTCTCTTCTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCISLRI*FSSDSS
Trigger: GGAGCTGTCAGAAGAGAAGCAGATTCTCAATGAGAT...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTTGTCCAGCAAACTCTaGTTTTTGGCTGTCATAACG +
Preference number: 4 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCLSSKL*FLAVIT
Trigger: CGTTATGACAGCCAAAAAGCAGAGTTTGCTGGACAA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRELGREV*RLPGIA
Trigger: AGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAG...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTATCTATGGATAATTaGACAAAGGGCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSPHNALARHCREHKGDTVSMDN*TKGQAT
Trigger: AGTGGCTTGGCCCTTTGTGCAATTATCCATAGATAC...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAATCCTGTCTGTCAGAGTaGTCACCAGGGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKSCLSE*SPGSVF
Trigger: AAAGACCGACCCTGGTGAGCACTCTGACAGACAGGA...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGCTTCCTCTCCTCCATaGTGCCTCACTCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMASSPP*CLTLST
Trigger: AGTGCTGAGAGTGAGGCAGCATGGAGGAGAGGAAGC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCATCTCTCACCCTCACTaGAGGGTCAGTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSISHPH*RVSGER
Trigger: TCTCTCTCCACTGACCCTGCAGTGAGGGTGAGAGAT...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGTGATCTCAGATCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMVISDH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGATCTGAGATCAC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAACGTTTCTTTGGTGGTaGTCCAGGGAGCATGAAGAA +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKTFLWW*SREHEE
Trigger: TTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGT...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACACCTTCCAAGCCACTTTaGAAACTGTTTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTPSKPL*KLFPCC
Trigger: ACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGG...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGGTACCCACAAACCCTaGGAGTCCTGTCATGCTATG +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTGTHKP*ESCHAM
Trigger: CATAGCATGACAGGACTCGCAGGGTTTGTGGGTACC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAATTGCAGGTGGTGGCCTaGACAAACCGGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKLQVVA*TNRSKR
Trigger: CCTCTTTGACCGGTTTGTCCAGGCCACCACCTGCAA...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAACCAGTATCATATAAATaGCGCACCTGGCTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKPVSYK*RTWLGR
Trigger: CCGGCCAAGCCAGGTGCGCCATTTATATGATACTGG...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATAGGTCTTTCTCCTCTGTaGCCCCGAGGAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YQRRKGYLFHASHKILPIGLSPL*PRGASS
Trigger: GGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACC...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGTCCGTTTGCATCTGTaGTGGCGCCATCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLVRLHL*WRHPAG
Trigger: CCCTGCAGGATGGCGCCACCACAGATGCAAACGGAC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAGGAACTCCTTCTTCATaGAGCCCTGTTTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKGTPSS*SPVSTG
Trigger: CCCGGTGGAAACAGGGCTCCATGAAGAAGGAGTTCC...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGCTGGCTCATGCCCTTaGCCTTGTCACAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLAGSCP*PCHRGR
Trigger: TCGGCCTCTGTGACAAGGCCAAGGGCATGAGCCAGC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGAGTCCAGAGGGTTTTaGGCCACTTGTTGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTESRGF*ATCCPN
Trigger: ATTCGGGCAACAAGTGGCCCAAAACCCTCTGGACTC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCAAAGCCGACCTAGAGTaGTTCTTTGAACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLKADLE*FFELQV
Trigger: AACCTGCAGTTCAAAGAACCACTCTAGGTCGGCTTT...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCAGGTGGGAGGTAAGCTaGATTGTAGAATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLRWEVS*IVEFSC
Trigger: GCAAGAGAATTCTACAATCCAGCTTACCTCCCACCT...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp CAAAAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTaGTCAGCTTCATTTCAACGTGCAAACACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QKGFEAAERLAR*SASFQRANTGK
Trigger: TTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCTCCTCCTCCTCTGATTaGCTGGTCTTTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSSSSSD*LVFLLF
Trigger: GAAGAGGAGAAAGACCAGTCAATCAGAGGAGGAGGA...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATACGCAGTACTCGCACTTaGAGCAGCTCCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YQRRKGYLFHASHKILPIRSTRT*SSSGGR
Trigger: TCTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCG...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAAAGTAGCTCACATCTGTaGTCCCAGCACTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRESSSHL*SQHCGR
Trigger: CCTCCCACAGTGCTGGGATCACAGATGTGAGCTACT...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGAGGATGCACCATCAGTaGCAGCTTTGGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKRMHHQ*QLWNCR
Trigger: TCTGCAGTTCCAAAGCTGTCACTGATGGTGCATCCT...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGATGAATGTTCAAGTTaGAGCACAGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARLSASFQRANTGKTRRKDECSS*STVWFP
Trigger: TGGGAACCACACTGTGCTTCAACTTGAACATTCATC...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR TCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAAAGGGCTTGGACCTCATaGCAAGCCCAGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKRAWTS*QAQWPR
Trigger: CCTTGGCCACTGGGCTTGTCATGAGGTCCAAGCCCT...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCATGGGACACCACATTTTaGACTCCCGTGCTATACCAA +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPWDTTF*TPVLYQ
Trigger: TTGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCA...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTCSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTATCGGTTGATAAAATTTaGCGTGATGGCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLSVDKI*RDGDGQ
Trigger: CTGGCCATCGCCATCACGGCAAATTTTATCAACCGA...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACGAGCTACAGACTCATTaGGAGTCAATTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHELQTH*ESIWGW
Trigger: CCACCCCCAAATTGACTCGCAATGAGTCTGTAGCTC...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAACCAACCCAGCAGTTTaGTTGAACGAGCTACAGACT +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPTNPAV*LNELQT
Trigger: AGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGT...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACCGGTCTCTTCCTTTGTaGGTAGCCAGAGAGTCGATA +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHRSLPL*VARESI
Trigger: TATCGACTCTCTGGCTACGCACAAAGGAAGAGACCG...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAGGTTCTTTGCTCCTTTaGAGCTGGGATGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEGSLLL*SWDECS
Trigger: TGAACATTCATCCCAGCTGCAAAGGAGCAAAGAACC...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTACATGTCCCATCACGGTaGAGGGCAGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLHVPSR*RADRRA
Trigger: TGCTCTCCTGTCTGCCCTGCACCGTGATGGGACATG...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACCATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACGTAAGGATAAGTCGATaGCTGTACGGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHVRISR*LYGDHR
Trigger: CCTGTGGTCTCCGTACAGCCATCGACTTATCCTTAC...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGGCTTCCCTCAGTTCCTaGAAAAATTTTTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQASLSS*KNFWLN
Trigger: ATTCAACCAAAAATTTTTCCAGGAACTGAGGGAAGC...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTATAAATGGCGCACCTaGCTTGGCCGGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNYKWRT*LGRRKL
Trigger: CAACTTCCTCCGGCCAAGCCAGGTGCGCCATTTATA...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCATCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCTCTCTTGTCCCACCATaGAAATTCTATGACCAACTC +
Preference number: 4 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLSLVPP*KFYDQL
Trigger: GAGTTGGTCATAGAATTTCCATGGTGGGACAAGAGA...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAAGTATTAGTTGGAGCTaGCGGATACTGATATGGTCG +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLSISWS*RILIWS
Trigger: CGACCATATCAGTATCCGTCAGCTCCAACTAATACT...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAGACCATCCCCACCGATaGTCACTTCAAATTCATACT +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLDHPHR*SLQIHT
Trigger: AGTATGAATTTGAAGTGATCATCGGTGGGGATGGTC...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCCCTCCTGTCATACCTaGCATAAATGCCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMPSCHT*HKCQGL
Trigger: TAACCCCTGGCATTTATGGCAGGTATGACAGGAGGG...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGTCATGTTTTCTGTGCTaGCCTCCTGTCATACCTGCC +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMSCFLC*PPVIPA
Trigger: GGCAGGTATGACAGGAGGGCAGCACAGAAAACATGA...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATGCGTCCTCCTAATTTaGATAATAATTCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTCVLLI*IIIQEP
Trigger: AGGCTCCTGAATTATTATGCAAATTAGGAGGACGCA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTAGCTTCATTTCAACGTaGAAACACAGGAAAAACACG +
Preference number: 4 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSSFIST*KHRKNT
Trigger: CGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTAAAGCTTTCCATAAATaGCTAGAAGGGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFKAFHK*LEGKGT
Trigger: CGTCCCCTTCCCTTCTAGGCATTTATGGAAAGCTTT...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACATGAGCTGGGTTCATaGTCTCATGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKHELGS*SHASSP
Trigger: AGGAGAGGAAGCATGAGACCATGAACCCAGCTCATG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACCAAGTCAATACCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKPSQYL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGTATTGACTTGG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGAGAGCCACTAGTAACTaGTGTCCGTTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRRATSN*CPFCSR
Trigger: GCGGGAGCAGAACGGACACCAGTTACTAGTGGCTCT...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp GGAGGCCATTTCTTTGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: GGHFFACHDGRNAQFLLSMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...GCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGAGGGAAGCAGAGTTCTaGATGAGGATGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMREAEF*MRMHHQ
Trigger: CTGATGGTGCATCCTCATCCAGAACTCTGCTTCCCT...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTGAAAGTCAGCAAACCTaGCGTCATTCAGGAATAACC +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFESQQT*RHSGIT
Trigger: GGTTATTCCTGAATGACGCCAGGTTTGCTGACTTTC...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACATCAGGATCCGAACTATaGAACCTCATGGTTATCGGG +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTSGSEL*NLMVIG
Trigger: CCCGATAACCATGAGGTTCCATAGTTCGGATCCTGA...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp TTAATTGACAAAAAGGGTTTGAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LIDKKGLKRLSV*PGCQLHFNVQT
Trigger: TGTTTGCACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
3UTR CAA 72 bp CTGTCATTAACTGTAAAGGTCCACACTGTGATTCCTTaGGGACACCACATTTTGAACTCCCGTGCTATACCA +
Preference number: 4 (lower is better)
Translates to: LSLTVKVHTVIP*GHHILNSRAIP
Trigger: TGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTGGACCTTTACAGTTAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp AATTCACCAGGCTCTCCATTTCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATAAATGGCGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: NSPGSPFPGEYL*FRQYHINGAPG
Trigger: GCCAGGTGCGCCATTTATATGATACTGGCGAAACAAAAGATATTCACCTGGAAATGGAGAGCCTGGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTATTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTATTCAAATTCATACTCTaGCACAGGATGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVFKFIL*HRMSLG
Trigger: CCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAA...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR TCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGTTTTCCAGGACATGGTaGGATCTGTCACGTTTACCC +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMFSRTW*DLSRLP
Trigger: GGGTAAACGTGACAGATCTCACCATGTCCTGGAAAA...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTATTTCTTTGCCTGTCATaGTGGGAGAAATGCCCAATT +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLFLCLS*WEKCPI
Trigger: AATTGGGCATTTCTCCCATCATGACAGGCAAAGAAA...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACACACTTGTTGCCCGAATaGAGAAATGTTGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTHLLPE*RNVALE
Trigger: CTCCAAAGCAACATTTCTTCATTCGGGCAACAAGTG...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACAATTTTTCTCTACCAGTaGTTCTGCCCATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTIFLYQ*FCPCSE
Trigger: CTCAGAGCATGGGCAGAATCACTGGTAGAGAAAAAT...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATATGGAGTGCAGTGGTGTaGTCTCGACTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: YQRRKGYLFHASHKILPIWSAVV*SRLTAT
Trigger: GGTTGCAGTAAGTCGAGATCACACCACTGCACTCCA...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGGGTTCATGGTCTCATaGTTCCTCTCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRGFMVS*FLSSML
Trigger: CAGCATGGAGGAGAGGAAGCATGAGACCATGAACCC...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACATTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR GCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTATTCTTGGGGGTGTGCTaGCCATTTTCTGAGACACCC +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLFLGVC*PFSETP
Trigger: GGGTGTCTCAGAAAATGGGCAGCACACCCCCAAGAA...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAACCTGCGTTCCTAGTCTaGTCTTGGGGCCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKPAFLV*SWGPFL
Trigger: CAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAAAAGAGGACATGAGCTaGGTTCATGGTCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKKEDMS*VHGLML
Trigger: AAGCATGAGACCATGAACCCAGCTCATGTCCTCTTT...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAATCAGGGCGGTATCTATaGATAATTGCACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKSGRYL*IIAQRA
Trigger: GGCCCTTTGTGCAATTATCCATAGATACCGCCCTGA...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: LSSPHNALARHCREHKGDMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CCA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCCAGCAAACACCTTCTaGAAAGCGTTCTTGGACCTT +
Preference number: 4 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMPANTF*KAFLDL
Trigger: AAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGG...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACACCCAGACTAATAAGGTaGTGCTCTCTCCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTPRLIR*CSLQLN
Trigger: ATTCAGTTGGAGAGAGCACCACCTTATTAGTCTGGG...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
3UTR CAA 72 bp AGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTaGCTGCCCCACTGCCTCTCACAATTTATAAATTAC +
Preference number: 4 (lower is better)
Translates to: SLPGMSLLHYMN*LPHCLSQFINY
Trigger: GTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR TCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACCGATACTGTACTGGCTaGAGTTCTTACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHRYCTG*SSYSHS
Trigger: AGAATGTGAGTAAGAACTTCAGCCAGTACAGTATCG...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp CACATTTTGCTCATCCAAAGAATCAAAATCTATCAGGTCAGGGCGGTATCTATGCCACTGCGCCCAGCATaGATGCTAGTTTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: HILLIQRIKIYQVRAVSMPLRPA*MLVLKS
Trigger: AGATTTTAAAACTAGCATTCATGCTGGGCGCAGTGG...CATAGATACCGCCCTGACCTGATAGATTTTGATTCTTTGGATGAGCAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACTTGTCCAGCAAACTCTaGTTTTTGGCTGTCATAACG +
Preference number: 4 (lower is better)
Translates to: FIQLSSPHNALARHCREHLSSKL*FLAVIT
Trigger: CGTTATGACAGCCAAAAAGCAGAGTTTGCTGGACAA...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR GCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTAGACTAATAAGGTGGTaGTCTCTCCAACTGAATGTA +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFRLIRW*SLQLNV
Trigger: TACATTCAGTTGGAGAGAGCACCACCTTATTAGTCT...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACACTTTCTTGGTGGTTTTaGTCTTTAACCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTLSWWF*SLTTLP
Trigger: TGGCAGTGTGGTTAAAGAGCAAAACCACCAAGAAAG...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTAATGTTCCAGTGTCTTaGAGAAAAGAGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFNVPVS*RKELKM
Trigger: CATCTTCAGCTCTTTTCTGCAAGACACTGGAACATT...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAAATTCCACATTGACGTaGATTTCAATGCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLNSTLT*ISMPRI
Trigger: GATCCTAGGCATTGAAATCCACGTCAATGTGGAATT...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGCCAAGTCAATACCTGTaGCTTCCCTCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRPSQYL*LPSVPG
Trigger: TCCAGGAACTGAGGGAAGCCACAGGTATTGACTTGG...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAAAACGCTTCCGAGAGATaGTCTGGCCAAGTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRENASER*SGQVCL
Trigger: TAAGCAAACTTGGCCAGACCATCTCTCGGAAGCGTT...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAATTTCCTTTTTATCCTTaGGAGAACGCTTCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: IQLSSPHNALARHCREHKFPFYP*ENASER
Trigger: TCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAA...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAATACTTCACTTTGTTCTaGTTCCCAACGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCREYFTLF*FPTATS
