RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIAT (Homo sapiens)

Ensembl gene IDs: ENSG00000225783

Ensembl transcript IDs: ENST00000413665.5, ENST00000418918.5, ENST00000419237.1, ENST00000421867.6, ENST00000422403.5, ENST00000425476.5, ENST00000430483.5, ENST00000436238.6, ENST00000439738.5, ENST00000440347.5, ENST00000449717.1, ENST00000450203.5, ENST00000451141.1, ENST00000452429.5, ENST00000453023.1, ENST00000455640.5, ENST00000458302.5, ENST00000613780.4, ENST00000616213.4, ENST00000616469.4, ENST00000620145.4, ENST00000643002.1, ENST00000643270.1, ENST00000656640.1, ENST00000660931.1, ENST00000665574.1, ENST00000668051.1, ENST00000669142.1, ENST00000670887.1

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AACTCGGGTCCGCGGTCCTGCGGCGCTAGTGCAGAGGGCTCTTTGTaGCCCGGCTCACAGCGCAGAACTGGGGGAGCCCCTGCAAGCGCC +
Preference number: 5 (lower is better)
Translates to: NSGPRSCGASAEGSL*PGSQRRTGGAPASA
Trigger: GGCGCTTGCAGGGGCTCCCCCAGTTCTGCGCTGTGAGCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGGACCCGAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp CCATCTCAAACTCCTCCCCGCACTCGTCCGCAGCCTCCCTCCCTCTaGTCCCGCGAGCGCAGCCGGCGTCGTCTTTGTAGCTGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: PSQTPPRTRPQPPSL*SRERSRRRLCSCRA
Trigger: GGCGCGGCAGCTACAAAGACGACGCCGGCTGCGCTCGCGGGACCAGAGGGAGGGAGGCTGCGGACGAGTGCGGGGAGGAGTTTGAGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422403.5
ENST00000452429.5
CDS GCA 90 bp CAGATGCCTCCAACCGCGCCCAGAGTCCTGGCCAGGAAAGCGGGGTaGAACCGGTCTTGGAGGGAGCACTCCGCAGCCCCCGCCGCACAA +
Preference number: 5 (lower is better)
Translates to: QMPPTAPRVLARKAG*NRSWREHSAAPAAQ
Trigger: TTGTGCGGCGGGGGCTGCGGAGTGCTCCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGTTGGAGGCATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425476.5
ENST00000436238.6
ENST00000439738.5
CDS GCA 90 bp GGCCCAGCAGGCAGGGCCCGAGCAGGTGAGGAGGGAGTAGTGGGCTaGCAGGCCTCCCTCATACCCCTGGAGCTGTCCTCCAGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GPAGRARAGEEGVVG*QASLIPLELSSRAR
Trigger: TCTGGCTCTGGAGGACAGCTCCAGGGGTATGAGGGAGGCCTGGCAGCCCACTACTCCCTCCTCACCTGCTCGGGCCCTGCCTGCTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp GTGTGGCCCCGGCTTAGCGGCTGGCGGGCTCTGGGGGAGGCTGGCTaGGGCAGTGACGTCCGTGGGAACAGAGAGCCAGAGATGCATTCC +
Preference number: 5 (lower is better)
Translates to: VWPRLSGWRALGEAG*GSDVRGNREPEMHS
Trigger: GGAATGCATCTCTGGCTCTCTGTTCCCACGGACGTCACTGCCTCAGCCAGCCTCCCCCAGAGCCCGCCAGCCGCTAAGCCGGGGCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp GTCTTTGTAGCTGCCGCGCCCAGAGTCCTGGCCAGGAAAGCGGGGTaGAACCGGTCTTGGAGGGAGCACTCCGCAGCCCCCGCCGCACAA +
Preference number: 5 (lower is better)
Translates to: VFVAAAPRVLARKAG*NRSWREHSAAPAAQ
Trigger: TTGTGCGGCGGGGGCTGCGGAGTGCTCCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGCAGCTACAAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422403.5
CDS CCA 90 bp CCATCTCAAACTCCTCCCCGCACTCGTCCGCAGCCTCCCTCCCTCTaGTCCCGCGAGCGCAGCCGGCGTCGTCTTTGTAGCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSQTPPRTRPQPPSL*SRERSRRRLCSCCS
Trigger: GCTGCAGCAGCTACAAAGACGACGCCGGCTGCGCTCGCGGGACCAGAGGGAGGGAGGCTGCGGACGAGTGCGGGGAGGAGTTTGAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413665.5
ENST00000616469.4
CDS GCA 90 bp GCGTCCCCAGCATCTGGCTCAGAGAAGTTGCTTGGTCCATGCCGGTaGTGGCAGCATCCAGCCGACACACAGGCAGCCCAGGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ASPASGSEKLLGPCR*WQHPADTQAAQAPS
Trigger: GCTGGGAGCCTGGGCTGCCTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 90 bp TGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTGGAACCACATaGGTGGACAGATGCCTCCAACTCGGGTCCGCGGTCCTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: CRRGHGGHMNVSGTT*VDRCLQLGSAVLRR
Trigger: GCGCCGCAGGACCGCGGACCCGAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000453023.1
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000670887.1
CDS GCA 90 bp CACAGCGTCCCGGCTGAGCCCTGGGTTAGTAGGTTAATCACACCATaGAACACTGCCCCGGCCCCTCCAGCTGCAGCTTCAGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HSVPAEPWVSRLITP*NTAPAPPAAASEAS
Trigger: GGAGGCCTCTGAAGCTGCAGCTGGAGGGGCCGGGGCAGTGTTGCATGGTGTGATTAACCTACTAACCCAGGGCTCAGCCGGGACGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp ACCTCTGCGTCCCCAGCATCTGGCTCAGAGAAGTTGCTTGGTCCATaGCGGTGCTGGCAGCATCCAGCCGACACACAGGCAGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TSASPASGSEKLLGP*RCWQHPADTQAAQA
Trigger: AGCCTGGGCTGCCTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 90 bp TGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTGGAACCACATaGGTGGACAGATGCCTCCAACCGCGCCCAGAGTCCTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CRRGHGGHMNVSGTT*VDRCLQPRPESWPG
Trigger: TCCTGGCCAGGACTCTGGGCGCGGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425476.5
ENST00000436238.6
ENST00000439738.5
ENST00000455640.5
CDS CCA 90 bp TCCAAGGTCACCCGAGGTCCAAAGAGAAGTCCAGGCCAGGAGTCCTaGAGATGCGGCCCAGATGGAGCCACCTGGCAGCATCCAGCCGAC +
Preference number: 5 (lower is better)
Translates to: SKVTRGPKRSPGQES*RCGPDGATWQHPAD
Trigger: GTCGGCTGGATGCTGCCAGGTGGCTCCATCTGGGCCGCATCTCCAGGACTCCTGGCCTGGACTTCTCTTTGGACCTCGGGTGACCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616213.4
ENST00000616469.4
ENST00000665574.1
CDS CCA 90 bp AAGGCCAGGCACCTCGTCACACGCCACAGCGTCCCGGCTGAGCCCTaGGTTAGTAGGTTAATCACACCATGCAACACTGCCCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KARHLVTRHSVPAEP*VSRLITPCNTAPAP
Trigger: AGGGGCCGGGGCAGTGTTGCATGGTGTGATTAACCTACTAACCCAGGGCTCAGCCGGGACGCTGTGGCGTGTGACGAGGTGCCTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACTCGGGTCCGCGGT +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTRVRG
Trigger: ACCGCGGACCCGAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000453023.1
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000670887.1
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACCGCGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTAPRV
Trigger: GACTCTGGGCGCGGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000425476.5
ENST00000436238.6
ENST00000439738.5
ENST00000455640.5
CDS CCA 90 bp GTGGTTAGTAGGGCATGCTCGGGCCTGGTTAGTGGGTTAGTTGGTTaGCAGAAGGCCAGGCACCTCGTCACACGCCACAGCGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: VVSRACSGLVSGLVG*QKARHLVTRHSVPA
Trigger: AGCCGGGACGCTGTGGCGTGTGACGAGGTGCCTGGCCTTCTGCCAACCAACTAACCCACTAACCAGGCCCGAGCATGCCCTACTAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp TGGGTTCACCTCTGCGTCCCCAGCATCTGGCTCAGAGAAGTTGCTTaGTCCATGCCGGTGCTGGCAGCATCCAGCCGACACACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: WVHLCVPSIWLREVA*SMPVLAASSRHTGS
Trigger: GCTGCCTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGTGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS TCA 90 bp CCTGCACTGAGCCCTGCCAGTTCCATATGTCCTCCGAAGCACTCCTaGGCCACCCCAGCATGGTACCTGCCACTCTCCGTGTCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PALSPASSICPPKHS*ATPAWYLPLSVSAS
Trigger: GGAAGCAGACACGGAGAGTGGCAGGTACCATGCTGGGGTGGCTCAGGAGTGCTTCGGAGGACATATGGAACTGGCAGGGCTCAGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS TCA 90 bp GCATTCCTGGCCGGCCTGAGCATCTGCGGGAACCCTGTGAGCCCCTaGGGTTCACTTCTTGCTCCCCACTTCTCTCTCCTGCAAACTCCG +
Preference number: 5 (lower is better)
Translates to: AFLAGLSICGNPVSP*GSLLAPHFSLLQTP
Trigger: CGGAGTTTGCAGGAGAGAGAAGTGGGGAGCAAGAAGTGAACCTCAGGGGCTCACAGGGTTCCCGCAGATGCTCAGGCCGGCCAGGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp TCTCTGGGTTCACCTCTGCGTCCCCAGCATCTGGCTCAGAGAAGTTaGTTGGTCCATGCCGGTGCTGGCAGCATCCAGCCGACACACAGG +
Preference number: 5 (lower is better)
Translates to: SLGSPLRPQHLAQRS*LVHAGAGSIQPTHR
Trigger: CCTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGTGAACCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 90 bp TGGAACCCCCAGACAGGGCCAGGTTGGTTGTTAGTGGTCAGCCCCTaGGGCAGTCAGGGTGAGGCAGGGATTAGCTGGGTGAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: WNPQTGPGWLLVVSP*GSQGEAGISWVRAR
Trigger: TCTTGCTCTCACCCAGCTAATCCCTGCCTCACCCTGACTGCCCCAGGGGCTGACCACTAACAACCAACCTGGCCCTGTCTGGGGGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACTGGCTTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTGLSG
Trigger: CCCAGACAAGCCAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000660931.1
ENST00000669142.1
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACACCTCGTGGGACT +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTPRGT
Trigger: AGTCCCACGAGGTGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS CCA 90 bp GGAGGCCACAAGCTGCTCTCTTGCAAACGCTGGGACTGTCTCCTCTaGAGGGAGCTGGAATTGCAGATTGTGGGGCCTGTCCTGCCACCT +
Preference number: 5 (lower is better)
Translates to: GGHKLLSCKRWDCLL*RELELQIVGPVLPP
Trigger: AGGTGGCAGGACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCTTGTGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp CTGCTCTCTGTAAATAGACCCTGGACTGCTCAGAGGAGCCTGGCTTaGTCCACAGTGACCCTTTCCCCTCGTTCTGTGGACCCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: LLSVNRPWTAQRSLA*STVTLSPRSVDPRP
Trigger: TGGGCGCGGGTCCACAGAACGAGGGGAAAGGGTCACTGTGGATCAAGCCAGGCTCCTCTGAGCAGTCCAGGGTCTATTTACAGAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451141.1
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACCGTGAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTVRFI
Trigger: GATGAACCTCACGGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450203.5
CDS CCA 90 bp CCCAGCGGGCTAGAAAACCACCGGAGTCTGACCGCTAAGTCACTGTaGCCAGAATCCAAGGTCACCCGAGGTCCAAAGAGAAGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PSGLENHRSLTAKSL*PESKVTRGPKRSPG
Trigger: GCCTGGACTTCTCTTTGGACCTCGGGTGACCTTGGATTCTGGCCACAGTGACTTAGCGGTCAGACTCCGGTGGTTTTCTAGCCCGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp AGCTGCTCTCTTGCAAACGCTGGGACTGTCTCCTCTGGAGGGAGCTaGAATTGCAGATTGTGGGGCCTGTCCTGCCACCTTCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SCSLANAGTVSSGGS*NCRLWGLSCHLLFP
