RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICA (Homo sapiens)

Ensembl gene IDs: ENSG00000183214, ENSG00000231225, ENSG00000235233

Ensembl transcript IDs: ENST00000400322.5, ENST00000400325.5, ENST00000414473.6, ENST00000415525.5, ENST00000417899.5, ENST00000417943.1, ENST00000418465.5, ENST00000420259.5, ENST00000420744.5, ENST00000421350.1, ENST00000423443.5, ENST00000427477.5, ENST00000432479.6, ENST00000436191.5, ENST00000438928.5, ENST00000446505.6, ENST00000449934.7, ENST00000460798.5, ENST00000546529.3, ENST00000547609.2, ENST00000547767.2, ENST00000614103.4, ENST00000616296.4, ENST00000616968.3, ENST00000638993.1, ENST00000639458.1, ENST00000667609.1, ENST00000673647.1, ENST00000674069.1, ENST00000674131.1

Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
3UTR-3UTR TCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACACATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: WHSCKCLISTNILQPPTTHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
3UTR-3UTR TCA 90 bp TGGTACAGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACACATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: WYSCKRLISTNILQPPTTHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCTGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
3UTR-3UTR TCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: SCKCLISTNILQPPTTINHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
3UTR-3UTR TCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: CKCLISTNILQPPTTINKHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR CCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400325.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400325.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR CCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000546529.3
ENST00000547767.2
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000546529.3
ENST00000547767.2
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGGATCTCTTGACCTTGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLDLLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACAAGGTCAAGAGATC...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGGGCACAAGAAGTGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLGTRSA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCACTTCTTGTGCC...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400325.5
ENST00000460798.5
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000546529.3
ENST00000547767.2
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000546529.3
ENST00000547767.2
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCTCGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFSRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCGA...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638993.1
ENST00000639458.1
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATCGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQSRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCGA...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCGAAGACTGTGGGGCTaGGCACAGAGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAARRLWG*AQRRLP
Trigger: GGGAAGTCGCCTCTGTGCTCAGCCCCACAGTCTTCG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000674069.1
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400322.5
ENST00000400325.5
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCGATCTCTTGACCTTGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAADLLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACAAGGTCAAGAGATC...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCGGCAAGAGAAGTGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAGKRSA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCACTTCTCTTGCC...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGGGCAAGAGAAGTGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPGKRSA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCACTTCTCTTGCC...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAACGAAGACTGTGGGGCTaGGCACAGAGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIERRLWG*AQRRLP
Trigger: GGGAAGTCGCCTCTGTGCTCAGCCCCACAGTCTTCG...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCGAAGACTGTGGGGCTaGGCACAGAGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQRRLWG*AQRRLP
Trigger: GGGAAGTCGCCTCTGTGCTCAGCCCCACAGTCTTCG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000674069.1
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400322.5
ENST00000400325.5
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTCCTGCCTCAGCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAASCLSS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGCTGAGGCAGGA...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR GCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQLPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR GCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGAGGCACAAGAAGTaGTTGAACCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQLRHKK*LNPGGG
