RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGRN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102858

Ensembl transcript IDs: ENST00000262370.12, ENST00000399577.9, ENST00000415496.5, ENST00000536343.5, ENST00000585676.1, ENST00000586183.5, ENST00000587145.5, ENST00000587747.5, ENST00000588015.5, ENST00000588111.1, ENST00000588994.5, ENST00000590457.5, ENST00000590790.5, ENST00000591673.1, ENST00000591895.5, ENST00000592256.5, ENST00000593224.1, ENST00000615397.1

Found 1059 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCAGAGTaGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGCCACCAAG +
Preference number: 1 (lower is better)
Translates to: GSRGLHAASSARLSE*GQLGGAGIGAGATK
Trigger: CTTGGTGGCCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR CCA 90 bp TGCACGACGCCGCCGGGCGCTGTCCCCAGATGGGTCTGGCGTCCCTaGGGCTTGGGCAATGGTGCTGGTGCAGAGCCTGGGACGGGGCCA +
Preference number: 1 (lower is better)
Translates to: CTTPPGAVPRWVWRP*GLGNGAGAEPGTGP
Trigger: TGGCCCCGTCCCAGGCTCTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTaGTGCTGGCTTCCTCCTCCCTGGGCCAGTCCTGCCACAGAAGCC +
Preference number: 1 (lower is better)
Translates to: RPEAKPPGRDPIPQV*CWLPPPWASPATEA
Trigger: GGCTTCTGTGGCAGGACTGGCCCAGGGAGGAGGAAGCCAGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp ACTGTGGCCTGCACGACGCCGCCGGGCGCTGTCCCCAGATGGGTCTaGCGTCCCTGGGGCTTGGGCAATGGTGCTGGTGCAGAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: TVACTTPPGAVPRWV*RPWGLGNGAGAEPG
Trigger: CCCAGGCTCTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GCCCAGACTGTGGCCTGCACGACGCCGCCGGGCGCTGTCCCCAGATaGGTCTGGCGTCCCTGGGGCTTGGGCAATGGTGCTGGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: AQTVACTTPPGAVPR*VWRPWGLGNGAGAE
Trigger: CTCTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: EAGSQRGPEQPLGKV*GAEGSMLPARPGSQ
Trigger: CTGAGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR GCA 90 bp GGTGGTGGCGAGGCCGTGGGCCGTCTCCATGGAGGTGGGCCGTCCTaGAGGTGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGT +
Preference number: 1 (lower is better)
Translates to: GGGEAVGRLHGGGPS*RWEQREEGHTRMPG
Trigger: ACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCACCTGCAGGACGGCCCACCTCCATGGAGACGGCCCACGGCCTCGCCACCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGACAGGCCGTCC +
Preference number: 1 (lower is better)
Translates to: ALLCGLPFWRLLSRM*SIAARGQLAWDRPS
Trigger: GGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR TCA 90 bp TGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTGAGCTGCCCCACAGCCGACCTGTCC +
Preference number: 1 (lower is better)
Translates to: CWVSPRRRTSCSEPP*ASGRVLSCPTADLS
Trigger: GGACAGGTCGGCTGTGGGGCAGCTCAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp AAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGGCCTaGACGACGCCGCCGGGCGCTGTCCCCAGATGGGTCTGGCGTCCC +
Preference number: 1 (lower is better)
Translates to: KERSLPQSPNAQTVA*TTPPGAVPRWVWRP
Trigger: GGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp CCAGGCCCAGGCCTCTCCCCTTGGGACGCTCACCCCATGTCTCCCTaGGGTTCCCTCCACGGTGCTGCCCTCATCCCTCAAGCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: PGPGLSPWDAHPMSP*GSLHGAALIPQAPA
Trigger: GGCAGGAGCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCCCAGGGAGACATGGGGTGAGCGTCCCAAGGGGAGAGGCCTGGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp TCCCTGGGGTTCCCTCCACGGTGCTGCCCTCATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTGGCTCTGGCGCACCTGGGCTGTGTC +
Preference number: 1 (lower is better)
Translates to: SLGFPPRCCPHPSSS*LPQWTVALAHLGCV
Trigger: GACACAGCCCAGGTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp AAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTaGCCTGCACGACGCCGCCGGGCGCTGTCCCCAGATGGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: KAKRGASHRAPMPRL*PARRRRALSPDGSG
Trigger: GCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CAGGAGGAGGTGTGGAGCTTGGTGACAAGGCCACTGAATGCTGGCTaGTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGGCCCAGCACC +
Preference number: 1 (lower is better)
Translates to: QEEVWSLVTRPLNAG*WKQLCLRPSARPST
Trigger: GGTGCTGGGCCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CCCTTGGGACGCTCACCCCATGTCTCCCTGGGGTTCCCTCCACGGTaGTGCCCTCATCCCTCAAGCTCCTGCCTCCCGCAGTGGACAGTG +
Preference number: 1 (lower is better)
Translates to: PLGRSPHVSLGFPPR*CPHPSSSCLPQWTV
Trigger: CACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCCCAGGGAGACATGGGGTGAGCGTCCCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp ATGGCTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATaGCCAGACTGTGGCCTGCACGACGCCGCCGGGCGCTGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: MATARQREEPPTEPQ*PDCGLHDAAGRCPQ
Trigger: CTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp TCTTGGGACAGACGATCCCAGATCCCCGGACACCCACAGCAGATCTaGAGCCCCGAGTCAGAGCGCGACACGGCACCGCGGTGGATGCCC +
Preference number: 1 (lower is better)
Translates to: SWDRRSQIPGHPQQI*SPESERDTAPRWMP
Trigger: GGGCATCCACCGCGGTGCCGTGTCGCGCTCTGACTCGGGGCTGCAGATCTGCTGTGGGTGTCCGGGGATCTGGGATCGTCTGTCCCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp AGCTTGGTGACAAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTaGCTCCGCCCCTCGGCCAGGCCCAGCACCGGGCTGAGACACTCT +
Preference number: 1 (lower is better)
Translates to: SLVTRPLNAGCWKQL*LRPSARPSTGLRHS
Trigger: AGAGTGTCTCAGCCCGGTGCTGGGCCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTTGTCACCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp GCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTaGCAGGCCCATGGTGATGCCAGGCCCACGGTGGCCATGCTGACA +
Preference number: 1 (lower is better)
Translates to: AAVGSWHKGSPRGTV*QAHGDARPTVAMLT
Trigger: TGTCAGCATGGCCACCGTGGGCCTGGCATCACCATGGGCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CAGGCTGCATGGGCCTCGGCAGACCAGAGCTGCACGCAGCTTGTGTaGCAAGACCCTCTGGGAAGGCAGAGGGTCCCCAATCCGTCTGCC +
Preference number: 1 (lower is better)
Translates to: QAAWASADQSCTQLV*QDPLGRQRVPNPSA
Trigger: GGCAGACGGATTGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCTGGTCTGCCGAGGCCCATGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp GGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATaGGAACTCATGGTGGGACCATCCGGAACAAGGCCAGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: GVDLLSVLTCLLQDR*ELMVGPSGTRPGPG
Trigger: GCCTGGGCCTGGCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp AAGGTTCTTACGGCTGGGTTAGGGTGGAACTCGGTCAACCCAGGGTaGAGGGGTGGGGAGCGGCCCTGGGTGAGAACAAGCCCGTGCTCA +
Preference number: 1 (lower is better)
Translates to: KVLTAGLGWNSVNPG*RGGERPWVRTSPCS
Trigger: TGAGCACGGGCTTGTTCTCACCCAGGGCCGCTCCCCACCCCTGCACCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GGAGGCCACTTTCTGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTaGATTCGGAATCCAGGGCCCCTGGGAAGATGCGGATGCGGACGA +
Preference number: 1 (lower is better)
Translates to: GGHFLGEGAAATGEL*IRNPGPLGRCGCGR
Trigger: TCGTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCAGAAAGTGGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GTTCCAGTACTGGGAGGGACAGGTGAGTCGGCAGCAGTGGGCTCATaGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCCCATGGT +
Preference number: 1 (lower is better)
Translates to: VPVLGGTGESAAVGS*HKGSPRGTVCQAHG
Trigger: ACCATGGGCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGTACTGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GCGGCCCTGGGTGAGAACAAGCCCGTGCTCAGAGTAGCCCCCGGATaGCTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAAT +
Preference number: 1 (lower is better)
Translates to: AALGENKPVLRVAPG*LLQGKERSLPQSPN
Trigger: ATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAGCCATCCGGGGGCTACTCTGAGCACGGGCTTGTTCTCACCCAGGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp ATGTCAGCAGGTGGGCCTCGGCCACAGTGCTCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTTGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: MSAGGPRPQCSGLLS*RTFSMEAARVPCCG
Trigger: ACCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCCACCTGCTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR GCA 90 bp GCAGGTAGATGTCAGCAGGTGGGCCTCGGCCACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTT +
Preference number: 1 (lower is better)
Translates to: AGRCQQVGLGHSARG*CPAGHSQWKLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCCACCTGCTGACATCTACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR CCA 90 bp TCCAGAAGGTTCCAGTACTGGGAGGGACAGGTGAGTCGGCAGCAGTaGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: SRRFQYWEGQVSRQQ*AHGTKAAHEGLCAR
Trigger: CCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GGGCCCGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTaGGACAGACGATCCCAGATCCCCGGACACCCACAGCAGATCTGC +
Preference number: 1 (lower is better)
Translates to: GPGDSLTVPNTLCPS*DRRSQIPGHPQQIC
Trigger: GCAGATCTGCTGTGGGTGTCCGGGGATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CCTTGCCCTGGTTCCGGTTTCCTGGGATGTGGCCAGCCACTGTCCTaGCAAGGTTCTTACGGCTGGGTTAGGGTGGAACTCGGTCAACCC +
Preference number: 1 (lower is better)
Translates to: PCPGSGFLGCGQPLS*QGSYGWVRVELGQP
Trigger: GGGTTGACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCCACATCCCAGGAAACCGGAACCAGGGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp CCTCGGCAGACCAGAGCTGCACGCAGCTTGTGTGCCAAGACCCTCTaGGAAGGCAGAGGGTCCCCAATCCGTCTGCCTACATTTTGGTGG +
Preference number: 1 (lower is better)
Translates to: PRQTRAARSLCAKTL*EGRGSPIRLPTFWW
Trigger: CCACCAAAATGTAGGCAGACGGATTGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCTGGTCTGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 90 bp AAGATGGTGCTTCGACCACCAATCAGTTCTCTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACCGCACTGTTGCAGGAGCAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: KMVLRPPISSLLQAS*VLRAGTALLQEQAE
Trigger: CTCTGCCTGCTCCTGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTGGTCGAAGCACCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 90 bp TTTAGTGCTGGTGTTCCAGAAGGTTCCAGTACTGGGAGGGACAGGTaGGTCGGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGG +
Preference number: 1 (lower is better)
Translates to: FSAGVPEGSSTGRDR*VGSSGLMAQRQPTR
Trigger: CCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCTGGAACACCAGCACTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp ATCCCCTCGGTCTCCCAAAGTACCGGGCTTATAGGTGCGAACCACTaGCTGGACAGAGCCGCCTTCTGTAAAACACTCACCTGGGCCACC +
Preference number: 1 (lower is better)
Translates to: IPSVSQSTGLIGANH*LDRAAFCKTLTWAT
Trigger: GGTGGCCCAGGTGAGTGTTTTACAGAAGGCGGCTCTGTCCAGGCAGTGGTTCGCACCTATAAGCCCGGTACTTTGGGAGACCGAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 90 bp GTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGACGAAGACCCAAAAACCAGAAGGAAC +
Preference number: 1 (lower is better)
Translates to: VQQPLESSGFGIQGP*EDADADEDPKTRRN
Trigger: GTTCCTTCTGGTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp CGAGAGCAGGTTTCCGAGGCTGTGAGCCCTGTTCTAGATCACACCTaGACTCCCCAGCTCCGGAAGCTTGACCTGAATCGTGACATTCGC +
Preference number: 1 (lower is better)
Translates to: REQVSEAVSPVLDHT*TPQLRKLDLNRDIR
Trigger: GCGAATGTCACGATTCAGGTCAAGCTTCCGGAGCTGGGGAGTGCAGGTGTGATCTAGAACAGGGCTCACAGCCTCGGAAACCTGCTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 90 bp GTTCATGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTaGCCCGGCTCAAGTCCACCCAAGGGGAAAGGGCCTCTTAGAGCC +
Preference number: 1 (lower is better)
Translates to: VHGNAERSQKKRSSP*PGSSPPKGKGPLRA
Trigger: GGCTCTAAGAGGCCCTTTCCCCTTGGGTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 90 bp AACAGAGGGACTCGCTGGGCTCAAGAAGACAGAGGTTCATGGGAATaGAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTC +
Preference number: 1 (lower is better)
Translates to: NRGTRWAQEDRGSWE*RAQSKEAKFSLTRL
Trigger: GAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCATGAACCTCTGTCTTCTTGAGCCCAGCGAGTCCCTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACGGCCCCTCGGAGCCTaGTGGCCACAGGGGGCATGC +
Preference number: 2 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPRPLGA*WPQGAC
Trigger: GCATGCCCCCTGTGGCCACCAGGCTCCGAGGGGCCG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGCGCTGTCCCCAGATaGGTCTGGCGTCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGAVPR*VWRPWG
Trigger: GCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGAGGTGGGGCTGGTGGTaGCGAGGCCGTGGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWRWGWW*RGRGPS
Trigger: AGACGGCCCACGGCCTCGCCACCACCAGCCCCACCT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTTCAGCTCGGCGGCGCTaGGATCGGGGCTGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCASARRR*DRGWGH
Trigger: GTGGCCCCAGCCCCGATCCCAGCGCCGCCGAGCTGA...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGCAATGGTGCTGGTaGAGAGCCTGGGACGGGGCC +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGQWCW*RAWDGA
Trigger: GGCCCCGTCCCAGGCTCTGCACCAGCACCATTGCCC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCGCCCAGACTGTGGCCTaGACGACGCCGCCGGGCGCT +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSAQTVA*TTPPGA
Trigger: AGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGC...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CGCAGGGCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGTGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: RRASSAPPSGGGASTSSECCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...CTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGCCCTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGTGGTGGCGAGGCCGTaGGCCGTCTCCATGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWVVARP*AVSMEV
Trigger: CACCTCCATGGAGACGGCCCACGGCCTCGCCACCAC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR-3UTR TCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPLLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCCAGGGCGGCACCCATaGACCCCAAGGCCCCGAGCA +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSPGRHP*TPRPRA
Trigger: TGCTCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGTCCTGCCTCCCGCAGTaGACAGTGGCTCTGGCGCAC +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWSCLPQ*TVALAH
Trigger: GTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGA...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGTCCCCAGATGGGTCTaGCGTCCCTGGGGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAVPRWV*RPWGLG
Trigger: GCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGAC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCCACCTCAGCACCCCTaGGTAGCTGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAPPQHP*VAGTTG
Trigger: GCCTGTGGTCCCAGCTACTCAGGGGTGCTGAGGTGG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGTGGCCACAGGGGGCATaGAGACAGGAGGCCGGCTCA +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGWPQGA*RQEAGS
Trigger: TGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCA...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGCAGGGACCGCACTGTTaGAGGAGCAGGCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVQGPHC*RSRQSQ
Trigger: CTGGCTCTGCCTGCTCCTGCAACAGTGCGGTCCCTG...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGGGCCCCTGGGAAGATaGGGATGCGGACGAAGACCC +
Preference number: 2 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAGPLGR*GCGRRP
Trigger: GGGTCTTCGTCCGCATCCGCATCTTCCCAGGGGCCC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGCCACGAGGGACTGTGTaGCAGGCCCATGGTGATGCC +
Preference number: 2 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVPRGTV*QAHGDA
Trigger: GGCATCACCATGGGCCTGGCACACAGTCCCTCGTGG...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCCACCAGGTCCTCCCTaGCAGGGGCCTGCCAAACAG +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGPPGPP*QGPAKQ
Trigger: CTGTTTGGCAGGCCCCTGCCAGGGAGGACCTGGTGG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCATGCTGTCCACTGCTaGGTCTCGCCCAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGHAVHC*VSPRRR
Trigger: CCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGAC +
Preference number: 2 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVGIQGP*EDADAD
Trigger: GTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGAC +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGIQGP*EDADAD
Trigger: GTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGAGGGCCCCTCAAGGCTaGAAGAAGAGCCTGACCGGC +
Preference number: 2 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVRAPQG*KKSLTG
Trigger: GCCGGTCAGGCTCTTCTTCCAGCCTTGAGGGGCCCT...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCGACACGGCACCGCGGTaGATGCCCTCTGGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSDTAPR*MPSGPP
Trigger: AGGAGGCCCAGAGGGCATCCACCGCGGTGCCGTGTC...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: LAQEADLMLGATVSLREGLLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCCACGGTGGCCATGCTaGCAAGGGAAGGAGGGAGCG +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSPRWPC*QGKEGA
Trigger: CGCTCCCTCCTTCCCTTGTCAGCATGGCCACCGTGG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTCAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 2 (lower is better)
Translates to: PPSGGGASTSSESFSSSSQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...AGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCAGGGACCGCACTGTTaGAGGAGCAGGCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGQGPHC*RSRQSQ
Trigger: CTGGCTCTGCCTGCTCCTGCAACAGTGCGGTCCCTG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCAGGGCGGCACCCATaGACCCCAAGGCCCCGAGCA +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPPGRHP*TPRPRA
Trigger: TGCTCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTCCCTGGGCCAGTCCTaGCACAGAAGCCTGAGACAG +
Preference number: 2 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVSLGQS*HRSLRQ
Trigger: CTGTCTCAGGCTTCTGTGGCAGGACTGGCCCAGGGA...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGGGGTGGATCCAGCCCTaGGTCACCAGGCCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHREGWIQP*VTRPRH
Trigger: GTGCCTGGGCCTGGTGACCCAGGGCTGGATCCACCC...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGGGGAGAGAGGTGCTTaGGGTGGGGTAGAGGTGCGT +
Preference number: 2 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAGERGA*GGVEVR
Trigger: ACGCACCTCTACCCCACCCCAAGCACCTCTCTCCCC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGTGGCTCTGGCGCACCTaGGCTGTGTCTGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRWLWRT*AVSVSL
Trigger: CAGGGAGACAGACACAGCCCAGGTGCGCCAGAGCCA...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGCCAGGCCGCCACAGTaGCACGCAGGGTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: APEGPSRTDSLQETGTELARPPQ*HAGWVD
Trigger: GTCCACCCACCCTGCGTGTCACTGTGGCGGCCTGGC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCACCAGGGAGGGCACTaGGGCCGCGCAAACACGGCA +
Preference number: 2 (lower is better)
Translates to: KATECWLLEAAVPPPLGQHQGGH*GRANTA
Trigger: TGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGGTG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAPGGAL*CHQSQH
Trigger: GTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGACTGGGAGGGACAGGTaGGTCGGCAGCAGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHRETGRDR*VGSSGL
Trigger: GAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCCAAACAGAAGCCCCTaGACCTGGAGGGGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAPNRSP*TWRGLV
Trigger: CACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGGCCAGCCACTGTCCTaGCAAGGTTCTTACGGCTGG +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAGQPLS*QGSYGW
Trigger: CCAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCACCCCATGTCTCCCTaGGGTTCCCTCCACGGTGCT +
Preference number: 2 (lower is better)
Translates to: LAQEADLMLGATVSLREGHPMSP*GSLHGA
Trigger: AGCACCGTGGAGGGAACCCCAGGGAGACATGGGGTG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCACTCCCGCCGCCTGTaGCCACAACAGCATTCACTC +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAHSRRL*PQQHSL
Trigger: GAGTGAATGCTGTTGTGGCCACAGGCGGCGGGAGTG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTCACACTCGGATGCCTaGTGCCACGCCACCCGCTCC +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHRESHSDA*CHATRS