Trigger: GGGGAACAGAAGGTGGCAGGACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp GGCCAAAACCTTGCAAGACTGGCTATACTTCTGACCCCACCTTGGTaGGTACCACTGCTCCATCAGGCCTGGTCCACACCAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GQNLARLAILLTPPW*VPLLHQAWSTPEPW
Trigger: CCAGGGCTCTGGTGTGGACCAGGCCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAGGTTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp CAGATGGGATCATGTCTCTGGGTTCACCTCTGCGTCCCCAGCATCTaGCTCAGAGAAGTTGCTTGGTCCATGCCGGTGCTGGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: QMGSCLWVHLCVPSI*LREVAWSMPVLAAS
Trigger: GGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGTGAACCCAGAGACATGATCCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS TCA 90 bp CTCAACAATCTGCATCCAGATCCTGGCCGCATAGAGCCCTCTCCCTaGCCCTGTCCCACGACACCTTCTGAGGCTCCCATCATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LNNLHPDPGRIEPSP*PCPTTPSEAPIIFH
Trigger: GTGGAAGATGATGGGAGCCTCAGAAGGTGTCGTGGGACAGGGTCAGGGAGAGGGCTCTATGCGGCCAGGATCTGGATGCAGATTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000668051.1
ENST00000669142.1
CDS GCA 90 bp AACTCATCCCCACCCACACTCCACCCAGCCACAGCTCAGCTTAGATaGCTCCCTCTCCAGAAAGCCACCACAGGGTGGATTAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: NSSPPTLHPATAQLR*LPLQKATTGWIRCL
Trigger: GAGACACCTAATCCACCCTGTGGTGGCTTTCTGGAGAGGGAGGCATCTAAGCTGAGCTGTGGCTGGGTGGAGTGTGGGTGGGGATGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp TGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTGGAACCACATaGGTGGACAGATGCCTCCAACTGCGTAACTCTCAGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CRRGHGGHMNVSGTT*VDRCLQLRNSQLLL
Trigger: GAGAAGCAGCTGAGAGTTACGCAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430483.5
ENST00000458302.5
ENST00000668051.1
CDS GCA 90 bp TCTCTTGCAAACGCTGGGACTGTCTCCTCTGGAGGGAGCTGGAATTaGAGATTGTGGGGCCTGTCCTGCCACCTTCTGTTCCCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: SLANAGTVSSGGSWN*RLWGLSCHLLFPKN
Trigger: GTTCTTGGGGAACAGAAGGTGGCAGGACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS GCA 90 bp AGAGTTAGCGCAAGGGAGCCAGAGATTAGCCCAAAGAAACCAAGGTaGCTACTGGAGGTGAGGCATGAAATCACCCCCAGGTGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RVSAREPEISPKKPR*LLEVRHEITPRCGP
Trigger: GGGGCCACACCTGGGGGTGATTTCATGCCTCACCTCCAGTAGGCACCTTGGTTTCTTTGGGCTAATCTCTGGCTCCCTTGCGCTAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ACCCCTGTGATGCCGACGGGGTCATGGTGGCCACATGAACGTGTCTaGAACCACATGGGTGGACAGATGCCTCCAACTGTAATACCAGCT +
Preference number: 5 (lower is better)
Translates to: TPVMPTGSWWPHERV*NHMGGQMPPTVIPA
Trigger: AGCTGGTATTACAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440347.5
CDS CCA 90 bp AACGCTGGGACTGTCTCCTCTGGAGGGAGCTGGAATTGCAGATTGTaGGGCCTGTCCTGCCACCTTCTGTTCCCCAAGAACAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: NAGTVSSGGSWNCRL*GLSCHLLFPKNRIQ
Trigger: CTGGATTCTGTTCTTGGGGAACAGAAGGTGGCAGGACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp CCTGCCTTAGACCTGGCCCAGTGGACTCTGATCTTACAGCCAATATaGGGCAGCAAAGTGGGACATCTGTCTACAGGGCCAGTAGCCCCA +
Preference number: 5 (lower is better)
Translates to: PALDLAQWTLILQPI*GSKVGHLSTGPVAP
Trigger: TGGGGCTACTGGCCCTGTAGACAGATGTCCCACTTTGCTGCCCCATATTGGCTGTAAGATCAGAGTCCACTGGGCCAGGTCTAAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp AATGGCCAAAACCTTGCAAGACTGGCTATACTTCTGACCCCACCTTaGTGGGTACCACTGCTCCATCAGGCCTGGTCCACACCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: NGQNLARLAILLTPP*WVPLLHQAWSTPEP
Trigger: GGGCTCTGGTGTGGACCAGGCCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAGGTTTTGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp GCTCTGCTCCTGCCACACTGGGTGGCCCTGGAACCCTTCCTGCCTTaGCATTCACTCAAGGTGCACGGTAATCACCCATTGTTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: ALLLPHWVALEPFLP*HSLKVHGNHPLFEA
Trigger: TGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGAAGGGTTCCAGGGCCACCCAGTGTGGCAGGAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp AGCCTGCTCATGCTCTCTGTCCCTCTCCACAGAGAAAAGGCCATGTaGGGACATAGTGAGAAGGTGCCACCTGCAAGCCAAGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLLMLSVPLHREKAM*GHSEKVPPASQGER
Trigger: CCTCTCTCCTTGGCTTGCAGGTGGCACCTTCTCACTATGTCCTCACATGGCCTTTTCTCTGTGGAGAGGGACAGAGAGCATGAGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS GCA 90 bp TGTGCCCTCTGCAGCTCAGGCCTCTGGATCACCCTTCACCCCCACTaGCAACTACAATTGGTTAGCTCTGAGTCCACAGTTGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: CALCSSGLWITLHPH*QLQLVSSESTVARE
Trigger: TTCTCTGGCAACTGTGGACTCAGAGCTAACCAATTGTAGTTGGCAGTGGGGGTGAAGGGTGATCCAGAGGCCTGAGCTGCAGAGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp ACTCTCCCACTAGGCTATAAAAGCACCATGACGAAAAAGCCCAGGTaGAGGTCCCAGCGCCCAGAGCAGTGCCTGGCACATAGTAGATCC +
Preference number: 5 (lower is better)
Translates to: TLPLGYKSTMTKKPR*RSQRPEQCLAHSRS
Trigger: GGATCTACTATGTGCCAGGCACTGCTCTGGGCGCTGGGACCTGCACCTGGGCTTTTTCGTCATGGTGCTTTTATAGCCTAGTGGGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp CTGGGACCAGGATCAGCTCTTGCAAGCTTACTCCACACTTGTATCTaGCCCTTGCAGCCATGCATGACAAATGGGCTCCCTCCCCAATGG +
Preference number: 5 (lower is better)
Translates to: LGPGSALASLLHTCI*PLQPCMTNGLPPQW
Trigger: CCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp AGCTCTCTCAGCATATCTTCAGAGCTTGCTGTCAGCACCCGGGAGTaGGGGCACGAGTCCAGAACTGGAGATGAGCTCAGACACTTACAC +
Preference number: 5 (lower is better)
Translates to: SSLSISSELAVSTRE*GHESRTGDELRHLH
Trigger: GTGTAAGTGTCTGAGCTCATCTCCAGTTCTGGACTCGTGCCCCCACTCCCGGGTGCTGACAGCAAGCTCTGAAGATATGCTGAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CCA 90 bp ACGTGTCTGGAACCACATGGGTGGACAGATGCCTCCAACACCTCGTaGGACTGTTGTGATAACGCTTGCAAAGCACCAAGCACGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TCLEPHGWTDASNTS*DCCDNACKAPSTSL
Trigger: CAGGGACGTGCTTGGTGCTTTGCAAGCGTTATCACAACAGTCCCACGAGGTGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS CCA 90 bp AGTCTAGACCAACAGGCCTCCACACTCACGTCCCAGAGATTTCCCTaGTCCCACCTACTCCCAGTGGCAACCAGACTTCTGCACATAGGA +
Preference number: 5 (lower is better)
Translates to: SLDQQASTLTSQRFP*SHLLPVATRLLHIG
Trigger: TCCTATGTGCAGAAGTCTGGTTGCCACTGGGAGTAGGTGGGACCAGGGAAATCTCTGGGACGTGAGTGTGGAGGCCTGTTGGTCTAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp GCTCAGGCCTCTGGATCACCCTTCACCCCCACTGCCAACTACAATTaGTTAGCTCTGAGTCCACAGTTGCCAGAGAAAAGGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: AQASGSPFTPTANYN*LALSPQLPEKRALS
Trigger: GCTGAGAGCCCTTTTCTCTGGCAACTGTGGACTCAGAGCTAACCAATTGTAGTTGGCAGTGGGGGTGAAGGGTGATCCAGAGGCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ACAGACCACCCACTTCAAGCCAAGGTCAGTCGGGAAAGCCACGATTaGGGAACTGGAACCCAGAGGGTCATCAGAAGTCTCTCCCACCTT +
Preference number: 5 (lower is better)
Translates to: TDHPLQAKVSRESHD*GTGTQRVIRSLSHL
Trigger: AAGGTGGGAGAGACTTCTGATGACCCTCTGGGTTCCAGTTCCCCAATCGTGGCTTTCCCGACTGACCTTGGCTTGAAGTGGGTGGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS TCA 90 bp CTGCTCTCTGTAAATAGACCCTGGACTGCTCAGAGGAGCCTGGCTTaGTCCACAGTGACCCTTTCCCCTCGTTCTGTGGACCTTGGTTAC +
Preference number: 5 (lower is better)
Translates to: LLSVNRPWTAQRSLA*STVTLSPRSVDLGY
Trigger: GTAACCAAGGTCCACAGAACGAGGGGAAAGGGTCACTGTGGATCAAGCCAGGCTCCTCTGAGCAGTCCAGGGTCTATTTACAGAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418918.5
ENST00000439738.5
ENST00000449717.1
ENST00000452429.5
ENST00000613780.4
ENST00000616469.4
CDS TCA 90 bp CTGCTCTCTGTAAATAGACCCTGGACTGCTCAGAGGAGCCTGGCTTaGTCCACAGTGACCCTTTCCCCTCGTTCTGTGGACCTAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LLSVNRPWTAQRSLA*STVTLSPRSVDLES
Trigger: TGACTCTAGGTCCACAGAACGAGGGGAAAGGGTCACTGTGGATCAAGCCAGGCTCCTCTGAGCAGTCCAGGGTCTATTTACAGAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665574.1
CDS CCA 90 bp TTAAACTTGCCTAAGGGAGGCCACAAGCTGCTCTCTTGCAAACGCTaGGACTGTCTCCTCTGGAGGGAGCTGGAATTGCAGATTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LNLPKGGHKLLSCKR*DCLLWRELELQIVG
Trigger: CCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCTTGTGGCCTCCCTTAGGCAAGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp AGAGTTCAACAGCACAGGGGGAAGGCTCCAGCTCCTCCCAGATCCTaGCTGTCTCCTCTTTGTAACCATCAGGGAGAGGAAAAGCATGGA +
Preference number: 5 (lower is better)
Translates to: RVQQHRGKAPAPPRS*LSPLCNHQGEEKHG
Trigger: TCCATGCTTTTCCTCTCCCTGATGGTTACAAAGAGGAGACAGTCAGGATCTGGGAGGAGCTGGAGCCTTCCCCCTGTGCTGTTGAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp AAGATATGCCCAATGGCCAAAACCTTGCAAGACTGGCTATACTTCTaGCCCCACCTTGGTGGGTACCACTGCTCCATCAGGCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: KICPMAKTLQDWLYF*PHLGGYHCSIRPGP
Trigger: TGGACCAGGCCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAGGTTTTGGCCATTGGGCATATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp TGCTACATTCCACATGAACCTTCCAGAACCTCTTTGGATCCTCTCTaGTCCCCAGAAACTGGTGTCCACCACTCTCGCTGCCCGGAACTC +
Preference number: 5 (lower is better)
Translates to: CYIPHEPSRTSLDPL*SPETGVHHSRCPEL
Trigger: GAGTTCCGGGCAGCGAGAGTGGTGGACACCAGTTTCTGGGGATCAGAGAGGATCCAAAGAGGTTCTGGAAGGTTCATGTGGAATGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp ATCTGGCTTTTAAACTTGCCTAAGGGAGGCCACAAGCTGCTCTCTTaGAAACGCTGGGACTGTCTCCTCTGGAGGGAGCTGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: IWLLNLPKGGHKLLS*KRWDCLLWRELELQ
Trigger: CTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCTTGTGGCCTCCCTTAGGCAAGTTTAAAAGCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS GCA 90 bp GAGTTGGTGAGTCTTATTTGCATTCTCTGTCCTGGAACGTGGGTCTaGACAAAGATCCCAGCCCATAGGCAGAGCCTTCTGGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ELVSLICILCPGTWV*TKIPAHRQSLLEPW
Trigger: CCAAGGCTCCAGAAGGCTCTGCCTATGGGCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp GAGGAAGAATGTGGGGAAGTGACATGGATTCAAAGCCAAGTGTCTTaGCCCAGGCAGAAGGATCTGTGTGCAGAACACCCAGAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EEECGEVTWIQSQVS*PRQKDLCAEHPERP