Trigger: TCCGCCTCCCGGGTTCAAGCACTTCTTGTGCCTCAG...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGTCCCACTGTTTCACTTaGCTAGCGAGCACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQSHCFT*LASTEA
Trigger: CGCCTCTGTGCTCGCTAGTCAAGTGAAACAGTGGGA...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400325.5
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCATGGTCTCGATCTCTTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAMVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAAGAGATCGAGACCAT...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGTCCTGCCTCAGCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQSCLSS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGCTGAGGCAGGA...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCGGCAAGAGAAGTGCTTaGACCCGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFGKRSA*TREAEA
Trigger: AGCCTCCGCCTCCCGGGTTCAAGCACTTCTCTTGCC...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR GCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPLPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAALPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCTGAGGCAAGAGAAGTaGTTGAACCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAALRQEK*LNPGGG
Trigger: TCCGCCTCCCGGGTTCAAGCACTTCTCTTGCCTCAG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR GCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCTGAGGCAAGAGAAGTaGTTGAACCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPLRQEK*LNPGGG
Trigger: TCCGCCTCCCGGGTTCAAGCACTTCTCTTGCCTCAG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACAGGCTGAAGTGCAGTaGCGCGATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQQAEVQ*RDLGSP
Trigger: CGGTGAGCCGAGATCGCGCCACTGCACTTCAGCCTG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420259.5
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTCCCACTGTTTCACTTaGCTAGCCAGCACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAASHCFT*LASTEA
Trigger: CGCCTCTGTGCTGGCTAGTCAAGTGAAACAGTGGGA...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418465.5
CDS-3UTR GCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQLPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGAGCTGGGTATGGTGGTaGATGTCTGTAACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLSWVWW*MSVTPA
Trigger: AGCTGGGGTTACAGACATGCACCACCATACCCAGCT...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGGGGATTTCCCCATGTTaGTCAGGTTGGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLGISPC*SGWSRA
Trigger: AGCTCGAGACCAACCTGACCAACATGGGGAAATCCC...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGCCAAGGTCTGAGCTCTaGAGGACTTCTTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLPRSEL*RTSFWS
Trigger: GGACCAGAAAGAAGTCCTCCAGAGCTCAGACCTTGG...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400322.5
ENST00000400325.5
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAATGGTCTCGATCTCTTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQMVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAAGAGATCGAGACCAT...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR GCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCTCGACCTCCCAAAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAALDLPK*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFLPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCTCGACCTCCCAAAGTaGTGGGATTGCAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQLDLPK*WDCRRE
Trigger: TTCACGCCTGCAATCCCAGCACTTTGGGAGGTCGAG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420259.5
CDS-3UTR GCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACTGAGGCAAGAGAAGTaGTTGAACCCGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQLRQEK*LNPGGG
Trigger: TCCGCCTCCCGGGTTCAAGCACTTCTCTTGCCTCAG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGGGGATTTCCCCATGTTaGTCAGGTTGGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPGISPC*SGWSRA
Trigger: AGCTCGAGACCAACCTGACCAACATGGGGAAATCCC...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCAGCCTCCCGACTAGCTaGGATTACAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESSLPTS*DYRHSP
Trigger: TGGTGAATGCCTGTAATCCCAGCTAGTCGGGAGGCT...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGTTAGTTTGGCCTCCATaGAAGACTGGAGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLLVWPP*KTGVTF
Trigger: GAAGGTCACTCCAGTCTTTCATGGAGGCCAAACTAA...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400322.5
ENST00000400325.5
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400325.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAGATCTCTTGACCTTGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTDLLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACAAGGTCAAGAGATC...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGAGGGTTTCACCATGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQRVSPC*SGWSRS
Trigger: AGATCGAGACCATCCTGATCAACATGGTGAAACCCT...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR GCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAACTCGACCTCCCAAAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIELDLPK*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAG...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGGGGATTTCCCCATGTTaGTCAGGTTGGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQGISPC*SGWSRA