Trigger: GGACGTTGCCGTTGGGAACCAGAACAAAGTGAAGTA...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTATCGATAGCAGTAGTGTaGCTTACAGTAGAATTTACC +
Preference number: 4 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLSIAVV*LTVEFT
Trigger: GGTAAATTCTACTGTAAGCCACACTACTGCTATCGA...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAGAAAATAATCCCTTTTaGGGATTTCCTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPENNPF*GFPFSA
Trigger: GGCAGAGAAAGGAAATCCCCAAAAGGGATTATTTTC...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATAACCCAGCAGTTTGCTTaGACGAGCTACAGACTCATT +
Preference number: 4 (lower is better)
Translates to: YQRRKGYLFHASHKILPITQQFA*TSYRLI
Trigger: AATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGT...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp ATAGCAGTAGTGTGGCTTACAGTAGAATTTACCATCCTCGATGTCGTAGGCGTATTCCACTTTAGCTTCTaGTGTTGTATTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IAVVWLTVEFTILDVVGVFHFSF*CCISVD
Trigger: ATCAACCGAAATACAACAGCAGAAGCTAAAGTGGAA...TACGCCTACGACATCGAGGATGGTAAATTCTACTGTAAGCCACACTACTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR GCA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGAACTTGCTGCCCCACTaGCTCTCACAATTTATAAAT +
Preference number: 4 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKNLLPH*LSQFIN
Trigger: ATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTT...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR GCA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAAGCTGGGTCAAACACTaGCCAGTCATAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLSWVKH*PVIALP
Trigger: TGGTAAAGCTATGACTGGGCAGTGTTTGACCCAGCT...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAAGACAGGAAACTAACGTaGTTCTCCCCGTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKDRKLT*FSPSIS
Trigger: AGAGATGGACGGGGAGAAGCACGTTAGTTTCCTGTC...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTATGTCAAAGGCCAGTTaGTTATTCTTCTCCACATTT +
Preference number: 4 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFMSKAS*LFFSTF
Trigger: AAATGTGGAGAAGAATAACCAACTGGCCTTTGACAT...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAAGAAAGGATGCAACTCTaGGAACCTCTCGTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKERMQL*EPLVEG
Trigger: GCCTTCAACGAGAGGTTCCCAGAGTTGCATCCTTTC...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR TCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTTGGAATTCCACATTaGCGTGGATTTCAATGCCTA +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRELGIPH*RGFQCL
Trigger: TAGGCATTGAAATCCACGTCAATGTGGAATTCCAAG...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR TCA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAATCTAGGGAGGATGGCTaGGTTACACACAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKSREDG*VTHKRI
Trigger: GATTCTCTTGTGTGTAACTCAGCCATCCTCCCTAGA...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR GCA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAATGTAGTCTTTGTGACTaGCCCGTTTGTCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: KFIQLSSPHNALARHCRECSLCD*PVCPIL
Trigger: CAAAATTGGACAAACGGGGCAGTCACAAAGACTACA...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGATCCGTTCATTCTCTTaGTCCTCAGGAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: IKFIQLSSPHNALARHCRIRSFS*SSGGCI
Trigger: TATACAGCCTCCTGAGGACCAAGAGAATGAACGGAT...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CCA 90 bp AGAATCTTAAGTGAAGGTGAACCCAAAACAAGACCACGGGGCTTAATCAACACATCCCTACTTCATTTTTaGTCATCAACCGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: RILSEGEPKTRPRGLINTSLLHF*SSTVSD
Trigger: ATCTGATACGGTTGATGACCAAAAATGAAGTAGGGA...TGTGTTGATTAAGCCCCGTGGTCTTGTTTTGGGTTCACCTTCACTTAAGATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGGGTGCTGAGGACGCCTaGCGGGGCCTGGGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAGAEDA*RGLGAP
Trigger: AGGCGCCCCCAGGCCCCGCAAGGCGTCCTCAGCACC...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGCCACTGCGGGACGCCTaGGAGGGGCCAGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GRPGSPRGAASSSPGAGAPLRDA*EGPGLC
Trigger: GCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTGG...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp GCAGGGCACAGGTGCCGCCGTGGCTGCTCGCACAACCCCTGCAGCTaGGATCCCGCCCAGTTAGCCTCGGGGGCTGCACAGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AGHRCRRGCSHNPCS*DPAQLASGAAQPSP
Trigger: GGGGCTGGGCTGTGCAGCCCCCGAGGCTAACTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGCCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp GTGCCCGCAGGGCACAGGTGCCGCCGTGGCTGCTCGCACAACCCCTaGAGCTGCGATCCCGCCCAGTTAGCCTCGGGGGCTGCACAGCCC +
Preference number: 5 (lower is better)
Translates to: VPAGHRCRRGCSHNP*SCDPAQLASGAAQP
Trigger: GGGCTGTGCAGCCCCCGAGGCTAACTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGCCCTGCGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSAAPGG*DATAWP
Trigger: TGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LLGQGRVARLLGARPAGRSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCTGGGCTCGGGCCCCTaGCTGCGGTCCACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPLGSGP*LRSTGV
Trigger: CACACCTGTGGACCGCAGCAAGGGGCCCGAGCCCAG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCCTTGGCCAGGGGCGGGTGGCGAGGCTTCTCGGGGCGCGGCCAGCAGGACGGTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: LLGQGRVARLLGARPAGRCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...CCGTCCTGCTGGCCGCGCCCCGAGAAGCCTCGCCACCCGCCCCTGGCCAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGCCTGGAAGCCCACGGGGTGCAGCATCCTCAAGCCCAGGGGCGGGAGCGAGTGGGGTGGATGTTTaGGCCGGGGCAGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GRPGSPRGAASSSPGAGASGVDV*AGAGWK
Trigger: CTTCCAGCCTGCCCCGGCCAAAACATCCACCCCACT...CGCTCCCGCCCCTGGGCTTGAGGATGCTGCACCCCGTGGGCTTCCAGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGCGGCTCCGGGTGGTTaGGATGCCACTGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGAAPGG*DATAWP
Trigger: TGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGCGCAGGCCTGCGGCTCTGCGGCGCCTCTCTGCAAAGGCTCGGGTCCACCTTCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: GRRPAALRRLSAKARVHLRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...AAGGTGGACCCGAGCCTTTGCAGAGAGGCGCCGCAGAGCCGCAGGCCTGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGGTGTCACTTTGGCTTaGGACAGGGAGAGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSGVTLA*DRERGQ
Trigger: CTGGCCCCTCTCCCTGTCCAAAGCCAAAGTGACACC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCTTCCAGGGTCCCACCTaGCACCCTCTTGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSFQGPT*HPLGLC
Trigger: ACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGAA...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp ACGGCTCTGCCGCCCACCGGACGGCCCCATCACTGGGCCACAGCCTaGCAGTGGAACTCCCCTCTGATTTGCACCAGCACCTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: TALPPTGRPHHWATA*QWNSPLICTSTSDR
Trigger: CCTGTCGGAGGTGCTGGTGCAAATCAGAGGGGAGTTCCACTGGCAGGCTGTGGCCCAGTGATGGGGCCGTCCGGTGGGCGGCAGAGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS CCA 90 bp CCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCACGCCTGAACCTGCGGGACAAGCAC +
Preference number: 5 (lower is better)
Translates to: PARSALGCPSVAWRC*APPGRSRLNLRDKH
Trigger: GTGCTTGTCCCGCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGTTAAGCTCCTCCTGCTaGGCCTGTCTCCGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPLSSSC*ACLRAA
Trigger: GGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAA...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS GCA 90 bp CTTGCCCATGCCTGCCGAGAGAACGCTTGTGTCGGGTGCAGGGAGTaGCGCGCCCACCCTGGCCCGCAGGAATCACACGGGGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: LAHACRENACVGCRE*RAHPGPQESHGANV
Trigger: CACATTTGCCCCGTGTGATTCCTGCGGGCCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 90 bp AGTCTCTGCTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCTGAGTCTCCTCCGGTACCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: SLCWRRPPRRPCPAR*SGCARPESPPVPPA
Trigger: TGCAGGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGAGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS GCA 90 bp TCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATaGTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGCGGGACAAG +
Preference number: 5 (lower is better)
Translates to: SPARSALGCPSVAWR*WAPPGRSRLNLRDK
Trigger: CTTGTCCCGCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS CCA 90 bp CCGAGAGAACGCTTGTGTCGGGTGCAGGGAGTGCCGCGCCCACCCTaGCCCGCAGGAATCACACGGGGCAAATGTGCAAAGAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PRERLCRVQGVPRPP*PAGITRGKCAKRAE
Trigger: CTCGGCCCTCTTTGCACATTTGCCCCGTGTGATTCCTGCGGGCCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CCA 90 bp GGTAGTTCTCCAGCTCGATCCGCTCTGGGGTGCCCCTCAGTCGCTTaGCGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGCGG +
Preference number: 5 (lower is better)
Translates to: GSSPARSALGCPSVA*RCWAPPGRSRLNLR
Trigger: CCGCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGATCGAGCTGGAGAACTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS CCA 90 bp AATGGGGCTCCGGAGACCGTCTCCAGCCAGGCCTGCACCGCCGCGTaGCGTATGGAGGGAAGGTCGGGCACTTCACTGGACTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NGAPETVSSQACTAA*RMEGRSGTSLDSSS
Trigger: GGAGGAAGAGTCCAGTGAAGTGCCCGACCTTCCCTCCATACGCCACGCGGCGGTGCAGGCCTGGCTGGAGACGGTCTCCGGAGCCCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578984.1
CDS CCA 90 bp GTGAGGCGGGAGGAGGCGTCTGCTGCTGGAGTGGCCCCAGGATCCTaGCCTGGCAGAAGGGGCTTCCTTCTTCCGAGGCAGGTCAAACCC +
Preference number: 5 (lower is better)
Translates to: VRREEASAAGVAPGS*PGRRGFLLPRQVKP
Trigger: GGGTTTGACCTGCCTCGGAAGAAGGAAGCCCCTTCTGCCAGGCCAGGATCCTGGGGCCACTCCAGCAGCAGACGCCTCCTCCCGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCGCTCTCCAAGGCCACTaGAGGCCTCTGCCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: RVSDMRAEVAGAAESSSAALQGH*RPLPLG
Trigger: CCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGC...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCAGTGGGGTGGATGTTTaGGCCGGGGCAGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRSGVDV*AGAGWK
Trigger: CTTCCAGCCTGCCCCGGCCAAAACATCCACCCCACT...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGCTCGCCTTCCGGCTTaGGCAGGCCCAGCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: VSLLWGQQELQGPKAALPARLPA*AGPAFW
Trigger: CCAAAAGGCTGGGCCTGCCAAAGCCGGAAGGCGAGC...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCCACAGGGACTTGGGTTaGGCGGCGGCTTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPHRDLG*AAASSR
Trigger: CCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTG...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTCTCCGAGCTGCCTTTaGCACACGCCGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQASPSCL*HTPGQL
Trigger: AAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCCTGGCGCCACTGGCCTaGCAGTTCTGTGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRLAPLA*QFCVPG
Trigger: CCCTGGGACACAGAACTGCAAGGCCAGTGGCGCCAG...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS GCA 90 bp AACTACTGCTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTaGTCAGGTTGTGCTCGGCCTGAGTCTCCTCCGGTACCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: NYCWRRPPRRPCPAR*SGCARPESPPVPPA
Trigger: TGCAGGAGGTACCGGAGGAGACTCAGGCCGAGCACAACCTGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGTAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp CCTCCTCCTCCTCTCCCTCCTCCTCCATCTCAGACTCGGAACTACTaGTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PPPPLPPPPSQTRNY*WRRPPRRPCPARCS
Trigger: TGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGTAGTTCCGAGTCTGAGATGGAGGAGGAGGGAGAGGAGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp GCCTTACCCCACTCACCTTCCACTGCCATGCGTTCCCGGAGCTCCTaGTGCAGTCGACTCTGCCGGTCTTCCAGCTCCAGCTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: ALPHSPSTAMRSRSS*CSRLCRSSSSSSRA
Trigger: TGCCCGGGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTGGGGTAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 90 bp ACCCACCCTGGCCTCCATGGGTGCCTTACCCCACTCACCTTCCACTaGCATGCGTTCCCGGAGCTCCTGCTGCAGTCGACTCTGCCGGTC +
Preference number: 5 (lower is better)
Translates to: THPGLHGCLTPLTFH*HAFPELLLQSTLPV
Trigger: GACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTGGGGTAAGGCACCCATGGAGGCCAGGGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS-3UTR CAA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCTTAAGGCTGAAGCCCTaGGACAGCATGGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPLRLKP*DSMAAS
Trigger: GGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAA...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGGGCAGGCCCAGCCTTTaGGGGATGGACAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEGRPSL*GMDRGL
Trigger: CAAGCCTCTGTCCATCCCCAAAAGGCTGGGCCTGCC...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCACACGCCGGGTCAGCTaGGCATTCAGTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QELQGPKAALPGLDRFCGTRRVS*AFSSSS
Trigger: GGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGT...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp GAACCACTCCTGCATCAGCTTGGGGTCGTCCTTCTTGCCCATGCCTaGCGAGAGAACGCTTGTGTCGGGTGCAGGGAGTGCCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: EPLLHQLGVVLLAHA*RENACVGCRECRAH
Trigger: GTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGATGCAGGAGTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 90 bp AGGAGTTTGAGACCATCCTGGGCAACCATGGGGAGACCCAGTCTCTaGTGGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RSLRPSWATMGRPSL*WRRPPRRPCPARCS
Trigger: TGAGCAGCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGAGACTGGGTCTCCCCATGGTTGCCCAGGATGGTCTCAAACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS GCA 90 bp TCATTCTCATCCAATGGGGCTCCGGAGACCGTCTCCAGCCAGGCCTaGACCGCCGCGTGGCGTATGGAGGGAAGGTCGGGCACTTCACTG +
Preference number: 5 (lower is better)
Translates to: SFSSNGAPETVSSQA*TAAWRMEGRSGTSL
Trigger: CAGTGAAGTGCCCGACCTTCCCTCCATACGCCACGCGGCGGTGCAGGCCTGGCTGGAGACGGTCTCCGGAGCCCCATTGGATGAGAATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578984.1
CDS GCA 90 bp CCCTGGCCTCCATGGGTGCCTTACCCCACTCACCTTCCACTGCCATaGGTTCCCGGAGCTCCTGCTGCAGTCGACTCTGCCGGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PWPPWVPYPTHLPLP*VPGAPAAVDSAGLP
Trigger: TGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTGGGGTAAGGCACCCATGGAGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 90 bp CCCAGGCTCTTGTTTCACAGATGCTGTGAGGCGGGAGGAGGCGTCTaGTGCTGGAGTGGCCCCAGGATCCTGGCCTGGCAGAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: PRLLFHRCCEAGGGV*CWSGPRILAWQKGL
Trigger: AAGCCCCTTCTGCCAGGCCAGGATCCTGGGGCCACTCCAGCAGCAGACGCCTCCTCCCGCCTCACAGCATCTGTGAAACAAGAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp CTGCAACCACAGCCGCGCTCCCTGTTGCTCCATCCATCCCATCTGTaGGGCGGCCTTGTGCGGAGCTGTGCTTCCCAAGCCTACAGGCGA +
Preference number: 5 (lower is better)
Translates to: LQPQPRSLLLHPSHL*GGLVRSCASQAYRR
Trigger: TCGCCTGTAGGCTTGGGAAGCACAGCTCCGCACAAGGCCGCCCCACAGATGGGATGGATGGAGCAACAGGGAGCGCGGCTGTGGTTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCAGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGSSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCCGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCGGGCAGCCCCGGACCAGGTCGCGTAGGACGCACCAGATGCCGCTGTGGCTCCGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: PGSPGPGRVGRTRCRCGSAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...GGAGCCACAGCGGCATCTGGTGCGTCCTACGCGACCTGGTCCGGGGCTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCATGTGTCGCTGCCTCCCAGGTTCTGCGGGAACTCCTTCTTCATGGAGCCCTGGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ACVAASQVLRELLLHGALVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...CAGGGCTCCATGAAGAAGGAGTTCCCGCAGAACCTGGGAGGCAGCGACACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATCTCTGCCCCTCGGGTTaGCAGCCTGTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNLCPSG*QPVFLS
Trigger: GGACAGAAACACAGGCTGCAAACCCGAGGGGCAGAG...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATCCTCGGCCAACTCCTaGGCTTCCGCGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPSSANS*ASADTK
Trigger: CTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCGCTTCTTCTAGGAGGTaGGAGCTGGGCTTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRASSRR*ELGFSG
Trigger: CCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGC...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGGCTTCTTCTAGGAGGTaGGAGCTGGGCTTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEASSRR*ELGFSG
Trigger: CCCGGAGAAGCCCAGCTCCAACCTCCTAGAAGAAGC...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGGTGCTGGGGCAGGACTaGTCGTCGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEVLGQD*SSAFFF
Trigger: GAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCAC...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGCAAACTGTTTCCCTGTaGTGGGGCCAGCAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQAQTVSL*WGQQEL
Trigger: TAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTG...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp AGTGCCGCGCCCACCCTGGCCCGCAGGAATCACACGGGGCAAATGTaGAAAGAGGGCCGAGCAAGATGCTGCCGGAACTTCCACTCCCAA +
Preference number: 5 (lower is better)
Translates to: SAAPTLARRNHTGQM*KEGRARCCRNFHSQ
Trigger: TTGGGAGTGGAAGTTCCGGCAGCATCTTGCTCGGCCCTCTTTGCACATTTGCCCCGTGTGATTCCTGCGGGCCAGGGTGGGCGCGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 90 bp TGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCGGCTTCACTGGACTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CTSAWISRGSAACMT*WSLWFPASLDSSSS
Trigger: GGAGGAGGAAGAGTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS GCA 90 bp CCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGTCGACTCTaGCGGTCTTCCAGCTCCAGCTCCCGGGCAAAGATCATCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSTAMRSRSSCCSRL*RSSSSSSRAKIISS
Trigger: GGAGCTGATGATCTTTGCCCGGGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 90 bp TTACCCCACTCACCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTaGAGTCGACTCTGCCGGTCTTCCAGCTCCAGCTCCCGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LPHSPSTAMRSRSSC*SRLCRSSSSSSRAK
Trigger: CTTTGCCCGGGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTGGGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS CCA 90 bp ACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCTTCACTGGACTCTTCCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: TSAWISRGSAACMTC*SLWFPASLDSSSSS
Trigger: CGAGGAGGAGGAAGAGTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS-3UTR CAA 90 bp GGGGTGGGCATGACTGGACGCCCCCATCCTGGGTCTCGATCGCACCCTGACCCCAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GVGMTGRPHPGSRSHPDPRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...GGGGTCAGGGTGCGATCGAGACCCAGGATGGGGGCGTCCAGTCATGCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp ACCATCCTCGATGTCGTAGGCGTAGGCCGAGAGGCGCAGGGTGGTGGCGCAGTAGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TILDVVGVGREAQGGGAVAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...TACTGCGCCACCACCCTGCGCCTCTCGGCCTACGCCTACGACATCGAGGATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: VSLLWGQQELQGPKAALPCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAGCCTCCCGTTCTCCTaGGCCAGGGGCGGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKSLPFS*ARGGWR
Trigger: TCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGCT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATTAAGCTCCTCCTGCTaGGCCTGTCTCCGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPLSSSC*ACLRAA
Trigger: GGCAGCTCGGAGACAGGCCAAGCAGGAGGAGCTTAA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 90 bp TCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTGCATaGCCTGCTGGAGCCTCTGGTTCCCGGCTTCACTGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SSARQPGSPEDPPRA*PAGASGSRLHWTLP
Trigger: AGGAAGAGTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS TCA 90 bp AGGTGCTGGCTCATGCCCTTGGCCTTGTCACAGAGGCCGAGGGAGTaGCGCGCCACCCAGCCAAACAAGGAAGTGAGGCTACCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: RCWLMPLALSQRPRE*RATQPNKEVRLPGV
Trigger: AACCCCAGGTAGCCTCACTTCCTTGTTTGGCTGGGTGGCGCGTCACTCCCTCGGCCTCTGTGACAAGGCCAAGGGCATGAGCCAGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS TCA 90 bp GTGTGCCTGAGGTGGTGGTCAGCCACAGGAGCTGACATTCTGCTGTaGATCTGGATGCGGGGTGGCAGGGTACCCAGGCCACACCCTGGT +
Preference number: 5 (lower is better)
Translates to: VCLRWWSATGADILL*IWMRGGRVPRPHPG
Trigger: ACCAGGGTGTGGCCTGGGTACCCTGCCACCCCGCATCCAGATTCACAGCAGAATGTCAGCTCCTGTGGCTGACCACCACCTCAGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp CCTGCACCGCCGCGTGGCGTATGGAGGGAAGGTCGGGCACTTCACTaGACTCTTCCTCCTCCTCGTCATAGTCCTCCTCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PAPPRGVWREGRALH*TLPPPRHSPPPPPL
Trigger: AAGAGGAGGAGGAGGAGGACTATGACGAGGAGGAGGAAGAGTCCAGTGAAGTGCCCGACCTTCCCTCCATACGCCACGCGGCGGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578984.1
CDS-3UTR CAA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAACAGAAAATGGAGCGTaGGGTGGGAGCTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: RGSGWFGCHCLARRMPTETENGA*GGSSGP
Trigger: TGGTCCTGAGCTCCCACCCAACGCTCCATTTTCTGT...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGAAAGCAGCTCGGCCAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RVSDMRAEVAGAAESSSASSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...GGCCGAGCTGCTTTCAGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCACATCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGCTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: AHPQGARGVVPCVMPYTPLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...CGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLLGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AGATCCGGCACAAGGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCCGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RSGTRQVPVAFGRKGGSRRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...GCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCCTTGTGCCGGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQAAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGGCTCTCCAAGGCCACTaGAGGCCTCTGCCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWALQGH*RPLPLG
Trigger: CCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGC...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGGGGACCACCGAGGCATaGGGCTCGGCCTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: QATLQTVSLLWGQQELQGGTTEA*GSASLS
Trigger: GCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCC...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGGTGCTGAGGACGCCTaGCGGGGCCTGGGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQGAEDA*RGLGAP
Trigger: AGGCGCCCCCAGGCCCCGCAAGGCGTCCTCAGCACC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 90 bp GACGAGGAGGTTCAGGCTCTGGCCTCTCATGGTGGGGGCTCTGCTTaGCACGGTTGTCAGCATCAAGATCCCTGTATGTCTGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: DEEVQALASHGGGSA*HGCQHQDPCMSAGR
Trigger: GCGGCCAGCAGACATACAGGGATCTTGATGCTGACAACCGTGGCAAGCAGAGCCCCCACCATGAGAGGCCAGAGCCTGAACCTCCTCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CCA 90 bp ACTCTCGCCGGGACTTCTGTGAGGACTTCTCAAGGACATCGTCGCTaGAGAGGTCTGAGTCCTCGGAGAAGCTCAGCTGGCGCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: TLAGTSVRTSQGHRR*RGLSPRRSSAGAGA
Trigger: AGCTCCGGCGCCAGCTGAGCTTCTCCGAGGACTCAGACCTCTCCAGCGACGATGTCCTTGAGAAGTCCTCACAGAAGTCCCGGCGAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS CCA 90 bp GCTGTGAATCTGGATGCGGGGTGGCAGGGTACCCAGGCCACACCCTaGTGGGCTGCAGGGCTCAAGAGGCAGCTGCGTTGCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: AVNLDAGWQGTQATP*WAAGLKRQLRCLYL
Trigger: TAAATACAAGCAACGCAGCTGCCTCTTGAGCCCTGCAGCCCACCAGGGTGTGGCCTGGGTACCCTGCCACCCCGCATCCAGATTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: AESPRVPPRVPVLPSAESSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CCTGCGTTCCTAGTCTGCTCTTGGGGCCCTTTCTTGGGGGTGTGCTGCCCATTTCGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: PAFLVCSWGPFLGVCCPFRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAACGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp GAGCGTTGGGTGGGAGCTCAGGACCAGTTAAGGCTGAAGCCCTTGGACAGCATGTCCTCGGCCAACTCCTaGGCTTCCGCGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: ERWVGAQDQLRLKPLDSMSSANS*ASADTK
Trigger: CTTGGTGTCCGCGGAAGCCAAGGAGTTGGCCGAGGA...CATGCTGTCCAAGGGCTTCAGCCTTAACTGGTCCTGAGCTCCCACCCAACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCACACAGGGACTTGGGTTaGGCGGCGGCTTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPHRDLG*AAASSR
Trigger: CCTAGAAGAAGCCGCCGCCAAACCCAAGTCCCTGTG...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGTATGTGCTGACTGCTTaGATGGACAAGCACCCCACC +
Preference number: 5 (lower is better)
Translates to: GRCPSPSEGRAGVADLLEYVLTA*MDKHPT
Trigger: GGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATA...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGATGACACAGGTTCTTaGCTCCTTTGCAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGDDTGS*LLCSWD
Trigger: ATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCTTCTTGCCCATGCCTGCTTCGCCCCGGAGCGCCTTCTCCACAGCCACGCCCCAAGAAAAGGAGACCTTaGCCTCACGTGAGAACAGGT +
Preference number: 5 (lower is better)
Translates to: PSCPCLLRPGAPSPQPRPKKRRP*PHVRTG
Trigger: ACCTGTTCTCACGTGAGGCAAAGGTCTCCTTTTCTT...GGGGCGTGGCTGTGGAGAAGGCGCTCCGGGGCGAAGCAGGCATGGGCAAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS GCA 90 bp GATGGCAAAATCCAGAGACGGCAGCTGCTGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCTGAGCAGAGCCTCCTGGTCCACGTT +
Preference number: 5 (lower is better)
Translates to: DGKIQRRQLLLGREV*RLPGIAEQSLLVHV
Trigger: AACGTGGACCAGGAGGCTCTGCTCAGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGATTTTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS GCA 90 bp GCCCTCGCTCAGGCTGACTCCATACCATGCGGAAGTCAGGTCAGCTaGCCGTGGCTCGGTTGTCTCCCATGTCATCTGTCTCCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: ALAQADSIPCGSQVS*PWLGCLPCHLSPRL
Trigger: CAACCTAGGAGACAGATGACATGGGAGACAACCGAGCCACGGGCAGCTGACCTGACTTCCGCATGGTATGGAGTCAGCCTGAGCGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp GCACAGCCAACCCAGGCAGTAGGTGCTTCATGGATGGAGAAGCAGTaGGCATACTACCCACCACAGCAACGTGAGGGAGGTGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: AQPTQAVGASWMEKQ*AYYPPQQREGGGWP
Trigger: TGGCCACCCACCTCCCTCACGTTGCTGTGGTGGGTAGTATGCCCACTGCTTCTCCATCCATGAAGCACCTACTGCCTGGGTTGGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp GTGAATCTGGATGCGGGGTGGCAGGGTACCCAGGCCACACCCTGGTaGGCTGCAGGGCTCAAGAGGCAGCTGCGTTGCTTGTATTTAAAG +
Preference number: 5 (lower is better)
Translates to: VNLDAGWQGTQATPW*AAGLKRQLRCLYLK
Trigger: CTTTAAATACAAGCAACGCAGCTGCCTCTTGAGCCCTGCAGCCCACCAGGGTGTGGCCTGGGTACCCTGCCACCCCGCATCCAGATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLSSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGGGGCTGGACCGGTTTTGTGGCTCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: QELQGPKAALPGLDRFCGSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...GCCACAAAACCGGTCCAGCCCCGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCCGAAGGCGGCTCTGCCGTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: VSLLWGQQELQGPKAALPSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...CGGCAGAGCCGCCTTCGGCCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: QRLPPACTEERSVRQPKNTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...ATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGTTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: GLLRSRLRVVWMPLPGQAFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...CGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AAGGCAGAGGCTGCCCCCGGCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAAATCGGCTGAACACTTaGAAGCCTTCGCTGATACTG +
Preference number: 5 (lower is better)
Translates to: KAEAAPGMHGGAVCEAAQNRLNT*KPSLIL
Trigger: CAGTATCAGCGAAGGCTTCAAAGTGTTCAGCCGATT...TTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGCCGGGGGCAGCCTCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAAGCCTCCCGTTCTCCTaGGCCAGGGGCGGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPSLPFS*ARGGWR
Trigger: TCGCCACCCGCCCCTGGCCAAGGAGAACGGGAGGCT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCACGGATATGAGTCCAGTGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCAGTGACGACCTCTTCTaGCTCTTCCCACTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LTDMSPVHVSLDLQRIRRSDDLF*LFPLEP
Trigger: GGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCACT...GCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGACTCATATCCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CGCGGCTCCGGGTGGTTTGGATGCCACTGCCTGGCCAGGCGGATGCCAACAGAAGAGCGTCTTGCCAGGTaGTCAGCTTCATTTCAACGT +
Preference number: 5 (lower is better)
Translates to: RGSGWFGCHCLARRMPTEERLAR*SASFQR
Trigger: ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTC...TTCTGTTGGCATCCGCCTGGCCAGGCAGTGGCATCCAAACCACCCGGAGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGAGTCCTAGCTTCTGGCAGGGTCACTGGCTGTGATCGGATGGGAGAGTGCACAGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: GVLASGRVTGCDRMGECTGAGPV*WHSRRG
Trigger: ACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCC...TGTGCACTCTCCCATCCGATCACAGCCAGTGACCCTGCCAGAAGCTAGGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp TCCTCAGGGAGCGCGCGGGGTGGTCCCCTGCGTCATGCCATACACGCCGTGCTGAAGAAGAGTCTATCATaGCTGGTCAAAATCGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSGSARGGPLRHAIHAVLKKSLS*LVKIGL
Trigger: CAGGCCGATTTTGACCAGCAATGATAGACTCTTCTT...CAGCACGGCGTGTATGGCATGACGCAGGGGACCACCCCGCGCGCTCCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGGTGCCCGTCGCCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGACAGACCCATTCCCTTaGTGGGTCAGATGTTACCAC +
Preference number: 5 (lower is better)
Translates to: GRCPSPSEGRAGVADLLETDPFP*WVRCYH
Trigger: GTGGTAACATCTGACCCACAAAGGGAATGGGTCTGT...CTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGGCGACGGGCACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTGCTAATCCTCTCCTGTaGGGCTCTCGTACCGCCGCC +
Preference number: 5 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSANPLL*GSRTAA
Trigger: GGCGGCGGTACGAGAGCCCAACAGGAGAGGATTAGC...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS CCA 90 bp TGCAGCTGGCTCCCTCAGCCACGTGCACTTCATAGCTCCGTGGGGTaGCGACATAGACTGGCAGTTACCTGGTACTTCAACACCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CSWLPQPRALHSSVG*RHRLAVTWYFNTLC
Trigger: GCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGAGCCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498345.1
CDS CCA 90 bp GCTCAGGCTGACTCCATACCATGCGGAAGTCAGGTCAGCTGCCCGTaGCTCGGTTGTCTCCCATGTCATCTGTCTCCTAGGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AQADSIPCGSQVSCP*LGCLPCHLSPRLAF
Trigger: GAAGGCCAACCTAGGAGACAGATGACATGGGAGACAACCGAGCCACGGGCAGCTGACCTGACTTCCGCATGGTATGGAGTCAGCCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGGGCATGACTGGACGCTATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: ACPHLHVSCDAGVGMTGRYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...GCGTCCAGTCATGCCCACCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGCTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp TGTCCTCCACATCATCAGCAAAGGGAATCTCCTCCACGCTCTCCACAAACGACTGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CPPHHQQRESPPRSPQTTVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...AGTCGTTTGTGGAGAGCGTGGAGGAGATTCCCTTTGCTGATGATGTGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CAGAAAGCTGTGAGGAGGACCCACACAGGGGTTCTGGGCAGCTCCCTGATGCCAGTCCTTGGTGTCACTTaGGCTTTGGACAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QKAVRRTHTGVLGSSLMPVLGVT*ALDRER
Trigger: CCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGAC...TGGCATCAGGGAGCTGCCCAGAACCCCTGTGTGGGTCCTCCTCACAGCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCCTGGGCTCGGGCCCCTaGCTGCGGTCCACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCLGSGP*LRSTGV
Trigger: CACACCTGTGGACCGCAGCAAGGGGCCCGAGCCCAG...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGGCAGGCCCAGCCTTTaGGGGATGGACAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTGRPSL*GMDRGL
Trigger: CAAGCCTCTGTCCATCCCCAAAAGGCTGGGCCTGCC...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGGCGGAGTCCGAGGTGTaGAAGCTCTGGCTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTAESEV*KLWLPS
Trigger: ACTGGGCAGCCAGAGCTTCAACACCTCGGACTCCGC...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCTCCTCCCAGGAGGTGGAGCCGTCTCAGATAACCACTGTCACCTGGGGCTCCATTTCTCCTGCAGGCTaGAGTCCTCAGTCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: ASSQEVEPSQITTVTWGSISPAG*SPQSCR
Trigger: ACGACAAGACTGAGGACTCAAGCCTGCAGGAGAAAT...GGAGCCCCAGGTGACAGTGGTTATCTGAGACGGCTCCACCTCCTGGGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCTCTGTCAGCATCCGACGGGCTGTCAGACCAGTGCTGATCATCATCCAGCTCTCTCCGAGCTGCCTTTaGCACACGCCGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LSVSIRRAVRPVLIIIQLSPSCL*HTPGQL
Trigger: AAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGA...GAGCTGGATGATGATCAGCACTGGTCTGACAGCCCGTCGGATGCTGACAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTCCACTGCGGGACGCCTaGGAGGGGCCAGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSPLRDA*EGPGLC
Trigger: GCAGAGGCCTGGCCCCTCCAAGGCGTCCCGCAGTGG...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCCCCGTCCATCTCTGGCCGGTAATGAACCCGGTGATGAGCACTCGGGGAAAAGCAGTGGCGTGTTCCTaGGCACAGCTAATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LPVHLWPVMNPVMSTRGKAVACS*AQLILS
Trigger: GGAGAGGATTAGCTGTGCCAAGGAACACGCCACTGC...TTTTCCCCGAGTGCTCATCACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS GCA 90 bp GGGTGGCGACATAGACTGGCAGTTACCTGGTACTTCAACACCCTCTaGTTGAGACACTCAGCCAGCTCCTTGGCCCTGGGCTCAGCAACA +
Preference number: 5 (lower is better)
Translates to: GWRHRLAVTWYFNTL*LRHSASSLALGSAT
Trigger: TGTTGCTGAGCCCAGGGCCAAGGAGCTGGCTGAGTGTCTCAAGCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462645.1
ENST00000465886.1
ENST00000498345.1
CDS GCA 90 bp GGCTCACCAAGTACCAGCCTTGGCACAGCCAACCCAGGCAGTAGGTaGTTCATGGATGGAGAAGCAGTGGGCATACTACCCACCACAGCA +
Preference number: 5 (lower is better)
Translates to: GSPSTSLGTANPGSR*FMDGEAVGILPTTA
Trigger: TGCTGTGGTGGGTAGTATGCCCACTGCTTCTCCATCCATGAAGCACCTACTGCCTGGGTTGGCTGTGCCAAGGCTGGTACTTGGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp ACACATGCAGCTGGCTCCCTCAGCCACGTGCACTTCATAGCTCCGTaGGGTGGCGACATAGACTGGCAGTTACCTGGTACTTCAACACCC +
Preference number: 5 (lower is better)
Translates to: THAAGSLSHVHFIAP*GGDIDWQLPGTSTP
Trigger: GGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGAGCCAGCTGCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498345.1
CDS CCA 90 bp GCTTGGCCTGTCTCCGAGCTGCCTTTTGCACACGCCGGGTCAGCTTaGCATTCAGTTCCTCCTCCGTGTAGGTTCTTGGCTTTGATGCAC +
Preference number: 5 (lower is better)
Translates to: AWPVSELPFAHAGSA*HSVPPPCRFLALMH
Trigger: GTGCATCAAAGCCAAGAACCTACACGGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGTGCAAAAGGCAGCTCGGAGACAGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577821.5
ENST00000580469.1
CDS-3UTR CAA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATTAAGGCTGAAGCCCTaGGACAGCATGGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPLRLKP*DSMAAS