Trigger: GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: LAQEADLMLGATVSLREGPGGAL*CHQSQH
Trigger: GTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTCCCTGGCAGGGGCCTaGCAAACAGAAGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPASLAGA*QTEAPA
Trigger: TGCAGGGGCTTCTGTTTGGCAGGCCCCTGCCAGGGA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCAAATCAGAGAGAACTaGAAGGGGGCCGGGCGCGGA +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSQIREN*KGAGRG
Trigger: TCCGCGCCCGGCCCCCTTGCAGTTCTCTCTGATTTG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACAGCGGAGGCCACACGTaGGCAGCCCCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHSGGHT*AAPAPA
Trigger: GGCTGGGGCTGGGGCTGCCCACGTGTGGCCTCCGCT...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAAAGGCCACTGAATGCTaGCTGCTGGAAGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPKATEC*LLEAAV
Trigger: CACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCTTGGGCAATGGTGCTaGTGCAGAGCCTGGGACGGG +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHRELGQWC*CRAWDG
Trigger: CCCGTCCCAGGCTCTGCACCAGCACCATTGCCCAAG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTCCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 2 (lower is better)
Translates to: CSGLLSCRTFSMEAARVPPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...AGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCCCCTGAACATCTGTaGAGATGGTGCTTCGACCAC +
Preference number: 2 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAAPEHL*RWCFDH
Trigger: GTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGCTCTGGCACCAGGACTaGTGGCCAGAGGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLLWHQD*WPEAGA
Trigger: GGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAG...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PGRALRPRKHGRGQKAATEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGCTGGAAGCAGCTGTaGCTCCGCCCCTCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPCWKQL*LRPSAR
Trigger: CCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCA...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCAAACAGAAGCCCCTaGACCTGGAGGGGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHREPNRSP*TWRGLV
Trigger: CACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTG +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHREHPSSS*LPQWTV
Trigger: CACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGGGTTCCCTCCACGGTaGTGCCCTCATCCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPGFPPR*CPHPSS
Trigger: GCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: APEGPSRTDSLQETGTELPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGAGCGGAGGCCACACGTaGGCAGCCCCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVSGGHT*AAPAPA
Trigger: GGCTGGGGCTGGGGCTGCCCACGTGTGGCCTCCGCT...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTGTGCCAAGACCCTCTaGGAAGGCAGAGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPACAKTL*EGRGSP
Trigger: TGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: GGGASTSSESFSSSSSWMCGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...CATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGTTCACTGTGCTCTTTaGTCAAGAGTCACCACGGCC +
Preference number: 2 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRVHCAL*SRVTTA
Trigger: GGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAAC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTCACCAGGGAGGGCACTaGGGCCGCGCAAACACGGCA +
Preference number: 2 (lower is better)
Translates to: TSRKALAPGLMARGWGLGHQGGH*GRANTA
Trigger: TGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGGTG...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCCCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGPGGAL*CHQSQH
Trigger: GTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGG...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCTGCCACAGAAGCCTaGGACAGAACAAACCAAATC +
Preference number: 2 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPATEA*DRTNQI
Trigger: GATTTGGTTTGTTCTGTCTCAGGCTTCTGTGGCAGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCAACGATGAGCCCATCTaGGCACATCAGACGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSNDEPI*AHQTAA
Trigger: TGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTT...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTGCACGCAGCTTGTGTaGCAAGACCCTCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPACTQLV*QDPLGR
Trigger: CCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTGACACGCAGGGTGGGTaGACAGGCACTGTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPADTQGG*TGTVSF
Trigger: GAAGGAAACAGTGCCTGTCCACCCACCCTGCGTGTC...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGGCCACTGGAGAGCTCTaGATTCGGAATCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: KATECWLLEAAVPPPLGQATGEL*IRNPGP
Trigger: GGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGC...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACAGGAGGCCACTTTCTaGGGGAAGGTGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPQEATF*GKVQQP
Trigger: TGGCTGCTGCACCTTCCCCCAGAAAGTGGCCTCCTG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGACCGATGCGAACTCATaGTGGGACCATCCGGAACAA +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGTDANS*WDHPEQ
Trigger: TTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGT...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCAGAAGGTTCCAGTACTaGGAGGGACAGGTGAGTCGG +
Preference number: 2 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSRRFQY*EGQVSR
Trigger: CCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCT...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGGTCTCAGGCTGGAGTaGGTGGGTGGGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPGLRLE*VGGCVC
Trigger: ACACACACACCCACCCACCCACTCCAGCCTGAGACC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: LAQEADLMLGATVSLREGMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCCTGCCACAGAAGCCTaGGACAGAACAAACCAAATC +
Preference number: 2 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAPATEA*DRTNQI
Trigger: GATTTGGTTTGTTCTGTCTCAGGCTTCTGTGGCAGG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTTGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTG +
Preference number: 2 (lower is better)
Translates to: TSRKALAPGLMARGWGLGCSEPP*ASGRVL
Trigger: CAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCA...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGAGCTTGGGAAGACGTaGTCCAGGGGCTCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPELGKT*SRGSPN
Trigger: ATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTCCGGAAGCTTGACCTaGATCGTGACATTCGCACGG +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPASGSLT*IVTFAR
Trigger: CCGTGCGAATGTCACGATTCAGGTCAAGCTTCCGGA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACCAGCCCACAGGACCCTaGGGAACGGGGGCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHQPTGP*GTGALN
Trigger: GTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTG...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTGATGCGAACTCATGGTaGGACCATCCGGAACAAGGC +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPADANSW*DHPEQG
Trigger: GCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATC...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGAAGACAGAGGTTCATaGGAATGCAGAGCGCAGTCA +
Preference number: 2 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAEDRGS*ECRAQS
Trigger: TGACTGCGCTCTGCATTCCCATGAACCTCTGTCTTC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTAGAGTAGCCCCCGGATaGCTACTGCAAGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPARVAPG*LLQGKE
Trigger: CTCTTTGCCTTGCAGTAGCCATCCGGGGGCTACTCT...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp AGTGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 2 (lower is better)
Translates to: SARGCCPAGHSQWKLLGSRGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...GGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR TCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTAATGGCAAAAGAGAATaGGGAGGCCACCAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPANGKRE*GGHQVL
Trigger: GAGGACCTGGTGGCCTCCTCATTCTCTTTTGCCATT...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCCAAGAGACAGGGACTaGGCTTGGGAAGACGTGATC +
Preference number: 2 (lower is better)
Translates to: KATECWLLEAAVPPPLGQPRDRD*AWEDVI
Trigger: GATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCAAATCAGAGAGAACTaGAAGGGGGCCGGGCGCGGA +
Preference number: 2 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPQIREN*KGAGRG
Trigger: TCCGCGCCCGGCCCCCTTGCAGTTCTCTCTGATTTG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAAAGGCCACTGAATGCTaGCTGCTGGAAGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPKATEC*LLEAAV
Trigger: CACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAAGGTGCAGCAGCCACTaGAGAGCTCTGGATTCGGAA +
Preference number: 2 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPRCSSH*RALDSE
Trigger: TTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCT...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGCCAGGCCTCTCCCCTTaGGACGCTCACCCCATGTCT +
Preference number: 2 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMPGLSP*DAHPMS
Trigger: AGACATGGGGTGAGCGTCCCAAGGGGAGAGGCCTGG...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTACCGATGCGAACTCATaGTGGGACCATCCGGAACAA +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPATDANS*WDHPEQ
Trigger: TTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGT...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACGAGCGGGGGAGCAGGTaGCTGTGTGAGCGGACGCCC +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHERGSR*LCERTP
Trigger: GGGCGTCCGCTCACACAGCCACCTGCTCCCCCGCTC...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCTGCCTACATTTTGGTaGCACTCCTGGAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: WEQREEGHTRMPGATPPALPTFW*HSWSCL
Trigger: AAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp AGTGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: SARGCCPAGHSQWKLLGSPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...GGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR CAA 90 bp GACCCTCTGGGAAGGCAGAGGGTCCCCAATCCGTCTGCCTACATTTaGGTGGCACTCCTGGAGCTGCCTTCTCTCTCTCCCCCGTGTGTG +
Preference number: 2 (lower is better)
Translates to: DPLGRQRVPNPSAYI*VALLELPSLSPPCV
Trigger: CACACACGGGGGAGAGAGAGAAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGGATTGGGGACCCTCTGCCTTCCCAGAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CAA 90 bp AGGGCCCGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTaGGGACAGACGATCCCAGATCCCCGGACACCCACAGCAGATCTG +
Preference number: 2 (lower is better)
Translates to: RARGLPNCAKYAVSL*GQTIPDPRTPTADL
Trigger: CAGATCTGCTGTGGGTGTCCGGGGATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGCCCCACTCTCCGGTaGAGGGCGTCTATTTTCTTC +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLGPTLR*RASIFF
Trigger: GAAGAAAATAGACGCCCTTCACCGGAGAGTGGGGCC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGTCCCTGGCAGGGGCCTaGCAAACAGAAGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVSLAGA*QTEAPA
Trigger: TGCAGGGGCTTCTGTTTGGCAGGCCCCTGCCAGGGA...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGGCATGTGTGAACATGTaGGTGAGCATGTGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: STAGSRPGGGPHARSHREACVNM*VSMCKW
Trigger: CCACTTGCACATGCTCACGCACATGTTCACACATGC...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGCCACGAGGGACTGTGTaGCAGGCCCATGGTGATGCC +
Preference number: 2 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVPRGTV*QAHGDA
Trigger: GGCATCACCATGGGCCTGGCACACAGTCCCTCGTGG...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGCCACTGGAGAGCTCTaGATTCGGAATCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMATGEL*IRNPGP
Trigger: GGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTAGATGGAGAGACCTCTaGCCCCGAAAGTCAGGACCC +
Preference number: 2 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPRWRDL*PRKSGP
Trigger: GGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCT...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGATGCGAACTCATGGTaGGACCATCCGGAACAAGGC +
Preference number: 2 (lower is better)
Translates to: APEGPSRTDSLQETGTELDANSW*DHPEQG
Trigger: GCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCCTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: PPLPLNICEDGASTTNQFLLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGCAGCCCACAGGACCCTaGGGAACGGGGGCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKQPTGP*GTGALN
Trigger: GTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTG...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCAGGGCCCCTCAAGGCTaGAAGAAGAGCCTGACCGGC +
Preference number: 2 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIRAPQG*KKSLTG
Trigger: GCCGGTCAGGCTCTTCTTCCAGCCTTGAGGGGCCCT...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACCAGGCCTCTCCCCTTaGGACGCTCACCCCATGTCT +
Preference number: 2 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSPGLSP*DAHPMS
Trigger: AGACATGGGGTGAGCGTCCCAAGGGGAGAGGCCTGG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGCCAGGCTCTCAGAGTaGGGTCAGCTCGGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPARLSE*GQLGGA
Trigger: AGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTAAAAGAGAAGAGAACTaGAAGGGGACATTCCAATGG +
Preference number: 2 (lower is better)
Translates to: LAQEADLMLGATVSLREGKREEN*KGTFQW
Trigger: CCATTGGAATGTCCCCTTGCAGTTCTCTTCTCTTTT...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCTGGCACTCCTGGAGCTaGCTTCTCTCTCTCCCCCGT +
Preference number: 2 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIWHSWS*LLSLPR
Trigger: ACGGGGGAGAGAGAGAAGGCAGCTCCAGGAGTGCCA...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGGGGCCTCTTAGAGCCTaGACCCCCGGCCAGGCACCT +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRGPLRA*TPGQAP
Trigger: AGGTGCCTGGCCGGGGGTGCAGGCTCTAAGAGGCCC...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCCACCAGGTCCTCCCTaGCAGGGGCCTGCCAAACAG +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPPPGPP*QGPAKQ
Trigger: CTGTTTGGCAGGCCCCTGCCAGGGAGGACCTGGTGG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCTGGGGTAGAGGTGCGTaGGAGATGCTCGGTCCGAGT +
Preference number: 2 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIWGRGA*EMLGPS
Trigger: ACTCGGACCGAGCATCTCCCACGCACCTCTACCCCA...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: TSRKALAPGLMARGWGLGMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTCGCATTCTTTCCCCATaGATTGTTAAAGCCACGACC +
Preference number: 2 (lower is better)
Translates to: APEGPSRTDSLQETGTELRILSP*IVKATT
Trigger: GGTCGTGGCTTTAACAATTCATGGGGAAAGAATGCG...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTG +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHHPSSS*LPQWTV
Trigger: CACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTGGTCCCCAATCCGTCTaGCTACATTTTGGTGGCACT +
Preference number: 2 (lower is better)
Translates to: TSRKALAPGLMARGWGLGGPQSV*LHFGGT
Trigger: AGTGCCACCAAAATGTAGGCAGACGGATTGGGGACC...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCCCACAGAGCCCCAATaGCCAGACTGTGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPPTEPQ*PDCGLH
Trigger: GTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCACTCGGATGCCTGGTaGCACGCCACCCGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRHSDAW*HATRSY
Trigger: GTAGGAGCGGGTGGCGTGGCACCAGGCATCCGAGTG...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGGCAGGGAGCTGGGTGTaGGGACCATGCTGTCCACTG +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRAGSWV*GPCCPL
Trigger: CAGTGGACAGCATGGTCCTCACACCCAGCTCCCTGC...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGCGCATTCTTTCCCCATaGATTGTTAAAGCCACGACC +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRILSP*IVKATT
Trigger: GGTCGTGGCTTTAACAATTCATGGGGAAAGAATGCG...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGGAGCTTGGGAAGACGTaGTCCAGGGGCTCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKELGKT*SRGSPN
Trigger: ATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTC...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACC +
Preference number: 2 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPLGMES*CPSSCT
Trigger: GGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACACTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACC +
Preference number: 2 (lower is better)
Translates to: PGRALRPRKHGRGQKAATLGMES*CPSSCT
Trigger: GGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAG...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCAACTCCCTTTGCCATCTaGGGCCCAGGAGGTTTACCT +
Preference number: 2 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSTPFAI*GPGGLP
Trigger: AGGTAAACCTCCTGGGCCGCAGATGGCAAAGGGAGT...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGAGGTGCGTGGGAGATaGTCGGTCCGAGTGCACACA +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPEVRGR*SVRVHT
Trigger: TGTGTGCACTCGGACCGAGCATCTCCCACGCACCTC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGCTGGGAAGATGCGGATaGGGACGAAGACCCAAAAAC +
Preference number: 2 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVLGRCG*GRRPKN
Trigger: GTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAG...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCATACCGGGCTTATAGGTaGGAACCACTGCCTGGACAG +
Preference number: 2 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSYRAYR*EPLPGQ
Trigger: CTGTCCAGGCAGTGGTTCGCACCTATAAGCCCGGTA...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGGAGAGGTGCTTGGGGTaGGGTAGAGGTGCGTGGGAG +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRERCLG*GRGAWE
Trigger: CTCCCACGCACCTCTACCCCACCCCAAGCACCTCTC...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACGTGCGAACCACTGCCTaGACAGAGCCGCCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHVRTTA*TEPPSV
Trigger: TACAGAAGGCGGCTCTGTCCAGGCAGTGGTTCGCAC...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGACCAGCCCTGACACATaGCTCCCAGCAGACACGGCC +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRTSPDT*LPADTA
Trigger: GGCCGTGTCTGCTGGGAGCCATGTGTCAGGGCTGGT...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GGGASTSSESFSSSSSWMRCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...CATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR GCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGAGGGACAGTTCACTGTaGTCTTTGATCAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRDSSL*SLIKSH
Trigger: GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCTGATCTTGAATTCCTaGGCTCAAGTGATCTATCCC +
Preference number: 2 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPLILNS*AQVIYP
Trigger: GGGATAGATCACTTGAGCCCAGGAATTCAAGATCAG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACAATGGCAAAAGAGAATaGGGAGGCCACCAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHNGKRE*GGHQVL
Trigger: GAGGACCTGGTGGCCTCCTCATTCTCTTTTGCCATT...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAACGATGAGCCCATCTaGGCACATCAGACGGCAGCA +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPNDEPI*AHQTAA
Trigger: TGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGCTGGGAAGATGCGGATaGGGACGAAGACCCAAAAAC +
Preference number: 2 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKLGRCG*GRRPKN
Trigger: GTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAG...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAGGTGCAGCAGCCACTaGAGAGCTCTGGATTCGGAA +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPRCSSH*RALDSE
Trigger: TTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGTCCGGAAGCTTGACCTaGATCGTGACATTCGCACGG +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRSGSLT*IVTFAR
Trigger: CCGTGCGAATGTCACGATTCAGGTCAAGCTTCCGGA...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCAAGGTTCTTACGGCTaGGTTAGGGTGGAACTCGGT +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPQGSYG*VRVELG