Trigger: AGCTCGAGACCAACCTGACCAACATGGGGAAATCCC...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAAAAAATTCCAGTGGGCTaGAGACCCTATCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIEKIPVG*RPYPTR
Trigger: CCTGGTGGGATAGGGTCTCCAGCCCACTGGAATTTT...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000400325.5
CDS-3UTR CCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTTAGTTTGGCCTCCATaGAAGACTGGAGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAALVWPP*KTGVTF
Trigger: GAAGGTCACTCCAGTCTTTCATGGAGGCCAAACTAA...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR TCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAACATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIEHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400322.5
ENST00000400325.5
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAAPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400325.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR GCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCTCGACCTCCCAAAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFLDLPK*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR GCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACTCGACCTCCCAAAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQLDLPK*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCGGGATTTCCCCATGTTaGTCAGGTTGGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFGISPC*SGWSRA
Trigger: AGCTCGAGACCAACCTGACCAACATGGGGAAATCCC...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAAGCCTCCCGACTAGCTaGGATTACAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQSLPTS*DYRHSP
Trigger: TGGTGAATGCCTGTAATCCCAGCTAGTCGGGAGGCT...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCAGCCTCCCGACTAGCTaGGATTACAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFSLPTS*DYRHSP
Trigger: TGGTGAATGCCTGTAATCCCAGCTAGTCGGGAGGCT...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGCTGAAAATCTTCCCAGGCTaGTCTGAGTGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIESQLKIFPG*SECSVY
Trigger: GTAAACACTGCACTCAGACCAGCCTGGGAAGATTTT...CAGCTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400325.5
CDS-3UTR CCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATCAGCGGCTCAAGCAGTaGCCGGGGAGAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINQRLKQ*PGRRRR
Trigger: GCGGCGCCTTCTCCCCGGCCACTGCTTGAGCCGCTG...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000546529.3
ENST00000547767.2
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCATAGGTCAGGAAACTaGGGCACCAAGAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFHRSGN*GTKRES
Trigger: ACTTTCCCTCTTGGTGCCTCAGTTTCCTGACCTATG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
ENST00000674069.1
CDS-3UTR TCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp TGGTACAGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATGGTCTCGATCTCTTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WYSCKRLISTNILQPPTTMVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAAGAGATCGAGACCAT...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCTGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGAAAATCTTCCCAGGCTaGTCTGAGTGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPKIFPG*SECSVY
Trigger: GTAAACACTGCACTCAGACCAGCCTGGGAAGATTTT...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415525.5
ENST00000427477.5
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAAAAGAGAAAATTCCAGTaGGCTGGAGACCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIEKRKFQ*AGDPIP
Trigger: TGGGATAGGGTCTCCAGCCCACTGGAATTTTCTCTT...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400325.5
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTAGTTTGGCCTCCATaGAAGACTGGAGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQLVWPP*KTGVTF
Trigger: GAAGGTCACTCCAGTCTTTCATGGAGGCCAAACTAA...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR TCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAAGGGTTTCACCATGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQRVSPC*SGWSRS
Trigger: AGATCGAGACCATCCTGATCAACATGGTGAAACCCT...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAAAAGAGAAAATTCCAGTaGGCTGGAGACCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQKRKFQ*AGDPIP
Trigger: TGGGATAGGGTCTCCAGCCCACTGGAATTTTCTCTT...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
CDS-3UTR TCA 90 bp AGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SCKRLISTNILQPPTTINEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436191.5
ENST00000460798.5
ENST00000547609.2
CDS-3UTR TCA 90 bp AGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATTCCTGCCTCAGCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: SCKRLISTNILQPPTTINSCLSS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGCTGAGGCAGGA...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAGGGATTTCCCCATGTTaGTCAGGTTGGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTGISPC*SGWSRA