Trigger: TGGCCTCTCTGGGTGTTCTGCACACAGATCCTTCTGCCTGGGGCAAGACACTTGGCTTTGAATCCATGTCACTTCCCCACATTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp GGACCACCTCTTCCTCCTCTGAGTCTTGTTAATAGGGCCATCCCCTaGCTTAGACCTGGCCCAGTGGACTCTGATCTTACAGCCAATATG +
Preference number: 5 (lower is better)
Translates to: GPPLPPLSLVNRAIP*LRPGPVDSDLTANM
Trigger: CATATTGGCTGTAAGATCAGAGTCCACTGGGCCAGGTCTAAGGCAGGGGATGGCCCTATTAACAAGACTCAGAGGAGGAAGAGGTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp AGTGCCACCTTTTACCTGCACCTGGAATCCCTTGCGTATGCTCCCTaGCCCTCTACTCCCAAAGGACGTTCCCTCAGTCTAAAGAGATCA +
Preference number: 5 (lower is better)
Translates to: SATFYLHLESLAYAP*PSTPKGRSLSLKRS
Trigger: TGATCTCTTTAGACTGAGGGAACGTCCTTTGGGAGTAGAGGGGCAGGGAGCATACGCAAGGGATTCCAGGTGCAGGTAAAAGGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp GTGGCAGAGTTGGTGAGTCTTATTTGCATTCTCTGTCCTGGAACGTaGGTCTGCACAAAGATCCCAGCCCATAGGCAGAGCCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VAELVSLICILCPGT*VCTKIPAHRQSLLE
Trigger: CTCCAGAAGGCTCTGCCTATGGGCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp CTGCTCTCTGTAAATAGACCCTGGACTGCTCAGAGGAGCCTGGCTTaGTCCACAGTGACCCTTTCCCCTCGTTCTGTGGACCTTAAGATT +
Preference number: 5 (lower is better)
Translates to: LLSVNRPWTAQRSLA*STVTLSPRSVDLKI
Trigger: AATCTTAAGGTCCACAGAACGAGGGGAAAGGGTCACTGTGGATCAAGCCAGGCTCCTCTGAGCAGTCCAGGGTCTATTTACAGAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453023.1
CDS TCA 90 bp AGCAGCGATCTGATTGGAGAAGAGTGTCCTGAGACTGGGCTAAGGTaGCCCCTTAAGCCTTTGGGTAAGACTGGTTCCCTTTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: SSDLIGEECPETGLR*PLKPLGKTGSLWMA
Trigger: TGCCATCCAAAGGGAACCAGTCTTACCCAAAGGCTTAAGGGGTCACCTTAGCCCAGTCTCAGGACACTCTTCTCCAATCAGATCGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 90 bp TGGAGCCACCCCCTTGCCGAGACTGTAATAAAGCGTGTTCTGACATaGAGATCTGAGCAGATGGGATCATGTCTCTGGGTTCACCTCTGC +
Preference number: 5 (lower is better)
Translates to: WSHPLAETVIKRVLT*RSEQMGSCLWVHLC
Trigger: GCAGAGGTGAACCCAGAGACATGATCCCATCTGCTCAGATCTTCATGTCAGAACACGCTTTATTACAGTCTCGGCAAGGGGGTGGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS GCA 90 bp GCCTGGCACAGAGTAGGTGCACATCAATCTTGTCTGTCTCCTTGGTaGTCCCACAGACCCCTGACCAATCATAACACCCATCTCACTGAA +
Preference number: 5 (lower is better)
Translates to: AWHRVGAHQSCLSPW*SHRPLTNHNTHLTE
Trigger: TTCAGTGAGATGGGTGTTATGATTGGTCAGGGGTCTGTGGGAGCACCAAGGAGACAGACAAGATTGATGTGCACCTACTCTGTGCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp CCCACCAAGGCATATTTTTCCCTCTCTGGGACCAGGATCAGCTCTTaGAAGCTTACTCCACACTTGTATCTGCCCCTTGCAGCCATGCAT +
Preference number: 5 (lower is better)
Translates to: PTKAYFSLSGTRISS*KLTPHLYLPLAAMH
Trigger: ATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAGAGAGGGAAAAATATGCCTTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ATCCTGCCCTGGGAAGAAGCATGGATCACAGCCAGAGAAAGGACCTaGCTTGTCTGGGTTGATGATGCCGTCTTCATCTCTTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: ILPWEEAWITARERT*LVWVDDAVFISCSE
Trigger: TTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTCCTTTCTCTGGCTGTGATCCATGCTTCTTCCCAGGGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668051.1
CDS GCA 90 bp ACTGGGTGGCCCTGGAACCCTTCCTGCCTTGACATTCACTCAAGGTaGACGGTAATCACCCATTGTTTGAAGCAATGGATGGGAAATGGA +
Preference number: 5 (lower is better)
Translates to: TGWPWNPSCLDIHSR*TVITHCLKQWMGNG
Trigger: TCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGAAGGGTTCCAGGGCCACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp TCTAAGACATCTTTTCTCTCTTGTGCCCTCTGCAGCTCAGGCCTCTaGATCACCCTTCACCCCCACTGCCAACTACAATTGGTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: SKTSFLSCALCSSGL*ITLHPHCQLQLVSS
Trigger: AGAGCTAACCAATTGTAGTTGGCAGTGGGGGTGAAGGGTGATCCAGAGGCCTGAGCTGCAGAGGGCACAAGAGAGAAAAGATGTCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp ATGTGGCCAGAGGCCATTGCAAACTCCTCTGAGTTCCACCTGGGCTaGAAAAGCCAAATGGCCAGCCTAAAACTCAAATCCACTAACTCC +
Preference number: 5 (lower is better)
Translates to: MWPEAIANSSEFHLG*KSQMASLKLKSTNS
Trigger: GGAGTTAGTGGATTTGAGTTTTAGGCTGGCCATTTGGCTTTTCCAGCCCAGGTGGAACTCAGAGGAGTTTGCAATGGCCTCTGGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp GGCTGCAGAAATGCAGTCCCCTTTCAGGGACTTACCTGGCTTGTCTaGGTTGATGATGCCGTCTTCATCTCTTGCTCTGAACATCTGTTC +
Preference number: 5 (lower is better)
Translates to: GCRNAVPFQGLTWLV*VDDAVFISCSEHLF
Trigger: GAACAGATGTTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTAAGTCCCTGAAAGGGGACTGCATTTCTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS TCA 90 bp GATGCCGTCTTCATCTCTTGCTCTGAACATCTGTTCCTGTCACCTTaGTCCTATCTACCTGTCTCTATTCCTGTGGCCTGTGGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: DAVFISCSEHLFLSP*SYLPVSIPVACGPL
Trigger: GAGAGGACCACAGGCCACAGGAATAGAGACAGGTAGATAGGATCAAGGTGACAGGAACAGATGTTCAGAGCAAGAGATGAAGACGGCATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000660931.1
ENST00000668051.1
ENST00000669142.1
CDS TCA 90 bp ACCCGGCACCATGTCCATGTCTCCTATCTCTTGCTACATTCCACATaGACCTTCCAGAACCTCTTTGGATCCTCTCTGATCCCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TRHHVHVSYLLLHST*TFQNLFGSSLIPRN
Trigger: GTTTCTGGGGATCAGAGAGGATCCAAAGAGGTTCTGGAAGGTTCATGTGGAATGTAGCAAGAGATAGGAGACATGGACATGGTGCCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp CCCGGAGGCCTTCCACATATGTTTGCCAGAAGAATGACTAAATCTTaGAGCTTCCAATGCTGCGGTTCTGGAGGGCTTCTCAGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: PGGLPHMFARRMTKS*SFQCCGSGGLLRKH
Trigger: GTGCTTTCTGAGAAGCCCTCCAGAACCGCAGCATTGGAAGCTTCAAGATTTAGTCATTCTTCTGGCAAACATATGTGGAAGGCCTCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
CDS GCA 90 bp CTCAAACTCACTCAACAGGAAGTGGCAGAGTTGGTGAGTCTTATTTaGATTCTCTGTCCTGGAACGTGGGTCTGCACAAAGATCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LKLTQQEVAELVSLI*ILCPGTWVCTKIPA
Trigger: GGCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp TTCTTGGCAACCAGACCCGGCACCATGTCCATGTCTCCTATCTCTTaGTACATTCCACATGAACCTTCCAGAACCTCTTTGGATCCTCTC +
Preference number: 5 (lower is better)
Translates to: FLATRPGTMSMSPIS*YIPHEPSRTSLDPL
Trigger: GAGAGGATCCAAAGAGGTTCTGGAAGGTTCATGTGGAATGTAGCAAGAGATAGGAGACATGGACATGGTGCCGGGTCTGGTTGCCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp AAGGTGCACGGTAATCACCCATTGTTTGAAGCAATGGATGGGAAATaGAAGGGACCCTTCTGCCCAGCCTCAGTTATTTTTCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: KVHGNHPLFEAMDGK*KGPFCPASVIFLLP
Trigger: GGGGAGCAGAAAAATAACTGAGGCTGGGCAGAAGGGTCCCTTCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp CAAAGCAGACTGAATGAGGGAGGGGTCGAAGAGAATGTGCCTGCTTaGGCTCAGCCTCCTCTAATATTGTCAAGATGCACACACACTCTT +
Preference number: 5 (lower is better)
Translates to: QSRLNEGGVEENVPA*AQPPLILSRCTHTL
Trigger: AAGAGTGTGTGTGCATCTTGACAATATTAGAGGAGGCTGAGCCCAAGCAGGCACATTCTCTTCGACCCCTCCCTCATTCAGTCTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp TCTTCTCCTGCAGACTCTGACTACCAGACTGAGTCAGCAAAACCTTaGACTAGTGCCACCTTTTACCTGCACCTGGAATCCCTTGCGTAT +
Preference number: 5 (lower is better)
Translates to: SSPADSDYQTESAKP*TSATFYLHLESLAY
Trigger: ATACGCAAGGGATTCCAGGTGCAGGTAAAAGGTGGCACTAGTTCAAGGTTTTGCTGACTCAGTCTGGTAGTCAGAGTCTGCAGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp GCTCTTGCAAGCTTACTCCACACTTGTATCTGCCCCTTGCAGCCATaGATGACAAATGGGCTCCCTCCCCAATGGAATTATCTTATAGAC +
Preference number: 5 (lower is better)
Translates to: ALASLLHTCICPLQP*MTNGLPPQWNYLID
Trigger: GTCTATAAGATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp AGGACATACGGATTTCGTGATGGATCTGATCTCAAAGCATTAAGCTaGTCTCTACCATCCCCAGTGGACACAGGAAGAGAGGGAGGATCA +
Preference number: 5 (lower is better)
Translates to: RTYGFRDGSDLKALS*SLPSPVDTGREGGS
Trigger: TGATCCTCCCTCTCTTCCTGTGTCCACTGGGGATGGTAGAGACCAGCTTAATGCTTTGAGATCAGATCCATCACGAAATCCGTATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413665.5
ENST00000425476.5
ENST00000453023.1
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS TCA 90 bp GAGGTGACTTACTCAAACTCACTCAACAGGAAGTGGCAGAGTTGGTaGGTCTTATTTGCATTCTCTGTCCTGGAACGTGGGTCTGCACAA +
Preference number: 5 (lower is better)
Translates to: EVTYSNSLNRKWQSW*VLFAFSVLERGSAQ
Trigger: TTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAGTAAGTCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp ACTCGCATTCTACCACTGAGGAAACTGAGGTTGAGAGAAGTGAGGTaGCTTACTCAAACTCACTCAACAGGAAGTGGCAGAGTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: TRILPLRKLRLREVR*LTQTHSTGSGRVGE
Trigger: CTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAGTAAGTCACCTCACTTCTCTCAACCTCAGTTTCCTCAGTGGTAGAATGCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp GTGCACATCAATCTTGTCTGTCTCCTTGGTGCTCCCACAGACCCCTaGCCAATCATAACACCCATCTCACTGAATCACTATCTACTTCAC +
Preference number: 5 (lower is better)
Translates to: VHINLVCLLGAPTDP*PIITPISLNHYLLH
Trigger: GTGAAGTAGATAGTGATTCAGTGAGATGGGTGTTATGATTGGTCAGGGGTCTGTGGGAGCACCAAGGAGACAGACAAGATTGATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp GGTAGAAAAGAGAATGAGCTACATCACCCATTTCCCCTCCCACTTTaGCATTCTAGGATACTACACTTTCCTGCACAGACCAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GRKENELHHPFPLPL*HSRILHFPAQTRRG
Trigger: CCCTCTTCTGGTCTGTGCAGGAAAGTGTAGTATCCTAGAATGCCAAAGTGGGAGGGGAAATGGGTGATGTAGCTCATTCTCTTTTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000413665.5
ENST00000419237.1
ENST00000421867.6
ENST00000422403.5
ENST00000425476.5
ENST00000430483.5
ENST00000436238.6
ENST00000439738.5
ENST00000450203.5
ENST00000451141.1
ENST00000452429.5
ENST00000453023.1
ENST00000455640.5
ENST00000458302.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CCA 90 bp GACATTCACTCAAGGTGCACGGTAATCACCCATTGTTTGAAGCAATaGATGGGAAATGGAAGGGACCCTTCTGCCCAGCCTCAGTTATTT +
Preference number: 5 (lower is better)