Trigger: ACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR TCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: RETQKGQFTVLFDQESPRMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGCATGTGTGAACATGTaGGTGAGCATGTGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPACVNM*VSMCKW
Trigger: CCACTTGCACATGCTCACGCACATGTTCACACATGC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACAGGGACAGTTCACTGTaGTCTTTGATCAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHRDSSL*SLIKSH
Trigger: GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCT...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCAAAAGAGAAGAGAACTaGAAGGGGACATTCCAATGG +
Preference number: 2 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIKREEN*KGTFQW
Trigger: CCATTGGAATGTCCCCTTGCAGTTCTCTTCTCTTTT...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp CCGAGGGGATGGCCGGGGAGACAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: PRGWPGRQPGGR*APRAARWARSQ
Trigger: CTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGTCTCCCCGGCCATCCCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR GCA 72 bp TCGGCCAGGCCCAGCACCGGGCTGAGACACTCTAGCTaGCCAGGGCGGCACCCATGCACCCCAAGGCCCCGA +
Preference number: 3 (lower is better)
Translates to: SARPSTGLRHSS*PGRHPCTPRPR
Trigger: TCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCCTGGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp GTGGCCTGCACGACGCCGCCGGGCGCTGTCCCCAGATaGGTCTGGCGTCCCTGGGGCTTGGGCAATGGTGCT +
Preference number: 3 (lower is better)
Translates to: VACTTPPGAVPR*VWRPWGLGNGA
Trigger: AGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGCCCAGGCACTCCCTTaGCCATCTGCGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGAQALP*PSAAQE
Trigger: CTCCTGGGCCGCAGATGGCAAAGGGAGTGCCTGGGC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTAGGCTGGAGTGGGCCTaGACCTCCCCAGCTCCGGCA +
Preference number: 3 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCARLEWA*TSPAPA
Trigger: TGCCGGAGCTGGGGAGGTCAAGGCCCACTCCAGCCT...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp AGCCTCCCACAGAGCCCCAATGCCCAGACTGTGGCCTaGACGACGCCGCCGGGCGCTGTCCCCAGATGGGTC +
Preference number: 3 (lower is better)
Translates to: SLPQSPNAQTVA*TTPPGAVPRWV
Trigger: GACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TGCACGACGCCGCCGGGCGCTGTCCCCAGATGGGTCTaGCGTCCCTGGGGCTTGGGCAATGGTGCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: CTTPPGAVPRWV*RPWGLGNGAGA
Trigger: TGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCCCGGCGGCGTCGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp AACTCTCAGGGGAGCTGCTTTCCCGCAGGGCCAGCTCTGCGCCACCCAGTGGGGACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 3 (lower is better)
Translates to: NSQGSCFPAGPALRHPVGTARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...CCCCACTGGGTGGCGCAGAGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTAGGCAGGACGATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAARQDDH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATCGTCCTGCCT...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp TCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTGAGCTGCCCCACAGCC +
Preference number: 3 (lower is better)
Translates to: SPRRRTSCSEPP*ASGRVLSCPTA
Trigger: GGCTGTGGGGCAGCTCAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATaGCCAGACTGTGGCCTGCACGACGCCGCCGGGCGC +
Preference number: 3 (lower is better)
Translates to: ARQREEPPTEPQ*PDCGLHDAAGR
Trigger: GCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCA +
Preference number: 3 (lower is better)
Translates to: SQRGPEQPLGKV*GAEGSMLPARP
Trigger: TGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR CCA 72 bp AGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTaGCCTGCACGACGCCGCCGGGCGCTGTCCCCAGAT +
Preference number: 3 (lower is better)
Translates to: RGASHRAPMPRL*PARRRRALSPD
Trigger: ATCTGGGGACAGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: CGLPFWRLLSRM*SIAARGQLAWD
Trigger: GTCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR CCA 72 bp GTGCTGTCGGGGGCCTTGCTCTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCG +
Preference number: 3 (lower is better)
Translates to: VLSGALLCGLPF*RLLSRMWSIAA
Trigger: CGCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR CAA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGCACTGTTTCCTTCATaGACCGTGCCTGGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGALFPS*TVPGAP
Trigger: GGGGGCTCCAGGCACGGTCAATGAAGGAAACAGTGC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTAGAGCTGCACGCAGCTaGTGTGCCAAGACCCTCTGG +
Preference number: 3 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAARAARS*CAKTLW
Trigger: CCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCT...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTaGCACGCCACCCGCTCCTACCGATCTGGAGCCCCA +
Preference number: 3 (lower is better)
Translates to: GAEGGGSHSDAW*HATRSYRSGAP
Trigger: TGGGGCTCCAGATCGGTAGGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp CCCTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTaGCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCT +
Preference number: 3 (lower is better)
Translates to: PSAKSGEPRAPC*QLGQALRVGSA
Trigger: AGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
3UTR GCA 72 bp ACCGTAGGGTGCTGTCGGGGGCCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGA +
Preference number: 3 (lower is better)
Translates to: TVGCCRGPCSAA*PSGGCCPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCACCCTACGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR CCA 72 bp ATGGGTCTGGCGTCCCTGGGGCTTGGGCAATGGTGCTaGTGCAGAGCCTGGGACGGGGCCAGCATGGCCTCA +
Preference number: 3 (lower is better)
Translates to: MGLASLGLGQWC*CRAWDGASMAS
Trigger: TGAGGCCATGCTGGCCCCGTCCCAGGCTCTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp GTGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTaGTGCCACGCCACCCGCTCCTACCGATCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: VGAEGGGSHSDA*CHATRSYRSGA
Trigger: GGCTCCAGATCGGTAGGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAAT +
Preference number: 3 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVEEVWS*VTRPLN
Trigger: ATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAAT +
Preference number: 3 (lower is better)
Translates to: LGQALRVGSARRRWDRGWEEVWS*VTRPLN
Trigger: ATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGGCAGGACGATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: STAGSRPGGGPHARSHRERQDDH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATCGTCCTGCCT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCCGTCTGCCTACATTTaGGTGGCACTCCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAPSAYI*VALLEL
Trigger: CAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GTGCAGGGAGCTGGGTGTGAGGACCATGCTGTCCACTaGTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCG +
Preference number: 3 (lower is better)
Translates to: VQGAGCEDHAVH*WVSPRRRTSCS
Trigger: CGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATGGTCCTCACACCCAGCTCCCTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp TTCCCTCCACGGTGCTGCCCTCATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTGGCTCTGGCGCACCTG +
Preference number: 3 (lower is better)
Translates to: FPPRCCPHPSSS*LPQWTVALAHL
Trigger: CAGGTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATGAGGGCAGCACCGTGGAGGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp ACGGCTGGGTTAGGGTGGAACTCGGTCAACCCAGGGTaGAGGGGTGGGGAGCGGCCCTGGGTGAGAACAAGC +
Preference number: 3 (lower is better)
Translates to: TAGLGWNSVNPG*RGGERPWVRTS
Trigger: GCTTGTTCTCACCCAGGGCCGCTCCCCACCCCTGCACCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CAGGGAGCTGGGTGTGAGGACCATGCTGTCCACTGCTaGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAG +
Preference number: 3 (lower is better)
Translates to: QGAGCEDHAVHC*VSPRRRTSCSE
Trigger: CTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATGGTCCTCACACCCAGCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp GGCCTCTCCCCTTGGGACGCTCACCCCATGTCTCCCTaGGGTTCCCTCCACGGTGCTGCCCTCATCCCTCAA +
Preference number: 3 (lower is better)
Translates to: GLSPWDAHPMSP*GSLHGAALIPQ
Trigger: TTGAGGGATGAGGGCAGCACCGTGGAGGGAACCCCAGGGAGACATGGGGTGAGCGTCCCAAGGGGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GTGTGGAGCTTGGTGACAAGGCCACTGAATGCTGGCTaGTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGG +
Preference number: 3 (lower is better)
Translates to: VWSLVTRPLNAG*WKQLCLRPSAR
Trigger: CCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTTGTCACCAAGCTCCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CTCATCCCTCAAGCTCCTGCCTCCCGCAGTGGACAGTaGCTCTGGCGCACCTGGGCTGTGTCTGTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LIPQAPASRSGQ*LWRTWAVSVSL
Trigger: CAGGGAGACAGACACAGCCCAGGTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTAGGGTGCTGTCGGGGG +
Preference number: 3 (lower is better)
Translates to: RPRRASPHPLRG*GKTGTVGCCRG
Trigger: CCCCCGACAGCACCCTACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR GCA 72 bp TGGGCCTCGGCAGACCAGAGCTGCACGCAGCTTGTGTaGCAAGACCCTCTGGGAAGGCAGAGGGTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: WASADQSCTQLV*QDPLGRQRVPN
Trigger: ATTGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCTGGTCTGCCGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CGACAGCCAGGCCGCCACAGTGACACGCAGGGTGGGTaGACAGGCACTGTTTCCTTCATTGACCGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: RQPGRHSDTQGG*TGTVSFIDRAW
Trigger: CCAGGCACGGTCAATGAAGGAAACAGTGCCTGTCCACCCACCCTGCGTGTCACTGTGGCGGCCTGGCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp AGGAGGCCACTTTCTGGGGGAAGGTGCAGCAGCCACTaGAGAGCTCTGGATTCGGAATCCAGGGCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: RRPLSGGRCSSH*RALDSESRAPG
Trigger: CCCAGGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCAGAAAGTGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTAGTTCACTGTGCTCTTaGATCAAGAGTCACCACGGC +
Preference number: 3 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCASSLCS*IKSHHG
Trigger: GCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACT...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTCTGCCTACATTTaGGTGGCACTCCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPPSAYI*VALLEL
Trigger: CAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp CCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTaGGCTTGGGAAGACGTGATCCAGGGGCTCTCCCAA +
Preference number: 3 (lower is better)
Translates to: PLEDGLPPRDRD*AWEDVIQGLSQ
Trigger: TTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TTCCAGTACTGGGAGGGACAGGTGAGTCGGCAGCAGTaGGCTCATGGCACAAAGGCAGCCCACGAGGGACTG +
Preference number: 3 (lower is better)
Translates to: FQYWEGQVSRQQ*AHGTKAAHEGL
Trigger: CAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGTACTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CACTGTCCTGCCAAGGTTCTTACGGCTGGGTTAGGGTaGAACTCGGTCAACCCAGGGTGCAGGGGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: HCPAKVLTAGLG*NSVNPGCRGGE
Trigger: CTCCCCACCCCTGCACCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTGGCAGGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CTCCTGCCCTTGCCCTGGTTCCGGTTTCCTGGGATGTaGCCAGCCACTGTCCTGCCAAGGTTCTTACGGCTG +
Preference number: 3 (lower is better)
Translates to: LLPLPWFRFPGM*PATVLPRFLRL
Trigger: CAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCCACATCCCAGGAAACCGGAACCAGGGCAAGGGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGACCGTAGGGTGCTGTCG +
Preference number: 3 (lower is better)
Translates to: STSSESFSSSSS*MGEDGDRRVLS
Trigger: CGACAGCACCCTACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR TCA 72 bp CCGCTCAGCCCACAGGACCCTGGGGAACGGGGGCTCTaGACTAGGGATGGAAAGCTGCTGTCCTTCATCTTG +
Preference number: 3 (lower is better)
Translates to: PLSPQDPGERGL*TRDGKLLSFIL
Trigger: CAAGATGAAGGACAGCAGCTTTCCATCCCTAGTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTGAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp TGCCAAACAGAAGCCCCTGCACCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCACCAGGAGGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: CQTEAPAPGGAL*CHQSQHQEEVW
Trigger: CCACACCTCCTCCTGGTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp ACCAGAGCTGCACGCAGCTTGTGTGCCAAGACCCTCTaGGAAGGCAGAGGGTCCCCAATCCGTCTGCCTACA +
Preference number: 3 (lower is better)
Translates to: TRAARSLCAKTL*EGRGSPIRLPT
Trigger: TGTAGGCAGACGGATTGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp TGTGGCCAGCCACTGTCCTGCCAAGGTTCTTACGGCTaGGTTAGGGTGGAACTCGGTCAACCCAGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: CGQPLSCQGSYG*VRVELGQPRVQ
Trigger: CTGCACCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp AGTGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTTGCTGTGGTGACGACG +
Preference number: 3 (lower is better)
Translates to: SARGCCPAGHSQ*KLLGSLAVVTT
Trigger: CGTCGTCACCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR-3UTR CAA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGATGACCTTAGGAGTTaGAGACCAGCCCGGCCAACA +
Preference number: 3 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLDDLRS*RPARPT
Trigger: TGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCATC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp GGTGTTCCAGAAGGTTCCAGTACTGGGAGGGACAGGTaGGTCGGCAGCAGTGGGCTCATGGCACAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GVPEGSSTGRDR*VGSSGLMAQRQ
Trigger: CTGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCTGGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp TGGCCTGGGACAGGCCGTCCGAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGGCCGAGGGGATGGCCG +
Preference number: 3 (lower is better)
Translates to: WPGTGRPRCLNR*FLHKEGPRGWP
Trigger: CGGCCATCCCCTCGGCCCCTCTTTATGAAGAAATCACCTATTCAGGCATCTCGGACGGCCTGTCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
3UTR GCA 72 bp CTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATaGGAACTCATGGTGGGACCATCCGGAACAAGGCCA +
Preference number: 3 (lower is better)
Translates to: LLSVLTCLLQDR*ELMVGPSGTRP
Trigger: TGGCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp AGACCCTCTGGGAAGGCAGAGGGTCCCCAATCCGTCTaGCTACATTTTGGTGGCACTCCTGGAGCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: RPSGKAEGPQSV*LHFGGTPGAAF
Trigger: GAAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGGATTGGGGACCCTCTGCCTTCCCAGAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp CCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGACGAAGACCCAAAAACC +
Preference number: 3 (lower is better)
Translates to: PLESSGFGIQGP*EDADADEDPKT
Trigger: GGTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp GAAGGCAGAGGGTCCCCAATCCGTCTGCCTACATTTTaGTGGCACTCCTGGAGCTGCCTTCTCTCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: EGRGSPIRLPTF*WHSWSCLLSLP
Trigger: GGGGAGAGAGAGAAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGGATTGGGGACCCTCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCAGCACTGTTTCCTTCATaGACCGTGCCTGGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSALFPS*TVPGAP
Trigger: GGGGGCTCCAGGCACGGTCAATGAAGGAAACAGTGC...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCTGGGCCTCCTGCCCTaGCCCTGGTTCCGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPLGLLP*PWFRFP
Trigger: AGGAAACCGGAACCAGGGCAAGGGCAGGAGGCCCAG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTAGTTCACTGTGCTCTTaGATCAAGAGTCACCACGGC +
Preference number: 3 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPSSLCS*IKSHHG
Trigger: GCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACT...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCTGCTGTCCTTCATCTaGTACCAGTTACAAATATAT +
Preference number: 3 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAALLSFI*YQLQIY
Trigger: ATATATTTGTAACTGGTACAAGATGAAGGACAGCAG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp TCCCTCCAAGAGACAGGGACTGAGCTTGGGAAGACGTaGTCCAGGGGCTCTCCCAATCGGGGCGCATTCTTT +
Preference number: 3 (lower is better)
Translates to: SLQETGTELGKT*SRGSPNRGAFF
Trigger: AAAGAATGCGCCCCGATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp CCACCGATGCGCAGGCCGGGGCCGTCTGAAAGGTGCTaGCTGTTTCAATCTAGGGGTATAATGGCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: PPMRRPGPSERC*LFQSRGIMAQD
Trigger: GTCCTGAGCCATTATACCCCTAGATTGAAACAGTCAGCACCTTTCAGACGGCCCCGGCCTGCGCATCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GGTGCGTGGGAGATGCTCGGTCCGAGTGCACACACATaGATGGGAACATGTGCAGGAGTATGTGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GAWEMLGPSAHT*MGTCAGVCACV
Trigger: CACACACGCACATACTCCTGCACATGTTCCCATGCATGTGTGTGCACTCGGACCGAGCATCTCCCACGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CCA 72 bp GACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTaGGACAGACGATCCCAGATCCCCGGACACCCACAG +
Preference number: 3 (lower is better)
Translates to: DSLTVPNTLCPS*DRRSQIPGHPQ
Trigger: CTGTGGGTGTCCGGGGATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp AAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTaGTCAAGAGTCACCACGGCCCCTCGGAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: KGDSEGTVHCAL*SRVTTAPRSLV
Trigger: CACCAGGCTCCGAGGGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp AATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTaGCCCGGCTCAAGTCCACCCAAGGGGAAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: NAERSQKKRSSP*PGSSPPKGKGP
Trigger: AGGCCCTTTCCCCTTGGGTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GAGCTCTGGATTCGGAATCCAGGGCCCCTGGGAAGATaGGGATGCGGACGAAGACCCAAAAACCAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: ELWIRNPGPLGR*GCGRRPKNQKE
Trigger: TTCCTTCTGGTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCCGAATCCAGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GTTTCCGAGGCTGTGAGCCCTGTTCTAGATCACACCTaGACTCCCCAGCTCCGGAAGCTTGACCTGAATCGT +
Preference number: 3 (lower is better)
Translates to: VSEAVSPVLDHT*TPQLRKLDLNR
Trigger: ACGATTCAGGTCAAGCTTCCGGAGCTGGGGAGTGCAGGTGTGATCTAGAACAGGGCTCACAGCCTCGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp GTCTCCCAAAGTACCGGGCTTATAGGTGCGAACCACTaGCTGGACAGAGCCGCCTTCTGTAAAACACTCACC +
Preference number: 3 (lower is better)
Translates to: VSQSTGLIGANH*LDRAAFCKTLT
Trigger: GGTGAGTGTTTTACAGAAGGCGGCTCTGTCCAGGCAGTGGTTCGCACCTATAAGCCCGGTACTTTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACAGTTCACTGTGCTCTTaGATCAAGAGTCACCACGGC +
Preference number: 3 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHSSLCS*IKSHHG
Trigger: GCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACT...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp ACTCGCTGGGCTCAAGAAGACAGAGGTTCATGGGAATaGAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: TRWAQEDRGSWE*RAQSKEAKFSL
Trigger: CAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCATGAACCTCTGTCTTCTTGAGCCCAGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR-3UTR CAA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGCTGCTGTCCTTCATCTaGTACCAGTTACAAATATAT +
Preference number: 3 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMLLSFI*YQLQIY
Trigger: ATATATTTGTAACTGGTACAAGATGAAGGACAGCAG...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR GCA 72 bp CTGGGGAACGGGGGCTCTGAACTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACCAGTTACAAATATATC +
Preference number: 3 (lower is better)
Translates to: LGNGGSELGMES*CPSSCTSYKYI
Trigger: GATATATTTGTAACTGGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAGTTCAGAGCCCCCGTTCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR TCA 72 bp TATTACTATAAATATACAGTAAAAACGAACCAACGATaGGCCCATCTGAGCACATCAGACGGCAGCACATGG +
Preference number: 3 (lower is better)
Translates to: YYYKYTVKTNQR*AHLSTSDGSTW
Trigger: CCATGTGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTTGGTTCGTTTTTACTGTATATTTATAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAGCGGAGGCCACACGTaGGCAGCCCCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGSGGHT*AAPAPA