Trigger: AGCTCGAGACCAACCTGACCAACATGGGGAAATCCC...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAAGCCTCCCGACTAGCTaGGATTACAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTSLPTS*DYRHSP
Trigger: TGGTGAATGCCTGTAATCCCAGCTAGTCGGGAGGCT...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAAAAATTCCAGTGGGCTaGAGACCCTATCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTKIPVG*RPYPTR
Trigger: CCTGGTGGGATAGGGTCTCCAGCCCACTGGAATTTT...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
CDS-3UTR CCA 90 bp TGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCT +
Preference number: 4 (lower is better)
Translates to: CKRLISTNILQPPTTINKGNLVT*PGPPTA
Trigger: AGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCC...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR TCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR GCA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR GCA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: TKRESACEIQAGNSIPAALIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR GCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCTTAATATGGTACAGCTaGAAACGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESLIWYS*KRLIST
Trigger: AGTAGATATGAGGCGTTTGCAGCTGTACCATATTAA...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436191.5
ENST00000460798.5
CDS-3UTR TCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACATTAGTTTGGCCTCCATaGAAGACTGGAGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTLVWPP*KTGVTF
Trigger: GAAGGTCACTCCAGTCTTTCATGGAGGCCAAACTAA...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR TCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGGAGCCAGGGTCATCCTaGGGTCCTTTCCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKEPGSS*GPFRSL
Trigger: CAGGGAACGGAAAGGACCTCAGGATGACCCTGGCTC...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACACCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp TGGTACAGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACACCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: WYSCKRLISTNILQPPTTPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCTGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460798.5
ENST00000547609.2
CDS-3UTR GCA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR GCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGTTGCCCAGGCTGAAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKLPRLK*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTTCAGCCTGGGCAA...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR GCA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR GCA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR CCA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAAAAATCTTCCCAGGCTaGTCTGAGTGCAGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: WHSCKCLISTNILQPPTTKIFPG*SECSVY
Trigger: GTAAACACTGCACTCAGACCAGCCTGGGAAGATTTT...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415525.5
ENST00000427477.5
CDS-3UTR TCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGTCCCACTGTTTCACTTaGCTAGCGAGCACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKSHCFT*LASTEA
Trigger: CGCCTCTGTGCTCGCTAGTCAAGTGAAACAGTGGGA...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415525.5
ENST00000427477.5
CDS-3UTR GCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATCTCGACCTCCCAAAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINLDLPK*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAG...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAGCCTCCCGACTAGCTaGGATTACAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINSLPTS*DYRHSP
Trigger: TGGTGAATGCCTGTAATCCCAGCTAGTCGGGAGGCT...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAAATTCCAGTGGGCTaGAGACCCTATCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINKIPVG*RPYPTR
Trigger: CCTGGTGGGATAGGGTCTCCAGCCCACTGGAATTTT...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
CDS-3UTR CCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGAAAATTCCAGTGGGCTaGAGACCCTATCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKKIPVG*RPYPTR
Trigger: CCTGGTGGGATAGGGTCTCCAGCCCACTGGAATTTT...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
CDS-3UTR TCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATTTAGTTTGGCCTCCATaGAAGACTGGAGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINLVWPP*KTGVTF
Trigger: GAAGGTCACTCCAGTCTTTCATGGAGGCCAAACTAA...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR TCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR GCA 90 bp TGGTACAGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACATTAATATGGTACAGCTaGAAACGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: WYSCKRLISTNILQPPTTLIWYS*KRLIST
Trigger: AGTAGATATGAGGCGTTTGCAGCTGTACCATATTAA...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCTGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436191.5
ENST00000460798.5
CDS-3UTR CCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAAATCTTCCCAGGCTaGTCTGAGTGCAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINKIFPG*SECSVY