Translates to: DIHSRCTVITHCLKQ*MGNGRDPSAQPQLF
Trigger: AAATAACTGAGGCTGGGCAGAAGGGTCCCTTCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp CTTACTCCACACTTGTATCTGCCCCTTGCAGCCATGCATGACAAATaGGCTCCCTCCCCAATGGAATTATCTTATAGACTTGCAGCCTAT +
Preference number: 5 (lower is better)
Translates to: LTPHLYLPLAAMHDK*APSPMELSYRLAAY
Trigger: ATAGGCTGCAAGTCTATAAGATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp TTTGTTTTTGGTAACAACTGTGCTGTCTTCATCAACTGGCAGACCTaGGTCAGGAGAGTCAGGGAGCTCTCTCAGCATATCTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: FVFGNNCAVFINWQT*VRRVRELSQHIFRA
Trigger: AGCTCTGAAGATATGCTGAGAGAGCTCCCTGACTCTCCTGACTCAGGTCTGCCAGTTGATGAAGACAGCACAGTTGTTACCAAAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CCA 90 bp CAAGGAGAGAGGCCTCACCAGAAACCAAGTCTTAACACCTTGATCTaGACTTTCCAGCCTCCAGAACTGGCAGAAAATAAATTCCTGATG +
Preference number: 5 (lower is better)
Translates to: QGERPHQKPSLNTLI*TFQPPELAENKFLM
Trigger: CATCAGGAATTTATTTTCTGCCAGTTCTGGAGGCTGGAAAGTCCAGATCAAGGTGTTAAGACTTGGTTTCTGGTGAGGCCTCTCTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 90 bp GGGAACAAAAGGTTCATTACCCACCAAGGCATATTTTTCCCTCTCTaGGACCAGGATCAGCTCTTGCAAGCTTACTCCACACTTGTATCT +
Preference number: 5 (lower is better)
Translates to: GNKRFITHQGIFFPL*DQDQLLQAYSTLVS
Trigger: AGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAGAGAGGGAAAAATATGCCTTGGTGGGTAATGAACCTTTTGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 90 bp TCTGATTCTCCATGTGAGCTGGTTTTATCCCATCCAGCATGGCTGTaGAATCCTAAAGGTTCAAACCCCAGCCACTCTTCACCTATATTT +
Preference number: 5 (lower is better)
Translates to: SDSPCELVLSHPAWL*NPKGSNPSHSSPIF
Trigger: AAATATAGGTGAAGAGTGGCTGGGGTTTGAACCTTTAGGATTTCACAGCCATGCTGGATGGGATAAAACCAGCTCACATGGAGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS TCA 90 bp ATAGACAAGGAAACTGAAGATAAACAGACACAACTAGAAGGGATCTaGGCCAAATTTCAGTCTCAACAATCTGCATCCAGATCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: IDKETEDKQTQLEGI*AKFQSQQSASRSWP
Trigger: CGGCCAGGATCTGGATGCAGATTGTTGAGACTGAAATTTGGCTCAGATCCCTTCTAGTTGTGTCTGTTTATCTTCAGTTTCCTTGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000668051.1
ENST00000669142.1
CDS GCA 90 bp AAAGTCCCTTCCAGAAAAACTCCCGTTTCCTCGGTGCAGCTAAATTaGACAGAAGAGTTTATGCTAGAAGAGCTAAAAGTTAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: KVPSRKTPVSSVQLN*TEEFMLEELKVRTG
Trigger: TCCTGTTCTAACTTTTAGCTCTTCTAGCATAAACTCTTCTGTGCAATTTAGCTGCACCGAGGAAACGGGAGTTTTTCTGGAAGGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 90 bp TCCGAGCCTTTATTTTCACCTTGGTCCTCTTTACTTTCCAGTCATTaGAGAGATACTTCCAACTGGGGTAGACATGTATGGATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SEPLFSPWSSLLSSH*RDTSNWGRHVWILF
Trigger: AAACAGAATCCATACATGTCTACCCCAGTTGGAAGTATCTCTGCAATGACTGGAAAGTAAAGAGGACCAAGGTGAAAATAAAGGCTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 90 bp CCTTGGTCCTCTTTACTTTCCAGTCATTGCAGAGATACTTCCAACTaGGGTAGACATGTATGGATTCTGTTTATCAAAAGATGGACCAAA +
Preference number: 5 (lower is better)
Translates to: PWSSLLSSHCRDTSN*GRHVWILFIKRWTK
Trigger: TTTGGTCCATCTTTTGATAAACAGAATCCATACATGTCTACCCCAGTTGGAAGTATCTCTGCAATGACTGGAAAGTAAAGAGGACCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp GCTGCCGCGCCCAGAGTCCTGGCCAGGAAAGCGGGGTaGAACCGGTCTTGGAGGGAGCACTCCGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: AAAPRVLARKAG*NRSWREHSAAP
Trigger: GGGGGCTGCGGAGTGCTCCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422403.5
ENST00000452429.5
CDS GCA 72 bp GGACCCGCGCCCAGAGTCCTGGCCAGGAAAGCGGGGTaGAACCGGTCTTGGAGGGAGCACTCCGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: GPAPRVLARKAG*NRSWREHSAAP
Trigger: GGGGGCTGCGGAGTGCTCCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451141.1
CDS GCA 72 bp CCGCGGTCCTGCGGCGCTAGTGCAGAGGGCTCTTTGTaGCCCGGCTCACAGCGCAGAACTGGGGGAGCCCCT +
Preference number: 6 (lower is better)
Translates to: PRSCGASAEGSL*PGSQRRTGGAP
Trigger: AGGGGCTCCCCCAGTTCTGCGCTGTGAGCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp CCAACCGCGCCCAGAGTCCTGGCCAGGAAAGCGGGGTaGAACCGGTCTTGGAGGGAGCACTCCGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PTAPRVLARKAG*NRSWREHSAAP
Trigger: GGGGGCTGCGGAGTGCTCCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425476.5
ENST00000436238.6
ENST00000439738.5
ENST00000455640.5
CDS CAA 72 bp GGTCCGCGGTCCTGCGGCGCTAGTGCAGAGGGCTCTTaGTGCCCCGGCTCACAGCGCAGAACTGGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: GPRSCGASAEGS*CPGSQRRTGGA
Trigger: GGCTCCCCCAGTTCTGCGCTGTGAGCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp GGGTGGACAGATGCCTCCAACTCGGGTCCGCGGTCCTaGGGCGCTAGTGCAGAGGGCTCTTTGTGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: GWTDASNSGPRS*GASAEGSLCPG
Trigger: GCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGGACCCGAGTTGGAGGCATCTGTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413665.5
ENST00000422403.5
ENST00000452429.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000670887.1
CDS GCA 72 bp TCCCAGGAACTTGCTGCTCTCTCGGGTCCGCGGTCCTaGGGCGCTAGTGCAGAGGGCTCTTTGTGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: SQELAALSGPRS*GASAEGSLCPG
Trigger: GCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGGACCCGAGAGAGCAGCAAGTTCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419237.1
CDS GCA 72 bp ATCACAGCCAGAGAAAGGACCTCGGGTCCGCGGTCCTaGGGCGCTAGTGCAGAGGGCTCTTTGTGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: ITARERTSGPRS*GASAEGSLCPG
Trigger: GCCGGGGCACAAAGAGCCCTCTGCACTAGCGCCGCAGGACCGCGGACCCGAGGTCCTTTCTCTGGCTGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458302.5
CDS CCA 72 bp TGGGTGGACAGATGCCTCCAACCGCGCCCAGAGTCCTaGCCAGGAAAGCGGGGTGCAACCGGTCTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: WVDRCLQPRPES*PGKRGATGLGG
Trigger: CCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGTTGGAGGCATCTGTCCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425476.5
ENST00000436238.6
ENST00000439738.5
ENST00000455640.5
CDS CCA 72 bp CTTTCCCCTCGTTCTGTGGACCCGCGCCCAGAGTCCTaGCCAGGAAAGCGGGGTGCAACCGGTCTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LSPRSVDPRPES*PGKRGATGLGG
Trigger: CCCTCCAAGACCGGTTGCACCCCGCTTTCCTGGCCAGGACTCTGGGCGCGGGTCCACAGAACGAGGGGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451141.1
CDS CCA 72 bp AAGGACTTCCGGTCACGGCCCCACGTCTACTTACGGTaGGGGAAACCGGCCTCTCTCGGCTCCAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: KDFRSRPHVYLR*GKPASLGSREG
Trigger: CCCCTCTCTGGAGCCGAGAGAGGCCGGTTTCCCCCACCGTAAGTAGACGTGGGGCCGTGACCGGAAGTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp ACCCGAGGTCCAAAGAGAAGTCCAGGCCAGGAGTCCTaGAGATGCGGCCCAGATGGAGCCACCCCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: TRGPKRSPGQES*RCGPDGATPLP
Trigger: CGGCAAGGGGGTGGCTCCATCTGGGCCGCATCTCCAGGACTCCTGGCCTGGACTTCTCTTTGGACCTCGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS TCA 72 bp ACCTACCAGCCCTCTCCATCCTTTTGGAGCCAAATTTaGCGCCGGACATCTCGGGTCCGCGGTCCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: TYQPSPSFWSQI*RRTSRVRGPAA
Trigger: CGCCGCAGGACCGCGGACCCGAGATGTCCGGCGTCAAATTTGGCTCCAAAAGGATGGAGAGGGCTGGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS TCA 72 bp GCCGGCCTGAGCATCTGCGGGAACCCTGTGAGCCCCTaGGGTTCACTTCTTGCTCCCCACTTCTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: AGLSICGNPVSP*GSLLAPHFSLL
Trigger: CAGGAGAGAGAAGTGGGGAGCAAGAAGTGAACCTCAGGGGCTCACAGGGTTCCCGCAGATGCTCAGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp GCATCTGGCTCAGAGAAGTTGCTTGGTCCATGCCGGTaGTGGCAGCATCCAGCCGACACACAGGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: ASGSEKLLGPCR*WQHPADTQAAQ
Trigger: CTGGGCTGCCTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 72 bp AGGGCATGCTCGGGCCTGGTTAGTGGGTTAGTTGGTTaGCAGAAGGCCAGGCACCTCGTCACACGCCACAGC +
Preference number: 6 (lower is better)
Translates to: RACSGLVSGLVG*QKARHLVTRHS
Trigger: GCTGTGGCGTGTGACGAGGTGCCTGGCCTTCTGCCAACCAACTAACCCACTAACCAGGCCCGAGCATGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp CCTCTGCGTCCCCAGCATCTGGCTCAGAGAAGTTGCTaGGTCCATGCCGGTGCTGGCAGCATCCAGCCGACA +
Preference number: 6 (lower is better)
Translates to: PLRPQHLAQRSC*VHAGAGSIQPT
Trigger: TGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CAA 90 bp GTCTCTGGGTTCACCTCTGCGTCCCCAGCATCTGGCTCAGAGAAGTaGCTTGGTCCATGCCGGTGCTGGCAGCATCCAGCCGACACACAG +
Preference number: 6 (lower is better)
Translates to: VSGFTSASPASGSEK*LGPCRCWQHPADTQ
Trigger: CTGTGTGTCGGCTGGATGCTGCCAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGTGAACCCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS TCA 72 bp AGCCCTGCCAGTTCCATATGTCCTCCGAAGCACTCCTaGGCCACCCCAGCATGGTACCTGCCACTCTCCGTG +
Preference number: 6 (lower is better)
Translates to: SPASSICPPKHS*ATPAWYLPLSV
Trigger: CACGGAGAGTGGCAGGTACCATGCTGGGGTGGCTCAGGAGTGCTTCGGAGGACATATGGAACTGGCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS TCA 72 bp GGCTTGCCTGAGGTCTCCGTTTCAATACAGCCATGCTaGCGGTGTCATCCCAGGGTCTCCAGGGACCCCAGC +
Preference number: 6 (lower is better)
Translates to: GLPEVSVSIQPC*RCHPRVSRDPS
Trigger: GCTGGGGTCCCTGGAGACCCTGGGATGACACCGTCAGCATGGCTGTATTGAAACGGAGACCTCAGGCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS GCA 72 bp CCGGCTGAGCCCTGGGTTAGTAGGTTAATCACACCATaGAACACTGCCCCGGCCCCTCCAGCTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: PAEPWVSRLITP*NTAPAPPAAAS
Trigger: TGAAGCTGCAGCTGGAGGGGCCGGGGCAGTGTTGCATGGTGTGATTAACCTACTAACCCAGGGCTCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp AGAGTCAGGGAGCTCTCTCAGCATATCTTCAGAGCTTaGTGTCAGCACCCGGGAGTGGGGGCACGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: RVRELSQHIFRA*CQHPGVGARVQ
Trigger: CTGGACTCGTGCCCCCACTCCCGGGTGCTGACAGCAAGCTCTGAAGATATGCTGAGAGAGCTCCCTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CCA 72 bp CACCTCGTCACACGCCACAGCGTCCCGGCTGAGCCCTaGGTTAGTAGGTTAATCACACCATGCAACACTGCC +