Trigger: GGAGGCTGCCATGCTGTCCAAGGGCTTCAGCCTTAA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGACCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCGGCCTGAGTCTCCTCCGGTACCTCCTGCAGTGCCTCAGCCTGCCTCAGGGAAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: LGLSLLRYLLQCLSLPQGRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...TCCCTGAGGCAGGCTGAGGCACTGCAGGAGGTACCGGAGGAGACTCAGGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CAAGGGCGGCGGGACCACCGAGGCATTGGGCTCGGCCTCCCTGAGCTTCCTCCGCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: QGRRDHRGIGLGLPELPPPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...CGGAGGAAGCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCCGCCGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp AGTGCTCACCAGGGTCGGTCTTTCTCCTCTGTGGCCCCGAGGAGCTTCCTCCTCTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: SAHQGRSFSSVAPRSFLLSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...GAGGAGGAAGCTCCTCGGGGCCACAGAGGAGAAAGACCGACCCTGGTGAGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CCTTCGGAAGGAAGGGCGGGAGTCGCTGATCTGCTTGAGAGGCACCAGCCTGCAACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: PSEGRAGVADLLERHQPATEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...TGCAGGCTGGTGCCTCTCAAGCAGATCAGCGACTCCCGCCCTTCCTTCCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: TLKPSLILEALGCRAVDIRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGGAGGGGGCATCAGCTTaGGGCTTCTCTTTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGEGASA*GFSLGS
Trigger: GCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCTC...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGGCGGAGTCCGAGGTGTaGAAGCTCTGGCTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWAESEV*KLWLPS
Trigger: ACTGGGCAGCCAGAGCTTCAACACCTCGGACTCCGC...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CACACTCCTTCCAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGTTCCAGGGTCCCACCTaGCACCCTCTTGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: HTPSKPLCKLFPCCGASRFQGPT*HPLGLC
Trigger: ACACAGGCCAAGAGGGTGCAAGGTGGGACCCTGGAA...CCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTGGAAGGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 90 bp AAAGCTCGACTGGAAGCCTTGATGAAGGCACACTCTCCCTGTCCCTaGGAAGGCGCAGATCCCAACCCTAACTCAGTTGCTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KARLEALMKAHSPCP*EGADPNPNSVAGLA
Trigger: AGCCAGGCCAGCAACTGAGTTAGGGTTGGGATCTGCGCCTTCTCAGGGACAGGGAGAGTGTGCCTTCATCAAGGCTTCCAGTCGAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 90 bp TTGAGTGACCATGTGCTTGTGGAAATTCAGCCCACTTCTTCCTGCTaGATGCTCCGGGGGAGTAGAAGTGGGGTGCGGGAGGAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: LSDHVLVEIQPTSSC*MLRGSRSGVREERG
Trigger: CCCCCTTTCCTCCCGCACCCCACTTCTACTCCCCCGGAGCATTCAGCAGGAAGAAGTGGGCTGAATTTCCACAAGCACATGGTCACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 90 bp TGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCGGCTTTAAATGTCCTCAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: CTSAWISRGSAACMT*WSLWFPALNVLKSS
Trigger: AGAAGATTTGAGGACATTTAAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS CCA 90 bp TCTTCATGGAGCCCTCAGCCACGTGCACTTCATAGCTCCGTGGGGTaGCGACATAGACTGGCAGTTACCTGGTACTTCAACACCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SSWSPQPRALHSSVG*RHRLAVTWYFNTLC
Trigger: GCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGCTCCATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462645.1
ENST00000465886.1
CDS CCA 90 bp CTCCTTCTTCATGGAGCCCTCAGCCACGTGCACTTCATAGCTCCGTaGGGTGGCGACATAGACTGGCAGTTACCTGGTACTTCAACACCC +
Preference number: 5 (lower is better)
Translates to: LLLHGALSHVHFIAP*GGDIDWQLPGTSTP
Trigger: GGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGCTCCATGAAGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462645.1
ENST00000465886.1
CDS CCA 90 bp GAGCCTCTGGTTCCCGGCTTTAAATGTCCTCAAATCTTCTTCCTGTaGGAGGTACCTGGCGCCACTGGCCTTGCAGTTCTGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: EPLVPGFKCPQIFFL*EVPGATGLAVLCPR
Trigger: CCTGGGACACAGAACTGCAAGGCCAGTGGCGCCAGGTACCTCCCACAGGAAGAAGATTTGAGGACATTTAAAGCCGGGAACCAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTELGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTESLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: ACTEERSVRQPKNESRQRHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CTGGGGCTCCCCACTGCACGCGGGACTCGACCACTTTCCAAGCAGCACACGGGCAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: LGLPTARGTRPLSKQHTGNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...GCCCGTGTGCTGCTTGGAAAGTGGTCGAGTCCCGCGTGCAGTGGGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTETEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTAGCTGGCCCCACGCTCTaGTGTCAGCTGTCTCCGTAT +
Preference number: 5 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLAGPTL*CQLSPY
Trigger: ATACGGAGACAGCTGACACAAGAGCGTGGGGCCAGC...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CAA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGGCTTTGGGCTTCTCTTaGGGGAGCAAAGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QATLQTVSLLWGQQELQGALGFS*GSKGSG
Trigger: CCCTGAGCCTTTGCTCCCCAAAGAGAAGCCCAAAGC...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGGGACCACCGAGGCATaGGGCTCGGCCTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ARLSASFQRANTGKTRRKGTTEA*GSASLS
Trigger: GCTCAGGGAGGCCGAGCCCAATGCCTCGGTGGTCCC...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCACTGCGTCCTCCTAATTaGCATAATAATTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPLRPPN*HNNSGA
Trigger: GGCTCCTGAATTATTATGCAAATTAGGAGGACGCAG...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKKRLSV*PGCQLH
Trigger: ATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AGGGTCCAGTGTGTGGTGTTCGGCTGGAGGGCAGACCCCTCCTGCGTCCTCCTAAAGAAGAGTCTATCATaGCTGGTCAAAATCGGCCTG +
Preference number: 5 (lower is better)
Translates to: RVQCVVFGWRADPSCVLLKKSLS*LVKIGL
Trigger: CAGGCCGATTTTGACCAGCAATGATAGACTCTTCTT...TAGGAGGACGCAGGAGGGGTCTGCCCTCCAGCCGAACACCACACACTGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TCAGGGAAAAGGCGCTCCTCAGGTGATTTCTCCTGGGTGGCGGCAGGGACAGGTACAGACCCATTCCCTTaGTGGGTCAGATGTTACCAC +
Preference number: 5 (lower is better)
Translates to: SGKRRSSGDFSWVAAGTGTDPFP*WVRCYH
Trigger: GTGGTAACATCTGACCCACAAAGGGAATGGGTCTGT...ACCTGTCCCTGCCGCCACCCAGGAGAAATCACCTGAGGAGCGCCTTTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGGAGTCCAGAGGGTTTaGGGCCACTTGTTGCCCGAA +
Preference number: 5 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGGVQRV*GHLLPE
Trigger: TTCGGGCAACAAGTGGCCCAAAACCCTCTGGACTCC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTGGGACAGGTGAGGGCTaGGACCTCATGACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRAGTGEG*DLMTSP
Trigger: TGGGCTTGTCATGAGGTCCAAGCCCTCACCTGTCCC...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp CCTTTGGCTTTAGTTCCAGGTGGTCACAGAGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGGTGGCCTGGACAAACCGGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: PLALVPGGHRAPGKP*GFPCRWWPGQTGQR
Trigger: TCTTTGACCGGTTTGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCTCTGTGACCACCTGGAACTAAAGCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000424046.1
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 90 bp GCATACTACCCACCACAGCAACGTGAGGGAGGTGGGTGGCCAAGCTaGCACAATAGGTTGAATGTCCACACTGTCACCACTGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: AYYPPQQREGGGWPS*HNRLNVHTVTTEAV
Trigger: CACTGCCTCAGTGGTGACAGTGTGGACATTCAACCTATTGTGTCAGCTTGGCCACCCACCTCCCTCACGTTGCTGTGGTGGGTAGTATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 90 bp ACGTCAGGCAGCAGCAGGAGCCTCTTCTCATTCCATCACACCTTGTaGAGAGCCGCTCTGAGGGTCAAGGTGAGTCACATCTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: TSGSSRSLFSFHHTL*RAALRVKVSHICSC
Trigger: ACAAGAGCAGATGTGACTCACCTTGACCCTCAGAGCGGCTCTGCACAAGGTGTGATGGAATGAGAAGAGGCTCCTGCTGCTGCCTGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp GCACTTCATAGCTCCGTGGGGTGGCGACATAGACTGGCAGTTACCTaGTACTTCAACACCCTCTGCTTGAGACACTCAGCCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALHSSVGWRHRLAVT*YFNTLCLRHSASSL
Trigger: CAAGGAGCTGGCTGAGTGTCTCAAGCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462645.1
ENST00000465886.1
ENST00000498345.1
CDS CCA 90 bp AGAGGGTTTTGGGCCACTTGTTGCCCGAATGAAGAAATGTTGCTTTaGAGGTGCTGGCTCATGCCCTTGGCCTTGTCACAGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RGFWATCCPNEEMLL*RCWLMPLALSQRPR
Trigger: CCTCGGCCTCTGTGACAAGGCCAAGGGCATGAGCCAGCACCTCCAAAGCAACATTTCTTCATTCGGGCAACAAGTGGCCCAAAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS CCA 90 bp CCACATAGAAACCCAGGGGAATTCTCAGCTCAGCCCCAGTGCAACTaGGAAAGCTCGACTGGAAGCCTTGATGAAGGCACACTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PHRNPGEFSAQPQCN*ESSTGSLDEGTLSL
Trigger: CAGGGAGAGTGTGCCTTCATCAAGGCTTCCAGTCGAGCTTTCCCAGTTGCACTGGGGCTGAGCTGAGAATTCCCCTGGGTTTCTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGTATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTTATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: AESPRVPPRVPVLPSAESYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TCCAAGGAGGTGCCAGGCCTCCTCAGATCGCGGCTCCGGGTGGTTTGGATGCCATGTAGTATCACTCCTTaGTCCAGCAAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SKEVPGLLRSRLRVVWMPCSITP*SSKLCF
Trigger: AAAGCAGAGTTTGCTGGACAAAGGAGTGATACTACA...TGGCATCCAAACCACCCGGAGCCGCGATCTGAGGAGGCCTGGCACCTCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCATGCACGGAGGAGCGGTCTGTGAGGCAGCCCAAGAATGAATCTAGGCAGAGGCTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: ACTEERSVRQPKNESRQRLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...CCTCTGCCTAGATTCATTCTTGGGCTGCCTCACAGACCGCTCCTCCGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCLGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGCGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTENPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAATCGGCTGAACACTTaGAAGCCTTCGCTGATACTG +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTENRLNT*KPSLIL
Trigger: CAGTATCAGCGAAGGCTTCAAAGTGTTCAGCCGATT...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGCCATCAGTGACAGCTTaGGAACTGCAGACACCAAGG +
Preference number: 5 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWPSVTA*ELQTPR
Trigger: CCTTGGTGTCTGCAGTTCCAAAGCTGTCACTGATGG...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AAATGCTCTCCAAGGCCACTTGAGGCCTCTGCCCCTCGGGTTTGCAGCCTGTGTCTACATTACATGAACTaGCTGCCCCACTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: KCSPRPLEASAPRVCSLCLHYMN*LPHCLS
Trigger: TGAGAGGCAGTGGGGCAGCAAGTTCATGTAATGTAG...ACACAGGCTGCAAACCCGAGGGGCAGAGGCCTCAAGTGGCCTTGGAGAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGGTGTCACTTTGGCTTaGGACAGGGAGAGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQGVTLA*DRERGQ
Trigger: CTGGCCCCTCTCCCTGTCCAAAGCCAAAGTGACACC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGTCGGCCTTCTTCTTCTaGTCCTTCTTGTACCCGGAG +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKSAFFF*SFLYPE
Trigger: CTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGA...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCAACACGCCGGGTCAGCTaGGCATTCAGTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPTRRVS*AFSSSS
Trigger: GGAGGAGGAACTGAATGCCAAGCTGACCCGGCGTGT...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGGCACATTCTCACAGCTaGAGAACGCTTGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKAHSHS*RTLDAG
Trigger: TCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGC...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 90 bp GTTCCTCCGACCATCCCCACCGATGATCACTTCAAATTCATACTCTaGCACAGGATGAGTCTTGGGGTGCACCAGTGCCCGCCAGCCTAT +
Preference number: 5 (lower is better)
Translates to: VPPTIPTDDHFKFIL*HRMSLGVHQCPPAY
Trigger: ATAGGCTGGCGGGCACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAAGTGATCATCGGTGGGGATGGTCGGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS GCA 90 bp AGTCCAGAGGGTTTTGGGCCACTTGTTGCCCGAATGAAGAAATGTTaGTTTGGAGGTGCTGGCTCATGCCCTTGGCCTTGTCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: SPEGFGPLVARMKKC*FGGAGSCPWPCHRG
Trigger: GCCTCTGTGACAAGGCCAAGGGCATGAGCCAGCACCTCCAAAGCAACATTTCTTCATTCGGGCAACAAGTGGCCCAAAACCCTCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS-3UTR CAA 90 bp CTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGCTTGAGAACGAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LSERKPAWSCAHSHSLRTRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...CGTTCTCAAGCTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGCCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: WGEWTAGSRKDRRPPFTEPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...CTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGACCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TCCTTCTTCATGGAGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCTATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SFFMEPCLRMPMDCAGAFYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...GAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp TCCTTCTTCATGGAGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: SFFMEPCLRMPMDCAGAFKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...GAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCTCCATGAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCAGTCTTAAGGTGATCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTGCAGCTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: LSLKVIFHCHAFPELLLQLGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...CTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGATCACCTTAAGACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS-3UTR CAA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AATGAATCTAGGCAGAGGGTGTCTGACATGAGGGCTGAGGTGGCGGGTGCAGCTATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: NESRQRVSDMRAEVAGAAMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...AGCTGCACCCGCCACCTCAGCCCTCATGTCAGACACCCTCTGCCTAGATTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: HSGESGASMGALDREAEFFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGTCCTTGGTGTCACTTaGGCTTTGGACAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AACGPPRYSASSLVSLESVLGVT*ALDRER
Trigger: CCTCTCCCTGTCCAAAGCCAAAGTGACACCAAGGAC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGACTTCCACAGGGACTaGGGTTTGGCGGCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSDFHRD*GLAAAS
Trigger: AGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGTGCTGGGGCAGGACTaGTCGTCGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSVLGQD*SSAFFF
Trigger: GAAGAAGAAGGCCGACGACAAGTCCTGCCCCAGCAC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCGGGGCTGGACCGGTTTaGTGGCATTCGAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCGAGPV*WHSRRG
Trigger: ACCTCTCCTCGAATGCCACAAAACCGGTCCAGCCCC...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGGCACATTCTCACAGCTaGAGAACGCTTGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: QATLQTVSLLWGQQELQGAHSHS*RTLDAG
Trigger: TCCTGCGTCAAGCGTTCTCAAGCTGTGAGAATGTGC...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCCCCGTCCATCTCTGGCCGGTAATGAACCCGGTGATGAGCACTCGGGGAAAAGTGGGAACCCTAGGGTaGAATGAAATTCTACTGCCT +
Preference number: 5 (lower is better)
Translates to: LPVHLWPVMNPVMSTRGKVGTLG*NEILLP
Trigger: AGGCAGTAGAATTTCATTCAACCCTAGGGTTCCCAC...TTTTCCCCGAGTGCTCATCACCGGGTTCATTACCGGCCAGAGATGGACGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTGTTCACCTCCCAACACAAGGAAGTGGTCATGAAAGTGGGACAGGTGAGGGCTAGAAAAGTGAACCCCTaGGTGCCCTGCTCGGACCTT +
Preference number: 5 (lower is better)
Translates to: LFTSQHKEVVMKVGQVRARKVNP*VPCSDL
Trigger: AAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCT...AGCCCTCACCTGTCCCACTTTCATGACCACTTCCTTGTGTTGGGAGGTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp TGTCAGCACAGGCGCTGCCATACATACCACCCAGATGCAAGTCGATaGGGTCACTGTAATAAGACTCTCCCCAATAGTCTGCTTCGCCCC +
Preference number: 5 (lower is better)
Translates to: CQHRRCHTYHPDASR*GHCNKTLPNSLLRP
Trigger: GGGGCGAAGCAGACTATTGGGGAGAGTCTTATTACAGTGACCTCATCGACTTGCATCTGGGTGGTATGTATGGCAGCGCCTGTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584751.1
CDS-3UTR CAA 90 bp GGAGGCCATTTCTTTGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GGHFFACHDGRNAQFLLSSSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...GCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGTCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATAGGGAGCCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: EAFADTGSPGVQGSGYREPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...CTCCCTATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGATGTAGTATCACTCCTTaGTCCAGCAAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRCSITP*SSKLCF
Trigger: AAAGCAGAGTTTGCTGGACAAAGGAGTGATACTACA...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383094.7
ENST00000414725.6
CDS-3UTR CAA 90 bp CACAGTGGGGAGAGTGGGGCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGTAGTATCACTCCTTaGTCCAGCAAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HSGESGASMGALDREAEFCSITP*SSKLCF
Trigger: AAAGCAGAGTTTGCTGGACAAAGGAGTGATACTACA...GAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGCCCCACTCTCCCCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414725.6