Trigger: GGCTGGGGCTGGGGCTGCCCACGTGTGGCCTCCGCT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAGGTGGGGCTGGTGGTaGCGAGGCCGTGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGRWGWW*RGRGPS
Trigger: AGACGGCCCACGGCCTCGCCACCACCAGCCCCACCT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGAGCGGAGGCCACACGTaGGCAGCCCCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWSGGHT*AAPAPA
Trigger: GGCTGGGGCTGGGGCTGCCCACGTGTGGCCTCCGCT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGGCGCTGTCCCCAGATaGGTCTGGCGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGGAVPR*VWRPWG
Trigger: GCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCC...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAGPGRG*RTRGTG
Trigger: CCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGGGAGCGGCCCTGGGTaGGAACAAGCCCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGGSGPG*EQARAQ
Trigger: CTGAGCACGGGCTTGTTCTCACCCAGGGCCGCTCCC...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
73% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGGCACCTTCCACCGATaGGCAGGCCGGGGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVGTFHR*AGRGRL
Trigger: CAGACGGCCCCGGCCTGCGCATCGGTGGAAGGTGCC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGCCCAGACTGTGGCCTaGACGACGCCGCCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRAQTVA*TTPPGA
Trigger: AGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCACCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSAPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTCTGCGCCACCCAGTaGGGGAGGGGCGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGLCATQ*GRGVHV
Trigger: GACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCTCAGCTCGGCGGCGCTaGGATCGGGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAASARRR*DRGWGH
Trigger: GTGGCCCCAGCCCCGATCCCAGCGCCGCCGAGCTGA...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCGGCCCCTCGGAGCCTaGTGGCCACAGGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRRPLGA*WPQGAC
Trigger: GCATGCCCCCTGTGGCCACCAGGCTCCGAGGGGCCG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCACGGCCCCTCGGAGCCTaGTGGCCACAGGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSARPLGA*WPQGAC
Trigger: GCATGCCCCCTGTGGCCACCAGGCTCCGAGGGGCCG...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGTCCCCAGATGGGTCTaGCGTCCCTGGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGVPRWV*RPWGLG
Trigger: GCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGAC...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGCGTGGGCCGTCTCCATaGAGGTGGGCCGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGRGPSP*RWAVLQ
Trigger: CTGCAGGACGGCCCACCTCCATGGAGACGGCCCACG...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCCGCGATGCGGCGGCTaGGAATGGAGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGPRCGG*EWSPWC
Trigger: GCACCATGGGCTCCATTCTCAGCCGCCGCATCGCGG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCCAGGCCGCCACAGTaGCACGCAGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAARPPQ*HAGWVD
Trigger: GTCCACCCACCCTGCGTGTCACTGTGGCGGCCTGGC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGCCAGGCCGCCACAGTaGCACGCAGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRARPPQ*HAGWVD
Trigger: GTCCACCCACCCTGCGTGTCACTGTGGCGGCCTGGC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGCCAGGCCGCCACAGTaGCACGCAGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPARPPQ*HAGWVD
Trigger: GTCCACCCACCCTGCGTGTCACTGTGGCGGCCTGGC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCGCACCGCCCGGATCTaGAGGAGGGCCCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGRTARI*RRARKG
Trigger: GCCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCACGCACCGCCCGGATCTaGAGGAGGGCCCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSARTARI*RRARKG
Trigger: GCCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCG...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGTGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGCCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGTGGCCACAGGGGGCATaGAGACAGGAGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGWPQGA*RQEAGS
Trigger: TGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCA...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCCCAGGGCGGCACCCATaGACCCCAAGGCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPPGRHP*TPRPRA
Trigger: TGCTCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGG...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCAGACTGTGGCCTaGACGACGCCGCCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAAQTVA*TTPPGA
Trigger: AGCGCCCGGCGGCGTCGTGCAGGCCACAGTCTGGGC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAGGGTCACACTCGGATaGCTGGTGCCACGCCACCCG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGRVTLG*LVPRHP
Trigger: CGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACGTGGGCCGTCTCCATaGAGGTGGGCCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPRGPSP*RWAVLA
Trigger: TGCCAGGACGGCCCACCTCCATGGAGACGGCCCACG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262370.12
CDS-3UTR CCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAGGTGGGGCTGGTGGTaGCGAGGCCGTGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSARWGWW*RGRGPS
Trigger: AGACGGCCCACGGCCTCGCCACCACCAGCCCCACCT...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCGCTGGGATCGGGGCTaGGGCCACCAAGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCARWDRG*GHQVEA
Trigger: GGCCTCCACTTGGTGGCCCCAGCCCCGATCCCAGCG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCGCTGGGATCGGGGCTaGGGCCACCAAGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRRWDRG*GHQVEA
Trigger: GGCCTCCACTTGGTGGCCCCAGCCCCGATCCCAGCG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGTGGGGAGCGGCCCTaGGTGAGAACAAGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGGERP*VRTSPC
Trigger: GCACGGGCTTGTTCTCACCCAGGGCCGCTCCCCACC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCTGGCAGTAGATGGTaGTGGCCACGCGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPGSRW*WPRGHR
Trigger: CCGATGCCCGCGTGGCCATCACCATCTACTGCCAGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCACCAGGGAGGGCACTaGGGCCGCGCAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAHQGGH*GRANTA
Trigger: TGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGGTG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGACTGGGAGGGACAGGTaGGTCGGCAGCAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWTGRDR*VGSSGL
Trigger: GAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCGCACCGCCCGGATCTaGAGGAGGGCCCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGRTARI*RRARKG
Trigger: GCCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPCSAA*PSGGCC
Trigger: ACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGTGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGCCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGGGCCTCGGCCACAGTaGTCGGGGCTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAGPRPQ*SGLLSC
Trigger: GCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSAEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGTGCTGGAAGCAGCTGTaGCTCCGCCCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGCWKQL*LRPSAR
Trigger: CCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCA...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCCAGCGGGCCACTCTaGGGCCCGAACTTCACGCAA +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPSGPL*GPNFTQ
Trigger: TTGCGTGAAGTTCGGGCCGCAGAGTGGCCCGCTGGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGGGCCTCTTAGAGCCTaGACCCCCGGCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAGPLRA*TPGQAP
Trigger: AGGTGCCTGGCCGGGGGTGCAGGCTCTAAGAGGCCC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGCATGGCCTCAGGGCTaGCTGACACCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPAWPQG*LTPSHQ
Trigger: CTGGTGGCTGGGTGTCAGGCAGCCCTGAGGCCATGC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGGGGGACAGGGCTCCTaGCTTCTTCCGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAGGQGS*LLPHRP
Trigger: CGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCTCTGCGCCACCCAGTaGGGGAGGGGCGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGLCATQ*GRGVHV
Trigger: GACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGCTGGGGCCACCAAGTaGAGGCCAGGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRAGATK*RPGGAG
Trigger: ACCAGCCCCACCTGGCCTCCACTTGGTGGCCCCAGC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACGCTGGGATCGGGGCTaGGGCCACCAAGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGARWDRG*GHQVEA
Trigger: GGCCTCCACTTGGTGGCCCCAGCCCCGATCCCAGCG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAATCAGCTCGGCGGCGCTaGGATCGGGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKSARRR*DRGWGH
Trigger: GTGGCCCCAGCCCCGATCCCAGCGCCGCCGAGCTGA...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCCACCAGGTCCTCCCTaGCAGGGGCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGPPGPP*QGPAKQ
Trigger: CTGTTTGGCAGGCCCCTGCCAGGGAGGACCTGGTGG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGGGTGGATCCAGCCCTaGGTCACCAGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAGWIQP*VTRPRH
Trigger: GTGCCTGGGCCTGGTGACCCAGGGCTGGATCCACCC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGAGAGGTGCTTGGGGTaGGGTAGAGGTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGERCLG*GRGAWE
Trigger: CTCCCACGCACCTCTACCCCACCCCAAGCACCTCTC...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGTCCCCAGATGGGTCTaGCGTCCCTGGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAVPRWV*RPWGLG
Trigger: GCCCAAGCCCCAGGGACGCCAGACCCATCTGGGGAC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACCGCGATGCGGCGGCTaGGAATGGAGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAPRCGG*EWSPWC
Trigger: GCACCATGGGCTCCATTCTCAGCCGCCGCATCGCGG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ATGGCCGGGGAGACAGCCCGGAGGCCGTTGAGCGCCTCGAGCAGCGAGATGGGCCCTGGCAGTAGATGGTaGTGGCCACGCGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: MAGETARRPLSASSSEMGPGSRW*WPRGHR
Trigger: CCGATGCCCGCGTGGCCATCACCATCTACTGCCAGG...GCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGTCTCCCCGGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQGPGRG*RTRGTG
Trigger: CCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCC...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPGPGRG*RTRGTG
Trigger: CCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCC...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCACTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSALLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTTGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCACSEPP*ASGRVL
Trigger: CAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCA...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAGAGCAGGTGGCTGTGTaGGCGGACGCCCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSAEQVAV*ADALRT
Trigger: TGTCCTGAGGGCGTCCGCTCACACAGCCACCTGCTC...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGACTGGGAGGGACAGGTaGGTCGGCAGCAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRTGRDR*VGSSGL
Trigger: GAGCCCACTGCTGCCGACTCACCTGTCCCTCCCAGT...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGAGGGCAGGGAGAACTaGTGGCTCACCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGEGREN*WLTPLL
Trigger: CAAGAGAGGGGTGAGCCAGCAGTTCTCCCTGCCCTC...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGTGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGCCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGAGCCGAGGGCTCCATaGTGCCAGCTCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAEPRAP*CQLGQA
Trigger: AGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCCAGGGCGGCACCCATaGACCCCAAGGCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSPGRHP*TPRPRA
Trigger: TGCTCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATGCTGGAAGCAGCTGTaGCTCCGCCCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGACWKQL*LRPSAR
Trigger: CCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCATCCCTGGCAGGGGCCTaGCAAACAGAAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPSLAGA*QTEAPA
Trigger: TGCAGGGGCTTCTGTTTGGCAGGCCCCTGCCAGGGA...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGGTTCCCTCCACGGTaGTGCCCTCATCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWGFPPR*CPHPSS
Trigger: GCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCACCTCCCAGCAGGCTaGATGGGCCTCGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAHLPAG*MGLGRP
Trigger: TGGTCTGCCGAGGCCCATGCAGCCTGCTGGGAGGTG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGCATGGCCTCAGGGCTaGCTGACACCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAAWPQG*LTPSHQ
Trigger: CTGGTGGCTGGGTGTCAGGCAGCCCTGAGGCCATGC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCACTCGGATGCCTGGTaGCACGCCACCCGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRHSDAW*HATRSY
Trigger: GTAGGAGCGGGTGGCGTGGCACCAGGCATCCGAGTG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGTCCTCACGCGGACATaGCCCGGACCAGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKVLTRT*PGPGRT
Trigger: CGTGCGGCCTGGTCCGGGCCATGTCCGCGTGAGGAC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGTACAGAGGCACAGGTaGCGGCAGGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWVQRHR*RQGRIS
Trigger: GCTGATCCTGCCCTGCCGCCACCTGTGCCTCTGTAC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTTTCCCGCAGGGCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCGTACAGAGGCACAGGTaGCGGCAGGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LSRRASSAPPSGGGASTSVQRHR*RQGRIS
Trigger: GCTGATCCTGCCCTGCCGCCACCTGTGCCTCTGTAC...GGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGCCCTGCGGGAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GAGGCCGTTGAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTGGGACGCTCTCTGCGCCACCCAGTaGGGGAGGGGCGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: EAVERLEQRDGLVARWDALCATQ*GRGVHV
Trigger: GACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAG...AGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGTGGTGGCGAGGCCGTaGGCCGTCTCCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGVVARP*AVSMEV
Trigger: CACCTCCATGGAGACGGCCCACGGCCTCGCCACCAC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACGCTGGGATCGGGGCTaGGGCCACCAAGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKRWDRG*GHQVEA
Trigger: GGCCTCCACTTGGTGGCCCCAGCCCCGATCCCAGCG...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCAGCCCACAGGACCCTaGGGAACGGGGGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGQPTGP*GTGALN
Trigger: GTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCAGCCCACAGGACCCTaGGGAACGGGGGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRQPTGP*GTGALN
Trigger: GTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGTCGGGCCCCAGGGCTaGCAGGTAGATGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGVGPQG*QVDVSR
Trigger: CCTGCTGACATCTACCTGCCAGCCCTGGGGCCCGAC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTTGGGCAATGGTGCTaGTGCAGAGCCTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGLGQWC*CRAWDG
Trigger: CCCGTCCCAGGCTCTGCACCAGCACCATTGCCCAAG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGGCGTCCCTGGGGCTTaGGCAATGGTGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPGVPGA*AMVLVQ
Trigger: CTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCATGGGTCTGGCGTCCCTaGGGCTTGGGCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPWVWRP*GLGNGA
Trigger: AGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCA...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCCGTCTCCATGGAGGTaGGCCGTCCTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAPSPWR*AVLQVG
Trigger: TCCCACCTGCAGGACGGCCCACCTCCATGGAGACGG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCGTCTCCATGGAGGTaGGCCGTCCGGCTTACTCGT +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPSPWR*AVRLTR
Trigger: ACGAGTAAGCCGGACGGCCCACCTCCATGGAGACGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586183.5
CDS-3UTR TCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCCAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCACCAGGGAGGGCACTaGGGCCGCGCAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSHQGGH*GRANTA
Trigger: TGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGGTG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTGGCCCAGCACCGGGCTaGGACACTCTAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAGPAPG*DTLAAQ
Trigger: CTGGGCAGCTAGAGTGTCTCAGCCCGGTGCTGGGCC...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCTCTGGCACCAGGACTaGTGGCCAGAGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPALWHQD*WPEAGA
Trigger: GGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGACTGGACCGGGCGGCTaGCCAGGAAGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGTGPGG*PGSSDP
Trigger: TGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGT...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGAGGGCAGGGAGAACTaGTGGCTCACCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPEGREN*WLTPLL
Trigger: CAAGAGAGGGGTGAGCCAGCAGTTCTCCCTGCCCTC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGAGGGCAGGGAGAACTaGTGGCTCACCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWEGREN*WLTPLL
Trigger: CAAGAGAGGGGTGAGCCAGCAGTTCTCCCTGCCCTC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSPCSAA*PSGGCC
Trigger: ACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAPCSAA*PSGGCC
Trigger: ACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGACCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGCTGCTCGGGTCCCTTaGTGTGGTGACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPAARVP*CGDDDS
Trigger: TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCAAATCAGAGAGAACTaGAAGGGGGCCGGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGQIREN*KGAGRG
Trigger: TCCGCGCCCGGCCCCCTTGCAGTTCTCTCTGATTTG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTTGGGCCTCCTGCCCTTaGCCTGGTTCCGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAWASCP*PGSGFL
Trigger: CAGGAAACCGGAACCAGGGCAAGGGCAGGAGGCCCA...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCACCCACAGCAGATCTaGAGCCCCGAGTCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAHPQQI*SPESER
Trigger: GCGCTCTGACTCGGGGCTGCAGATCTGCTGTGGGTG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGTAGCGAGGGGCTCTTaGGGCTGTATACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWVARGS*GCILPC
Trigger: GCAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTAC...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAAAKST*AWPVTS
Trigger: GGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRAAKST*AWPVTS
Trigger: GGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGTACAGAGGCACAGGTaGCGGCAGGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAVQRHR*RQGRIS
Trigger: GCTGATCCTGCCCTGCCGCCACCTGTGCCTCTGTAC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGTACAGAGGCACAGGTaGCGGCAGGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAVQRHR*RQGRIS
Trigger: GCTGATCCTGCCCTGCCGCCACCTGTGCCTCTGTAC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGAGACAGCCCGGAGGCCGTTGAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: GDSPEAVERLEQRDGLVARGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...GGCTACGAGCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWLLSRM*SIAARG
Trigger: TCCCCTCGCGGCTATCGACCACATCCTGGACAGCAG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGACGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCTCTGCGCCACCCAGTaGGGGAGGGGCGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQLCATQ*GRGVHV
Trigger: GACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGGAGGTGGGCCGTCCTaGCAGGTAGATGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGGGGPS*QVDVSR
Trigger: CCTGCTGACATCTACCTGCCAGGACGGCCCACCTCC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262370.12