Preference number: 6 (lower is better)
Translates to: HLVTRHSVPAEP*VSRLITPCNTA
Trigger: GGCAGTGTTGCATGGTGTGATTAACCTACTAACCCAGGGCTCAGCCGGGACGCTGTGGCGTGTGACGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GAGAGTCAGGGAGCTCTCTCAGCATATCTTCAGAGCTaGCTGTCAGCACCCGGGAGTGGGGGCACGAGTCCA +
Preference number: 6 (lower is better)
Translates to: ESQGALSAYLQS*LSAPGSGGTSP
Trigger: TGGACTCGTGCCCCCACTCCCGGGTGCTGACAGCAAGCTCTGAAGATATGCTGAGAGAGCTCCCTGACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CAA 90 bp CTGAGTCAGGAGAGTCAGGGAGCTCTCTCAGCATATCTTCAGAGCTaGCTGTCAGCACCCGGGAGTGGGGGCACGAGTCCAGAACTGGAG +
Preference number: 6 (lower is better)
Translates to: LSQESQGALSAYLQS*LSAPGSGGTSPELE
Trigger: CTCCAGTTCTGGACTCGTGCCCCCACTCCCGGGTGCTGACAGCAAGCTCTGAAGATATGCTGAGAGAGCTCCCTGACTCTCCTGACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS TCA 72 bp ACAGGAAGAGAGGGAGGATCACCTTGGTTACCCCTGTaGTGCCGACGGGGTCATGGTGGCCACATGAACGTG +
Preference number: 6 (lower is better)
Translates to: TGREGGSPWLPL*CRRGHGGHMNV
Trigger: CACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGTAACCAAGGTGATCCTCCCTCTCTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413665.5
ENST00000425476.5
ENST00000453023.1
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS TCA 72 bp TGTCCCAGGAACTTGCTGCTCTCTTGGTTACCCCTGTaGTGCCGACGGGGTCATGGTGGCCACATGAACGTG +
Preference number: 6 (lower is better)
Translates to: CPRNLLLSWLPL*CRRGHGGHMNV
Trigger: CACGTTCATGTGGCCACCATGACCCCGTCGGCATCACAGGGGTAACCAAGAGAGCAGCAAGTTCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000421867.6
ENST00000422403.5
ENST00000430483.5
ENST00000436238.6
ENST00000440347.5
ENST00000450203.5
ENST00000458302.5
ENST00000616213.4
ENST00000620145.4
ENST00000643270.1
ENST00000668051.1
CDS TCA 72 bp CAGCCCCTTCCCAGAGGGCTGGATCCTGTTACACTCTaGCAGACACACGCACACCCGCATCTCTCCGCAAAA +
Preference number: 6 (lower is better)
Translates to: QPLPRGLDPVTL*QTHAHPHLSAK
Trigger: TTTTGCGGAGAGATGCGGGTGTGCGTGTGTCTGTCAGAGTGTAACAGGATCCAGCCCTCTGGGAAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp CTACCTGTCTCTATTCCTGTGGCCTGTGGTCCTCTCTaGAGACACAGAGGCCGACTCCCACACCACCCTCAT +
Preference number: 6 (lower is better)
Translates to: LPVSIPVACGPL*RHRGRLPHHPH
Trigger: ATGAGGGTGGTGTGGGAGTCGGCCTCTGTGTCTGCAGAGAGGACCACAGGCCACAGGAATAGAGACAGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000660931.1
ENST00000668051.1
ENST00000669142.1
CDS GCA 72 bp TGCTCCTGCCACACTGGGTGGCCCTGGAACCCTTCCTaGCTTGACATTCACTCAAGGTGCACGGTAATCACC +
Preference number: 6 (lower is better)
Translates to: CSCHTGWPWNPS*LDIHSRCTVIT
Trigger: GGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGAAGGGTTCCAGGGCCACCCAGTGTGGCAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp CCTAAGGGAGGCCACAAGCTGCTCTCTTGCAAACGCTaGGACTGTCTCCTCTGGAGGGAGCTGGAATTGCAG +
Preference number: 6 (lower is better)
Translates to: PKGGHKLLSCKR*DCLLWRELELQ
Trigger: CTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCTTGTGGCCTCCCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp CAACAGGCCTCCACACTCACGTCCCAGAGATTTCCCTaGTCCCACCTACTCCCAGTGGCAACCAGACTTCTG +
Preference number: 6 (lower is better)
Translates to: QQASTLTSQRFP*SHLLPVATRLL
Trigger: CAGAAGTCTGGTTGCCACTGGGAGTAGGTGGGACCAGGGAAATCTCTGGGACGTGAGTGTGGAGGCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp TCAACCCGACAACTAACGCCCTCTAGCTTCCGGGAATaGGACGGATCTTTCCCAAGGACTTCCGGTCACGGC +
Preference number: 6 (lower is better)
Translates to: STRQLTPSSFRE*DGSFPRTSGHG
Trigger: GCCGTGACCGGAAGTCCTTGGGAAAGATCCGTCCCATTCCCGGAAGCTAGAGGGCGTTAGTTGTCGGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp TCATGTCTCTGGGTTCACCTCTGCGTCCCCAGCATCTaGCTCAGAGAAGTTGCTTGGTCCATGCCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SCLWVHLCVPSI*LREVAWSMPVL
Trigger: CAGCACCGGCATGGACCAAGCAACTTCTCTGAGCCAGATGCTGGGGACGCAGAGGTGAACCCAGAGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CAA 72 bp ACGAGGGTGGGTTACCTACCAGCCCTCTCCATCCTTTaGGAGCCAAATTTGACGCCGGACATCTCGGGTCCG +
Preference number: 6 (lower is better)
Translates to: TRVGYLPALSIL*EPNLTPDISGP
Trigger: CGGACCCGAGATGTCCGGCGTCAAATTTGGCTCCAAAAGGATGGAGAGGGCTGGTAGGTAACCCACCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS CAA 90 bp TTGTTTTCAACGAGGGTGGGTTACCTACCAGCCCTCTCCATCCTTTaGGAGCCAAATTTGACGCCGGACATCTCGGGTCCGCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LFSTRVGYLPALSIL*EPNLTPDISGPRSC
Trigger: GCAGGACCGCGGACCCGAGATGTCCGGCGTCAAATTTGGCTCCAAAAGGATGGAGAGGGCTGGTAGGTAACCCACCCTCGTTGAAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS CAA 90 bp CTCTCTTGCAAACGCTGGGACTGTCTCCTCTGGAGGGAGCTGGAATaGCAGATTGTGGGGCCTGTCCTGCCACCTTCTGTTCCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: LSCKRWDCLLWRELE*QIVGPVLPPSVPQE
Trigger: TTCTTGGGGAACAGAAGGTGGCAGGACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 90 bp CAATGGCCAAAACCTTGCAAGACTGGCTATACTTCTGACCCCACCTaGGTGGGTACCACTGCTCCATCAGGCCTGGTCCACACCAGAGCC +
Preference number: 6 (lower is better)
Translates to: QWPKPCKTGYTSDPT*VGTTAPSGLVHTRA
Trigger: GGCTCTGGTGTGGACCAGGCCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAGGTTTTGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp CACAGACCACCCACTTCAAGCCAAGGTCAGTCGGGAAAGCCACGATaGGGGAACTGGAACCCAGAGGGTCATCAGAAGTCTCTCCCACCT +
Preference number: 6 (lower is better)
Translates to: HRPPTSSQGQSGKPR*GNWNPEGHQKSLPP
Trigger: AGGTGGGAGAGACTTCTGATGACCCTCTGGGTTCCAGTTCCCCAATCGTGGCTTTCCCGACTGACCTTGGCTTGAAGTGGGTGGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS TCA 72 bp CTGCCACACTGGGTGGCCCTGGAACCCTTCCTGCCTTaGCATTCACTCAAGGTGCACGGTAATCACCCATTG +
Preference number: 6 (lower is better)
Translates to: LPHWVALEPFLP*HSLKVHGNHPL
Trigger: CAATGGGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGAAGGGTTCCAGGGCCACCCAGTGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp CCTGGACTGCTCAGAGGAGCCTGGCTTGATCCACAGTaGCCCTTTCCCCTCGTTCTTGGTTACCCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: PGLLRGAWLDPQ*PFPLVLGYPCD
Trigger: ATCACAGGGGTAACCAAGAACGAGGGGAAAGGGTCACTGTGGATCAAGCCAGGCTCCTCTGAGCAGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455640.5
CDS TCA 72 bp ATAGCAGCTGAACGGAGAGTCAGGAATCCAGAATTCTaGTCCCAGCTCTGCTCCTGCCACACTGGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: IAAERRVRNPEF*SQLCSCHTGWP
Trigger: GGGCCACCCAGTGTGGCAGGAGCAGAGCTGGGATCAGAATTCTGGATTCCTGACTCTCCGTTCAGCTGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp AGCATATCTTCAGAGCTTGCTGTCAGCACCCGGGAGTaGGGGCACGAGTCCAGAACTGGAGATGAGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SISSELAVSTRE*GHESRTGDELR
Trigger: TCTGAGCTCATCTCCAGTTCTGGACTCGTGCCCCCACTCCCGGGTGCTGACAGCAAGCTCTGAAGATATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CCA 72 bp AAGCTGCTCTCTTGCAAACGCTGGGACTGTCTCCTCTaGAGGGAGCTGGAATTGCAGATTGTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: KLLSCKRWDCLL*RELELQIVGPV
Trigger: GACAGGCCCCACAATCTGCAATTCCAGCTCCCTCCAGAGGAGACAGTCCCAGCGTTTGCAAGAGAGCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp CTTGCAAGACTGGCTATACTTCTGACCCCACCTTGGTaGGTACCACTGCTCCATCAGGCCTGGTCCACACCA +
Preference number: 6 (lower is better)
Translates to: LARLAILLTPPW*VPLLHQAWSTP
Trigger: TGGTGTGGACCAGGCCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp CAGAACCTCTTTGGATCCTCTCTGATCCCCAGAAACTaGTGTCCACCACTCTCGCTGCCCGGAACTCATCCC +
Preference number: 6 (lower is better)
Translates to: QNLFGSSLIPRN*CPPLSLPGTHP
Trigger: GGGATGAGTTCCGGGCAGCGAGAGTGGTGGACACCAGTTTCTGGGGATCAGAGAGGATCCAAAGAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp AGCCAAGGTCAGTCGGGAAAGCCACGATTGGGGAACTaGAACCCAGAGGGTCATCAGAAGTCTCTCCCACCT +
Preference number: 6 (lower is better)
Translates to: SQGQSGKPRLGN*NPEGHQKSLPP
Trigger: AGGTGGGAGAGACTTCTGATGACCCTCTGGGTTCCAGTTCCCCAATCGTGGCTTTCCCGACTGACCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS CAA 90 bp TCCCTCTCTGGGACCAGGATCAGCTCTTGCAAGCTTACTCCACACTaGTATCTGCCCCTTGCAGCCATGCATGACAAATGGGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SLSGTRISSCKLTPH*YLPLAAMHDKWAPS
Trigger: GGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAGAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp GACCTGGCCCAGTGGACTCTGATCTTACAGCCAATATaGGGCAGCAAAGTGGGACATCTGTCTACAGGGCCA +
Preference number: 6 (lower is better)
Translates to: DLAQWTLILQPI*GSKVGHLSTGP
Trigger: TGGCCCTGTAGACAGATGTCCCACTTTGCTGCCCCATATTGGCTGTAAGATCAGAGTCCACTGGGCCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp CCACTTCAAGCCAAGGTCAGTCGGGAAAGCCACGATTaGGGAACTGGAACCCAGAGGGTCATCAGAAGTCTC +
Preference number: 6 (lower is better)
Translates to: PLQAKVSRESHD*GTGTQRVIRSL
Trigger: GAGACTTCTGATGACCCTCTGGGTTCCAGTTCCCCAATCGTGGCTTTCCCGACTGACCTTGGCTTGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS CAA 72 bp GAACTAGTGCCACCTTTTACCTGCACCTGGAATCCCTaGCGTATGCTCCCTGCCCCTCTACTCCCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: ELVPPFTCTWNP*RMLPAPLLPKD
Trigger: GTCCTTTGGGAGTAGAGGGGCAGGGAGCATACGCAAGGGATTCCAGGTGCAGGTAAAAGGTGGCACTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp CCCACTTCAAGCCAAGGTCAGTCGGGAAAGCCACGATaGGGGAACTGGAACCCAGAGGGTCATCAGAAGTCT +
Preference number: 6 (lower is better)
Translates to: PTSSQGQSGKPR*GNWNPEGHQKS
Trigger: AGACTTCTGATGACCCTCTGGGTTCCAGTTCCCCAATCGTGGCTTTCCCGACTGACCTTGGCTTGAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS CAA 90 bp GGAGGAAGAATGTGGGGAAGTGACATGGATTCAAAGCCAAGTGTCTaGCCCCAGGCAGAAGGATCTGTGTGCAGAACACCCAGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: GGRMWGSDMDSKPSV*PQAEGSVCRTPREA
Trigger: GGCCTCTCTGGGTGTTCTGCACACAGATCCTTCTGCCTGGGGCAAGACACTTGGCTTTGAATCCATGTCACTTCCCCACATTCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp AGCTCAGGCCTCTGGATCACCCTTCACCCCCACTGCCAACTACAATaGGTTAGCTCTGAGTCCACAGTTGCCAGAGAAAAGGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: SSGLWITLHPHCQLQ*VSSESTVAREKGSQ