CDS-3UTR CAA 90 bp CAAGCCACTTTGCAAACTGTTTCCCTGTTGTGGGGCCAGCAGGAGCTACAAGGGCTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: QATLQTVSLLWGQQELQGLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...CCCTTGTAGCTCCTGCTGGCCCCACAACAGGGAAACAGTTTGCAAAGTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCAAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGCGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CGATGCTGGGCTCCTCCAGGCCGTTCACGCCTGAACCTGGGGTTCTCTCAGTGGCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: RCWAPPGRSRLNLGFSQWPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...CCACTGAGAGAACCCCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CTGGGCCGTGAACCACCTGGAGCTGTATGTGGGACATTCAGAACACCCAGCAGTAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: LGREPPGAVCGTFRTPSSNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...ACTGCTGGGTGTTCTGAATGTCCCACATACAGCTCCAGGTGGTTCACGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTACACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGCTCTGCCCCTCGGGTTaGCAGCCTGTGTTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLLCPSG*QPVFLS
Trigger: GGACAGAAACACAGGCTGCAAACCCGAGGGGCAGAG...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGCTTTGGGCTTCTCTTaGGGGAGCAAAGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPALGFS*GSKGSG
Trigger: CCCTGAGCCTTTGCTCCCCAAAGAGAAGCCCAAAGC...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAGAGGGGGCATCAGCTTaGGGCTTCTCTTTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTEGASA*GFSLGS
Trigger: GCTCCCCAAAGAGAAGCCCAAAGCTGATGCCCCCTC...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTGCTACGTCTGGCCACTTACAGCAGATCCCTAGGCCACACTCCTTCCAAGCCATGGGACGACTGGGGTTaGAAGATGGAATCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: LLRLATYSRSLGHTPSKPWDDWG*KMESRN
Trigger: GTTTCTAGATTCCATCTTCAAACCCCAGTCGTCCCA...TGGCTTGGAAGGAGTGTGGCCTAGGGATCTGCTGTAAGTGGCCAGACGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 90 bp GAACTCCTTCTTCATGGAGCCCTGGATGTGTCAGATACAGTTGGATaGAAGCCAGCAGCCACTTTAGCTGAGGAGTGTGCCACAGACCTC +
Preference number: 5 (lower is better)
Translates to: ELLLHGALDVSDTVG*KPAATLAEECATDL
Trigger: GAGGTCTGTGGCACACTCCTCAGCTAAAGTGGCTGCTGGCTTTCATCCAACTGTATCTGACACATCCAGGGCTCCATGAAGAAGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498345.1
CDS TCA 90 bp GTGCTTTTGCCATTTGGTTATTGGGTTGATTTCTCCTTGTTTTTGTaGGCAGGGACTGGGAAGCGTGGGTGGAGAAAGGGCGTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VLLPFGYWVDFSLFL*AGTGKRGWRKGVSG
Trigger: CCCGCTGACGCCCTTTCTCCACCCACGCTTCCCAGTCCCTGCTCACAAAAACAAGGAGAAATCAACCCAATAACCAAATGGCAAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584751.1
CDS GCA 90 bp CACACCTTGTGCAGAGCCGCTCTGAGGGTCAAGGTGAGTCACATCTaGTCTTGTGGTCTCACCAGCCATATTAAACGGCTGAAAGGCATT +
Preference number: 5 (lower is better)
Translates to: HTLCRAALRVKVSHI*SCGLTSHIKRLKGI
Trigger: AATGCCTTTCAGCCGTTTAATATGGCTGGTGAGACCACAAGAGCAGATGTGACTCACCTTGACCCTCAGAGCGGCTCTGCACAAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp AGTCCACATCTTCCTCTAGGTCATTCTCATCCAATGGGGCTTCACTaGACTCTTCCTCCTCCTCGTCATAGTCCTCCTCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPHLPLGHSHPMGLH*TLPPPRHSPPPPPL
Trigger: AAGAGGAGGAGGAGGAGGACTATGACGAGGAGGAGGAAGAGTCCAGTGAAGCCCCATTGGATGAGAATGACCTAGAGGAAGATGTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498573.5
CDS-3UTR CAA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCTTCTCCTGCACTAGCTaGAACCACTCCTGCATCAGC +
Preference number: 5 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLFSCTS*NHSCIS
Trigger: GCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGAA...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTTCTCCTGCACTAGCTaGAACCACTCCTGCATCAGC +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQFSCTS*NHSCIS
Trigger: GCTGATGCAGGAGTGGTTCAAGCTAGTGCAGGAGAA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGTGCAGCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: GAAESSSAQQTPSGKRSWRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...CCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CTCAGTGGCTTGATGAGCTGTACACAGCCAGGCTGGTGCGGAACCGTGAGAAAGAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: LSGLMSCTQPGWCGTVRKRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...CTTTCTCACGGTTCCGCACCAGCCTGGCTGTGTACAGCTCATCAAGCCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 5 (lower is better)
Translates to: TLKPSLILEALGCRAVDIRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACTTTGAAGCCTTCGCTGATACTGGAAGCCCTGGGGTGCAGGGCAGTGGATATACTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: TLKPSLILEALGCRAVDILGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...TATATCCACTGCCCTGCACCCCAGGGCTTCCAGTATCAGCGAAGGCTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGCGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACCGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: ASMGALDREAEFWMRMHHNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTGCCCCTCCACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: CLRFFGGAPGSMKKTVPLHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...GAGGGGCACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGAGAAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: GENGLRAAGKTGGLPSLRNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...TCTCAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGAATCACCCAGAGTCCCTCCCCGTGTGCCCGTCCTTCCCTCTGCTGAATCTAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: AESPRVPPRVPVLPSAESNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...AGATTCAGCAGAGGGAAGGACGGGCACACGGGGAGGGACTCTGGGTGATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: AACGPPRYSASSLVSLESTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCTGAAAGCAGCTCGGCCCAGCAAACACCTTCTGGAAAGCGTTCTTGGACCTTAACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: AESSSAQQTPSGKRSWTLTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...TAAGGTCCAAGAACGCTTTCCAGAAGGTGTTTGCTGGGCCGAGCTGCTTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTATTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTELATA*ARPFAS
Trigger: AGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCCAGGCCCAAAGCTCTTaGAGGCCTCTAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCQAQSS*RPLAPL
Trigger: AAGAGGAGCTAGAGGCCTCAAAGAGCTTTGGGCCTG...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAAGTGACGACCTCTTCTaGCTCTTCCCACTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTSDDLF*LFPLEP
Trigger: GGGCTCCAGTGGGAAGAGCAAGAAGAGGTCGTCACT...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAGACTTCCACAGGGACTaGGGTTTGGCGGCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ARLSASFQRANTGKTRRKDFHRD*GLAAAS
Trigger: AGAAGCCGCCGCCAAACCCAAGTCCCTGTGGAAGTC...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCGAACTCCCCTCTGATTaGCACCAGCACCTCCGACAG +
Preference number: 5 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLELPSD*HQHLRQ
Trigger: CTGTCGGAGGTGCTGGTGCAAATCAGAGGGGAGTTC...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp TCCGACGAAACCCTTCCAAGGTGTTCCTCCGACCATCCCCACCGATaGTCACTTCAAATTCATACTCTGACACAGGATGAGTCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SDETLPRCSSDHPHR*SLQIHTLTQDESWG
Trigger: ACCCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAAGTGATCATCGGTGGGGATGGTCGGAGGAACACCTTGGAAGGGTTTCGTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS CCA 90 bp TTTGCCTCCTTCAACTTTGAGCACTTGTGTCCCGCCTGCCTCAGGTaGACCCACCTCTCCCACAAATCAGAGCAAGAGAATGTTGTTATG +
Preference number: 5 (lower is better)
Translates to: FASFNFEHLCPACLR*THLSHKSEQENVVM
Trigger: CATAACAACATTCTCTTGCTCTGATTTGTGGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp GCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAAAAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ARLSASFQRANTGKTRRKSSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...TTTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp ACTGGGGAGAATGGACTGCGGGCAGCAGGAAAGACAGGAGGCCTCCCTTCACTGCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: TGENGLRAAGKTGGLPSLPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...CAGTGAAGGGAGGCCTCCTGTCTTTCCTGCTGCCCGCAGTCCATTCTCCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383094.7
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAACGTTGGCCCGTCCGTTaGCATCTGTGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKRWPVR*HLWWRH
Trigger: ATGGCGCCACCACAGATGCAAACGGACGGGCCAACG...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCAGCTGGCCCCACGCTCTaGTGTCAGCTGTCTCCGTAT +
Preference number: 5 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPAGPTL*CQLSPY
Trigger: ATACGGAGACAGCTGACACAAGAGCGTGGGGCCAGC...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACACAGGCCCAAAGCTCTTaGAGGCCTCTAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTQAQSS*RPLAPL
Trigger: AAGAGGAGCTAGAGGCCTCAAAGAGCTTTGGGCCTG...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTTCGGCCTTCTTCTTCTaGTCCTTCTTGTACCCGGAG +
Preference number: 5 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPSAFFF*SFLYPE
Trigger: CTCCGGGTACAAGAAGGACAAGAAGAAGAAGGCCGA...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGCATAATAATTCAGGAGCCTGCCCGCACCTCCATGTCTCCTGTGATGCTGGGGTGCTTTCGTGGGGTATaGTTTACGTTTCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: CIIIQEPARTSMSPVMLGCFRGV*FTFLWW
Trigger: CCACCAAAGAAACGTAAACAATACCCCACGAAAGCA...CCCCAGCATCACAGGAGACATGGAGGTGCGGGCAGGCTCCTGAATTATTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAACACGGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAAAGCGGCTGAGCGTCTaGCCAGGTTGTCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: KHGGKGHLLSRHKCGTGTKRLSV*PGCQLH
Trigger: ATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTT...TGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCCGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGATTGACAAAAAGGGTTaGAAGCGGCTGAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWIDKKG*KRLSVL
Trigger: CAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAAT...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGGATGACACAGGTTCTTaGCTCCTTTGCAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQDDTGS*LLCSWD
Trigger: ATCCCAGCTGCAAAGGAGCAAAGAACCTGTGTCATC...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCAAAAGATAGGAGTGGGCTCAAACGGCTAACTCAGTGGAGCCAGACAGGAGACTCTGGGAACCTCTCGTaGAAGGCCAAATGGGTAATT +
Preference number: 5 (lower is better)
Translates to: PKDRSGLKRLTQWSQTGDSGNLS*KAKWVI
Trigger: AATTACCCATTTGGCCTTCAACGAGAGGTTCCCAGA...GTCTCCTGTCTGGCTCCACTGAGTTAGCCGTTTGAGCCCACTCCTATCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTCGGGAGAAAAGTGAACCCCTTGGTGCCCTGCTCGGACCTTAAAGGCTATGGTGCAGCAGGTACAGATTaGGTTACCAGAGAAAGACAA +
Preference number: 5 (lower is better)
Translates to: LGRKVNPLVPCSDLKGYGAAGTD*VTRERQ
Trigger: TTGTCTTTCTCTGGTAACCAAATCTGTACCTGCTGC...ACCATAGCCTTTAAGGTCCGAGCAGGGCACCAAGGGGTTCACTTTTCTCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS GCA 90 bp AACAAGCCGGTTCAGAAAAAGAGACAGATGATTTCCCGAAGCGGCTaGAAAAAGCCCACAGGAACTATGGACCACACCCTAAGGAACAGC +
Preference number: 5 (lower is better)
Translates to: NKPVQKKRQMISRSG*KKPTGTMDHTLRNS
Trigger: GCTGTTCCTTAGGGTGTGGTCCATAGTTCCTGTGGGCTTTTTGCAGCCGCTTCGGGAAATCATCTGTCTCTTTTTCTGAACCGGCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp GAGAGGGCAAGTACACATGCAGGGTTATGGAGGTTAGGGAGGTTATaGAGGTTAGGGAGCTTATGGAGGTTAGGGAGGTTAAGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: ERASTHAGLWRLGRL*RLGSLWRLGRLRRL
Trigger: TAACCTCCTTAACCTCCCTAACCTCCATAAGCTCCCTAACCTCCATAACCTCCCTAACCTCCATAACCCTGCATGTGTACTTGCCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465886.1
CDS-3UTR CAA 90 bp GGCAGCTTCTGGACAGACAAGGATGACACAGGTTCTTTGCTCCTTTGCAGCTGGCCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: GSFWTDKDDTGSLLLCSWPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...CCAGCTGCAAAGGAGCAAAGAACCTGTGTCATCCTTGTCTGTCCAGAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TTTGGCCTCCTTTCCAGACAGGGGAGCCACTGCCGGTCTCTTCCTTTGTGCGTAGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: FGLLSRQGSHCRSLPLCVAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...TACGCACAAAGGAAGAGACCGGCAGTGGCTCCCCTGTCTGGAAAGGAGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACACGGAGGAAGTTGACGTaGATATTGGGATACCGAGTG +
Preference number: 5 (lower is better)
Translates to: SSPHNALARHCREHKGDTRRKLT*ILGYRV
Trigger: CACTCGGTATCCCAATATCAACGTCAACTTCCTCCG...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAATGGTCTGGCCAAGTTaGCTTAGGAAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: SSPHNALARHCREHKGDTMVWPS*LRKEIG
Trigger: CCCTATCTCCTTCCTAAGCAAACTTGGCCAGACCAT...TGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ACTTGCTCAGATGATAATAAGGGCACGTGCAGTAGCAGAAGCTGCGTTCACCTGGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: TCSDDNKGTCSSRSCVHLAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...CAGGTGAACGCAGCTTCTGCTACTGCACGTGCCCTTATTATCATCTGAGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGTGCCCCTCAGTCGCTaGGCGATGCTGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IKFIQLSSPHNALARHCRVPLSR*AMLGSS
Trigger: GGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCAC...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ATGCCAGGGGTTAGCCTTCCTGGAATGTCCTTGCTACATTACATGAACTTGCTGTTCCCAATGACAGACTaGGAGCTGGGGACATGTCAG +
Preference number: 5 (lower is better)
Translates to: MPGVSLPGMSLLHYMNLLFPMTD*ELGTCQ
Trigger: CTGACATGTCCCCAGCTCCAAGTCTGTCATTGGGAA...CAGCAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAGGCTAACCCCTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGTCCTTTTCCTTTTTATCCTTGGGAGAACGCTTCCGAGAGATGGTCTGGCCAACCATCAGTGACAGCTTaGGAACTGCAGACACCAAGG +
Preference number: 5 (lower is better)
Translates to: SPFPFYPWENASERWSGQPSVTA*ELQTPR
Trigger: CCTTGGTGTCTGCAGTTCCAAAGCTGTCACTGATGG...TTGGCCAGACCATCTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp GCCTCCATGGGTGCTCTGGATAGGGAAGCAGAGTTCTGGATGAGGATGCACCATCTTCCTGGAATGTCCTaGCTACATTACATGAACTTG +
Preference number: 5 (lower is better)
Translates to: ASMGALDREAEFWMRMHHLPGMS*LHYMNL
Trigger: CAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAG...ATGGTGCATCCTCATCCAGAACTCTGCTTCCCTATCCAGAGCACCCATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AGCCCTGTCTCCGTATGCCGATGGACTGTGCGGGCGCATTCTCTTCAAATTTGGCTTCCTGGAATGTCCTaGCTACATTACATGAACTTG +
Preference number: 5 (lower is better)
Translates to: SPVSVCRWTVRAHSLQIWLPGMS*LHYMNL
Trigger: CAAGTTCATGTAATGTAGCAAGGACATTCCAGGAAG...CCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGAGCGTCTTGCCAGGTaGTCAGCTTCATTTCAACGT +
Preference number: 5 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSERLAR*SASFQR
Trigger: ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTC...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTGTTCCTAGTCTGCTCTaGGGGCCCTTTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFVPSLL*GPFLGG
Trigger: ACCCCCAAGAAAGGGCCCCAAGAGCAGACTAGGAAC...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp GTGCCACCCAGCTGCCATTTCTTGATTGTGCCCAGTAAAGGGAATTaGACTACCATCAGTAAGTGCTGTTCACCAAAAGCACGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: VPPSCHFLIVPSKGN*TTISKCCSPKARQA
Trigger: TGCCTGACGTGCTTTTGGTGAACAGCACTTACTGATGGTAGTTCAATTCCCTTTACTGGGCACAATCAAGAAATGGCAGCTGGGTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 90 bp AAGAATAAATTTGCCTCCTTCAACTTTGAGCACTTGTGTCCCGCCTaGCTCAGGTGGACCCACCTCTCCCACAAATCAGAGCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: KNKFASFNFEHLCPA*LRWTHLSHKSEQEN
Trigger: ATTCTCTTGCTCTGATTTGTGGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp TCTTGTCTAGAAGGGCTTTGGGTTGTTCTTTCCTTTGAAGCTGATTaGCTATCTGCTCAGCCAATGAGCTCACTCCGCCCGTGTACATCT +
Preference number: 5 (lower is better)
Translates to: SCLEGLWVVLSFEAD*LSAQPMSSLRPCTS
Trigger: AGATGTACACGGGCGGAGTGAGCTCATTGGCTGAGCAGATAGCCAATCAGCTTCAAAGGAAAGAACAACCCAAAGCCCTTCTAGACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS-3UTR CAA 90 bp CCAAAACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCTCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: PKQNGNAPSSHEWSRWSSSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...GCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCCAAACTGAGACAAGGGCGAGTTCTGCAGAGCCGGAATTCTCACTGGGAGGGTCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: PKLRQGRVLQSRNSHWEGPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...ACCCTCCCAGTGAGAATTCCGGCTCTGCAGAACTCGCCCTTGTCTCAGTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACGGAGGCCATTTCTTaGCCTGTCATGATGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LSSPHNALARHCREHKGDTEAIS*PVMMGE
Trigger: TTCTCCCATCATGACAGGCAAAGAAATGGCCTCCGT...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGTTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: LPLTTHLLDTVGNTKVTQFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...CTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAATCCTGCAGGGGTCCTTaGGCCTCCTTTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKSCRGP*ASFPDR
Trigger: CCTGTCTGGAAAGGAGGCCAAAGGACCCCTGCAGGA...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTACCCCTCACAACGCACTaGCTAGACACTGTAGGGAAC +
Preference number: 5 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLPLTTH*LDTVGN
Trigger: GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGG...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTATTTCTCCTGCAGGCTaGAGTCCTCAGTCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSISPAG*SPQSCR
Trigger: ACGACAAGACTGAGGACTCAAGCCTGCAGGAGAAAT...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AACAGAACGGAAATGCACCCTCATCACATGAGTGGTCCAGATGGTCTAGCGCCATGCTTTCGTGGGGTATaGTTTACGTTTCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: NRTEMHPHHMSGPDGLAPCFRGV*FTFLWW
Trigger: CCACCAAAGAAACGTAAACAATACCCCACGAAAGCA...TGGCGCTAGACCATCTGGACCACTCATGTGATGAGGGTGCATTTCCGTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCATTGACAAAAAGGGTTaGAAGCGGCTGAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCIDKKG*KRLSVL
Trigger: CAAGACGCTCAGCCGCTTCAAACCCTTTTTGTCAAT...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TGCCAGGTTGTCAGCTTCATTTCAACGTGCAAACACAGGAAAAACACGGAGGAATATGTGCTGACTGCTTaGATGGACAAGCACCCCACC +