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGTGGTGGCGAGGCCGTaGGCCGTCTCCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSVVARP*AVSMEV
Trigger: CACCTCCATGGAGACGGCCCACGGCCTCGCCACCAC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTGTGGTGGCGAGGCCGTaGGCCGTCTCCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSVVARP*AVSMEV
Trigger: CACCTCCATGGAGACGGCCCACGGCCTCGCCACCAC...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGCTGGGGCCACCAAGTaGAGGCCAGGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSAGATK*RPGGAG
Trigger: ACCAGCCCCACCTGGCCTCCACTTGGTGGCCCCAGC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGCCAGGCTCTCAGAGTaGGGTCAGCTCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKARLSE*GQLGGA
Trigger: AGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCCCCTCGGCAAAGTCTaGGGAGCCGAGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGPLGKV*GAEGSM
Trigger: CATGGAGCCCTCGGCTCCCCAGACTTTGCCGAGGGG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCGGCCCCTCGGAGCCTaGTGGCCACAGGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPRPLGA*WPQGAC
Trigger: GCATGCCCCCTGTGGCCACCAGGCTCCGAGGGGCCG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCATGCTGTCCACTGCTaGGTCTCGCCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSHAVHC*VSPRRR
Trigger: CCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGTGGGGTAGAGGTGCGTaGGAGATGCTCGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWWGRGA*EMLGPS
Trigger: ACTCGGACCGAGCATCTCCCACGCACCTCTACCCCA...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGAGAGGTGCTTGGGGTaGGGTAGAGGTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAERCLG*GRGAWE
Trigger: CTCCCACGCACCTCTACCCCACCCCAAGCACCTCTC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCACCCCATGTCTCCCTaGGGTTCCCTCCACGGTGCT +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAHPMSP*GSLHGA
Trigger: AGCACCGTGGAGGGAACCCCAGGGAGACATGGGGTG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAGGTCTCAGGCTGGAGTaGGTGGGTGGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPGLRLE*VGGCVC
Trigger: ACACACACACCCACCCACCCACTCCAGCCTGAGACC...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCTTGGGCAATGGTGCTaGTGCAGAGCCTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAALGQWC*CRAWDG
Trigger: CCCGTCCCAGGCTCTGCACCAGCACCATTGCCCAAG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACGGTTTCCTGGGATGTaGCCAGCCACTGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPRFPGM*PATVLP
Trigger: TGGCAGGACAGTGGCTGGCCACATCCCAGGAAACCG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGCTCCTGCCCTTGCCCTaGTTCCGGTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVLLPLP*FRFPGM
Trigger: CATCCCAGGAAACCGGAACCAGGGCAAGGGCAGGAG...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCGTGGGCCGTCTCCATaGAGGTGGGCCGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSRGPSP*RWAVRL
Trigger: AAGCCGGACGGCCCACCTCCATGGAGACGGCCCACG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586183.5
CDS-3UTR TCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCCTGGCAGTAGATGGTaGTGGCCACGCGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSPGSRW*WPRGHR
Trigger: CCGATGCCCGCGTGGCCATCACCATCTACTGCCAGG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCACCACAGCCTGGATaGCTACTGGAAACACGCCCC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAPPQPG*LLETRP
Trigger: GGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGGGGAACGGGGGCTCTaGACTAGGGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPGERGL*TRDGKL
Trigger: CAGCTTTCCATCCCTAGTTCAGAGCCCCCGTTCCCC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGCAGGGAGCTGGGTGTaGGGACCATGCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGAGSWV*GPCCPL
Trigger: CAGTGGACAGCATGGTCCTCACACCCAGCTCCCTGC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCCACGGTGGCCATGCTaGCAAGGGAAGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSPRWPC*QGKEGA
Trigger: CGCTCCCTCCTTCCCTTGTCAGCATGGCCACCGTGG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCAAGCGAAGTTCTCCCTaGCCCGGCTCAAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAKRSSP*PGSSPP
Trigger: GGGTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCAGGCCGGGGCCGTCTaGAAGGTGCTGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAQAGAV*KVLTVS
Trigger: TGAAACAGTCAGCACCTTTCAGACGGCCCCGGCCTG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGGGGAGCGGCCCTGGGTaGGAACAAGCCCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQGSGPG*EQARAQ
Trigger: CTGAGCACGGGCTTGTTCTCACCCAGGGCCGCTCCC...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGTGCCCTTCTGGCGGCTaGTGTCCAGGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGCPSGG*CPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCA...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGGCCGGGGAGACAGCCCGGAGGCCGTTGAGCGCCTCGAGCAGCGAGATGGGCTGCCCTTCTGGCGGCTaGTGTCCAGGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: MAGETARRPLSASSSEMGCPSGG*CPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCA...GCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGTCTCCCCGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGACCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AAAVQDVVDSREGTAGLGPCSAA*PSGGCC
Trigger: ACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGG...TCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCAACTCTCAGGGGAGCTaGTTTCCCGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAANSQGS*FPAGPA
Trigger: AGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCAACTCTCAGGGGAGCTaGTTTCCCGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASSAPPSGGGASTSSESFNSQGS*FPAGPA
Trigger: AGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT...GAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACTCTCAGGGGAGCTaGTTTCCCGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSANSQGS*FPAGPA
Trigger: AGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGCTGCTCGGGTCCCTTaGTGTGGTGACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAAARVP*CGDDDS
Trigger: TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTGGCCACAGGGGGCATaGAGACAGGAGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSWPQGA*RQEAGS
Trigger: TGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCAGGGACCGCACTGTTaGAGGAGCAGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSQGPHC*RSRQSQ
Trigger: CTGGCTCTGCCTGCTCCTGCAACAGTGCGGTCCCTG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCAAACAGAAGCCCCTaGACCTGGAGGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRPNRSP*TWRGLV
Trigger: CACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGGAGGTGCGTGGGAGATaGTCGGTCCGAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGEVRGR*SVRVHT
Trigger: TGTGTGCACTCGGACCGAGCATCTCCCACGCACCTC...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCTGCTGCAGGACCGATaGGAACTCATGGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWLLQDR*ELMVGP
Trigger: TGGTCCCACCATGAGTTCGCATCGGTCCTGCAGCAG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGGCACCTTCCACCGATaGGCAGGCCGGGGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELGTFHR*AGRGRL
Trigger: CAGACGGCCCCGGCCTGCGCATCGGTGGAAGGTGCC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCCCCCCGGATGGCTACTaGAAGGCAAAGAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPPPDGY*KAKRGA
Trigger: GGCTCCTCTCTTTGCCTTGCAGTAGCCATCCGGGGG...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
68% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCACCCACAGCAGATCTaGAGCCCCGAGTCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSHPQQI*SPESER
Trigger: GCGCTCTGACTCGGGGCTGCAGATCTGCTGTGGGTG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGTCCTCACGCGGACATaGCCCGGACCAGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELVLTRT*PGPGRT
Trigger: CGTGCGGCCTGGTCCGGGCCATGTCCGCGTGAGGAC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATGTCGCCGTCCTCGGTaGGGCTGTCGGCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGACRRPR*GCRHRL
Trigger: AAGACGATGCCGACAGCCCCACCGAGGACGGCGACA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp ATGGCCGGGGAGACAGCCCGGAGGCCGTTGAGCGCCTCGAGCAGCGAGATGGGCGTAGCGAGGGGCTCTTaGGGCTGTATACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MAGETARRPLSASSSEMGVARGS*GCILPC
Trigger: GCAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTAC...GCCCATCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGTCTCCCCGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGTAGCGAGGGGCTCTTaGGGCTGTATACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAVARGS*GCILPC
Trigger: GCAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTAC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GGLALRPALLAAAVQDVVAAKST*AWPVTS
Trigger: GGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGC...GACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGTACAGAGGCACAGGTaGCGGCAGGGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAVQRHR*RQGRIS
Trigger: GCTGATCCTGCCCTGCCGCCACCTGTGCCTCTGTAC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKRGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRLLSRM*SIAARG
Trigger: TCCCCTCGCGGCTATCGACCACATCCTGGACAGCAG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRECGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALRPALLAAAVQDVVDSRCGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...GCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSCGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTA +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPHPLRG*GKTGTV
Trigger: TACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWSSSSS*MGEDGD
Trigger: GTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGA...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGTAGATGTCAGCAGGTaGGCCTCGGCCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPVDVSR*ASATVL
Trigger: GAGCACTGTGGCCGAGGCCCACCTGCTGACATCTAC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGCGGCCCCTCGGAGCCTaGTGGCCACAGGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRPLGA*WPQGAC
Trigger: GCATGCCCCCTGTGGCCACCAGGCTCCGAGGGGCCG...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGAGCGGAGGCCACACGTaGGCAGCCCCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLSGGHT*AAPAPA
Trigger: GGCTGGGGCTGGGGCTGCCCACGTGTGGCCTCCGCT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCCACCAGGTCCTCCCTaGCAGGGGCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKPPGPP*QGPAKQ
Trigger: CTGTTTGGCAGGCCCCTGCCAGGGAGGACCTGGTGG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCATGCTGTCCACTGCTaGGTCTCGCCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREHAVHC*VSPRRR
Trigger: CCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTGTCGGGCCCCAGGGCTaGCAGGTAGATGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSVGPQG*QVDVSR
Trigger: CCTGCTGACATCTACCTGCCAGCCCTGGGGCCCGAC...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCCCGAAGCGCGTCTaGGAGGTCACGTACCGGCTT +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAPPKRV*EVTYRL
Trigger: AAGCCGGTACGTGACCTCCCAGACGCGCTTCGGGGG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSGIQGP*EDADAD
Trigger: GTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCC...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGAGATGGAGAGACCTCTaGCCCCGAAAGTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWRWRDL*PRKSGP
Trigger: GGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACCAGGCCTCTCCCCTTaGGACGCTCACCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAPGLSP*DAHPMS
Trigger: AGACATGGGGTGAGCGTCCCAAGGGGAGAGGCCTGG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGAGCGGGGGAGCAGGTaGCTGTGTGAGCGGACGCCC +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELERGSR*LCERTP
Trigger: GGGCGTCCGCTCACACAGCCACCTGCTCCCCCGCTC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTGGCGTCCCTGGGGCTTaGGCAATGGTGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAGVPGA*AMVLVQ
Trigger: CTGCACCAGCACCATTGCCCAAGCCCCAGGGACGCC...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCGACACGGCACCGCGGTaGATGCCCTCTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPDTAPR*MPSGPP
Trigger: AGGAGGCCCAGAGGGCATCCACCGCGGTGCCGTGTC...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTCCGCGATGCGGCGGCTaGGAATGGAGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELPRCGG*EWSPWC
Trigger: GCACCATGGGCTCCATTCTCAGCCGCCGCATCGCGG...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCCTGGCAGTAGATGGTaGTGGCCACGCGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQPGSRW*WPRGHR
Trigger: CCGATGCCCGCGTGGCCATCACCATCTACTGCCAGG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCATCTGCGTGCCTGTGCACGAGCGGGAGGGGTGGCTGGCCTGGGTGTGCAGGGCCTGCAGGAGGTAGCTaGCCCGGTCCACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: ASACLCTSGRGGWPGCAGPAGGS*PGPQFA
Trigger: AGCAAATTGTGGACCGGGTCAGCTACCTCCTGCAGG...CCCTGCACACCCAGGCCAGCCACCCCTCCCGCTCGTGCACAGGCACGCAGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCCCTGCAGGAGGTAGCTaGCCCGGTCCACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPPAGGS*PGPQFA
Trigger: AGCAAATTGTGGACCGGGTCAGCTACCTCCTGCAGG...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGACAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGCCCCTGAACATCTGTaGAGATGGTGCTTCGACCAC +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVAPEHL*RWCFDH
Trigger: GTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAATGGCAAAAGAGAATaGGGAGGCCACCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGNGKRE*GGHQVL
Trigger: GAGGACCTGGTGGCCTCCTCATTCTCTTTTGCCATT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGCAGTGACCCGAGATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGAVTRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATCTCGGGTCACTGC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCAGTGACCCGAGATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAAVTRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATCTCGGGTCACTGC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGAGCTTGGGAAGACGTaGTCCAGGGGCTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAELGKT*SRGSPN
Trigger: ATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTC...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTGAGGGCAGGGAGAACTaGTGGCTCACCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RGPCSAACPSGGCCPGCGEGREN*WLTPLL
Trigger: CAAGAGAGGGGTGAGCCAGCAGTTCTCCCTGCCCTC...ACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCGCACCGCCCGGATCTaGAGGAGGGCCCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPRTARI*RRARKG
Trigger: GCCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCT +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAHSARG*CPAGHS
Trigger: AGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGGGCCTCGGCCACAGTaGTCGGGGCTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPGPRPQ*SGLLSC
Trigger: GCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACAGGGACCGCACTGTTaGAGGAGCAGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKQGPHC*RSRQSQ
Trigger: CTGGCTCTGCCTGCTCCTGCAACAGTGCGGTCCCTG...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGACTCCCTTTGCCATCTaGGGCCCAGGAGGTTTACCT +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGTPFAI*GPGGLP
Trigger: AGGTAAACCTCCTGGGCCGCAGATGGCAAAGGGAGT...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGAGGTGCGTGGGAGATaGTCGGTCCGAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGEVRGR*SVRVHT
Trigger: TGTGTGCACTCGGACCGAGCATCTCCCACGCACCTC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCCCAGCGGGCCACTCTaGGGCCCGAACTTCACGCAA +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQPSGPL*GPNFTQ
Trigger: TTGCGTGAAGTTCGGGCCGCAGAGTGGCCCGCTGGG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGGGCCCCTGGGAAGATaGGGATGCGGACGAAGACCC +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGGPLGR*GCGRRP
Trigger: GGGTCTTCGTCCGCATCCGCATCTTCCCAGGGGCCC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAHPSSS*LPQWTV
Trigger: CACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCTGCTGCAGGACCGATaGGAACTCATGGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAALLQDR*ELMVGP
Trigger: TGGTCCCACCATGAGTTCGCATCGGTCCTGCAGCAG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTACCGGGCTTATAGGTaGGAACCACTGCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVYRAYR*EPLPGQ
Trigger: CTGTCCAGGCAGTGGTTCGCACCTATAAGCCCGGTA...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTTGGCACTCCTGGAGCTaGCTTCTCTCTCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGWHSWS*LLSLPR
Trigger: ACGGGGGAGAGAGAGAAGGCAGCTCCAGGAGTGCCA...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGGGCAATGGTGCTGGTaGAGAGCCTGGGACGGGGCC +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELGQWCW*RAWDGA
Trigger: GGCCCCGTCCCAGGCTCTGCACCAGCACCATTGCCC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGGGCTTGGGCAATGGTaGTGGTGCAGAGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKGLGQW*WCRAWD
Trigger: GTCCCAGGCTCTGCACCAGCACCATTGCCCAAGCCC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCACAGAGCCCCAATaGCCAGACTGTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAPTEPQ*PDCGLH
Trigger: GTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACGGCACCGCGGTGGATaGCCTCTGGGCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVARHRGG*PLGLLP
Trigger: GGGCAGGAGGCCCAGAGGGCATCCACCGCGGTGCCG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGAGGGTCACACTCGGATaGCTGGTGCCACGCCACCCG +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQRVTLG*LVPRHP
Trigger: CGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCT...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAASLDDY*KHAPVQ
Trigger: CTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGAGCACGTGGGCGTaGCCAGTCACTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSAKSTWA*PVTSTT
Trigger: TGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTT...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCAAGAGCACGTGGGCGTaGCCAGTCACTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAKSTWA*PVTSTT
Trigger: TGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSAAKST*AWPVTS
Trigger: GGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACGTCGTCCGAGGGCTTaGTCTCCTGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPRRPRA*SPGCSC
Trigger: ACAAGAACAACCAGGAGACCAAGCCCTCGGACGACG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGGGAAGACCGCGAGGGGACAGCTaGCCTGGGACAGGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: GVHVLGELLLILFVDGGRPRGDS*PGTGRP
Trigger: CGGACGGCCTGTCCCAGGCCAGCTGTCCCCTCGCGG...TCTTCCCCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAHPLRG*GKTGTV
Trigger: TACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPSSSSS*MGEDGD
Trigger: GTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGA...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGTAGATGTCAGCAGGTaGGCCTCGGCCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGVDVSR*ASATVL
Trigger: GAGCACTGTGGCCGAGGCCCACCTGCTGACATCTAC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCGGAGGTGGGCCGTCCTaGCAGGTAGATGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALRPALLAAAVQDVVDSRGGGPS*QVDVSR
Trigger: CCTGCTGACATCTACCTGCCAGGACGGCCCACCTCC...GCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGAGGTGGGGCTGGTGGTaGCGAGGCCGTGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRWGWW*RGRGPS
Trigger: AGACGGCCCACGGCCTCGCCACCACCAGCCCCACCT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGCCAGGCTCTCAGAGTaGGGTCAGCTCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELARLSE*GQLGGA
Trigger: AGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGACACGCAGGGTGGGTaGACAGGCACTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAADTQGG*TGTVSF
Trigger: GAAGGAAACAGTGCCTGTCCACCCACCCTGCGTGTC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCCACCAGGTCCTCCCTaGCAGGGGCCTGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPPPGPP*QGPAKQ