Trigger: CTGAGAGCCCTTTTCTCTGGCAACTGTGGACTCAGAGCTAACCAATTGTAGTTGGCAGTGGGGGTGAAGGGTGATCCAGAGGCCTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CCAATGGCCAAAACCTTGCAAGACTGGCTATACTTCTaGCCCCACCTTGGTGGGTACCACTGCTCCATCAGG +
Preference number: 6 (lower is better)
Translates to: PMAKTLQDWLYF*PHLGGYHCSIR
Trigger: CCTGATGGAGCAGTGGTACCCACCAAGGTGGGGTCAGAAGTATAGCCAGTCTTGCAAGGTTTTGGCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CCACATGAACCTTCCAGAACCTCTTTGGATCCTCTCTaGTCCCCAGAAACTGGTGTCCACCACTCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: PHEPSRTSLDPL*SPETGVHHSRC
Trigger: GCAGCGAGAGTGGTGGACACCAGTTTCTGGGGATCAGAGAGGATCCAAAGAGGTTCTGGAAGGTTCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp GTCCAAGACCAAGGTAGAAGCAGGGTCAACTTCTCCTaGGGCCTCTCTCCTCGATTCACAGATGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: VQDQGRSRVNFS*GLSPRFTDGSF
Trigger: GAAGCTGCCATCTGTGAATCGAGGAGAGAGGCCTCAGGAGAAGTTGACCCTGCTTCTACCTTGGTCTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643002.1
CDS GCA 72 bp TTTTACCTGCACCTGGAATCCCTTGCGTATGCTCCCTaGCCCTCTACTCCCAAAGGACGTTCCCTCAGTCTA +
Preference number: 6 (lower is better)
Translates to: FYLHLESLAYAP*PSTPKGRSLSL
Trigger: TAGACTGAGGGAACGTCCTTTGGGAGTAGAGGGGCAGGGAGCATACGCAAGGGATTCCAGGTGCAGGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp TGCAGCTCAGGCCTCTGGATCACCCTTCACCCCCACTaGCAACTACAATTGGTTAGCTCTGAGTCCACAGTT +
Preference number: 6 (lower is better)
Translates to: CSSGLWITLHPH*QLQLVSSESTV
Trigger: AACTGTGGACTCAGAGCTAACCAATTGTAGTTGGCAGTGGGGGTGAAGGGTGATCCAGAGGCCTGAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp TTGATCCTATCTACCTGTCTCTATTCCTGTGGCCTGTaGTCCTCTCTGCAGACACAGAGGCCGACTCCCACA +
Preference number: 6 (lower is better)
Translates to: LILSTCLYSCGL*SSLQTQRPTPT
Trigger: TGTGGGAGTCGGCCTCTGTGTCTGCAGAGAGGACCACAGGCCACAGGAATAGAGACAGGTAGATAGGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000660931.1
ENST00000668051.1
ENST00000669142.1
CDS CCA 72 bp TGTCACCTTGATCCTATCTACCTGTCTCTATTCCTGTaGCCTGTGGTCCTCTCTGCAGACACAGAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: CHLDPIYLSLFL*PVVLSADTEAD
Trigger: GTCGGCCTCTGTGTCTGCAGAGAGGACCACAGGCCACAGGAATAGAGACAGGTAGATAGGATCAAGGTGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000660931.1
ENST00000668051.1
ENST00000669142.1
CDS CCA 72 bp GAACCACATGGGTGGACAGATGCCTCCAACACCTCGTaGGACTGTTGTGATAACGCTTGCAAAGCACCAAGC +
Preference number: 6 (lower is better)
Translates to: EPHGWTDASNTS*DCCDNACKAPS
Trigger: GCTTGGTGCTTTGCAAGCGTTATCACAACAGTCCCACGAGGTGTTGGAGGCATCTGTCCACCCATGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449717.1
CDS CCA 72 bp CTAGAAAACCACCGGAGTCTGACCGCTAAGTCACTGTaGCCAGAATCCAAGGTCACCCGAGGTCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: LENHRSLTAKSL*PESKVTRGPKR
Trigger: TCTCTTTGGACCTCGGGTGACCTTGGATTCTGGCCACAGTGACTTAGCGGTCAGACTCCGGTGGTTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 72 bp GCTCTTGCAAGCTTACTCCACACTTGTATCTGCCCCTaGCAGCCATGCATGACAAATGGGCTCCCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: ALASLLHTCICP*QPCMTNGLPPQ
Trigger: TTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CACCCGGGAGTGGGGGCACGAGTCCAGAACTGGAGATaGGCTCAGACACTTACACTGAGAAAAATGCATCTA +
Preference number: 6 (lower is better)
Translates to: HPGVGARVQNWR*AQTLTLRKMHL
Trigger: TAGATGCATTTTTCTCAGTGTAAGTGTCTGAGCTCATCTCCAGTTCTGGACTCGTGCCCCCACTCCCGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000413665.5
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS TCA 72 bp ATGCTCTCTGTCCCTCTCCACAGAGAAAAGGCCATGTaGGGACATAGTGAGAAGGTGCCACCTGCAAGCCAA +
Preference number: 6 (lower is better)
Translates to: MLSVPLHREKAM*GHSEKVPPASQ
Trigger: TTGGCTTGCAGGTGGCACCTTCTCACTATGTCCTCACATGGCCTTTTCTCTGTGGAGAGGGACAGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp CCTGATCTTCTCCAGGGACTTCCCACCACCATGGGATaGCATGTTTTCAAGATTGCTCCCCTTCCGAGCCTT +
Preference number: 6 (lower is better)
Translates to: PDLLQGLPTTMG*HVFKIAPLPSL
Trigger: AAGGCTCGGAAGGGGAGCAATCTTGAAAACATGTCATCCCATGGTGGTGGGAAGTCCCTGGAGAAGATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp TGTGGGGAAGTGACATGGATTCAAAGCCAAGTGTCTTaGCCCAGGCAGAAGGATCTGTGTGCAGAACACCCA +
Preference number: 6 (lower is better)
Translates to: CGEVTWIQSQVS*PRQKDLCAEHP
Trigger: TGGGTGTTCTGCACACAGATCCTTCTGCCTGGGGCAAGACACTTGGCTTTGAATCCATGTCACTTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp CTTCCTCCTCTGAGTCTTGTTAATAGGGCCATCCCCTaGCTTAGACCTGGCCCAGTGGACTCTGATCTTACA +
Preference number: 6 (lower is better)
Translates to: LPPLSLVNRAIP*LRPGPVDSDLT
Trigger: TGTAAGATCAGAGTCCACTGGGCCAGGTCTAAGGCAGGGGATGGCCCTATTAACAAGACTCAGAGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp GGATCAGCTCTTGCAAGCTTACTCCACACTTGTATCTaGCCCTTGCAGCCATGCATGACAAATGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: GSALASLLHTCI*PLQPCMTNGLP
Trigger: AGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp ATGTCTCAAGTGCCCACCTTGAAAGGGCTGCAGAAATaGAGTCCCCTTTCAGGGACTTACCTGGCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: MSQVPTLKGLQK*SPLSGTYLACL
Trigger: CAGACAAGCCAGGTAAGTCCCTGAAAGGGGACTGCATTTCTGCAGCCCTTTCAAGGTGGGCACTTGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS CCA 72 bp TGTCTGGAACCACATGGGTGGACAGATGCCTCCAACTaGCTTGTCTGGGTTGATGATGCCGTCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: CLEPHGWTDASN*LVWVDDAVFIS
Trigger: AGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGTTGGAGGCATCTGTCCACCCATGTGGTTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000660931.1
ENST00000669142.1
CDS CCA 72 bp AAACCCCAGCCACTCTTCACCTATATTTCCCCCAAATaGCTAGCACGGGAAAGGGCCCAAAGTAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: KPQPLFTYISPK*LARERAQSRCS
Trigger: TGAGCACCTACTTTGGGCCCTTTCCCGTGCTAGCCATTTGGGGGAAATATAGGTGAAGAGTGGCTGGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS CCA 72 bp CAATGCTGCGGTTCTGGAGGGCTTCTCAGAAAGCACTaGCTTGTCTGGGTTGATGATGCCGTCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: QCCGSGGLLRKH*LVWVDDAVFIS
Trigger: AGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGTGCTTTCTGAGAAGCCCTCCAGAACCGCAGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643002.1
ENST00000643270.1
CDS CAA 72 bp TGGAACCACATGGGTGGACAGATGCCTCCAACTGGCTaGTCTGGGTTGATGATGCCGTCTTCATCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: WNHMGGQMPPTG*SGLMMPSSSLA
Trigger: AGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGTTGGAGGCATCTGTCCACCCATGTGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000660931.1
ENST00000669142.1
CDS CAA 72 bp ATGTGGGGAAGTGACATGGATTCAAAGCCAAGTGTCTaGCCCCAGGCAGAAGGATCTGTGTGCAGAACACCC +
Preference number: 6 (lower is better)
Translates to: MWGSDMDSKPSV*PQAEGSVCRTP
Trigger: GGGTGTTCTGCACACAGATCCTTCTGCCTGGGGCAAGACACTTGGCTTTGAATCCATGTCACTTCCCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GGGACCAGGATCAGCTCTTGCAAGCTTACTCCACACTaGTATCTGCCCCTTGCAGCCATGCATGACAAATGG +
Preference number: 6 (lower is better)
Translates to: GTRISSCKLTPH*YLPLAAMHDKW
Trigger: CCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp CTGAAGAACCTGGAAATTCCCTTCTGTCTCCTCTGTCCCAGGAACTaGCTGCTCTCTGTAAATAGACCCTGGACTGCTCAGAGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: LKNLEIPFCLLCPRN*LLSVNRPWTAQRSL
Trigger: CAGGCTCCTCTGAGCAGTCCAGGGTCTATTTACAGAGAGCAGCAAGTTCCTGGGACAGAGGAGACAGAAGGGAATTTCCAGGTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418918.5
ENST00000439738.5
ENST00000449717.1
ENST00000451141.1
ENST00000452429.5
ENST00000453023.1
ENST00000455640.5
ENST00000613780.4
ENST00000616469.4
ENST00000665574.1
CDS CAA 90 bp CACACCACTCCGCATTCTGGGAAAAAGGACATCTGGCTTTTAAACTaGCCTAAGGGAGGCCACAAGCTGCTCTCTTGCAAACGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: HTTPHSGKKDIWLLN*PKGGHKLLSCKRWD
Trigger: GTCCCAGCGTTTGCAAGAGAGCAGCTTGTGGCCTCCCTTAGGCAAGTTTAAAAGCCAGATGTCCTTTTTCCCAGAATGCGGAGTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 90 bp ACCCACCAAGGCATATTTTTCCCTCTCTGGGACCAGGATCAGCTCTaGCAAGCTTACTCCACACTTGTATCTGCCCCTTGCAGCCATGCA +
Preference number: 6 (lower is better)
Translates to: THQGIFFPLWDQDQL*QAYSTLVSAPCSHA
Trigger: TGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAGAGAGGGAAAAATATGCCTTGGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp TCCTGCCTTGACATTCACTCAAGGTGCACGGTAATCACCCATTGTTaGAAGCAATGGATGGGAAATGGAAGGGACCCTTCTGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SCLDIHSRCTVITHC*KQWMGNGRDPSAQP
Trigger: AGGCTGGGCAGAAGGGTCCCTTCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 90 bp CTAACCACATGGACCCTGCCCAAAAGCATGTTGCTTCCCTATTTATaGGCTGTGGGTCTCAGAGCACCCCCTGCAAATATTTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LTTWTLPKSMLLPYL*AVGLRAPPANISAP
Trigger: GGGAGCTGAAATATTTGCAGGGGGTGCTCTGAGACCCACAGCCAATAAATAGGGAAGCAACATGCTTTTGGGCAGGGTCCATGTGGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp CCAGGATCAGCTCTTGCAAGCTTACTCCACACTTGTATCTGCCCCTaGCAGCCATGCATGACAAATGGGCTCCCTCCCCAATGGAATTAT +
Preference number: 6 (lower is better)
Translates to: PGSALASLLHTCICP*QPCMTNGLPPQWNY
Trigger: ATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp GGTAACAACTGTGCTGTCTTCATCAACTGGCAGACCTaGGTCAGGAGAGTCAGGGAGCTCTCTCAGCATATC +
Preference number: 6 (lower is better)
Translates to: GNNCAVFINWQT*VRRVRELSQHI
Trigger: GATATGCTGAGAGAGCTCCCTGACTCTCCTGACTCAGGTCTGCCAGTTGATGAAGACAGCACAGTTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000421867.6
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS TCA 72 bp ACCAAGGAAGTCCCCCACAAAATGACAATTACGCACTaGGCAAATGGAGACAAAGGACTCCAGCCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: TKEVPHKMTITH*ANGDKGLQPAA