Preference number: 5 (lower is better)
Translates to: CQVVSFISTCKHRKNTEEYVLTA*MDKHPT
Trigger: GGTGGGGTGCTTGTCCATCAAAGCAGTCAGCACATA...TTCCTCCGTGTTTTTCCTGTGTTTGCACGTTGAAATGAAGCTGACAACCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCTGGGACGACTGGGGTTaGAAGATGGAATCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCWDDWG*KMESRN
Trigger: GTTTCTAGATTCCATCTTCAAACCCCAGTCGTCCCA...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TATGGCTCTTGGGGTAAGGTGGGAGGTAAGCTGGATTGTAGAATTCTCTTGCTCCATGGCTATAAAATGTaGGTCCCACCTGCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: YGSWGKVGGKLDCRILLLHGYKM*VPPAGY
Trigger: GTACCCTGCAGGTGGGACCAACATTTTATAGCCATG...GAGCAAGAGAATTCTACAATCCAGCTTACCTCCCACCTTACCCCAAGAGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACATCTTGGGGCCCTTTCTaGGGGGTGTGCTGCCCATTT +
Preference number: 5 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTSWGPF*GVCCPF
Trigger: AAATGGGCAGCACACCCCCAAGAAAGGGCCCCAAGA...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp GGGTTGTTCTTTCCTTTGAAGCTGATTGGCTATCTGCTCAGCCAATaGGCTCACTCCGCCCGTGTACATCTTTATATACTTCTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GLFFPLKLIGYLLSQ*AHSARVHLYILLSE
Trigger: CTCCGACAGAAGTATATAAAGATGTACACGGGCGGAGTGAGCTCATTGGCTGAGCAGATAGCCAATCAGCTTCAAAGGAAAGAACAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS GCA 90 bp CAAGACTTAAAACACGAGATTATTTTTCACGAAGTCACACAGGACTaGCTAGGTAGGAATCTGGGTGTGAAGATCCTAGCGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: QDLKHEIIFHEVTQD*LGRNLGVKILAAAS
Trigger: AGACGCCGCCGCTAGGATCTTCACACCCAGATTCCTACCTAGGCAGTCCTGTGTGACTTCGTGAAAAATAATCTCGTGTTTTAAGTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp ACTCCTTCTTCATGGAGCCCAGTTCCTTCTTGTCTAGAAGGGCTTTaGGTTGTTCTTTCCTTTGAAGCTGATTGGCTATCTGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TPSSWSPVPSCLEGL*VVLSFEADWLSAQP
Trigger: TGGCTGAGCAGATAGCCAATCAGCTTCAAAGGAAAGAACAACCCAAAGCCCTTCTAGACAAGAAGGAACTGGGCTCCATGAAGAAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS-3UTR CAA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGCCTTGAGGGTTCCCTaGCAGGTGGTGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: IKFIQLSSPHNALARHCRALRVP*QVVAWT
Trigger: TGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGC...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GGAGGAAAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTCCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: GGKGHLLSRHKCGTGTMPPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...AGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTTTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGTCATCTCCTGTCCCGACATAAATGTGGAACAGGGACAATGCCTGTCTGCCCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: KGHLLSRHKCGTGTMPVCPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...GCAGACAGGCATTGTCCCTGTTCCACATTTATGTCGGGACAGGAGATGACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp AAAGGGTTTGAAGCGGCTGAGCGTCTTGCCAGGTTGTCAGCTTCATTTCAACGTCCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: KGFEAAERLARLSASFQRPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...ACGTTGAAATGAAGCTGACAACCTGGCAAGACGCTCAGCCGCTTCAAACCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GGGGTATTGTTTACGTTTCTTTGGTGGTGCTCCAGGGAGCATGAAGAAGACAGTTATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: GVLFTFLWWCSREHEEDSYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...ACTGTCTTCTTCATGCTCCCTGGAGCACCACCAAAGAAACGTAAACAATACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GCTGCATGTGGACCTCCACGGTATTCAGCCTCCAGTTTAGTCAGCCTTGAGTCTGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: AACGPPRYSASSLVSLESAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...AGACTCAAGGCTGACTAAACTGGAGGCTGAATACCGTGGAGGTCCACATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGTGTAGTATCACTCCTTaGTCCAGCAAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQCSITP*SSKLCF
Trigger: AAAGCAGAGTTTGCTGGACAAAGGAGTGATACTACA...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACAACCCAGCAGTTTGCTaGAACGAGCTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: LSSPHNALARHCREHKGDNPAVC*NELQTH
Trigger: ATGAGTCTGTAGCTCGTTCAAGCAAACTGCTGGGTT...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AAAAAGCTCTTCTGTTCCTTTCCGGCTATGCCTTCGGCTTCCCTACTTCATTTTCACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: KKLFCSFPAMPSASLLHFHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...AAAATGAAGTAGGGAAGCCGAAGGCATAGCCGGAAAGGAACAGAAGAGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CTTGACGCAGGAAGTCACCAGAGTACTCAAGTCAACCGCAAACTAGTGGTTACAAAGAAAAGGAGACCTTaGCCTCACGTGAGAACAGGT +
Preference number: 5 (lower is better)
Translates to: LDAGSHQSTQVNRKLVVTKKRRP*PHVRTG
Trigger: ACCTGTTCTCACGTGAGGCAAAGGTCTCCTTTTCTT...TGTAACCACTAGTTTGCGGTTGACTTGAGTACTCTGGTGACTTCCTGCGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 90 bp GAGAATGTTGTTATGAGAACAAGCCGGTTCAGAAAAAGAGACAGATaGTTTCCCGAAGCGGCTGCAAAAAGCCCACAGGAACTATGGACC +
Preference number: 5 (lower is better)
Translates to: ENVVMRTSRFRKRDR*FPEAAAKSPQELWT
Trigger: GGTCCATAGTTCCTGTGGGCTTTTTGCAGCCGCTTCGGGAAATCATCTGTCTCTTTTTCTGAACCGGCTTGTTCTCATAACAACATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 90 bp GGTGGACCCACCTCTCCCACAAATCAGAGCAAGAGAATGTTGTTATaGGAACAAGCCGGTTCAGAAAAAGAGACAGATGATTTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: GGPTSPTNQSKRMLL*EQAGSEKETDDFPK
Trigger: CTTCGGGAAATCATCTGTCTCTTTTTCTGAACCGGCTTGTTCTCATAACAACATTCTCTTGCTCTGATTTGTGGGAGAGGTGGGTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 90 bp CCTATCCGTTCATTCTCTTGGTCCTCAGGAGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGGATTTCAATGCCTAGGATCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PIRSFSWSSGGCISP*NSTLTWISMPRIKA
Trigger: AGCCTTGATCCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCCTGAGGACCAAGAGAATGAACGGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS-3UTR CAA 90 bp AAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAAAGCTCCTGGAAAGCCTaGAGGGTTCCCTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KFIQLSSPHNALARHCRESSWKA*RVPLQV
Trigger: CACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCT...TTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: FIQLSSPHNALARHCREHRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTCTCAGCAATGTCAAAGGCCAGTTGGTTATTCTTCTCCACATTTTGCTCATCCAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: FSAMSKASWLFFSTFCSSRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...GGATGAGCAAAATGTGGAGAAGAATAACCAACTGGCCTTTGACATTGCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTACTTGGCCGGAGGAAGTaGACGTTGATATTGGGATAC +
Preference number: 5 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLLGRRK*TLILGY
Trigger: GTATCCCAATATCAACGTCAACTTCCTCCGGCCAAG...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACCACCAACCCAGCAGTTaGCTTGAACGAGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: FIQLSSPHNALARHCREHHQPSS*LERATD
Trigger: GTCTGTAGCTCGTTCAAGCAAACTGCTGGGTTGGTG...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GAAGACTTAACTCTCCGAGAGAAAACCTGCCTGGAGCTGCGCACATTCTCACAGAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: EDLTLREKTCLELRTFSQNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...CTGTGAGAATGTGCGCAGCTCCAGGCAGGTTTTCTCTCGGAGAGTTAAGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS-3UTR CAA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGCGCAGTACTCGCACTaGAAGCAGCTCCGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLAQYSH*KQLRWK
Trigger: CTTCCACCGGAGCTGCTTCAAGTGCGAGTACTGCGC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTTTGAGCCCAGGAGTTaGAGACCATCCTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNFEPRS*RPSWAT
Trigger: GGTTGCCCAGGATGGTCTCAAACTCCTGGGCTCAAA...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GGAGGCCATTTCTTTGCCTGTCATGATGGGAGAAATGCCCAATTCCTTCTCAGCAAGATGAGGCATGTATaGCATTGCATAGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: GGHFFACHDGRNAQFLLSKMRHV*HCIDAD
Trigger: GTCAGCATCTATGCAATGCAATACATGCCTCATCTT...GCTGAGAAGGAATTGGGCATTTCTCCCATCATGACAGGCAAAGAAATGGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495076.5
CDS-3UTR CAA 90 bp GAGCACCACAAGGCCTACATGAACCAGCTGTTAGGGAAGGGAAAGGATGCAACTTTCCCTACTTCATTTTaGGTCATCAACCGTATCAGA +
Preference number: 5 (lower is better)
Translates to: EHHKAYMNQLLGKGKDATFPTSF*VINRIR
Trigger: TCTGATACGGTTGATGACCAAAAATGAAGTAGGGAA...AGTTGCATCCTTTCCCTTCCCTAACAGCTGGTTCATGTAGGCCTTGTGGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAAAGGAGCGGTAGTCCTTaGGCTTTAGTTCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRSGSP*ALVPGG
Trigger: ACCACCTGGAACTAAAGCCAAAGGACTACCGCTCCT...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAACTATTCCTGTTCCCATaGGCCAGAAAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKLFLFP*ARKALG
Trigger: TCCTAGAGCCTTTCTGGCCAATGGGAACAGGAATAG...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp GTGCACAGTAGAGGCGGTTACCATGGGCCTGAGCTAATGACTGTTCTCTACAACCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: VHSRGGYHGPELMTVLYNPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...GTTGTAGAGAACAGTCATTAGCTCAGGCCCATGGTAACCGCCTCTACTGTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACTCATTGCGAGTCAATTaGGGGGTGGTTCGGGAATTC +
Preference number: 5 (lower is better)
Translates to: FIQLSSPHNALARHCREHSLRVN*GVVREF
Trigger: GAATTCCCGAACCACCCCCAAATTGACTCGCAATGA...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACGAGCTACAGACTCATaGCGAGTCAATTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKRATDS*RVNLGV
Trigger: CACCCCCAAATTGACTCGCAATGAGTCTGTAGCTCG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGTGCCGGTCTCTTCCTTaGTGCGTAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: IKFIQLSSPHNALARHCRCRSLP*CVARES
Trigger: CGACTCTCTGGCTACGCACAAAGGAAGAGACCGGCA...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAATTCCCAATGACAGACTaGGAGCTGGGGACATGTCAG +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKFPMTD*ELGTCQ
Trigger: CTGACATGTCCCCAGCTCCAAGTCTGTCATTGGGAA...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCTCTCCAAGTCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: HVPFIMAKSRCVIQMLSKSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...CTTGGAGAGCATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAATATCCGTTCATTCTCTaGGTCCTCAGGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKYPFIL*VLRRLY
Trigger: ATACAGCCTCCTGAGGACCAAGAGAATGAACGGATA...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LSSPHNALARHCREHKGDAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...GTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAAAAGTTGACGTTGATATaGGGATACCGAGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKKLTLI*GYRVTG
Trigger: CCCTGTCACTCGGTATCCCAATATCAACGTCAACTT...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAGGCCGTCAGAGGAGCTaGGAAGCAAACTGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLGRQRS*EANCMK
Trigger: CTTCATGCAGTTTGCTTCCAAGCTCCTCTGACGGCC...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAAGAACACCCAGCAGTTaGTGGAGCTCTGGACGCATC +
Preference number: 5 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLRTPSS*WSSGRI
Trigger: GATGCGTCCAGAGCTCCACAAACTGCTGGGTGTTCT...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp ATTTTGAACTCCCGTGCTATACCAAGTCACCTTCTGGCTCAGAATCAAGAACCATCTTTCTTGGTGGTTTaGCTCTTTAACCACACTGCC +
Preference number: 5 (lower is better)
Translates to: ILNSRAIPSHLLAQNQEPSFLVV*LFNHTA
Trigger: GGCAGTGTGGTTAAAGAGCAAAACCACCAAGAAAGA...TGGTTCTTGATTCTGAGCCAGAAGGTGACTTGGTATAGCACGGGAGTTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACTCAATAACAACCACCTaGGCCCCCAGTAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNSITTT*APSKDK
Trigger: CTTATCCTTACTGGGGGCCAAGGTGGTTGTTATTGA...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACATTTTCCTTTTTATCCTaGGGAGAACGCTTCCGAGAG +
Preference number: 5 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTFSFLS*GERFRE
Trigger: CTCTCGGAAGCGTTCTCCCAAGGATAAAAAGGAAAA...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS CCA 90 bp TGGTCCTCAGGAGGCTGTATAAGTCCTTGGAATTCCACATTGACGTaGATTTCAATGCCTAGGATCAAGGCTACTTTCAAAAGTATTAGT +
Preference number: 5 (lower is better)
Translates to: WSSGGCISPWNSTLT*ISMPRIKATFKSIS
Trigger: ACTAATACTTTTGAAAGTAGCCTTGATCCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCCTGAGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS-3UTR CAA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACCCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACCAATGATGAGACACTaGGTGTTAGTGCACGCTTTT +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKPMMRH*VLVHAF
Trigger: AAAAGCGTGCACTAACACCAAGTGTCTCATCATTGG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp AATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACCCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: NLFNYLPLTTHLLDTVGNPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...GTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGCCTTGGAATTCCACATaGACGTGGATTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMPWNST*TWISMP
Trigger: AGGCATTGAAATCCACGTCAATGTGGAATTCCAAGG...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp ATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACAAATGTAGTATCACTCCTTaGTCCAGCAAACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IQLSSPHNALARHCREHKCSITP*SSKLCF
Trigger: AAAGCAGAGTTTGCTGGACAAAGGAGTGATACTACA...TTTGTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ACGCACTTGCTAGACACTGTAGGGAACACAAAGGTGACACAGAAAAGACTCTTAAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: THLLDTVGNTKVTQKRLLNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...TAAGAGTCTTTTCTGTGTCACCTTTGTGTTCCCTACAGTGTCTAGCAAGTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGCCATGTACTTCACTTaGTTCTGGTTCCCAACGGCA +
Preference number: 5 (lower is better)
Translates to: IKFIQLSSPHNALARHCRAMYFT*FWFPTA
Trigger: TGCCGTTGGGAACCAGAACAAAGTGAAGTACATGGC...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp AAATCTGTGCCAGGACCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGGCAAGTTTTACAAGTaGCTGAGAGAGGCCATTTTA +
Preference number: 5 (lower is better)
Translates to: KSVPGPLTRSSKYKLGNTGKFYK*LREAIL
Trigger: TAAAATGGCCTCTCTCAGCAACTTGTAAAACTTGCC...TGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGGTCCTGGCACAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGAAGATGAGGCATGTATaGCATTGCATAGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMKMRHV*HCIDAD
Trigger: GTCAGCATCTATGCAATGCAATACATGCCTCATCTT...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TATCAAAGGAGAAAAGGGTATCTATTTCATGCCAGCCATAAAATACTGCCCATATTGGGACACCACATTTaGAACTCCCGTGCTATACCA +
Preference number: 5 (lower is better)
Translates to: YQRRKGYLFHASHKILPILGHHI*NSRAIP
Trigger: TGGTATAGCACGGGAGTTCAAAATGTGGTGTCCCAA...TATGGGCAGTATTTTATGGCTGGCATGAAATAGATACCCTTTTCTCCTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS TCA 90 bp TTAAAGCCGTTAAAATATGTGATTCTAGATGCTTTTCTCCTTGAGTaGCCATGTGCTTGTGGAAATTCAGCCCACTTCTTCCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LKPLKYVILDAFLLE*PCACGNSAHFFLLN
Trigger: ATTCAGCAGGAAGAAGTGGGCTGAATTTCCACAAGCACATGGTCACTCAAGGAGAAAAGCATCTAGAATCACATATTTTAACGGCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 90 bp AAAGTTAAAGCCGTTAAAATATGTGATTCTAGATGCTTTTCTCCTTaGGTGACCATGTGCTTGTGGAAATTCAGCCCACTTCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KVKAVKICDSRCFSP*VTMCLWKFSPLLPA
Trigger: AGCAGGAAGAAGTGGGCTGAATTTCCACAAGCACATGGTCACTCAAGGAGAAAAGCATCTAGAATCACATATTTTAACGGCTTTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS-3UTR CAA 90 bp ATAAAATTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGAGGCTGTATAAGTCCTaGGAATTCCACATTGACGTG +
Preference number: 5 (lower is better)
Translates to: IKFIQLSSPHNALARHCRRLYKS*EFHIDV
Trigger: CACGTCAATGTGGAATTCCAAGGACTTATACAGCCT...CCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp TTATCCCCACATGTTCCCTTCATCATGGCTAAATCAAGGTGTGTGATTCAAATGGCTGTTGTATTTCGGTaGATAAAATTTGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: LSPHVPFIMAKSRCVIQMAVVFR*IKFAVM
Trigger: CATCACGGCAAATTTTATCAACCGAAATACAACAGC...CATTTGAATCACACACCTTGATTTAGCCATGATGAAGGGAACATGTGGGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp TTTATTCAATTATCTTCCCCTCACAACGCACTTGCTAGACACTGTAGGGAACACCCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: FIQLSSPHNALARHCREHPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...GTGTTCCCTACAGTGTCTAGCAAGTGCGTTGTGAGGGGAAGATAATTGAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400561.6
CDS-3UTR CAA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTACACACTGTGATTCCTTaGGGACACCACATTTTGAAC +
Preference number: 5 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLHTVIP*GHHILN
Trigger: GTTCAAAATGTGGTGTCCCAAAGGAATCACAGTGTG...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp CATGAACTTGCTGCCCCACTGCCTCTCACAATTTATAAATTACAGTGGAGAAAACCAGGTGAATATCTTTaGTTTCGCCAGTATCATATA +
Preference number: 5 (lower is better)
Translates to: HELAAPLPLTIYKLQWRKPGEYL*FRQYHI
Trigger: TATATGATACTGGCGAAACAAAAGATATTCACCTGG...TTTTCTCCACTGTAATTTATAAATTGTGAGAGGCAGTGGGGCAGCAAGTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000495076.5
CDS-3UTR CAA 90 bp CCACTAACACGCAGTAGTAAGTATAAGCTTGGAAACACAGCATTCATAGATTTAAAATGGGTAATTCTCTaGTCCCACCATGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: PLTRSSKYKLGNTAFIDLKWVIL*SHHGNS
Trigger: AGAATTTCCATGGTGGGACAAGAGAATTACCCATTT...TAAATCTATGAATGCTGTGTTTCCAAGCTTATACTTACTACTGCGTGTTAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS-3UTR CAA 90 bp TCAACCGTATCAGATAAAAAGAGGATTCCTCTGGACAAAAACGAATTCAAGAAAAATGTCAAAGGCCAGTaGGTTATTCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: STVSDKKRIPLDKNEFKKNVKGQ*VILLHI