Trigger: CTGTTTGGCAGGCCCCTGCCAGGGAGGACCTGGTGG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCAGGAGGCCACTTTCTaGGGGAAGGTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGQEATF*GKVQQP
Trigger: TGGCTGCTGCACCTTCCCCCAGAAAGTGGCCTCCTG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGAGGGCCCCTCAAGGCTaGAAGAAGAGCCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKRAPQG*KKSLTG
Trigger: GCCGGTCAGGCTCTTCTTCCAGCCTTGAGGGGCCCT...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAAGGGCCCCTCAAGGCTaGAAGAAGAGCCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKRAPQG*KKSLTG
Trigger: GCCGGTCAGGCTCTTCTTCCAGCCTTGAGGGGCCCT...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTGGCTCTGGCGCACCTaGGCTGTGTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREWLWRT*AVSVSL
Trigger: CAGGGAGACAGACACAGCCCAGGTGCGCCAGAGCCA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCTCCCGCAGTGGACAGTaGCTCTGGCGCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPSRSGQ*LWRTWA
Trigger: AGCCCAGGTGCGCCAGAGCCACTGTCCACTGCGGGA...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCTCCTGCCTCCCGCAGTaGACAGTGGCTCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPSCLPQ*TVALAH
Trigger: GTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGA...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCCAGGCCTCTCCCCTTaGGACGCTCACCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSPGLSP*DAHPMS
Trigger: AGACATGGGGTGAGCGTCCCAAGGGGAGAGGCCTGG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGTGAGTCGGCAGCAGTaGGCTCATGGCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAVSRQQ*AHGTKA
Trigger: TGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCAC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGAGAAGGTTCCAGTACTaGGAGGGACAGGTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWRRFQY*EGQVSR
Trigger: CCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGTGCGAACCACTGCCTaGACAGAGCCGCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPVRTTA*TEPPSV
Trigger: TACAGAAGGCGGCTCTGTCCAGGCAGTGGTTCGCAC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGGCGCTGTCCCCAGATaGGTCTGGCGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATGAVPR*VWRPWG
Trigger: GCCCCAGGGACGCCAGACCCATCTGGGGACAGCGCC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGAGAGTAGCCCCCGGATaGCTACTGCAAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGRVAPG*LLQGKE
Trigger: CTCTTTGCCTTGCAGTAGCCATCCGGGGGCTACTCT...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGACGCTGTGTCCCTCTTaGGACAGACGATCCCAGATC +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWTLCPS*DRRSQI
Trigger: GATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACACTCCCGCCGCCTGTaGCCACAACAGCATTCACTC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAHSRRL*PQQHSL
Trigger: GAGTGAATGCTGTTGTGGCCACAGGCGGCGGGAGTG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCGTGGGCCGTCTCCATaGAGGTGGGCCGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPRGPSP*RWAVLQ
Trigger: CTGCAGGACGGCCCACCTCCATGGAGACGGCCCACG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAGLVAR*DAVRVR
Trigger: TCTAACTCTGACAGCGTCCCACCTGGCTACGAGCCC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp GGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GGLALRPALLAAAVQDVVGLVAR*DAVRVA
Trigger: TGCAACTCTGACAGCGTCCCACCTGGCTACGAGCCC...GACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCCTGGCAGTAGATGGTaGTGGCCACGCGGGCATCGG +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPPGSRW*WPRGHR
Trigger: CCGATGCCCGCGTGGCCATCACCATCTACTGCCAGG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGCCGAGAAGTCAATCTTaGAGGAGGGCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWPRSQS*RRAGRT
Trigger: AGTTCTCCCTGCCCTCCTTCAAGATTGACTTCTCGG...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCACCACAGCCTGGATaGCTACTGGAAACACGCCCC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREPPQPG*LLETRP
Trigger: GGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCCACCACAGCCTGGATaGCTACTGGAAACACGCCCC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKPPQPG*LLETRP
Trigger: GGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCCTGCAGGAGGTAGCTaGCCCGGTCCACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: RGPCSAACPSGGCCPGCGPAGGS*PGPQFA
Trigger: AGCAAATTGTGGACCGGGTCAGCTACCTCCTGCAGG...ACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp GGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGGGAAGACAGCCCGGAGGCCGTTaGGCGCCTCGAGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GVHVLGELLLILFVDGGRQPGGR*APRAAR
Trigger: TCTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTG...TCTTCCCCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGGCAGTGACCCGAGATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREAVTRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATCTCGGGTCACTGC...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACACTCTGGCACCAGGACTaGTGGCCAGAGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATLWHQD*WPEAGA
Trigger: GGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAG...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTCCACGGTGGCCATGCTaGCAAGGGAAGGAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELPRWPC*QGKEGA
Trigger: CGCTCCCTCCTTCCCTTGTCAGCATGGCCACCGTGG...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGCATTCACTCAGATGTaGGCACACCAAGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSAFTQM*AHQGPG
Trigger: CCCGGGCCCTTGGTGTGCTCACATCTGAGTGAATGC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGACTGGACCGGGCGGCTaGCCAGGAAGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKTGPGG*PGSSDP
Trigger: TGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGT...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGAACTGGACCGGGCGGCTaGCCAGGAAGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: AAAVQDVVDSREGTAGLGTGPGG*PGSSDP
Trigger: TGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGT...TCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCAGGAACTCCTCCGATaGCTGGCAGTAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGQELLR*LAVDGD
Trigger: ATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTG...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGGCTGTATACTGCCCTaGCGTTCAGGAACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGGCILP*RSGTPP
Trigger: CGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGCAGGGCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGACACCACACACTCGTTaGTGTTGTCGCTGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RRASSAPPSGGGASTSSETPHTR*CCRCSR
Trigger: ACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGT...CTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGCCCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTGCCCTTCTGGCGGCTaGTGTCCAGGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPACPSGG*CPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTTGCCCTTCTGGCGGCTaGTGTCCAGGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSCPSGG*CPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCA...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATGCTGCTCGGGTCCCTTaGTGTGGTGACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LRHPVGEGRPRPRRASPHAARVP*CGDDDS
Trigger: TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC...ATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGATTCTCAATGGAAGCTaGTCGGGTCCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGQALRVGSARRRWDRGWILNGS*SGPLLW
Trigger: CCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAAT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCT +
Preference number: 4 (lower is better)
Translates to: RGPCSAACPSGGCCPGCGHSARG*CPAGHS
Trigger: AGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTG...ACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACGGGCCTCGGCCACAGTaGTCGGGGCTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHGPRPQ*SGLLSC
Trigger: GCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCC...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTGGGCCTCGGCCACAGTaGTCGGGGCTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSGLLSCRTFSMEAARVPGPRPQ*SGLLSC
Trigger: GCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCC...AGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTCCAGGGCGGCACCCATaGACCCCAAGGCCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGPGRHP*TPRPRA
Trigger: TGCTCGGGGCCTTGGGGTGCATGGGTGCCGCCCTGG...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACCAAACAGAAGCCCCTaGACCTGGAGGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKPNRSP*TWRGLV
Trigger: CACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGG...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCACTCCCTTTGCCATCTaGGGCCCAGGAGGTTTACCT +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPTPFAI*GPGGLP
Trigger: AGGTAAACCTCCTGGGCCGCAGATGGCAAAGGGAGT...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGACCATGCTGTCCACTaGTGGGTCTCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPDHAVH*WVSPRR
Trigger: CCTCCTGGGCGAGACCCAGCAGTGGACAGCATGGTC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCCCAGCGGGCCACTCTaGGGCCCGAACTTCACGCAA +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPPSGPL*GPNFTQ
Trigger: TTGCGTGAAGTTCGGGCCGCAGAGTGGCCCGCTGGG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCGGGTTCCCTCCACGGTaGTGCCCTCATCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPGFPPR*CPHPSS
Trigger: GCTTGAGGGATGAGGGCAGCACCGTGGAGGGAACCC...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTCACCTCCCAGCAGGCTaGATGGGCCTCGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELHLPAG*MGLGRP
Trigger: TGGTCTGCCGAGGCCCATGCAGCCTGCTGGGAGGTG...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGGGCAATGGTGCTGGTaGAGAGCCTGGGACGGGGCC +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPGQWCW*RAWDGA
Trigger: GGCCCCGTCCCAGGCTCTGCACCAGCACCATTGCCC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCCCACAGAGCCCCAATaGCCAGACTGTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPPTEPQ*PDCGLH
Trigger: GTGCAGGCCACAGTCTGGGCATTGGGGCTCTGTGGG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCTGGGCCTCCTGCCCTTaGCCTGGTTCCGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGWASCP*PGSGFL
Trigger: CAGGAAACCGGAACCAGGGCAAGGGCAGGAGGCCCA...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGGTAGCGAGGGGCTCTTaGGGCTGTATACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREVARGS*GCILPC
Trigger: GCAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTAC...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCGTCGTCCGAGGGCTTaGTCTCCTGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAARRPRA*SPGCSC
Trigger: ACAAGAACAACCAGGAGACCAAGCCCTCGGACGACG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCGTCGTCCGAGGGCTTaGTCTCCTGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAARRPRA*SPGCSC
Trigger: ACAAGAACAACCAGGAGACCAAGCCCTCGGACGACG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACGGGGGACAGGGCTCCTaGCTTCTTCCGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHGGQGS*LLPHRP
Trigger: CGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCC...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGGGGGACAGGGCTCCTaGCTTCTTCCGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAGGQGS*LLPHRP
Trigger: CGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELRGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCTGCGGCCTGCCCTTCTaGCGGCTGCTGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPCGLPF*RLLSRM
Trigger: CATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCA...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGCTGGGGCCACCAAGTaGAGGCCAGGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLAGATK*RPGGAG
Trigger: ACCAGCCCCACCTGGCCTCCACTTGGTGGCCCCAGC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGCCAGGCTCTCAGAGTaGGGTCAGCTCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPARLSE*GQLGGA
Trigger: AGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGACACGCAGGGTGGGTaGACAGGCACTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGADTQGG*TGTVSF
Trigger: GAAGGAAACAGTGCCTGTCCACCCACCCTGCGTGTC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTGGGGTAGAGGTGCGTaGGAGATGCTCGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREWGRGA*EMLGPS
Trigger: ACTCGGACCGAGCATCTCCCACGCACCTCTACCCCA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCATCAGACGGCAGCACATaGGAGTCCCAGCGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPSDGST*ESQRAT
Trigger: AGTGGCCCGCTGGGACTCCCATGTGCTGCCGTCTGA...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTGCCACTGGAGAGCTCTaGATTCGGAATCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSATGEL*IRNPGP
Trigger: GGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGC...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGAGGTGCAGCAGCCACTaGAGAGCTCTGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRRCSSH*RALDSE
Trigger: TTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCT...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCATGGCTCTGGCGCACCTaGGCTGTGTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPWLWRT*AVSVSL
Trigger: CAGGGAGACAGACACAGCCCAGGTGCGCCAGAGCCA...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAGATGCGAACTCATGGTaGGACCATCCGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSADANSW*DHPEQG
Trigger: GCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATC...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACTGCCTACATTTTGGTaGCACTCCTGGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPLPTFW*HSWSCL
Trigger: AAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCGTCTGCCTACATTTTaGTGGCACTCCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAARLPTF*WHSWSC
Trigger: GCAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTGTGCCAAGACCCTCTaGGAAGGCAGAGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSCAKTL*EGRGSP
Trigger: TGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTGTGCCAAGACCCTCTaGGAAGGCAGAGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRECAKTL*EGRGSP
Trigger: TGGGGACCCTCTGCCTTCCCAGAGGGTCTTGGCACA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCTGGTTCCGGTTTCCTaGGATGTGGCCAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGLVPVS*DVASHC
Trigger: ACAGTGGCTGGCCACATCCCAGGAAACCGGAACCAG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCACTCCCGCCGCCTGTaGCCACAACAGCATTCACTC +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAHSRRL*PQQHSL
Trigger: GAGTGAATGCTGTTGTGGCCACAGGCGGCGGGAGTG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSGLVAR*DAVRVR
Trigger: TCTAACTCTGACAGCGTCCCACCTGGCTACGAGCCC...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCATCGGCGTCGAAGGTaGACTCCAGGCTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSHRRRR*TPGCRA
Trigger: TGCTCTACAGCCTGGAGTTCACCTTCGACGCCGATG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTCCGAGAAGTCAATCTTaGAGGAGGGCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAPRSQS*RRAGRT
Trigger: AGTTCTCCCTGCCCTCCTTCAAGATTGACTTCTCGG...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTGGTCCCTTGCTGTGGTaGCGACGACTCATCAACCTC +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSGPLLW*RRLINL
Trigger: GAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACC...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPPGGAL*CHQSQH
Trigger: GTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGAATGGCAAAAGAGAATaGGGAGGCCACCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRNGKRE*GGHQVL
Trigger: GAGGACCTGGTGGCCTCCTCATTCTCTTTTGCCATT...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCACCTGCCACAGAAGCCTaGGACAGAACAAACCAAATC +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPPATEA*DRTNQI
Trigger: GATTTGGTTTGTTCTGTCTCAGGCTTCTGTGGCAGG...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGCAGGGAGCTGGGTGTaGGGACCATGCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELAGSWV*GPCCPL
Trigger: CAGTGGACAGCATGGTCCTCACACCCAGCTCCCTGC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGACCACCTCAGCACCCCTaGGTAGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRPPQHP*VAGTTG
Trigger: GCCTGTGGTCCCAGCTACTCAGGGGTGCTGAGGTGG...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCAGGCCGGGGCCGTCTaGAAGGTGCTGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPQAGAV*KVLTVS
Trigger: TGAAACAGTCAGCACCTTTCAGACGGCCCCGGCCTG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGGCCCCACTCTCCGGTaGAGGGCGTCTATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKGPTLR*RASIFF
Trigger: GAAGAAAATAGACGCCCTTCACCGGAGAGTGGGGCC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGGCCCCACTCTCCGGTaGAGGGCGTCTATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSGPTLR*RASIFF
Trigger: GAAGAAAATAGACGCCCTTCACCGGAGAGTGGGGCC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAACTGGACCGGGCGGCTaGCCAGGAAGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPTGPGG*PGSSDP
Trigger: TGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGT...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGGCTGTATACTGCCCTaGCGTTCAGGAACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKGCILP*RSGTPP
Trigger: CGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGAGGGCAGGGAGAACTaGTGGCTCACCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGEGREN*WLTPLL
Trigger: CAAGAGAGGGGTGAGCCAGCAGTTCTCCCTGCCCTC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGAAGCTGCCGTCCATGTaGTTTTCAAAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVKLPSM*FSKAAK
Trigger: CTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTT...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGACACCACACACTCGTTaGTGTTGTCGCTGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGTPHTR*CCRCSR
Trigger: ACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGT...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAA +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPSGLLS*RTFSME
Trigger: TTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGA...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTGCACGCAGCTTGTGTaGCAAGACCCTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRECTQLV*QDPLGR
Trigger: CCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGGGCCTCTTAGAGCCTaGACCCCCGGCCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAGPLRA*TPGQAP
Trigger: AGGTGCCTGGCCGGGGGTGCAGGCTCTAAGAGGCCC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCCCCGGATGGCTACTaGAAGGCAAAGAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPPPDGY*KAKRGA
Trigger: GGCTCCTCTCTTTGCCTTGCAGTAGCCATCCGGGGG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCCGGCACCGCGGTGGATaGCCTCTGGGCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIRHRGG*PLGLLP
Trigger: GGGCAGGAGGCCCAGAGGGCATCCACCGCGGTGCCG...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGGGACGCTGTCAGAGTTaGAGCCGGCAGATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRGVHVLGELLLILFVDGGRCQS*SRQMGQ
Trigger: CTGCCCCATCTGCCGGCTGCAACTCTGACAGCGTCC...CCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGTAGCGAGGGGCTCTTaGGGCTGTATACTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGVARGS*GCILPC
Trigger: GCAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTAC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRESLDDY*KHAPVQ
Trigger: CTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPRGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTA +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKHPLRG*GKTGTV
Trigger: TACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTA +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAHPLRG*GKTGTV
Trigger: TACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATG...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRESSSSS*MGEDGD
Trigger: GTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPAGHSQ*KLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTGTAGATGTCAGCAGGTaGGCCTCGGCCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPSGGGASTSSESFSSSSVDVSR*ASATVL