Trigger: TGCCGCTGGCTGGAGTCCTTTGTCTCCATTTGCTCAGTGCGTAATTGTCATTTTGTGGGGGACTTCCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp CTGATTGGAGAAGAGTGTCCTGAGACTGGGCTAAGGTaGCCCCTTAAGCCTTTGGGTAAGACTGGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LIGEECPETGLR*PLKPLGKTGSL
Trigger: AAGGGAACCAGTCTTACCCAAAGGCTTAAGGGGTCACCTTAGCCCAGTCTCAGGACACTCTTCTCCAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp GTCTCAGAGCACCCCCTGCAAATATTTCAGCTCCCCTaGAAATGGACCCTACTTGTCCTAGACAGAAACCCC +
Preference number: 6 (lower is better)
Translates to: VSEHPLQIFQLP*KWTLLVLDRNP
Trigger: GGGGTTTCTGTCTAGGACAAGTAGGGTCCATTTTCAGGGGAGCTGAAATATTTGCAGGGGGTGCTCTGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp AGTCTTATTTGCATTCTCTGTCCTGGAACGTGGGTCTaGACAAAGATCCCAGCCCATAGGCAGAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SLICILCPGTWV*TKIPAHRQSLL
Trigger: CAGAAGGCTCTGCCTATGGGCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp TCAAGGTGCACGGTAATCACCCATTGTTTGAAGCAATaGATGGGAAATGGAAGGGACCCTTCTGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SRCTVITHCLKQ*MGNGRDPSAQP
Trigger: AGGCTGGGCAGAAGGGTCCCTTCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp TTGGTGAGTCTTATTTGCATTCTCTGTCCTGGAACGTaGGTCTGCACAAAGATCCCAGCCCATAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LVSLICILCPGT*VCTKIPAHRQS
Trigger: GCTCTGCCTATGGGCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp GGGTTAGTAAGAAGAGAAAACAGGGTTAGTAGGGGCTaGGTTAGTAAGTCAGAGCACAGCACCAGCGGACAG +
Preference number: 6 (lower is better)
Translates to: GLVRRENRVSRG*VSKSEHSTSGQ
Trigger: CTGTCCGCTGGTGCTGTGCTCTGACTTACTAACCCAGCCCCTACTAACCCTGTTTTCTCTTCTTACTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp CTGAATGAGGGAGGGGTCGAAGAGAATGTGCCTGCTTaGGCTCAGCCTCCTCTAATATTGTCAAGATGCACA +
Preference number: 6 (lower is better)
Translates to: LNEGGVEENVPA*AQPPLILSRCT
Trigger: TGTGCATCTTGACAATATTAGAGGAGGCTGAGCCCAAGCAGGCACATTCTCTTCGACCCCTCCCTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp GGTTCTGGAGGGCTTCTCAGAAAGCACTGGCTTGTCTaGGTTGATGATGCCGTCTTCATCTCTTGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: GSGGLLRKHWLV*VDDAVFISCSE
Trigger: TTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGTGCTTTCTGAGAAGCCCTCCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643002.1
ENST00000643270.1
CDS CCA 72 bp TGGGAAGAAGCATGGATCACAGCCAGAGAAAGGACCTaGCTTGTCTGGGTTGATGATGCCGTCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: WEEAWITARERT*LVWVDDAVFIS
Trigger: AGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTCCTTTCTCTGGCTGTGATCCATGCTTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668051.1
CDS CAA 72 bp GGAGAGAGGCCTCACCAGAAACCAAGTCTTAACACCTaGATCTGGACTTTCCAGCCTCCAGAACTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: GERPHQKPSLNT*IWTFQPPELAE
Trigger: TTCTGCCAGTTCTGGAGGCTGGAAAGTCCAGATCAAGGTGTTAAGACTTGGTTTCTGGTGAGGCCTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 72 bp GGCATATTTTTCCCTCTCTGGGACCAGGATCAGCTCTaGCAAGCTTACTCCACACTTGTATCTGCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: GIFFPLWDQDQL*QAYSTLVSAPC
Trigger: GCAAGGGGCAGATACAAGTGTGGAGTAAGCTTGCAAGAGCTGATCCTGGTCCCAGAGAGGGAAAAATATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp CTGGAGGGCTTCTCAGAAAGCACTGGCTTGTCTGGGTaGATGATGCCGTCTTCATCTCTTGCTCTGAACATC +
Preference number: 6 (lower is better)
Translates to: LEGFSESTGLSG*MMPSSSLALNI
Trigger: GATGTTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGTGCTTTCTGAGAAGCCCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643002.1
ENST00000643270.1
CDS CAA 72 bp CAGTCCCCTTTCAGGGACTTACCTGGCTTGTCTGGGTaGATGATGCCGTCTTCATCTCTTGCTCTGAACATC +
Preference number: 6 (lower is better)
Translates to: QSPFRDLPGLSG*MMPSSSLALNI
Trigger: GATGTTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTAAGTCCCTGAAAGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS CAA 90 bp GGGGTCGAAGAGAATGTGCCTGCTTGGGCTCAGCCTCCTCTAATATaGTCAAGATGCACACACACTCTTAGAATCTCACAACCATCGCCA +
Preference number: 6 (lower is better)
Translates to: GVEENVPAWAQPPLI*SRCTHTLRISQPSP
Trigger: TGGCGATGGTTGTGAGATTCTAAGAGTGTGTGTGCATCTTGACAATATTAGAGGAGGCTGAGCCCAAGCAGGCACATTCTCTTCGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp GCAGAAATGCAGTCCCCTTTCAGGGACTTACCTGGCTTGTCTGGGTaGATGATGCCGTCTTCATCTCTTGCTCTGAACATCTGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: AEMQSPFRDLPGLSG*MMPSSSLALNICSC
Trigger: ACAGGAACAGATGTTCAGAGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTAAGTCCCTGAAAGGGGACTGCATTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS TCA 72 bp GAGAGAGGCCTCACCAGAAACCAAGTCTTAACACCTTaGTCTGGACTTTCCAGCCTCCAGAACTGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ERGLTRNQVLTP*SGLSSLQNWQK
Trigger: TTTCTGCCAGTTCTGGAGGCTGGAAAGTCCAGATCAAGGTGTTAAGACTTGGTTTCTGGTGAGGCCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp GCTAGGCACACAATCTCACTGAATTCTCCCTGCACCTaGCAGGCAAGCACATTCCTTCCATTTCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: ARHTISLNSPCT*QASTFLPFHRA
Trigger: TGCTCTGTGAAATGGAAGGAATGTGCTTGCCTGTCAGGTGCAGGGAGAATTCAGTGAGATTGTGTGCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS TCA 72 bp GCAGACTCTGACTACCAGACTGAGTCAGCAAAACCTTaGACTAGTGCCACCTTTTACCTGCACCTGGAATCC +
Preference number: 6 (lower is better)
Translates to: ADSDYQTESAKP*TSATFYLHLES
Trigger: GGATTCCAGGTGCAGGTAAAAGGTGGCACTAGTTCAAGGTTTTGCTGACTCAGTCTGGTAGTCAGAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp CCCTGGAACCCTTCCTGCCTTGACATTCACTCAAGGTaGACGGTAATCACCCATTGTTTGAAGCAATGGATG +
Preference number: 6 (lower is better)
Translates to: PWNPSCLDIHSR*TVITHCLKQWM
Trigger: CATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTCAAGGCAGGAAGGGTTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS GCA 72 bp AGAGTAGGTGCACATCAATCTTGTCTGTCTCCTTGGTaGTCCCACAGACCCCTGACCAATCATAACACCCAT +
Preference number: 6 (lower is better)
Translates to: RVGAHQSCLSPW*SHRPLTNHNTH
Trigger: ATGGGTGTTATGATTGGTCAGGGGTCTGTGGGAGCACCAAGGAGACAGACAAGATTGATGTGCACCTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp AGCTTACTCCACACTTGTATCTGCCCCTTGCAGCCATaGATGACAAATGGGCTCCCTCCCCAATGGAATTAT +
Preference number: 6 (lower is better)
Translates to: SLLHTCICPLQP*MTNGLPPQWNY
Trigger: ATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp ATAGATGGAACAGAGACCCAGAGAAGAAAGGTGGCTTaGCTGAGGTCTCCGTTTCAATACAGCCATGCTGAC +
Preference number: 6 (lower is better)
Translates to: IDGTETQRRKVA*LRSPFQYSHAD
Trigger: GTCAGCATGGCTGTATTGAAACGGAGACCTCAGGCAAGCCACCTTTCTTCTCTGGGTCTCTGTTCCATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS CAA 72 bp AAGAAGCATGGATCACAGCCAGAGAAAGGACCTGGCTaGTCTGGGTTGATGATGCCGTCTTCATCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: KKHGSQPEKGPG*SGLMMPSSSLA
Trigger: AGCAAGAGATGAAGACGGCATCATCAACCCAGACAAGCCAGGTCCTTTCTCTGGCTGTGATCCATGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668051.1
CDS CAA 90 bp ACTCAAACTCACTCAACAGGAAGTGGCAGAGTTGGTGAGTCTTATTaGCATTCTCTGTCCTGGAACGTGGGTCTGCACAAAGATCCCAGC +
Preference number: 6 (lower is better)
Translates to: TQTHSTGSGRVGESY*HSLSWNVGLHKDPS
Trigger: GCTGGGATCTTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CCATGTGAGCTGGTTTTATCCCATCCAGCATGGCTGTaGAATCCTAAAGGTTCAAACCCCAGCCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: PCELVLSHPAWL*NPKGSNPSHSS
Trigger: TGAAGAGTGGCTGGGGTTTGAACCTTTAGGATTTCACAGCCATGCTGGATGGGATAAAACCAGCTCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000665574.1
CDS TCA 72 bp TACTCCACACTTGTATCTGCCCCTTGCAGCCATGCATaGCAAATGGGCTCCCTCCCCAATGGAATTATCTTA +
Preference number: 6 (lower is better)
Translates to: YSTLVSAPCSHA*QMGSLPNGIIL
Trigger: TAAGATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTGTGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CCCCTTGCCGAGACTGTAATAAAGCGTGTTCTGACATaGAGATCTGAGCAGATGGGATCATGTCTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: PLAETVIKRVLT*RSEQMGSCLWV
Trigger: AACCCAGAGACATGATCCCATCTGCTCAGATCTTCATGTCAGAACACGCTTTATTACAGTCTCGGCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 72 bp GGATTTCGTGATGGATCTGATCTCAAAGCATTAAGCTaGTCTCTACCATCCCCAGTGGACACAGGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: GFRDGSDLKALS*SLPSPVDTGRE
Trigger: CTCTCTTCCTGTGTCCACTGGGGATGGTAGAGACCAGCTTAATGCTTTGAGATCAGATCCATCACGAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413665.5
ENST00000425476.5
ENST00000453023.1
ENST00000660931.1
ENST00000669142.1
ENST00000670887.1
CDS CCA 72 bp CCTGCACAGACCAGAAGAGGGCAGGCTGGTAGGCTATaGGCTGGTAAGTTTAAATACTTATCTGCAAAGATG +
Preference number: 6 (lower is better)
Translates to: PAQTRRGQAGRL*AGKFKYLSAKM
Trigger: CATCTTTGCAGATAAGTATTTAAACTTACCAGCCCATAGCCTACCAGCCTGCCCTCTTCTGGTCTGTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000413665.5
ENST00000419237.1
ENST00000421867.6
ENST00000422403.5
ENST00000425476.5
ENST00000430483.5
ENST00000436238.6
ENST00000439738.5
ENST00000440347.5
ENST00000450203.5
ENST00000451141.1
ENST00000452429.5
ENST00000453023.1
ENST00000455640.5
ENST00000458302.5
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
ENST00000668051.1
CDS CAA 72 bp CCGCATTCTGGGAAAAAGGACATCTGGCTTTTAAACTaGCCTAAGGGAGGCCACAAGCTGCTCTCTTGCAAA +
Preference number: 6 (lower is better)
Translates to: PHSGKKDIWLLN*PKGGHKLLSCK
Trigger: TTTGCAAGAGAGCAGCTTGTGGCCTCCCTTAGGCAAGTTTAAAAGCCAGATGTCCTTTTTCCCAGAATGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 72 bp CACTCAACAGGAAGTGGCAGAGTTGGTGAGTCTTATTaGCATTCTCTGTCCTGGAACGTGGGTCTGCACAAA +
Preference number: 6 (lower is better)
Translates to: HSTGSGRVGESY*HSLSWNVGLHK
Trigger: TTTGTGCAGACCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp AGTTGTTTATTTAGGAGGTATTGGTACCAGGAAGCCTaGGTAAGGGAGCAGGTTAGGGAGACAGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SCLFRRYWYQEA*VREQVRETGKR