Trigger: AATGTGGAGAAGAATAACCAACTGGCCTTTGACATT...TTTCTTGAATTCGTTTTTGTCCAGAGGAATCCTCTTTTTATCTGATACGGTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS GCA 72 bp GGGTGGGTGCCCGCAGGGCACAGGTGCCGCCGTGGCTaGTCGCACAACCCCTGCAGCTGCGATCCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: GWVPAGHRCRRG*SHNPCSCDPAQ
Trigger: CTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGCCCTGCGGGCACCCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS CCA 72 bp GGCAGGGTGGGTGCCCGCAGGGCACAGGTGCCGCCGTaGCTGCTCGCACAACCCCTGCAGCTGCGATCCCGC +
Preference number: 6 (lower is better)
Translates to: GRVGARRAQVPP*LLAQPLQLRSR
Trigger: GCGGGATCGCAGCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGCCCTGCGGGCACCCACCCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 72 bp GGGCACAGGTGCCGCCGTGGCTGCTCGCACAACCCCTaGAGCTGCGATCCCGCCCAGTTAGCCTCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: GHRCRRGCSHNP*SCDPAQLASGA
Trigger: AGCCCCCGAGGCTAACTGGGCGGGATCGCAGCTGCAGGGGTTGTGCGAGCAGCCACGGCGGCACCTGTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS GCA 72 bp TGCGGGACGGGGCTGAGGGACAGCACTTCACGGCTCTaGCGCCCACCGGACGGCCCCATCACTGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: CGTGLRDSTSRL*RPPDGPITGPQ
Trigger: CTGTGGCCCAGTGATGGGGCCGTCCGGTGGGCGGCAGAGCCGTGAAGTGCTGTCCCTCAGCCCCGTCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461307.5
CDS GCA 72 bp GCCTGCCGAGAGAACGCTTGTGTCGGGTGCAGGGAGTaGCGCGCCCACCCTGGCCCGCAGGAATCACACGGG +
Preference number: 6 (lower is better)
Translates to: ACRENACVGCRE*RAHPGPQESHG
Trigger: CCCGTGTGATTCCTGCGGGCCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 72 bp GCAGCCTTGCCTGAGAAGGGCATCCCCGGTGCAGTCTaGCCCAGGGATCCAGGCCCCCACCAGGTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: AALPEKGIPGAV*PRDPGPHQVPP
Trigger: GGGAGGCACCTGGTGGGGGCCTGGATCCCTGGGGCAGACTGCACCGGGGATGCCCTTCTCAGGCAAGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS GCA 72 bp TCCAATGGGGCTCCGGAGACCGTCTCCAGCCAGGCCTaGACCGCCGCGTGGCGTATGGAGGGAAGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: SNGAPETVSSQA*TAAWRMEGRSG
Trigger: GCCCGACCTTCCCTCCATACGCCACGCGGCGGTGCAGGCCTGGCTGGAGACGGTCTCCGGAGCCCCATTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578984.1
CDS CCA 72 bp GCAGGGCGAACCTGCCCAGGCAGGCAGCAGGACGGCTaGCTGGCCCCACGCTCTTGTGTCAGCTGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: AGRTCPGRQQDG*LAPRSCVSCLR
Trigger: ACGGAGACAGCTGACACAAGAGCGTGGGGCCAGCCAGCCGTCCTGCTGCCTGCCTGGGCAGGTTCGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000461307.5
CDS CCA 72 bp TCCGCTCTGGGGTGCCCCTCAGTCGCTTGGCGATGCTaGGCTCCTCCAGGCCGTTCACGCCTGAACCTGCGG +
Preference number: 6 (lower is better)
Translates to: SALGCPSVAWRC*APPGRSRLNLR
Trigger: CCGCAGGTTCAGGCGTGAACGGCCTGGAGGAGCCCAGCATCGCCAAGCGACTGAGGGGCACCCCAGAGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS CCA 72 bp CCGGAGACCGTCTCCAGCCAGGCCTGCACCGCCGCGTaGCGTATGGAGGGAAGGTCGGGCACTTCACTGGAC +
Preference number: 6 (lower is better)
Translates to: PETVSSQACTAA*RMEGRSGTSLD
Trigger: GTCCAGTGAAGTGCCCGACCTTCCCTCCATACGCCACGCGGCGGTGCAGGCCTGGCTGGAGACGGTCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578984.1
CDS CAA 90 bp TCAGCTTGGGGTCGTCCTTCTTGCCCATGCCTGCCGAGAGAACGCTaGTGTCGGGTGCAGGGAGTGCCGCGCCCACCCTGGCCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SAWGRPSCPCLPRER*CRVQGVPRPPWPAG
Trigger: TCCTGCGGGCCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CCA 72 bp GATGCGGGGTGGCAGGGTACCCAGGCCACACCCTGGTaGGCTGCAGGGCTCAAGAGGCAGCTGCGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: DAGWQGTQATPW*AAGLKRQLRCL
Trigger: CAAGCAACGCAGCTGCCTCTTGAGCCCTGCAGCCCACCAGGGTGTGGCCTGGGTACCCTGCCACCCCGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp CTGCCGGAACTTCCACTCCCAAGCCAGGCCCAAGGTTaGCCTGCAGCCATGGGGCCCTGGCGTCCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LPELPLPSQAQG*PAAMGPWRPPS
Trigger: GGAAGGGGGACGCCAGGGCCCCATGGCTGCAGGCAAACCTTGGGCCTGGCTTGGGAGTGGAAGTTCCGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CAA 72 bp GGTCGTCCTTCTTGCCCATGCCTGCCGAGAGAACGCTaGTGTCGGGTGCAGGGAGTGCCGCGCCCACCCTGG +
Preference number: 6 (lower is better)
Translates to: GRPSCPCLPRER*CRVQGVPRPPW
Trigger: CCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CCA 72 bp CGCTTGTGTCGGGTGCAGGGAGTGCCGCGCCCACCCTaGCCCGCAGGAATCACACGGGGCAAATGTGCAAAG +
Preference number: 6 (lower is better)
Translates to: RLCRVQGVPRPP*PAGITRGKCAK
Trigger: CTTTGCACATTTGCCCCGTGTGATTCCTGCGGGCCAGGGTGGGCGCGGCACTCCCTGCACCCGACACAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CCA 72 bp CTCCCTCCTCCTCCATCTCAGACTCGGAACTACTGCTaGCGACGTCCTCCTCGGCGCCCGTGTCCAGCACGC +
Preference number: 6 (lower is better)
Translates to: LPPPPSQTRNYC*RRPPRRPCPAR
Trigger: GCGTGCTGGACACGGGCGCCGAGGAGGACGTCGCCAGCAGTAGTTCCGAGTCTGAGATGGAGGAGGAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS CCA 72 bp GAGGAGGCGTCTGCTGCTGGAGTGGCCCCAGGATCCTaGCCTGGCAGAAGGGGCTTCCTTCTTCCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: EEASAAGVAPGS*PGRRGFLLPRQ
Trigger: CTGCCTCGGAAGAAGGAAGCCCCTTCTGCCAGGCCAGGATCCTGGGGCCACTCCAGCAGCAGACGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp CCTCCAGGTCAGAGCGTTCTCTCTCCTTCATCACCCTaGACCCGGCCCCCAGAGGGGAGACGCAGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: PPGQSVLSPSSP*TRPPEGRRSLP
Trigger: GGGGAGACTGCGTCTCCCCTCTGGGGGCCGGGTTCAGGGTGATGAAGGAGAGAGAACGCTCTGACCTGGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS CCA 72 bp ACCGGACGGCCCCATCACTGGGCCACAGCCTGCCAGTaGAACTCCCCTCTGATTTGCACCAGCACCTCCGAC +
Preference number: 6 (lower is better)
Translates to: TGRPHHWATACQ*NSPLICTSTSD
Trigger: GTCGGAGGTGCTGGTGCAAATCAGAGGGGAGTTCCACTGGCAGGCTGTGGCCCAGTGATGGGGCCGTCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS CCA 72 bp GGCGTCTGCTGCTGGAGTGGCCCCAGGATCCTGGCCTaGCAGAAGGGGCTTCCTTCTTCCGAGGCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: GVCCWSGPRILA*QKGLPSSEAGQ
Trigger: TTGACCTGCCTCGGAAGAAGGAAGCCCCTTCTGCCAGGCCAGGATCCTGGGGCCACTCCAGCAGCAGACGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp CTACCTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCC +
Preference number: 6 (lower is better)
Translates to: LPGVLSVELATA*ARPFASVVAPS
Trigger: GGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS CAA 90 bp GAAGTGAGGCTACCTGGGGTTCTCTCAGTGGAGCTGGCCACGGCGTaGGCCCGTCCGTTTGCATCTGTGGTGGCGCCATCCTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: EVRLPGVLSVELATA*ARPFASVVAPSCRG
Trigger: ACCCCTGCAGGATGGCGCCACCACAGATGCAAACGGACGGGCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTAGCCTCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS TCA 72 bp CCCCAGAGGGGGAGGTGGGATGGCTGTGGGTCCACCTaGCACTGTCACGTTAATCTGGCCACGCATCCTCCG +
Preference number: 6 (lower is better)
Translates to: PQRGRWDGCGST*HCHVNLATHPP
Trigger: CGGAGGATGCGTGGCCAGATTAACGTGACAGTGTCAGGTGGACCCACAGCCATCCCACCTCCCCCTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424046.1
CDS TCA 72 bp GCAAACGGCTTTGCCTCTGTGGGTGCCCCTAGAGCGTaGGGCCTTAGAGGCCGCCCTCTGGCTCTAGGGTTC +
Preference number: 6 (lower is better)
Translates to: ANGFASVGAPRA*GLRGRPLALGF
Trigger: GAACCCTAGAGCCAGAGGGCGGCCTCTAAGGCCTCACGCTCTAGGGGCACCCACAGAGGCAAAGCCGTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp GCCTGGATCTCCAGAGGATCCGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCGGCTTCACTGGACTCT +
Preference number: 6 (lower is better)
Translates to: AWISRGSAACMT*WSLWFPASLDS
Trigger: AGAGTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS GCA 72 bp TGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTaGATGACCTGCTGGAGCCTCTGGTTCCCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: CTSAWISRGSAA*MTCWSLWFPAS
Trigger: TGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS GCA 72 bp TCACCTTCCACTGCCATGCGTTCCCGGAGCTCCTGCTaGAGTCGACTCTGCCGGTCTTCCAGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SPSTAMRSRSSC*SRLCRSSSSSS
Trigger: GGAGCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 72 bp CACTCACCTTCCACTGCCATGCGTTCCCGGAGCTCCTaGTGCAGTCGACTCTGCCGGTCTTCCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HSPSTAMRSRSS*CSRLCRSSSSS
Trigger: GCTGGAGCTGGAAGACCGGCAGAGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 72 bp GGCCTCCATGGGTGCCTTACCCCACTCACCTTCCACTaGCATGCGTTCCCGGAGCTCCTGCTGCAGTCGACT +
Preference number: 6 (lower is better)
Translates to: GLHGCLTPLTFH*HAFPELLLQST
Trigger: AGTCGACTGCAGCAGGAGCTCCGGGAACGCATGGCAGTGGAAGGTGAGTGGGGTAAGGCACCCATGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 72 bp GGGCTGGGAGGGGTGAAGTCACCACCCGTCCCTGTGTaGCTGAGGTGGTGGTCAGCCACAGGAGCTGACATT +
Preference number: 6 (lower is better)
Translates to: GLGGVKSPPVPV*LRWWSATGADI
Trigger: AATGTCAGCTCCTGTGGCTGACCACCACCTCAGGCACACAGGGACGGGTGGTGACTTCACCCCTCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp ACGCGCCACCCAGCCAAACAAGGAAGTGAGGCTACCTaGGGTTCTCTCAGTGGAGCTGGCCACGGCGTTGGC +
Preference number: 6 (lower is better)
Translates to: TRHPAKQGSEAT*GSLSGAGHGVG
Trigger: GCCAACGCCGTGGCCAGCTCCACTGAGAGAACCCCAGGTAGCCTCACTTCCTTGTTTGGCTGGGTGGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS CCA 72 bp GACACAGCAAGGGCAGAAGGAGAGAGGTCTACGTCGTaGAGTCCCGCCACTGGGCTCAACTGCTTCGCCCCG +
Preference number: 6 (lower is better)
Translates to: DTARAEGERSTS*SPATGLNCFAP
Trigger: CGGGGCGAAGCAGTTGAGCCCAGTGGCGGGACTCCACGACGTAGACCTCTCTCCTTCTGCCCTTGCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579997.5
CDS CAA 90 bp GTCCTGAGAATTCCAGGCAGGCTGCAACCACAGCCGCGCTCCCTGTaGCTCCATCCATCCCATCTGTGGGGCGGCCTTGTGCGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: VLRIPGRLQPQPRSL*LHPSHLWGGLVRSC
Trigger: ACAGCTCCGCACAAGGCCGCCCCACAGATGGGATGGATGGAGCAACAGGGAGCGCGGCTGTGGTTGCAGCCTGCCTGGAATTCTCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp CCCACCCTGGCCCGCAGGAATCACACGGGGCAAATGTaGAAAGAGGGCCGAGCAAGATGCTGCCGGAACTTC +
Preference number: 6 (lower is better)
Translates to: PTLARRNHTGQM*KEGRARCCRNF
Trigger: GAAGTTCCGGCAGCATCTTGCTCGGCCCTCTTTGCACATTTGCCCCGTGTGATTCCTGCGGGCCAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 72 bp CTGCATCAGCTTGGGGTCGTCCTTCTTGCCCATGCCTaGCGAGAGAACGCTTGTGTCGGGTGCAGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LHQLGVVLLAHA*RENACVGCREC
Trigger: GCACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 72 bp ATCCAGAGACGGCAGCTGCTGCTGGGTAGAGAAGTCTaGCGCCTCCCTGGCATAGCTGAGCAGAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: IQRRQLLLGREV*RLPGIAEQSLL
Trigger: CAGGAGGCTCTGCTCAGCTATGCCAGGGAGGCGGCAGACTTCTCTACCCAGCAGCAGCTGCCGTCTCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS GCA 72 bp TTCACGCCTGAACCTGCGGGACAAGCACAGAAGCACTaGACTGAGGTCCAACCACAGACGGGGCGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: FTPEPAGQAQKH*TEVQPQTGRGG
Trigger: ACCCCCACGCCCCGTCTGTGGTTGGACCTCAGTGCAGTGCTTCTGTGCTTGTCCCGCAGGTTCAGGCGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578905.1
CDS GCA 72 bp TGCACGTCAGCCTGGATCTCCAGAGGATCCGCCGCGTaGATGACCTGCTGGAGCCTCTGGTTCCCGGCTTTA +
Preference number: 6 (lower is better)
Translates to: CTSAWISRGSAA*MTCWSLWFPAL
Trigger: TAAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS CCA 72 bp TGGATCTCCAGAGGATCCGCCGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCTTCACTGGACTCTTCC +
Preference number: 6 (lower is better)
Translates to: WISRGSAACMTC*SLWFPASLDSS
Trigger: GGAAGAGTCCAGTGAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441493.7
CDS CAA 90 bp GGTTCAGGCTCTGGCCTCTCATGGTGGGGGCTCTGCTTGCCACGGTaGTCAGCATCAAGATCCCTGTATGTCTGCTGGCCGCCATGTGCC +
Preference number: 6 (lower is better)
Translates to: GSGSGLSWWGLCLPR*SASRSLYVCWPPCA
Trigger: GGCACATGGCGGCCAGCAGACATACAGGGATCTTGATGCTGACAACCGTGGCAAGCAGAGCCCCCACCATGAGAGGCCAGAGCCTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CAA 90 bp CGACGAGGAGGTTCAGGCTCTGGCCTCTCATGGTGGGGGCTCTGCTaGCCACGGTTGTCAGCATCAAGATCCCTGTATGTCTGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: RRGGSGSGLSWWGLC*PRLSASRSLYVCWP
Trigger: CGGCCAGCAGACATACAGGGATCTTGATGCTGACAACCGTGGCAAGCAGAGCCCCCACCATGAGAGGCCAGAGCCTGAACCTCCTCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS TCA 72 bp CCCCAGAGGGGGAGGTGGGATGGCTGTGGGTCCACCTaGCACTGTCACGTTAATCGACTAGGGCTTCACAGC +
Preference number: 6 (lower is better)
Translates to: PQRGRWDGCGST*HCHVNRLGLHS
Trigger: GCTGTGAAGCCCTAGTCGATTAACGTGACAGTGTCAGGTGGACCCACAGCCATCCCACCTCCCCCTCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441493.7
ENST00000672019.1
CDS TCA 72 bp AGGTGGTGGTCAGCCACAGGAGCTGACATTCTGCTGTaGATCTGGATGCGGGGTGGCAGGGTACCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: RWWSATGADILL*IWMRGGRVPRP
Trigger: TGGCCTGGGTACCCTGCCACCCCGCATCCAGATTCACAGCAGAATGTCAGCTCCTGTGGCTGACCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp CACACGGGGCAAATGTGCAAAGAGGGCCGAGCAAGATaGTGCCGGAACTTCCACTCCCAAGCCAGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: HTGQMCKEGRAR*CRNFHSQARPK
Trigger: CTTGGGCCTGGCTTGGGAGTGGAAGTTCCGGCAGCATCTTGCTCGGCCCTCTTTGCACATTTGCCCCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 72 bp ACTCCTGCATCAGCTTGGGGTCGTCCTTCTTGCCCATaGCTGCCGAGAGAACGCTTGTGTCGGGTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: TPASAWGRPSCP*LPRERLCRVQG
Trigger: TCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGATGCAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS GCA 72 bp GCCTGGATCTCCAGAGGATCCGCCGCGTGCATGACCTaGTGGAGCCTCTGGTTCCCGGCTTTAAATGTCCTC +
Preference number: 6 (lower is better)
Translates to: AWISRGSAACMT*WSLWFPALNVL
Trigger: GAGGACATTTAAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS GCA 72 bp ACGGGGCAAATGTGCAAAGAGGGCCGAGCAAGATGCTaGCGGAACTTCCACTCCCAAGCCAGGCCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: TGQMCKEGRARC*RNFHSQARPKV
Trigger: AACCTTGGGCCTGGCTTGGGAGTGGAAGTTCCGGCAGCATCTTGCTCGGCCCTCTTTGCACATTTGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CCA 72 bp GCTGGCTCCCTCAGCCACGTGCACTTCATAGCTCCGTaGGGTGGCGACATAGACTGGCAGTTACCTGGTACT +
Preference number: 6 (lower is better)
Translates to: AGSLSHVHFIAP*GGDIDWQLPGT
Trigger: AGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498345.1
CDS CCA 72 bp CTTAGAGGCCGCCCTCTGGCTCTAGGGTTCCATGACTaGTGTCCATGGCTTGTTCCTGGGGTCCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: LRGRPLALGFHD*CPWLVPGVLFL
Trigger: CAGGAACAGGACCCCAGGAACAAGCCATGGACACCAGTCATGGAACCCTAGAGCCAGAGGGCGGCCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp TCTGGCCTCTCATGGTGGGGGCTCTGCTTGCCACGGTaGTCAGCATCAAGATCCCTGTATGTCTGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: SGLSWWGLCLPR*SASRSLYVCWP
Trigger: CGGCCAGCAGACATACAGGGATCTTGATGCTGACAACCGTGGCAAGCAGAGCCCCCACCATGAGAGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CAA 90 bp TGCACTAGCTTGAACCACTCCTGCATCAGCTTGGGGTCGTCCTTCTaGCCCATGCCTGCCGAGAGAACGCTTGTGTCGGGTGCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: CTSLNHSCISLGSSF*PMPAERTLVSGAGS
Trigger: ACTCCCTGCACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGATGCAGGAGTGGTTCAAGCTAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CAA 90 bp CTGGTGTCCATGGCTTGTTCCTGGGGTCCTGTTCCTGTTTCTCCCTaGCTCCTTGTATCTGCTGGGCCCTGGGGAGGCTCACCAAGTACC +
Preference number: 6 (lower is better)
Translates to: LVSMACSWGPVPVSP*LLVSAGPWGGSPST
Trigger: GGTACTTGGTGAGCCTCCCCAGGGCCCAGCAGATACAAGGAGCAAGGGAGAAACAGGAACAGGACCCCAGGAACAAGCCATGGACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp ATCACTGGGCCACAGCCTGCCAGTGGAACTCCCCTCTaGTTTGCACCAGCACCTCCGACAGGCCATAGAGAA +
Preference number: 6 (lower is better)
Translates to: ITGPQPASGTPL*FAPAPPTGHRE
Trigger: TTCTCTATGGCCTGTCGGAGGTGCTGGTGCAAATCAGAGGGGAGTTCCACTGGCAGGCTGTGGCCCAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS GCA 72 bp CAGGCTGACTCCATACCATGCGGAAGTCAGGTCAGCTaGCCGTGGCTCGGTTGTCTCCCATGTCATCTGTCT +
Preference number: 6 (lower is better)
Translates to: QADSIPCGSQVS*PWLGCLPCHLS
Trigger: AGACAGATGACATGGGAGACAACCGAGCCACGGGCAGCTGACCTGACTTCCGCATGGTATGGAGTCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp CATGGAGCCCTCAGCCACGTGCACTTCATAGCTCCGTaGGGTGGCGACATAGACTGGCAGTTACCTGGTACT +
Preference number: 6 (lower is better)
Translates to: HGALSHVHFIAP*GGDIDWQLPGT
Trigger: AGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462645.1
ENST00000465886.1
CDS CCA 72 bp GACTCCATACCATGCGGAAGTCAGGTCAGCTGCCCGTaGCTCGGTTGTCTCCCATGTCATCTGTCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: DSIPCGSQVSCP*LGCLPCHLSPR
Trigger: CCTAGGAGACAGATGACATGGGAGACAACCGAGCCACGGGCAGCTGACCTGACTTCCGCATGGTATGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp TCAAATCTTCTTCCTGTGGGAGGTACCTGGCGCCACTaGCCTTGCAGTTCTGTGTCCCAGGGGCAGTACTCC +
Preference number: 6 (lower is better)
Translates to: SNLLPVGGTWRH*PCSSVSQGQYS
Trigger: GGAGTACTGCCCCTGGGACACAGAACTGCAAGGCCAGTGGCGCCAGGTACCTCCCACAGGAAGAAGATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS CAA 72 bp TTGAACCACTCCTGCATCAGCTTGGGGTCGTCCTTCTaGCCCATGCCTGCCGAGAGAACGCTTGTGTCGGGT +
Preference number: 6 (lower is better)
Translates to: LNHSCISLGSSF*PMPAERTLVSG
Trigger: ACCCGACACAAGCGTTCTCTCGGCAGGCATGGGCAAGAAGGACGACCCCAAGCTGATGCAGGAGTGGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252134.11
CDS CAA 72 bp GGTTCAGGCTCTGGCCTCTCATGGTGGGGGCTCTGCTaGCCACGGTTGTCAGCATCAAGATCCCTGTATGTC +
Preference number: 6 (lower is better)
Translates to: GSGSGLSWWGLC*PRLSASRSLYV
Trigger: GACATACAGGGATCTTGATGCTGACAACCGTGGCAAGCAGAGCCCCCACCATGAGAGGCCAGAGCCTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CAA 72 bp GGCAGCAGCAGGAGCCTCTTCTCATTCCATCACACCTaGTGCAGAGCCGCTCTGAGGGTCAAGGTGAGTCAC +
Preference number: 6 (lower is better)
Translates to: GSSRSLFSFHHT*CRAALRVKVSH