Trigger: GAGCACTGTGGCCGAGGCCCACCTGCTGACATCTAC...AGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGGGTGGATCCAGCCCTaGGTCACCAGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMGWIQP*VTRPRH
Trigger: GTGCCTGGGCCTGGTGACCCAGGGCTGGATCCACCC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGTCGGGCCCCAGGGCTaGCAGGTAGATGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLVGPQG*QVDVSR
Trigger: CCTGCTGACATCTACCTGCCAGCCCTGGGGCCCGAC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCTGGGTCTGGCGTCCCTaGGGCTTGGGCAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPWVWRP*GLGNGA
Trigger: AGCACCATTGCCCAAGCCCCAGGGACGCCAGACCCA...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGGTGGGGAGCGGCCCTaGGTGAGAACAAGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAGGERP*VRTSPC
Trigger: GCACGGGCTTGTTCTCACCCAGGGCCGCTCCCCACC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCGGTTTCCTGGGATGTaGCCAGCCACTGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQRFPGM*PATVLP
Trigger: TGGCAGGACAGTGGCTGGCCACATCCCAGGAAACCG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGCCGCTCCTACCGATCTaGAGCCCCAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMPLLPI*SPRGAG
Trigger: CCCAGCCCCTCTGGGGCTCCAGATCGGTAGGAGCGG...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCTGTCGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATCCGAGAAGTCAATCTTaGAGGAGGGCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: AVGGLALRPALLAAAVQDPRSQS*RRAGRT
Trigger: AGTTCTCCCTGCCCTCCTTCAAGATTGACTTCTCGG...ATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCCTGCAGGAGGTAGCTaGCCCGGTCCACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQPAGGS*PGPQFA
Trigger: AGCAAATTGTGGACCGGGTCAGCTACCTCCTGCAGG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTTTCCCGCAGGGCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCGCCGTCCGAGATGCCTaGATAGGTGATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: LSRRASSAPPSGGGASTSAVRDA*IGDFFI
Trigger: TATGAAGAAATCACCTATTCAGGCATCTCGGACGGC...GGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGCCCTGCGGGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGGTCCCTTGCTGTGGTaGCGACGACTCATCAACCTC +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPGPLLW*RRLINL
Trigger: GAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGGTCCCTTGCTGTGGTaGCGACGACTCATCAACCTC +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGGPLLW*RRLINL
Trigger: GAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVALLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTGCCCCTGAACATCTGTaGAGATGGTGCTTCGACCAC +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPAAPEHL*RWCFDH
Trigger: GTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGC...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTAACGATGAGCCCATCTaGGCACATCAGACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSNDEPI*AHQTAA
Trigger: TGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTT...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGAAAACGAACCAACGATaGGCCCATCTGAGCACATCA +
Preference number: 4 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVKTNQR*AHLSTS
Trigger: TGATGTGCTCAGATGGGCTCATCGTTGGTTCGTTTT...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCAAGAGACAGGGACTaGGCTTGGGAAGACGTGATC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREPRDRD*AWEDVI
Trigger: GATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGGCTGTATACTGCCCTaGCGTTCAGGAACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGGCILP*RSGTPP
Trigger: CGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCAAGCTGCCGTCCATGTaGTTTTCAAAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPKLPSM*FSKAAK
Trigger: CTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTT...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CGCAGGGCCAGCTCTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGACCCGGTCCACAATTTaGTTCTGCTTTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRASSAPPSGGGASTSSETRSTI*FCFKGF
Trigger: GAAGCCTTTAAAGCAGAAGCAAATTGTGGACCGGGT...CTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAGAGCTGGCCCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGACCCGGTCCACAATTTaGTTCTGCTTTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGTRSTI*FCFKGF
Trigger: GAAGCCTTTAAAGCAGAAGCAAATTGTGGACCGGGT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCACACCACACACTCGTTaGTGTTGTCGCTGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAATPHTR*CCRCSR
Trigger: ACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCTGCCCTTCTGGCGGCTaGTGTCCAGGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPCPSGG*CPGCGR
Trigger: TCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCA...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAA +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGASGLLS*RTFSME
Trigger: TTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCT +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPHSARG*CPAGHS
Trigger: AGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTG...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCT +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPHSARG*CPAGHS
Trigger: AGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGACCATGCTGTCCACTaGTGGGTCTCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPDHAVH*WVSPRR
Trigger: CCTCCTGGGCGAGACCCAGCAGTGGACAGCATGGTC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAATGCATGGGAACATGTaGAGGAGTATGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPMHGNM*RSMCVC
Trigger: ACACACGCACATACTCCTGCACATGTTCCCATGCAT...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCGGTCCCCAATCCGTCTaGCTACATTTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSGPQSV*LHFGGT
Trigger: AGTGCCACCAAAATGTAGGCAGACGGATTGGGGACC...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGTTCTAGATCACACCTaGACTCCCCAGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSVLDHT*TPQLRK
Trigger: CTTCCGGAGCTGGGGAGTGCAGGTGTGATCTAGAAC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGATGTCGCCGTCCTCGGTaGGGCTGTCGGCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRCRRPR*GCRHRL
Trigger: AAGACGATGCCGACAGCCCCACCGAGGACGGCGACA...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGSLDDY*KHAPVQ
Trigger: CTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCT...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPGLVAR*DAVRVC
Trigger: ACAAACTCTGACAGCGTCCCACCTGGCTACGAGCCC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000399577.9
CDS-3UTR CCA 90 bp GGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGCTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGVHVLGELLLILFVDGLLSRM*SIAARG
Trigger: TCCCCTCGCGGCTATCGACCACATCCTGGACAGCAG...CCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQSSSSS*MGEDGD
Trigger: GTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGA...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAAGHSQ*KLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGC...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAAGGCCACTGAATGCTaGCTGCTGGAAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHREKATEC*LLEAAV
Trigger: CACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGGGGAGAGAGGTGCTTaGGGTGGGGTAGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATGERGA*GGVEVR
Trigger: ACGCACCTCTACCCCACCCCAAGCACCTCTCTCCCC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCGCCACTGGAGAGCTCTaGATTCGGAATCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPATGEL*IRNPGP
Trigger: GGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGC...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCGTCTGCCTACATTTTaGTGGCACTCCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKRLPTF*WHSWSC
Trigger: GCAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCATCGGCGTCGAAGGTaGACTCCAGGCTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPHRRRR*TPGCRA
Trigger: TGCTCTACAGCCTGGAGTTCACCTTCGACGCCGATG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCCTGCAGGAGGTAGCTaGCCCGGTCCACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPPAGGS*PGPQFA
Trigger: AGCAAATTGTGGACCGGGTCAGCTACCTCCTGCAGG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPGPGRG*RTRGTG
Trigger: CCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGCCGTCCGAGATGCCTaGATAGGTGATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAAAVRDA*IGDFFI
Trigger: TATGAAGAAATCACCTATTCAGGCATCTCGGACGGC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGGAACGGGGGCTCTaGACTAGGGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLGERGL*TRDGKL
Trigger: CAGCTTTCCATCCCTAGTTCAGAGCCCCCGTTCCCC...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGGAGCAGGTGGCTGTGTaGGCGGACGCCCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVEQVAV*ADALRT
Trigger: TGTCCTGAGGGCGTCCGCTCACACAGCCACCTGCTC...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCAGGAACTCCTCCGATaGCTGGCAGTAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKQELLR*LAVDGD
Trigger: ATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCAGGAACTCCTCCGATaGCTGGCAGTAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LRHPVGEGRPRPRRASPHQELLR*LAVDGD
Trigger: ATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTG...ATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAACACCACACACTCGTTaGTGTTGTCGCTGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGATPHTR*CCRCSR
Trigger: ACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGT...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSSGLLS*RTFSME
Trigger: TTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGGGGCCTCGGCCACAGTaGTCGGGGCTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKGPRPQ*SGLLSC
Trigger: GCAGGACAGCAGCCCCGAGCACTGTGGCCGAGGCCC...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGTGGCCACAGGGGGCATaGAGACAGGAGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVWPQGA*RQEAGS
Trigger: TGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCA...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTCTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACC +
Preference number: 4 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAALGMES*CPSSCT
Trigger: GGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAG...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACCTGAGACACTCTAGCTaGCCAGGGCGGCACCCATGC +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHLRHSS*PGRHPC
Trigger: GCATGGGTGCCGCCCTGGGCAGCTAGAGTGTCTCAG...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGACAAATCAGAGAGAACTaGAAGGGGGCCGGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRQIREN*KGAGRG
Trigger: TCCGCGCCCGGCCCCCTTGCAGTTCTCTCTGATTTG...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTCCCTGGGCCAGTCCTaGCACAGAAGCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPSLGQS*HRSLRQ
Trigger: CTGTCTCAGGCTTCTGTGGCAGGACTGGCCCAGGGA...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGCATGTGTGAACATGTaGGTGAGCATGTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGACVNM*VSMCKW
Trigger: CCACTTGCACATGCTCACGCACATGTTCACACATGC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCCGAGTGCACACACATaGATGGGAACATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKPSAHT*MGTCAG
Trigger: TCCTGCACATGTTCCCATGCATGTGTGTGCACTCGG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGAGGTGCGTGGGAGATaGTCGGTCCGAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPEVRGR*SVRVHT
Trigger: TGTGTGCACTCGGACCGAGCATCTCCCACGCACCTC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCTGGGAAGATGCGGATaGGGACGAAGACCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSLGRCG*GRRPKN
Trigger: GTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGCCACGAGGGACTGTGTaGCAGGCCCATGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMPRGTV*QAHGDA
Trigger: GGCATCACCATGGGCCTGGCACACAGTCCCTCGTGG...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGGGCTTGGGCAATGGTaGTGGTGCAGAGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAGLGQW*WCRAWD
Trigger: GTCCCAGGCTCTGCACCAGCACCATTGCCCAAGCCC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAGGCCAGCCACTGTCCTaGCAAGGTTCTTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRGQPLS*QGSYGW
Trigger: CCAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCC...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTCCCTGTCAGAGTTAGAGTaGTCATCATGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GAEGGGSHSDAWCHATRSLSELE*SSCSRL
Trigger: GAGCCTGGAGCATGATGAGCACTCTAACTCTGACAG...GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAATCGTCCACCACAGCCTaGATGACTACTGGAAACACG +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKSSTTA*MTTGNT
Trigger: CGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGA...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCGTCCACCACAGCCTaGATGACTACTGGAAACACG +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKSSTTA*MTTGNT
Trigger: CGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGA...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACACTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATLLSRM*SIAARG
Trigger: TCCCCTCGCGGCTATCGACCACATCCTGGACAGCAG...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGACTGCTGTCCAGGATGTaGTCGATAGCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRLLSRM*SIAARG
Trigger: TCCCCTCGCGGCTATCGACCACATCCTGGACAGCAG...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGCATCCTCTTCGTGGATaGGGGAAGACGGGGACCGTA +
Preference number: 4 (lower is better)
Translates to: GGGASTSSESFSSSSSWMHPLRG*GKTGTV
Trigger: TACGGTCCCCGTCTTCCCCCATCCACGAAGAGGATG...CATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACCGTCTCCATGGAGGTaGGCCGTCCTGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAPSPWR*AVLAGR
Trigger: TCTACCTGCCAGGACGGCCCACCTCCATGGAGACGG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262370.12
CDS-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGAGAGGTGCTTGGGGTaGGGTAGAGGTGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMERCLG*GRGAWE
Trigger: CTCCCACGCACCTCTACCCCACCCCAAGCACCTCTC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGGGGAGAGAGGTGCTTaGGGTGGGGTAGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMGERGA*GGVEVR
Trigger: ACGCACCTCTACCCCACCCCAAGCACCTCTCTCCCC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGTCCCGCAGTGGACAGTaGCTCTGGCGCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVSRSGQ*LWRTWA
Trigger: AGCCCAGGTGCGCCAGAGCCACTGTCCACTGCGGGA...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCGATGCGAACTCATGGTaGGACCATCCGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPDANSW*DHPEQG
Trigger: GCCTTGTTCCGGATGGTCCCACCATGAGTTCGCATC...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAACCGATGCGAACTCATaGTGGGACCATCCGGAACAA +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKTDANS*WDHPEQ
Trigger: TTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGT...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTAACAGAGGGACTCGCTaGGCTCAAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSNRGTR*AQEDRG
Trigger: ACCTCTGTCTTCTTGAGCCCAGCGAGTCCCTCTGTT...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCCCAATGCCCAGACTGTaGCCTGCACGACGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIPMPRL*PARRRR
Trigger: CCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGG...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGCCAATGCCCAGACTGTaGCCTGCACGACGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVPMPRL*PARRRR
Trigger: CCGGCGGCGTCGTGCAGGCCACAGTCTGGGCATTGG...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAACGGCTGGGTTAGGGTaGAACTCGGTCAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATTAGLG*NSVNPG
Trigger: CCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGT...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAACGGCTGGGTTAGGGTaGAACTCGGTCAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRTAGLG*NSVNPG
Trigger: CCCTGGGTTGACCGAGTTCCACCCTAACCCAGCCGT...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CAA 72 bp CGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTaGGGAAGACGTGATCCAGGGGCTCTCCCAATCGGG +
Preference number: 4 (lower is better)
Translates to: RGRTPSKRQGLS*GRRDPGALPIG
Trigger: CCCGATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCCCGAGAAGTCAATCTTaGAGGAGGGCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGPRSQS*RRAGRT
Trigger: AGTTCTCCCTGCCCTCCTTCAAGATTGACTTCTCGG...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACCACCACAGCCTGGATaGCTACTGGAAACACGCCCC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAPPQPG*LLETRP
Trigger: GGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCAGCTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PARPGSQSGVSSAALGSGRCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...CCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCAACCTCTTCTGTTATaGAACTCTCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKQPLLL*NSQGSC
Trigger: GCAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCAACCTCTTCTGTTATaGAACTCTCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRHPVGEGRPRPRRASPHQPLLL*NSQGSC
Trigger: GCAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTG...ATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAACAACCTCTTCTGTTATaGAACTCTCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKQPLLL*NSQGSC
Trigger: GCAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTG...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACTTCTGCAGGCCTCCTaGGTTCTCCGGGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSLLQAS*VLRAGT
Trigger: GGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCCTGCCACAGAAGCCTaGGACAGAACAAACCAAATC +
Preference number: 4 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSPATEA*DRTNQI
Trigger: GATTTGGTTTGTTCTGTCTCAGGCTTCTGTGGCAGG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTAACGATGAGCCCATCTaGGCACATCAGACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELNDEPI*AHQTAA
Trigger: TGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTT...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTAAAACGAACCAACGATaGGCCCATCTGAGCACATCA +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGKTNQR*AHLSTS
Trigger: TGATGTGCTCAGATGGGCTCATCGTTGGTTCGTTTT...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAAAAACGAACCAACGATaGGCCCATCTGAGCACATCA +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAKTNQR*AHLSTS
Trigger: TGATGTGCTCAGATGGGCTCATCGTTGGTTCGTTTT...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTCGCATTCTTTCCCCATaGATTGTTAAAGCCACGACC +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGRILSP*IVKATT
Trigger: GGTCGTGGCTTTAACAATTCATGGGGAAAGAATGCG...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACCACCTCAGCACCCCTaGGTAGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSPPQHP*VAGTTG
Trigger: GCCTGTGGTCCCAGCTACTCAGGGGTGCTGAGGTGG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTTCCGGAAGCTTGACCTaGATCGTGACATTCGCACGG +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELSGSLT*IVTFAR
Trigger: CCGTGCGAATGTCACGATTCAGGTCAAGCTTCCGGA...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCAGGAACTCCTCCGATaGCTGGCAGTAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPQELLR*LAVDGD
Trigger: ATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCACCCGGTCCACAATTTaGTTCTGCTTTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAATRSTI*FCFKGF
Trigger: GAAGCCTTTAAAGCAGAAGCAAATTGTGGACCGGGT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAAACTCTCAGGGGAGCTaGTTTCCCGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVANSQGS*FPAGPA
Trigger: AGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACGCTGCTCGGGTCCCTTaGTGTGGTGACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHAARVP*CGDDDS