Trigger: GTACACACTGCACTCAGACCAGCCTGGGAAGATTTT...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418465.5
CDS-3UTR TCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGCCTTCAAGAAATTCCTaGCGTTCATGGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKPSRNS*RSWPRS
Trigger: AGACCTTGGCCATGAACGTCAGGAATTTCTTGAAGG...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000432479.6
ENST00000446505.6
ENST00000449934.7
ENST00000546529.3
ENST00000547767.2
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000638993.1
ENST00000639458.1
CDS-3UTR TCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGAGGGTTTCACCATGTTaGTCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKRVSPC*SGWSRS
Trigger: AGATCGAGACCATCCTGATCAACATGGTGAAACCCT...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR GCA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: SCKCLISTNILQPPTTINLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR GCA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGTTAATATGGCACAGCTaGAAATGCCTCATATCTACT +
Preference number: 4 (lower is better)
Translates to: CKCLISTNILQPPTTINKLIWHS*KCLIST
Trigger: AGTAGATATGAGGCATTTGCAGCTGTGCCATATTAA...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000414473.6
ENST00000415525.5
ENST00000417899.5
ENST00000417943.1
ENST00000418465.5
ENST00000420259.5
ENST00000420744.5
ENST00000421350.1
ENST00000423443.5
ENST00000427477.5
ENST00000432479.6
ENST00000438928.5
ENST00000446505.6
ENST00000449934.7
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCACCGTGCCCGGCCTaGGCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPPPCPA*AACVLN
Trigger: ATTCAAAACACATGCGGCCAAGGCCGGGCACGGTGG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAACCACCGTGCCCGGCCTaGGCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIEPPCPA*AACVLN
Trigger: ATTCAAAACACATGCGGCCAAGGCCGGGCACGGTGG...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCACCGTGCCCGGCCTaGGCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQPPCPA*AACVLN
Trigger: ATTCAAAACACATGCGGCCAAGGCCGGGCACGGTGG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPRDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCACCGTGCCCGGCCTaGCCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQPPCPA*PACVLN
Trigger: ATTCAAAACACATGCGGGCAAGGCCGGGCACGGTGG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420259.5
CDS-3UTR CAA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCCACCGTGCCCGGCCTaGGCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFPPCPA*AACVLN
Trigger: ATTCAAAACACATGCGGCCAAGGCCGGGCACGGTGG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAACGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIERDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...TTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQRDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCTCCCACTGTTTCACTaGACTAGCGAGCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESLPLFH*TSEHRG
Trigger: GCCTCTGTGCTCGCTAGTCAAGTGAAACAGTGGGAG...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400325.5
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCTCCCACTGTTTCACTaGACTAGCGAGCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPLPLFH*TSEHRG
Trigger: GCCTCTGTGCTCGCTAGTCAAGTGAAACAGTGGGAG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415525.5
ENST00000427477.5
CDS-3UTR CAA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: TEAPRGKVLVRSRQGIQFRDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...GAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAAACTGAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAACGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: ETEAPRGKVLVRSRQGIQRDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...TTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCCAGGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIESQEFSLL*PRLKCN
Trigger: ATTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...CTGGGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCTCCCACTGTTTCACTaGACTAGCGAGCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQLPLFH*TSEHRG
Trigger: GCCTCTGTGCTCGCTAGTCAAGTGAAACAGTGGGAG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415525.5
ENST00000427477.5
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCTCCCACTGTTTCACTaGACTAGCCAGCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQLPLFH*TSQHRG
Trigger: GCCTCTGTGCTGGCTAGTCAAGTGAAACAGTGGGAG...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418465.5
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPEFSLL*PRLKCN
Trigger: ATTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: TKRESACEIQAGNSIPAAEFSLL*PRLKCN
Trigger: ATTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCCAGGGTTTCACCATGTaGATCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: TKRESACEIQAGNSIPAAQGFTM*IRMVSI
Trigger: GATCGAGACCATCCTGATCAACATGGTGAAACCCTG...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCAGGGTTTCACCATGTaGATCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPQGFTM*IRMVSI