Trigger: GTGACTCACCTTGACCCTCAGAGCGGCTCTGCACAAGGTGTGATGGAATGAGAAGAGGCTCCTGCTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp CCCAAGCCTACAGGCGAGGGAAGAATAAATTTGCCTCCTTCAACTTaGAGCACTTGTGTCCCGCCTGCCTCAGGTGGACCCACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PKPTGEGRINLPPST*STCVPPASGGPTSP
Trigger: GGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCCTCGCCTGTAGGCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp AGCACGTCAGGCAGCAGCAGGAGCCTCTTCTCATTCCATCACACCTaGTGCAGAGCCGCTCTGAGGGTCAAGGTGAGTCACATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: STSGSSRSLFSFHHT*CRAALRVKVSHICS
Trigger: AGAGCAGATGTGACTCACCTTGACCCTCAGAGCGGCTCTGCACAAGGTGTGATGGAATGAGAAGAGGCTCCTGCTGCTGCCTGACGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp CAGGTGGTGGCCTGGACAAACCGGTCAAAGAGGACATaGGCTGGGTTCATGGTCTCATGCTTCCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QVVAWTNRSKRT*AGFMVSCFLSS
Trigger: GGAGGAGAGGAAGCATGAGACCATGAACCCAGCTCATGTCCTCTTTGACCGGTTTGTCCAGGCCACCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000424046.1
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp TTAGTTCCAGGTGGTCACAGAGCTCCTGGAAAGCCTTaGGGGTTCCCTTGCAGGTGGTGGCCTGGACAAACC +
Preference number: 6 (lower is better)
Translates to: LVPGGHRAPGKP*GFPCRWWPGQT
Trigger: GGTTTGTCCAGGCCACCACCTGCAAGGGAACCCTCAAGGCTTTCCAGGAGCTCTGTGACCACCTGGAACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000424046.1
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp CATGTGCTTGTGGAAATTCAGCCCACTTCTTCCTGCTaGATGCTCCGGGGGAGTAGAAGTGGGGTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: HVLVEIQPTSSC*MLRGSRSGVRE
Trigger: CTCCCGCACCCCACTTCTACTCCCCCGGAGCATTCAGCAGGAAGAAGTGGGCTGAATTTCCACAAGCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp CATAGACTGGCAGTTACCTGGTACTTCAACACCCTCTaGTTGAGACACTCAGCCAGCTCCTTGGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: HRLAVTWYFNTL*LRHSASSLALG
Trigger: GCCCAGGGCCAAGGAGCTGGCTGAGTGTCTCAAGCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462645.1
ENST00000465886.1
ENST00000498345.1
CDS GCA 72 bp AGTACCAGCCTTGGCACAGCCAACCCAGGCAGTAGGTaGTTCATGGATGGAGAAGCAGTGGGCATACTACCC +
Preference number: 6 (lower is better)
Translates to: STSLGTANPGSR*FMDGEAVGILP
Trigger: GGGTAGTATGCCCACTGCTTCTCCATCCATGAAGCACCTACTGCCTGGGTTGGCTGTGCCAAGGCTGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp CCCCACGCTCTTGTGTCAGCTGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCTCTTCAAATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: PHALVSAVSVCR*TVRAHSLQIWP
Trigger: TGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGCTGACACAAGAGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000461307.5
CDS CCA 72 bp AGCTCCGTGGGGTGGCGACATAGACTGGCAGTTACCTaGTACTTCAACACCCTCTGCTTGAGACACTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSVGWRHRLAVT*YFNTLCLRHSA
Trigger: GGCTGAGTGTCTCAAGCAGAGGGTGTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462645.1
ENST00000465886.1
ENST00000498345.1
CDS CCA 72 bp AGCCCTCAGCCACGTGCACTTCATAGCTCCGTGGGGTaGCGACATAGACTGGCAGTTACCTGGTACTTCAAC +
Preference number: 6 (lower is better)
Translates to: SPQPRALHSSVG*RHRLAVTWYFN
Trigger: GTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462645.1
ENST00000465886.1
CDS CCA 72 bp CTCCCTCAGCCACGTGCACTTCATAGCTCCGTGGGGTaGCGACATAGACTGGCAGTTACCTGGTACTTCAAC +
Preference number: 6 (lower is better)
Translates to: LPQPRALHSSVG*RHRLAVTWYFN
Trigger: GTTGAAGTACCAGGTAACTGCCAGTCTATGTCGCCACCCCACGGAGCTATGAAGTGCACGTGGCTGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498345.1
CDS CCA 72 bp ACCCAGGCAGTAGGTGCTTCATGGATGGAGAAGCAGTaGGCATACTACCCACCACAGCAACGTGAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: TQAVGASWMEKQ*AYYPPQQREGG
Trigger: ACCTCCCTCACGTTGCTGTGGTGGGTAGTATGCCCACTGCTTCTCCATCCATGAAGCACCTACTGCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp TGGATCTCCAGAGGATCCGCCGCGTGCATGACCTGCTaGAGCCTCTGGTTCCCGGCTTTAAATGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: WISRGSAACMTC*SLWFPALNVLK
Trigger: TTTGAGGACATTTAAAGCCGGGAACCAGAGGCTCCAGCAGGTCATGCACGCGGCGGATCCTCTGGAGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS TCA 72 bp CTGGAAGCCTTGATGAAGGCACACTCTCCCTGTCCCTaGGAAGGCGCAGATCCCAACCCTAACTCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: LEALMKAHSPCP*EGADPNPNSVA
Trigger: AGCAACTGAGTTAGGGTTGGGATCTGCGCCTTCTCAGGGACAGGGAGAGTGTGCCTTCATCAAGGCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp CCACCACAGCAACGTGAGGGAGGTGGGTGGCCAAGCTaGCACAATAGGTTGAATGTCCACACTGTCACCACT +
Preference number: 6 (lower is better)
Translates to: PPQQREGGGWPS*HNRLNVHTVTT
Trigger: AGTGGTGACAGTGTGGACATTCAACCTATTGTGTCAGCTTGGCCACCCACCTCCCTCACGTTGCTGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp CCCCCAGGCTTGGCTTTGGCTTTAGTATTCCGTATGTaGCGTCTAGCAAACGGCTTTGCCTCTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: PPGLALALVFRM*RLANGFASVGA
Trigger: GGCACCCACAGAGGCAAAGCCGTTTGCTAGACGTCACATACGGAATACTAAAGCCAAAGCCAAGCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp CTCTTGTGTCAGCTGTCTCCGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAATTTGGCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLCQLSPYADGL*GRILFKFGQQL
Trigger: CAGCTGCTGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGCTGACACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414725.6
ENST00000461307.5
CDS GCA 72 bp CTTTTCCCGTTGCTGTCTCCGTATGCCGATGGACTGTaGGGGCGCATTCTCTTCAAATTTGGCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LFPLLSPYADGL*GRILFKFGQQL
Trigger: CAGCTGCTGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGCAACGGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS GCA 72 bp TTTGCCTCCTTCAACTTTGAGCACTTGTGTCCCGCCTaGCTCAGGTGGACCCACCTCTCCCACAAATCAGAG +
Preference number: 6 (lower is better)
Translates to: FASFNFEHLCPA*LRWTHLSHKSE
Trigger: CTCTGATTTGTGGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp AGCAGCAGGAGCCTCTTCTCATTCCATCACACCTTGTaGAGAGCCGCTCTGAGGGTCAAGGTGAGTCACATC +
Preference number: 6 (lower is better)
Translates to: SSRSLFSFHHTL*RAALRVKVSHI
Trigger: GATGTGACTCACCTTGACCCTCAGAGCGGCTCTGCACAAGGTGTGATGGAATGAGAAGAGGCTCCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp TGCTTGTGGAAATTCAGCCCACTTCTTCCTGCTGAATaGTCCGGGGGAGTAGAAGTGGGGTGCGGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: CLWKFSPLLPAE*SGGVEVGCGRK
Trigger: TTTCCTCCCGCACCCCACTTCTACTCCCCCGGAGCATTCAGCAGGAAGAAGTGGGCTGAATTTCCACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp AACCCAGGGGAATTCTCAGCTCAGCCCCAGTGCAACTaGGAAAGCTCGACTGGAAGCCTTGATGAAGGCACA +
Preference number: 6 (lower is better)
Translates to: NPGEFSAQPQCN*ESSTGSLDEGT
Trigger: TGTGCCTTCATCAAGGCTTCCAGTCGAGCTTTCCCAGTTGCACTGGGGCTGAGCTGAGAATTCCCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp TGCGGAGCTGTGCTTCCCAAGCCTACAGGCGAGGGAAGAATAAATTaGCCTCCTTCAACTTTGAGCACTTGTGTCCCGCCTGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: CGAVLPKPTGEGRIN*PPSTLSTCVPPASG
Trigger: ACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCCTCGCCTGTAGGCTTGGGAAGCACAGCTCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp GGCAGTGAGCTTGGGACCACATTCTCCATTCTTTGCTaGCCCCCTAAAGCAGCACCCATCACCAGTATTGGG +
Preference number: 6 (lower is better)
Translates to: GSELGTTFSILC*PPKAAPITSIG
Trigger: CCCAATACTGGTGATGGGTGCTGCTTTAGGGGGTCAGCAAAGAATGGAGAATGTGGTCCCAAGCTCACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp ACTTGTTGCCCGAATGAAGAAATGTTGCTTTGGAGGTaGTGGCTCATGCCCTTGGCCTTGTCACAGAGGCCG +
Preference number: 6 (lower is better)
Translates to: TCCPNEEMLLWR*WLMPLALSQRP
Trigger: CGGCCTCTGTGACAAGGCCAAGGGCATGAGCCAGCACCTCCAAAGCAACATTTCTTCATTCGGGCAACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461307.5
ENST00000585038.1
CDS GCA 72 bp TGCAGAGCCGCTCTGAGGGTCAAGGTGAGTCACATCTaGTCTTGTGGTCTCACCAGCCATATTAAACGGCTG +
Preference number: 6 (lower is better)
Translates to: CRAALRVKVSHI*SCGLTSHIKRL
Trigger: CAGCCGTTTAATATGGCTGGTGAGACCACAAGAGCAGATGTGACTCACCTTGACCCTCAGAGCGGCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp GTTCCCGGCTTTAAATGTCCTCAAATCTTCTTCCTGTaGGAGGTACCTGGCGCCACTGGCCTTGCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: VPGFKCPQIFFL*EVPGATGLAVL
Trigger: CAGAACTGCAAGGCCAGTGGCGCCAGGTACCTCCCACAGGAAGAAGATTTGAGGACATTTAAAGCCGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672019.1
CDS CAA 72 bp GGGAAGAATAAATTTGCCTCCTTCAACTTTGAGCACTaGTGTCCCGCCTGCCTCAGGTGGACCCACCTCTCC +
Preference number: 6 (lower is better)
Translates to: GKNKFASFNFEH*CPACLRWTHLS
Trigger: GGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp ACAGGCGAGGGAAGAATAAATTTGCCTCCTTCAACTTaGAGCACTTGTGTCCCGCCTGCCTCAGGTGGACCC +
Preference number: 6 (lower is better)
Translates to: TGEGRINLPPST*STCVPPASGGP
Trigger: GGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCCTCGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp ACCATCCCCACCGATGATCACTTCAAATTCATACTCTaGCACAGGATGAGTCTTGGGGTGCACCAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: TIPTDDHFKFIL*HRMSLGVHQCP
Trigger: CGGGCACTGGTGCACCCCAAGACTCATCCTGTGTCAGAGTATGAATTTGAAGTGATCATCGGTGGGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp TCTGCTCTTGTGGTCTCACCAGCCATATTAAACGGCTaGAAGGCATTAGGGAAACCAGGGTGTGTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SALVVSPAILNG*KALGKPGCVVA
Trigger: CGCCACCACACACCCTGGTTTCCCTAATGCCTTTCAGCCGTTTAATATGGCTGGTGAGACCACAAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp CATAGAAACCCAGGGGAATTCTCAGCTCAGCCCCAGTaGAACTGGGAAAGCTCGACTGGAAGCCTTGATGAA +
Preference number: 6 (lower is better)
Translates to: HRNPGEFSAQPQ*NWESSTGSLDE
Trigger: TTCATCAAGGCTTCCAGTCGAGCTTTCCCAGTTGCACTGGGGCTGAGCTGAGAATTCCCCTGGGTTTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp AACACTCCTTTTCCCGTTGCTGTCTCCGTATGCCGATaGACTGTGCGGGCGCATTCTCTTCAAATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: NTPFPVAVSVCR*TVRAHSLQIWP
Trigger: TGGCCAAATTTGAAGAGAATGCGCCCGCACAGTCCATCGGCATACGGAGACAGCAACGGGAAAAGGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CCA 72 bp GAAGGGCTTTGGGTTGTTCTTTCCTTTGAAGCTGATTaGCTATCTGCTCAGCCAATGAGCTCACTCCGCCCG +
Preference number: 6 (lower is better)
Translates to: EGLWVVLSFEAD*LSAQPMSSLRP
Trigger: CGGGCGGAGTGAGCTCATTGGCTGAGCAGATAGCCAATCAGCTTCAAAGGAAAGAACAACCCAAAGCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS CCA 72 bp TTCAACTTTGAGCACTTGTGTCCCGCCTGCCTCAGGTaGACCCACCTCTCCCACAAATCAGAGCAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: FNFEHLCPACLR*THLSHKSEQEN
Trigger: ATTCTCTTGCTCTGATTTGTGGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp TACAGGCGAGGGAAGAATAAATTTGCCTCCTTCAACTTTGAGCACTaGTGTCCCGCCTGCCTCAGGTGGACCCACCTCTCCCACAAATCA +
Preference number: 6 (lower is better)
Translates to: YRRGKNKFASFNFEH*CPACLRWTHLSHKS
Trigger: TGATTTGTGGGAGAGGTGGGTCCACCTGAGGCAGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCCTCGCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp CACAATAGGTTGAATGTCCACACTGTCACCACTGAGGCAGTGAGCTaGGGACCACATTCTCCATTCTTTGCTGACCCCCTAAAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: HNRLNVHTVTTEAVS*GPHSPFFADPLKQH
Trigger: GTGCTGCTTTAGGGGGTCAGCAAAGAATGGAGAATGTGGTCCCAAGCTCACTGCCTCAGTGGTGACAGTGTGGACATTCAACCTATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp CGTCCTTCTTGCCCATGCCACCCAGATGCAAGTCGATaGGGTCACTGTAATAAGACTCTCCCCAATAGTCTG +
Preference number: 6 (lower is better)
Translates to: RPSCPCHPDASR*GHCNKTLPNSL
Trigger: CAGACTATTGGGGAGAGTCTTATTACAGTGACCTCATCGACTTGCATCTGGGTGGCATGGGCAAGAAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS CAA 72 bp TTGAATGTCCACACTGTCACCACTGAGGCAGTGAGCTaGGGACCACATTCTCCATTCTTTGCTGACCCCCTA +
Preference number: 6 (lower is better)
Translates to: LNVHTVTTEAVS*GPHSPFFADPL
Trigger: TAGGGGGTCAGCAAAGAATGGAGAATGTGGTCCCAAGCTCACTGCCTCAGTGGTGACAGTGTGGACATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp GTGCTTCCCAAGCCTACAGGCGAGGGAAGAATAAATTaGCCTCCTTCAACTTTGAGCACTTGTGTCCCGCCT +
Preference number: 6 (lower is better)
Translates to: VLPKPTGEGRIN*PPSTLSTCVPP
Trigger: AGGCGGGACACAAGTGCTCAAAGTTGAAGGAGGCAAATTTATTCTTCCCTCGCCTGTAGGCTTGGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp ACCCTTCCAAGGTGTTCCTCCGACCATCCCCACCGATaGTCACTTCAAATTCATACTCTGACACAGGATGAG +
Preference number: 6 (lower is better)
Translates to: TLPRCSSDHPHR*SLQIHTLTQDE
Trigger: CTCATCCTGTGTCAGAGTATGAATTTGAAGTGATCATCGGTGGGGATGGTCGGAGGAACACCTTGGAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp AGGCGCTGCCATACATACCACCCAGATGCAAGTCGATaGGGTCACTGTAATAAGACTCTCCCCAATAGTCTG +
Preference number: 6 (lower is better)
Translates to: RRCHTYHPDASR*GHCNKTLPNSL
Trigger: CAGACTATTGGGGAGAGTCTTATTACAGTGACCTCATCGACTTGCATCTGGGTGGTATGTATGGCAGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584751.1
CDS TCA 72 bp CCATTTGGTTATTGGGTTGATTTCTCCTTGTTTTTGTaGGCAGGGACTGGGAAGCGTGGGTGGAGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PFGYWVDFSLFL*AGTGKRGWRKG
Trigger: GCCCTTTCTCCACCCACGCTTCCCAGTCCCTGCTCACAAAAACAAGGAGAAATCAACCCAATAACCAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584751.1
CDS GCA 72 bp GTTCAGAAAAAGAGACAGATGATTTCCCGAAGCGGCTaGAAAAAGCCCACAGGAACTATGGACCACACCCTA +
Preference number: 6 (lower is better)
Translates to: VQKKRQMISRSG*KKPTGTMDHTL
Trigger: TAGGGTGTGGTCCATAGTTCCTGTGGGCTTTTTGCAGCCGCTTCGGGAAATCATCTGTCTCTTTTTCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp AGTACACATGCAGGGTTATGGAGGTTAGGGAGGTTATaGAGGTTAGGGAGCTTATGGAGGTTAGGGAGGTTA +
Preference number: 6 (lower is better)
Translates to: STHAGLWRLGRL*RLGSLWRLGRL
Trigger: TAACCTCCCTAACCTCCATAAGCTCCCTAACCTCCATAACCTCCCTAACCTCCATAACCCTGCATGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465886.1
CDS TCA 72 bp CCGTGTAGGTTCTTGGCTTTGATGCACATGATCTCCTaGATGCCAAGGCGTGTGGTACATAAATTGACTCTC +
Preference number: 6 (lower is better)
Translates to: PCRFLALMHMIS*MPRRVVHKLTL
Trigger: GAGAGTCAATTTATGTACCACACGCCTTGGCATTCAGGAGATCATGTGCATCAAAGCCAAGAACCTACACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577821.5
CDS GCA 72 bp AAACACGAGATTATTTTTCACGAAGTCACACAGGACTaGCTAGGTAGGAATCTGGGTGTGAAGATCCTAGCG +
Preference number: 6 (lower is better)
Translates to: KHEIIFHEVTQD*LGRNLGVKILA
Trigger: CGCTAGGATCTTCACACCCAGATTCCTACCTAGGCAGTCCTGTGTGACTTCGTGAAAAATAATCTCGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp TCATTCTCTTGGTCCTCAGGAGGCTGTATAAGTCCTTaGAATTCCACATTGACGTGGATTTCAATGCCTAGG +
Preference number: 6 (lower is better)
Translates to: SFSWSSGGCISP*NSTLTWISMPR
Trigger: CCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCCTGAGGACCAAGAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS CAA 72 bp TCCTCAGGAGGCTGTATAAGTCCTTGGAATTCCACATaGACGTGGATTTCAATGCCTAGGATCAAGGCTACT +
Preference number: 6 (lower is better)
Translates to: SSGGCISPWNST*TWISMPRIKAT
Trigger: AGTAGCCTTGATCCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp TTTCCTTTGAAGCTGATTGGCTATCTGCTCAGCCAATaGGCTCACTCCGCCCGTGTACATCTTTATATACTT +
Preference number: 6 (lower is better)
Translates to: FPLKLIGYLLSQ*AHSARVHLYIL
Trigger: AAGTATATAAAGATGTACACGGGCGGAGTGAGCTCATTGGCTGAGCAGATAGCCAATCAGCTTCAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585038.1
CDS TCA 72 bp CCGTGTAGGTTCTTGGCTTTGATGCACATGATCTCCTaGATGCCAAGGCGTGTGGTACATAAATTGACTTTT +
Preference number: 6 (lower is better)
Translates to: PCRFLALMHMIS*MPRRVVHKLTF
Trigger: AAAAGTCAATTTATGTACCACACGCCTTGGCATTCAGGAGATCATGTGCATCAAAGCCAAGAACCTACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 90 bp TTCTCTTGGTCCTCAGGAGGCTGTATAAGTCCTTGGAATTCCACATaGACGTGGATTTCAATGCCTAGGATCAAGGCTACTTTCAAAAGT +
Preference number: 6 (lower is better)
Translates to: FSWSSGGCISPWNST*TWISMPRIKATFKS
Trigger: ACTTTTGAAAGTAGCCTTGATCCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCCTGAGGACCAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS CAA 90 bp GAACACCCACATGCCTCTCACCTGTGTCTGCCAAAGGTTACCATTTaGCCACACGCTTCATCTATATGTCATCTTTTATATGACCTTTTG +
Preference number: 6 (lower is better)
Translates to: EHPHASHLCLPKVTI*PHASSICHLLYDLL
Trigger: CAAAAGGTCATATAAAAGATGACATATAGATGAAGCGTGTGGCAAAATGGTAACCTTTGGCAGACACAGGTGAGAGGCATGTGGGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS TCA 72 bp AGCTGCCATTTCTTGATTGTGCCCAGTAAAGGGAATTaGACTACCATCAGTAAGTGCTGTTCACCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SCHFLIVPSKGN*TTISKCCSPKA
Trigger: TGCTTTTGGTGAACAGCACTTACTGATGGTAGTTCAATTCCCTTTACTGGGCACAATCAAGAAATGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CCA 72 bp GGAGGCTGTATAAGTCCTTGGAATTCCACATTGACGTaGATTTCAATGCCTAGGATCAAGGCTACTTTCAAA +
Preference number: 6 (lower is better)
Translates to: GGCISPWNSTLT*ISMPRIKATFK
Trigger: TTTGAAAGTAGCCTTGATCCTAGGCATTGAAATCCACGTCAATGTGGAATTCCAAGGACTTATACAGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383094.7
ENST00000400561.6
ENST00000414725.6
ENST00000441493.7
ENST00000495076.5
ENST00000585038.1
ENST00000672019.1
CDS TCA 72 bp GCCGTTAAAATATGTGATTCTAGATGCTTTTCTCCTTaGGTGACCATGTGCTTGTGGAAATTCAGCCCACTT +
Preference number: 6 (lower is better)
Translates to: AVKICDSRCFSP*VTMCLWKFSPL
Trigger: AAGTGGGCTGAATTTCCACAAGCACATGGTCACTCAAGGAGAAAAGCATCTAGAATCACATATTTTAACGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS GCA 72 bp ATGCCTCTCACCTGTGTCTGCCAAAGGTTACCATTTTaGCACACGCTTCATCTATATGTCATCTTTTATATG +
Preference number: 6 (lower is better)
Translates to: MPLTCVCQRLPF*HTLHLYVIFYM
Trigger: CATATAAAAGATGACATATAGATGAAGCGTGTGGCAAAATGGTAACCTTTGGCAGACACAGGTGAGAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580469.1
CDS CAA 72 bp CATGCCTCTCACCTGTGTCTGCCAAAGGTTACCATTTaGCCACACGCTTCATCTATATGTCATCTTTTATAT +
Preference number: 6 (lower is better)
Translates to: HASHLCLPKVTI*PHASSICHLLY
Trigger: ATATAAAAGATGACATATAGATGAAGCGTGTGGCAAAATGGTAACCTTTGGCAGACACAGGTGAGAGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580469.1