Trigger: CCTCTTCCCTGTCTCCCTAACCTGCTCCCTTACCAAGGCTTCCTGGTACCAATACCTCCTAAATAAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643002.1
CDS CAA 90 bp GCAAGCCAAGGAGAGAGGCCTCACCAGAAACCAAGTCTTAACACCTaGATCTGGACTTTCCAGCCTCCAGAACTGGCAGAAAATAAATTC +
Preference number: 6 (lower is better)
Translates to: ASQGERPHQKPSLNT*IWTFQPPELAENKF
Trigger: GAATTTATTTTCTGCCAGTTCTGGAGGCTGGAAAGTCCAGATCAAGGTGTTAAGACTTGGTTTCTGGTGAGGCCTCTCTCCTTGGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 90 bp TGCATGACAAATGGGCTCCCTCCCCAATGGAATTATCTTATAGACTaGCAGCCTATGACTGTGTTTCCCCTGATCTTCTCCAGGGACTTC +
Preference number: 6 (lower is better)
Translates to: CMTNGLPPQWNYLID*QPMTVFPLIFSRDF
Trigger: GAAGTCCCTGGAGAAGATCAGGGGAAACACAGTCATAGGCTGCAAGTCTATAAGATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp CCCCCAGCTCAACATGTCACCATTTACACCAGCACAGCCCTCACATaGGGTCCACAGCACAACCTATTAAGAAAGGATTATAACACCTGT +
Preference number: 6 (lower is better)
Translates to: PPAQHVTIYTSTALT*GPQHNLLRKDYNTC
Trigger: ACAGGTGTTATAATCCTTTCTTAATAGGTTGTGCTGTGGACCCAATGTGAGGGCTGTGCTGGTGTAAATGGTGACATGTTGAGCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp CCGACTTCTGATTGTTCTGACTCAGAGCAGCCACCACGCCCAAAATaGTTAGCTATGCTTTTCCCTGTGTTAGTCAAGTTCAAACCTGTG +
Preference number: 6 (lower is better)
Translates to: PTSDCSDSEQPPRPK*LAMLFPVLVKFKPV
Trigger: CACAGGTTTGAACTTGACTAACACAGGGAAAAGCATAGCTAACAATTTTGGGCGTGGTGGCTGCTCTGAGTCAGAACAATCAGAAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp TCAGTCTTTCCTTTAAAAGCCAATCAAATGTCTCAAGTGCCCACCTaGAAAGGGCTGCAGAAATGCAGTCCCCTTTCAGGGACTTACCTG +
Preference number: 6 (lower is better)
Translates to: SVFPLKANQMSQVPT*KGLQKCSPLSGTYL
Trigger: CAGGTAAGTCCCTGAAAGGGGACTGCATTTCTGCAGCCCTTTCAAGGTGGGCACTTGAGACATTTGATTGGCTTTTAAAGGAAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656640.1
CDS TCA 72 bp GAGAAAGTAGGACAAACTCAGCAGCTTGGTGATAGCTaGATAGCAGCTGAACGGAGAGTCAGGAATCCAGAA +
Preference number: 6 (lower is better)
Translates to: EKVGQTQQLGDS*IAAERRVRNPE
Trigger: TTCTGGATTCCTGACTCTCCGTTCAGCTGCTATTCAGCTATCACCAAGCTGCTGAGTTTGTCCTACTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS TCA 72 bp TACTCAAACTCACTCAACAGGAAGTGGCAGAGTTGGTaGGTCTTATTTGCATTCTCTGTCCTGGAACGTGGG +
Preference number: 6 (lower is better)
Translates to: YSNSLNRKWQSW*VLFAFSVLERG
Trigger: CCCACGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CTACCACTGAGGAAACTGAGGTTGAGAGAAGTGAGGTaGCTTACTCAAACTCACTCAACAGGAAGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LPLRKLRLREVR*LTQTHSTGSGR
Trigger: TCTGCCACTTCCTGTTGAGTGAGTTTGAGTAAGTCACCTCACTTCTCTCAACCTCAGTTTCCTCAGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp AATCTTGTCTGTCTCCTTGGTGCTCCCACAGACCCCTaGCCAATCATAACACCCATCTCACTGAATCACTAT +
Preference number: 6 (lower is better)
Translates to: NLVCLLGAPTDP*PIITPISLNHY
Trigger: ATAGTGATTCAGTGAGATGGGTGTTATGATTGGTCAGGGGTCTGTGGGAGCACCAAGGAGACAGACAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp CGAGACTGTAATAAAGCGTGTTCTGACATGAAGATCTaGGCAGATGGGATCATGTCTCTGGGTTCACCTCTG +
Preference number: 6 (lower is better)
Translates to: RDCNKACSDMKI*ADGIMSLGSPL
Trigger: CAGAGGTGAACCCAGAGACATGATCCCATCTGCTCAGATCTTCATGTCAGAACACGCTTTATTACAGTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613780.4
ENST00000620145.4
ENST00000643270.1
CDS CCA 72 bp CACTTGTATCTGCCCCTTGCAGCCATGCATGACAAATaGGCTCCCTCCCCAATGGAATTATCTTATAGACTT +
Preference number: 6 (lower is better)
Translates to: HLYLPLAAMHDK*APSPMELSYRL
Trigger: AAGTCTATAAGATAATTCCATTGGGGAGGGAGCCCATTTGTCATGCATGGCTGCAAGGGGCAGATACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GACATTCACTCAAGGTGCACGGTAATCACCCATTGTTaGAAGCAATGGATGGGAAATGGAAGGGACCCTTCT +
Preference number: 6 (lower is better)
Translates to: DIHSRCTVITHC*KQWMGNGRDPS
Trigger: AGAAGGGTCCCTTCCATTTCCCATCCATTGCTTCAAACAATGGGTGATTACCGTGCACCTTGAGTGAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000436238.6
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CAA 72 bp AATGGGCTCCCTCCCCAATGGAATTATCTTATAGACTaGCAGCCTATGACTGTGTTTCCCCTGATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: NGLPPQWNYLID*QPMTVFPLIFS
Trigger: GGAGAAGATCAGGGGAAACACAGTCATAGGCTGCAAGTCTATAAGATAATTCCATTGGGGAGGGAGCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp TCAAATGCAAGTTGTTTATTTAGGAGGTATTGGTACCAGGAAGCCTaGGTAAGGGAGCAGGTTAGGGAGACAGGGAAGAGGAGAAATCTG +
Preference number: 6 (lower is better)
Translates to: SNASCLFRRYWYQEA*VREQVRETGKRRNL
Trigger: CAGATTTCTCCTCTTCCCTGTCTCCCTAACCTGCTCCCTTACCAAGGCTTCCTGGTACCAATACCTCCTAAATAAACAACTTGCATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643002.1
CDS TCA 72 bp TTCATCTCTTGCTCTGAACATCTGTTCCTGTCACCTTaGTCCTATCTACCTGTCTCTATTCCTGTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: FISCSEHLFLSP*SYLPVSIPVAC
Trigger: ACAGGCCACAGGAATAGAGACAGGTAGATAGGATCAAGGTGACAGGAACAGATGTTCAGAGCAAGAGATGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418918.5
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000660931.1
ENST00000668051.1
ENST00000669142.1
CDS TCA 72 bp CTTCCACATATGTTTGCCAGAAGAATGACTAAATCTTaGAGCTTCCAATGCTGCGGTTCTGGAGGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LPHMFARRMTKS*SFQCCGSGGLL
Trigger: GAGAAGCCCTCCAGAACCGCAGCATTGGAAGCTTCAAGATTTAGTCATTCTTCTGGCAAACATATGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
CDS CCA 72 bp AGGCCTCACCAGAAACCAAGTCTTAACACCTTGATCTaGACTTTCCAGCCTCCAGAACTGGCAGAAAATAAA +
Preference number: 6 (lower is better)
Translates to: RPHQKPSLNTLI*TFQPPELAENK
Trigger: TTTATTTTCTGCCAGTTCTGGAGGCTGGAAAGTCCAGATCAAGGTGTTAAGACTTGGTTTCTGGTGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
ENST00000643270.1
ENST00000665574.1
CDS CCA 72 bp CCCAACACACTAGAATTAAAGCTCCTGAAGACCAAATaGTGTTTAACTACCACTACATCCCCAATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PNTLELKLLKTK*CLTTTTSPMPG
Trigger: GCCAGGCATTGGGGATGTAGTGGTAGTTAAACACCATTTGGTCTTCAGGAGCTTTAATTCTAGTGTGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GACTTACTCAAACTCACTCAACAGGAAGTGGCAGAGTaGGTGAGTCTTATTTGCATTCTCTGTCCTGGAACG +
Preference number: 6 (lower is better)
Translates to: DLLKLTQQEVAE*VSLICILCPGT
Trigger: CGTTCCAGGACAGAGAATGCAAATAAGACTCACCAACTCTGCCACTTCCTGTTGAGTGAGTTTGAGTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GATTGTTCTGACTCAGAGCAGCCACCACGCCCAAAATaGTTAGCTATGCTTTTCCCTGTGTTAGTCAAGTTC +
Preference number: 6 (lower is better)
Translates to: DCSDSEQPPRPK*LAMLFPVLVKF
Trigger: GAACTTGACTAACACAGGGAAAAGCATAGCTAACAATTTTGGGCGTGGTGGCTGCTCTGAGTCAGAACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp GAGAATGTGCCTGCTTGGGCTCAGCCTCCTCTAATATaGTCAAGATGCACACACACTCTTAGAATCTCACAA +
Preference number: 6 (lower is better)
Translates to: ENVPAWAQPPLI*SRCTHTLRISQ
Trigger: TTGTGAGATTCTAAGAGTGTGTGTGCATCTTGACAATATTAGAGGAGGCTGAGCCCAAGCAGGCACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 90 bp AAGATGGACCAAAGGGTCTTCCTAGTTTCAAAAAGTTCTGCTCAGTaGTCTAAAATGTGGCCAGAGGCCATTGCAAACTCCTCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: KMDQRVFLVSKSSAQ*SKMWPEAIANSSEF
Trigger: GAACTCAGAGGAGTTTGCAATGGCCTCTGGCCACATTTTAGACAACTGAGCAGAACTTTTTGAAACTAGGAAGACCCTTTGGTCCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp CAAAGGGTCTTCCTAGTTTCAAAAAGTTCTGCTCAGTaGTCTAAAATGTGGCCAGAGGCCATTGCAAACTCC +
Preference number: 6 (lower is better)
Translates to: QRVFLVSKSSAQ*SKMWPEAIANS
Trigger: GGAGTTTGCAATGGCCTCTGGCCACATTTTAGACAACTGAGCAGAACTTTTTGAAACTAGGAAGACCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp TCAAGATTGCTCCCCTTCCGAGCCTTTATTTTCACCTaGGTCCTCTTTACTTTCCAGTCATTGCAGAGATAC +
Preference number: 6 (lower is better)
Translates to: SRLLPFRAFIFT*VLFTFQSLQRY
Trigger: GTATCTCTGCAATGACTGGAAAGTAAAGAGGACCAAGGTGAAAATAAAGGCTCGGAAGGGGAGCAATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CAA 72 bp CAACATGTCACCATTTACACCAGCACAGCCCTCACATaGGGTCCACAGCACAACCTATTAAGAAAGGATTAT +
Preference number: 6 (lower is better)
Translates to: QHVTIYTSTALT*GPQHNLLRKDY
Trigger: ATAATCCTTTCTTAATAGGTTGTGCTGTGGACCCAATGTGAGGGCTGTGCTGGTGTAAATGGTGACATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp TCCAGAAAAACTCCCGTTTCCTCGGTGCAGCTAAATTaGACAGAAGAGTTTATGCTAGAAGAGCTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: SRKTPVSSVQLN*TEEFMLEELKV
Trigger: AACTTTTAGCTCTTCTAGCATAAACTCTTCTGTGCAATTTAGCTGCACCGAGGAAACGGGAGTTTTTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS GCA 72 bp TTATTTTCACCTTGGTCCTCTTTACTTTCCAGTCATTaGAGAGATACTTCCAACTGGGGTAGACATGTATGG +
Preference number: 6 (lower is better)
Translates to: LFSPWSSLLSSH*RDTSNWGRHVW
Trigger: CCATACATGTCTACCCCAGTTGGAAGTATCTCTGCAATGACTGGAAAGTAAAGAGGACCAAGGTGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS TCA 72 bp GAAACTGAAGATAAACAGACACAACTAGAAGGGATCTaGGCCAAATTTCAGTCTCAACAATCTGCATCCAGA +
Preference number: 6 (lower is better)
Translates to: ETEDKQTQLEGI*AKFQSQQSASR
Trigger: TCTGGATGCAGATTGTTGAGACTGAAATTTGGCTCAGATCCCTTCTAGTTGTGTCTGTTTATCTTCAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000421867.6
ENST00000643002.1
ENST00000643270.1
ENST00000656640.1
ENST00000668051.1
ENST00000669142.1
CDS TCA 72 bp AAAAGTCAAGGAACACTTCATCCTATGCCCTGTCCCTaGGTATTTGAAATTGCCATTAGCATTTTAAAGGTT +
Preference number: 6 (lower is better)
Translates to: KSQGTLHPMPCP*VFEIAISILKV
Trigger: AACCTTTAAAATGCTAATGGCAATTTCAAATACTCAGGGACAGGGCATAGGATGAAGTGTTCCTTGACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4
CDS CCA 72 bp TCTTTACTTTCCAGTCATTGCAGAGATACTTCCAACTaGGGTAGACATGTATGGATTCTGTTTATCAAAAGA +
Preference number: 6 (lower is better)
Translates to: SLLSSHCRDTSN*GRHVWILFIKR
Trigger: TCTTTTGATAAACAGAATCCATACATGTCTACCCCAGTTGGAAGTATCTCTGCAATGACTGGAAAGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613780.4
ENST00000616213.4
ENST00000616469.4
ENST00000620145.4