Trigger: GATCGAGACCATCCTGATCAACATGGTGAAACCCTG...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CAA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACACCACCGTGCCCGGCCTaGGCCGCATGTGTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: WHSCKCLISTNILQPPTTPPCPA*AACVLN
Trigger: ATTCAAAACACATGCGGCCAAGGCCGGGCACGGTGG...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQEFSLL*PRLKCN
Trigger: ATTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp ACTGAGGCACCAAGAGGGAAAGTGCTCGTGAGATCCAGGCAGGGAATTGAATCCATTTACACCCTTAGTTaGGCCTCCATGAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: TEAPRGKVLVRSRQGIESIYTLS*ASMKDW
Trigger: CCAGTCTTTCATGGAGGCCAAACTAAGGGTGTAAAT...GGATTCAATTCCCTGCCTGGATCTCACGAGCACTTTCCCTCTTGGTGCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400322.5
CDS-3UTR CAA 90 bp GCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGATTTACACCCTTAGTTaGGCCTCCATGAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: APRGKVLVRSRQGIQFQPIYTLS*ASMKDW
Trigger: CCAGTCTTTCATGGAGGCCAAACTAAGGGTGTAAAT...CGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp ACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGCCGCCATTTACACCCTTAGTTaGGCCTCCATGAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: TKRESACEIQAGNSIPAAIYTLS*ASMKDW
Trigger: CCAGTCTTTCATGGAGGCCAAACTAAGGGTGTAAAT...GGCGGCTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp GAGGCACCAAGAGGGAAAGTGCTTGTGAGATCCAGGCAGGGAATTCAATTCCAGATTTACACCCTTAGTTaGGCCTCCATGAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: EAPRGKVLVRSRQGIQFQIYTLS*ASMKDW
Trigger: CCAGTCTTTCATGGAGGCCAAACTAAGGGTGTAAAT...CTGGAATTGAATTCCCTGCCTGGATCTCACAAGCACTTTCCCTCTTGGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
ENST00000674069.1
CDS-3UTR CAA 90 bp AGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAGGCACAAGAAGTGCTaGAACCCGGGAGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SCKRLISTNILQPPTTINRHKKC*NPGGGG
Trigger: GCCTCCGCCTCCCGGGTTCAAGCACTTCTTGTGCCT...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CAA 90 bp TGGCACAGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: WHSCKCLISTNILQPPTTEFSLL*PRLKCS
Trigger: ACTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...TGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420259.5
CDS-3UTR CAA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGCGGGATTTCCCCATGTaGGTCAGGTTGGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: CKCLISTNILQPPTTINKRDFPM*VRLVSS
Trigger: GCTCGAGACCAACCTGACCAACATGGGGAAATCCCG...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CAA 90 bp AGCTGCAAACGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATCAGGGTTTCACCATGTaGATCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: SCKRLISTNILQPPTTINQGFTM*IRMVSI
Trigger: GATCGAGACCATCCTGATCAACATGGTGAAACCCTG...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCGTTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460798.5
CDS-3UTR CAA 90 bp AGCTGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATGAGTTTTCCCTCTTGTaGCCCAGGCTGAAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: SCKCLISTNILQPPTTINEFSLL*PRLKCN
Trigger: ATTGCACTTCAGCCTGGGCAACAAGAGGGAAAACTC...ATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417899.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS-3UTR CAA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGCAGGGTTTCACCATGTaGATCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: CKCLISTNILQPPTTINKQGFTM*IRMVSI
Trigger: GATCGAGACCATCCTGATCAACATGGTGAAACCCTG...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414473.6
ENST00000432479.6
ENST00000446505.6
CDS-3UTR CAA 90 bp TGCAAATGCCTCATATCTACTAACATTTTGCAGCCTCCAACAACAATAAATAAGATTTACACCCTTAGTTaGGCCTCCATGAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: CKCLISTNILQPPTTINKIYTLS*ASMKDW
Trigger: CCAGTCTTTCATGGAGGCCAAACTAAGGGTGTAAAT...CTTATTTATTGTTGTTGGAGGCTGCAAAATGTTAGTAGATATGAGGCATTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417899.5
ENST00000420259.5
ENST00000438928.5
ENST00000614103.4
ENST00000616296.4
ENST00000616968.3
CDS CCA 72 bp TGGCCGGGGAGAAGGCGCCGCGGAAACTTAGTCACCTaGCCCGGTCCCCCGACCGCTCATCCAATGAAACTG +
Preference number: 6 (lower is better)
Translates to: WPGRRRRGNLVT*PGPPTAHPMKL
Trigger: CAGTTTCATTGGATGAGCGGTCGGGGGACCGGGCCAGGTGACTAAGTTTCCGCGGCGCCTTCTCCCCGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400325.5
ENST00000415525.5
ENST00000418465.5
ENST00000427477.5
ENST00000673647.1
ENST00000674131.1
CDS TCA 72 bp TCCCAGGCTGGTCTGAGTGCAGTGTGTACAACTAATTaGTCACAACCAGTTATAGATGTCTTTGTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SQAGLSAVCTTN*SQPVIDVFVSS
Trigger: AGAAGAAACAAAGACATCTATAACTGGTTGTGATCAATTAGTTGTACACACTGCACTCAGACCAGCCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418465.5
CDS TCA 72 bp TCCCAGGCTGGTCTGAGTGCAGTGTTTACAACTAATTaGTCACAACCAGTTATAGATGTCTTTGTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SQAGLSAVFTTN*SQPVIDVFVSS
Trigger: AGAAGAAACAAAGACATCTATAACTGGTTGTGATCAATTAGTTGTAAACACTGCACTCAGACCAGCCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400325.5
ENST00000415525.5
ENST00000427477.5
ENST00000667609.1
ENST00000673647.1
ENST00000674131.1