Trigger: TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTGGCCACAGGGGGCATaGAGACAGGAGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVWPQGA*RQEAGS
Trigger: TGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCA...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAGGGACAGTTCACTGTaGTCTTTGATCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GHADRRPAHNGVRSSPSARDSSL*SLIKSH
Trigger: GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCT...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCTGCTGGAAGCAGCTGTaGCTCCGCCCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFCWKQL*LRPSAR
Trigger: CCTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCA...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGATGTGCGTGAGCATGTaGAAGTGGGCGTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKMCVSM*KWACIC
Trigger: ACAAATGCACGCCCACTTGCACATGCTCACGCACAT...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGCCGAGTGCACACACATaGATGGGAACATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQPSAHT*MGTCAG
Trigger: TCCTGCACATGTTCCCATGCATGTGTGTGCACTCGG...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCTGTCAGAGTTAGAGTaGTCATCATGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKLSELE*SSCSRL
Trigger: GAGCCTGGAGCATGATGAGCACTCTAACTCTGACAG...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPSLDDY*KHAPVQ
Trigger: CTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCT...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRGLVAR*DAVRVC
Trigger: ACAAACTCTGACAGCGTCCCACCTGGCTACGAGCCC...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399577.9
CDS-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCAGGGGACAGCTGGCCTaGGACAGGCCGTCCGAGATG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIRGQLA*DRPSEM
Trigger: CATCTCGGACGGCCTGTCCCAGGCCAGCTGTCCCCT...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTGTAGATGTCAGCAGGTaGGCCTCGGCCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGVDVSR*ASATVL
Trigger: GAGCACTGTGGCCGAGGCCCACCTGCTGACATCTAC...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAGGTGGGGCTGGTGGTaGCGAGGCCGTGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPRWGWW*RGRGPS
Trigger: AGACGGCCCACGGCCTCGCCACCACCAGCCCCACCT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGTCAGCTCGGCGGCGCTaGGATCGGGGCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRSARRR*DRGWGH
Trigger: GTGGCCCCAGCCCCGATCCCAGCGCCGCCGAGCTGA...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACAGCCCACAGGACCCTaGGGAACGGGGGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSQPTGP*GTGALN
Trigger: GTTCAGAGCCCCCGTTCCCCAGGGTCCTGTGGGCTG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCACCAGGAGGAGGTGTaGAGCTTGGTGACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPHQEEV*SLVTRP
Trigger: TGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCGGGTGGATCCAGCCCTaGGTCACCAGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFGWIQP*VTRPRH
Trigger: GTGCCTGGGCCTGGTGACCCAGGGCTGGATCCACCC...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCCCCCCGAAGCGCGTCTaGGAGGTCACGTACCGGCTT +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIPPKRV*EVTYRL
Trigger: AAGCCGGTACGTGACCTCCCAGACGCGCTTCGGGGG...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCACCGATGCGAACTCATaGTGGGACCATCCGGAACAA +
Preference number: 4 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGTDANS*WDHPEQ
Trigger: TTGTTCCGGATGGTCCCACCATGAGTTCGCATCGGT...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGAGCGGGGGAGCAGGTaGCTGTGTGAGCGGACGCCC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPERGSR*LCERTP
Trigger: GGGCGTCCGCTCACACAGCCACCTGCTCCCCCGCTC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCTGATCTTGAATTCCTaGGCTCAAGTGATCTATCCC +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAALILNS*AQVIYP
Trigger: GGGATAGATCACTTGAGCCCAGGAATTCAAGATCAG...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACGGTCTCAGGCTGGAGTaGGTGGGTGGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHGLRLE*VGGCVC
Trigger: ACACACACACCCACCCACCCACTCCAGCCTGAGACC...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCACTCCTGCCCTTGCCCTaGTTCCGGTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVALLPLP*FRFPGM
Trigger: CATCCCAGGAAACCGGAACCAGGGCAAGGGCAGGAG...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACGACACGGCACCGCGGTaGATGCCCTCTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHDTAPR*MPSGPP
Trigger: AGGAGGCCCAGAGGGCATCCACCGCGGTGCCGTGTC...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCTCACACTCGGATGCCTaGTGCCACGCCACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTISHSDA*CHATRS
Trigger: GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGA...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTCATCGGCGTCGAAGGTaGACTCCAGGCTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGHRRRR*TPGCRA
Trigger: TGCTCTACAGCCTGGAGTTCACCTTCGACGCCGATG...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAARCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGGCCGTCCGAGATGCCTaGATAGGTGATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKAVRDA*IGDFFI
Trigger: TATGAAGAAATCACCTATTCAGGCATCTCGGACGGC...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR TCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACGGTCCCTTGCTGTGGTaGCGACGACTCATCAACCTC +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHGPLLW*RRLINL
Trigger: GAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACC...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTGTTCACTGTGCTCTTTaGTCAAGAGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELVHCAL*SRVTTA
Trigger: GGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAAC...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGCCCCTGAACATCTGTaGAGATGGTGCTTCGACCAC +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPAPEHL*RWCFDH
Trigger: GTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCCTGCCACAGAAGCCTaGGACAGAACAAACCAAATC +
Preference number: 4 (lower is better)
Translates to: DRPPSPDGETSGPESQDPPATEA*DRTNQI
Trigger: GATTTGGTTTGTTCTGTCTCAGGCTTCTGTGGCAGG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCTGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFCSEPP*ASGRVL
Trigger: CAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCA...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACTGCTCGGAGCCACCGTaGGCCTCAGGGAGGGTACTG +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHCSEPP*ASGRVL
Trigger: CAGTACCCTCCCTGAGGCTCACGGTGGCTCCGAGCA...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGGCAGGGAGCTGGGTGTaGGGACCATGCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVAGSWV*GPCCPL
Trigger: CAGTGGACAGCATGGTCCTCACACCCAGCTCCCTGC...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGCCAAGAGACAGGGACTaGGCTTGGGAAGACGTGATC +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLPRDRD*AWEDVI
Trigger: GATCACGTCTTCCCAAGCTCAGTCCCTGTCTCTTGG...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTGGCTGTATACTGCCCTaGCGTTCAGGAACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CSGLLSCRTFSMEAARVPGCILP*RSGTPP
Trigger: CGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCC...AGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTACCCGGTCCACAATTTaGTTCTGCTTTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAQEADLMLGATVSLREGTRSTI*FCFKGF
Trigger: GAAGCCTTTAAAGCAGAAGCAAATTGTGGACCGGGT...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGTTAAAGGGACAAGAGTaGTCATCATGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRELKGQE*SSCSRL
Trigger: GAGCCTGGAGCATGATGAGCACTCTTGTCCCTTTAA...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000399577.9
CDS-3UTR GCA 90 bp GCTGCTCGGGTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGTGCTGTCGGGGGCCTTaGTCTGCGGCCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: AARVPCCGDDDSSTSSVMCCRGP*SAACPS
Trigger: AGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCA...CATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GCACCAGAGGGCCCCTCGAGGACGGACTCCCTCCAAGAGACAGGGACTGAGCTTTCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAA +
Preference number: 4 (lower is better)
Translates to: APEGPSRTDSLQETGTELSGLLS*RTFSME
Trigger: TTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGA...AAGCTCAGTCCCTGTCTCTTGGAGGGAGTCCGTCCTCGAGGGGCCCTCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRELGMES*CPSSCT
Trigger: GGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAG...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCAAAAGAGAAGAGAACTaGAAGGGGACATTCCAATGG +
Preference number: 4 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPKREEN*KGTFQW
Trigger: CCATTGGAATGTCCCCTTGCAGTTCTCTTCTCTTTT...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGATGTGCGTGAGCATGTaGAAGTGGGCGTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: KATECWLLEAAVPPPLGQMCVSM*KWACIC
Trigger: ACAAATGCACGCCCACTTGCACATGCTCACGCACAT...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGTCGGCAGACCAGAGCTaGACGCAGCTTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMSADQS*TQLVCQ
Trigger: TTGGCACACAAGCTGCGTGCAGCTCTGGTCTGCCGA...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTTCGGCAGACCAGAGCTaGACGCAGCTTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGSADQS*TQLVCQ
Trigger: TTGGCACACAAGCTGCGTGCAGCTCTGGTCTGCCGA...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAAAGAGCACGTGGGCGTaGCCAGTCACTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAKSTWA*PVTSTT
Trigger: TGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTT...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGGGAAGAAAGAGCACGTGGGCGTaGCCAGTCACTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: GVHVLGELLLILFVDGGRKSTWA*PVTSTT
Trigger: TGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTT...TCTTCCCCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACACGTCGTCCGAGGGCTTaGTCTCCTGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATRRPRA*SPGCSC
Trigger: ACAAGAACAACCAGGAGACCAAGCCCTCGGACGACG...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTTCCTCATCCTCTTCGTaGATGGGGGAAGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: CSGLLSCRTFSMEAARVPSSSSS*MGEDGD
Trigger: GTCCCCGTCTTCCCCCATCCACGAAGAGGATGAGGA...AGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTTCGTGGATGGGGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGVHVLGELLLILFVDGAGHSQ*KLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGC...CCCATCCACGAAGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGGTAGATGTCAGCAGGTaGGCCTCGGCCACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVVDVSR*ASATVL
Trigger: GAGCACTGTGGCCGAGGCCCACCTGCTGACATCTAC...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGTGGTGGCGAGGCCGTaGGCCGTCTCCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPVVARP*AVSMEV
Trigger: CACCTCCATGGAGACGGCCCACGGCCTCGCCACCAC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCGCTGGGGCCACCAAGTaGAGGCCAGGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPAGATK*RPGGAG
Trigger: ACCAGCCCCACCTGGCCTCCACTTGGTGGCCCCAGC...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGACACGCAGGGTGGGTaGACAGGCACTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVADTQGG*TGTVSF
Trigger: GAAGGAAACAGTGCCTGTCCACCCACCCTGCGTGTC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCCATGCTGTCCACTGCTaGGTCTCGCCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFHAVHC*VSPRRR
Trigger: CCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGAGGTGCAGCAGCCACTaGAGAGCTCTGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRCSSH*RALDSE
Trigger: TTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCTCCTGCCTCCCGCAGTaGACAGTGGCTCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFSCLPQ*TVALAH
Trigger: GTGCGCCAGAGCCACTGTCCACTGCGGGAGGCAGGA...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTGTGCGAACCACTGCCTaGACAGAGCCGCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGVRTTA*TEPPSV
Trigger: TACAGAAGGCGGCTCTGTCCAGGCAGTGGTTCGCAC...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCACTGATCTTGAATTCCTaGGCTCAAGTGATCTATCCC +
Preference number: 4 (lower is better)
Translates to: VATGGMQTGGRLTTGSGALILNS*AQVIYP
Trigger: GGGATAGATCACTTGAGCCCAGGAATTCAAGATCAG...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CATGCTGTCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCAGAAGACAGAGGTTCATaGGAATGCAGAGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: HAVHCWVSPRRRTSCSEPEDRGS*ECRAQS
Trigger: TGACTGCGCTCTGCATTCCCATGAACCTCTGTCTTC...TGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGACAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCACCAGCCCTGACACATaGCTCCCAGCAGACACGGCC +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTITSPDT*LPADTA
Trigger: GGCCGTGTCTGCTGGGAGCCATGTGTCAGGGCTGGT...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGACCAGCCCTGACACATaGCTCCCAGCAGACACGGCC +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVTSPDT*LPADTA
Trigger: GGCCGTGTCTGCTGGGAGCCATGTGTCAGGGCTGGT...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCCGCTCCTACCGATCTaGAGCCCCAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPPLLPI*SPRGAG
Trigger: CCCAGCCCCTCTGGGGCTCCAGATCGGTAGGAGCGG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCCGTCTCCATGGAGGTaGGCCGTCCTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHPSPWR*AVLQVG
Trigger: TCCCACCTGCAGGACGGCCCACCTCCATGGAGACGG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCCGAGAAGTCAATCTTaGAGGAGGGCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPPRSQS*RRAGRT
Trigger: AGTTCTCCCTGCCCTCCTTCAAGATTGACTTCTCGG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCGGGGAACGGGGGCTCTaGACTAGGGATGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIGERGL*TRDGKL
Trigger: CAGCTTTCCATCCCTAGTTCAGAGCCCCCGTTCCCC...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAAATGGCAAAAGAGAATaGGGAGGCCACCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRNGKRE*GGHQVL
Trigger: GAGGACCTGGTGGCCTCCTCATTCTCTTTTGCCATT...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAATGACCTTAGGAGTTTaGGACCAGCCCGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRMTLGV*DQPGQH
Trigger: ATGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCAT...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGGCATTCACTCAGATGTaGGCACACCAAGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVAFTQM*AHQGPG
Trigger: CCCGGGCCCTTGGTGTGCTCACATCTGAGTGAATGC...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCCTTGCTCTGCGGCCTaGCCTTCTGGCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPPCSAA*PSGGCC
Trigger: ACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGATTCTCAATGGAAGCTaGTCGGGTCCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLILNGS*SGPLLW
Trigger: CCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAAT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTAGGGACAGTTCACTGTaGTCTTTGATCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSRDSSL*SLIKSH
Trigger: GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCT...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGGGACAGTTCACTGTaGTCTTTGATCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRERDSSL*SLIKSH
Trigger: GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCTGAGACACTCTAGCTaGCCAGGGCGGCACCCATGC +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHLRHSS*PGRHPC
Trigger: GCATGGGTGCCGCCCTGGGCAGCTAGAGTGTCTCAG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCTCCCTGGGCCAGTCCTaGCACAGAAGCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTISLGQS*HRSLRQ
Trigger: CTGTCTCAGGCTTCTGTGGCAGGACTGGCCCAGGGA...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACGACCATGCTGTCCACTaGTGGGTCTCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHDHAVH*WVSPRR
Trigger: CCTCCTGGGCGAGACCCAGCAGTGGACAGCATGGTC...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGATGCTCGGTCCGAGTaGACACACATGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMDARSE*THMHGN
Trigger: GTTCCCATGCATGTGTGTGCACTCGGACCGAGCATC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTGGCACTCCTGGAGCTaGCTTCTCTCTCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVWHSWS*LLSLPR
Trigger: ACGGGGGAGAGAGAGAAGGCAGCTCCAGGAGTGCCA...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAGGTCCCCAATCCGTCTaGCTACATTTTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRGPQSV*LHFGGT
Trigger: AGTGCCACCAAAATGTAGGCAGACGGATTGGGGACC...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTAGAGGTTCATGGGAATaGAGAGCGCAGTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: WEQREEGHTRMPGATPPARGSWE*RAQSKE
Trigger: TTCTTTTGACTGCGCTCTGCATTCCCATGAACCTCT...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGTTCTAGATCACACCTaGACTCCCCAGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMVLDHT*TPQLRK
Trigger: CTTCCGGAGCTGGGGAGTGCAGGTGTGATCTAGAAC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCAGGCCAGCCACTGTCCTaGCAAGGTTCTTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSGQPLS*QGSYGW
Trigger: CCAGCCGTAAGAACCTTGGCAGGACAGTGGCTGGCC...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPAGHSQ*KLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGC...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAAAGGCCACTGAATGCTaGCTGCTGGAAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAKATEC*LLEAAV
Trigger: CACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCTCAGACGGCAGCACATaGGAGTCCCAGCGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFSDGST*ESQRAT
Trigger: AGTGGCCCGCTGGGACTCCCATGTGCTGCCGTCTGA...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGGGAATCCAGGGCCCCTaGGAAGATGCGGATGCGGAC +
Preference number: 4 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKGIQGP*EDADAD
Trigger: GTCCGCATCCGCATCTTCCCAGGGGCCCTGGATTCC...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTTGTAAAACACTCACCTaGGCCACCCTGGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGCKTLT*ATLVEG
Trigger: GCCCTCTACCAGGGTGGCCCAGGTGAGTGTTTTACA...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTAGAGTAGCCCCCGGATaGCTACTGCAAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGRVAPG*LLQGKE
Trigger: CTCTTTGCCTTGCAGTAGCCATCCGGGGGCTACTCT...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGCTGGTTCCGGTTTCCTaGGATGTGGCCAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVLVPVS*DVASHC
Trigger: ACAGTGGCTGGCCACATCCCAGGAAACCGGAACCAG...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACTCTCAGGGGAGCTGCCGCGATGCGGCGGCTaGGAATGGAGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CGDDDSSTSSVMKLSGELPRCGG*EWSPWC
Trigger: GCACCATGGGCTCCATTCTCAGCCGCCGCATCGCGG...CAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACATCGGCGTCGAAGGTaGACTCCAGGCTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSHRRRR*TPGCRA
Trigger: TGCTCTACAGCCTGGAGTTCACCTTCGACGCCGATG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: STAGSRPGGGPHARSHRERCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALRPALLAAAVQDVVDSRRCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...GCGGCTATCGACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTCCGTCTGAAAGGTGCTaGCTGTTTCAATCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: PNFTQSSGTRTDGQRLGPPSERC*LFQSRG
Trigger: ACCCCTAGATTGAAACAGTCAGCACCTTTCAGACGG...AGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCGGCTGTATACTGCCCTaGCGTTCAGGAACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIGCILP*RSGTPP
Trigger: CGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCC...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCAACTCTCAGGGGAGCTaGTTTCCCGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFNSQGS*FPAGPA
Trigger: AGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCGCTGCTCGGGTCCCTTaGTGTGGTGACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFAARVP*CGDDDS
Trigger: TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGTGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCTCGGGGCTGCTGTCCTaGAGGACATTCTCAATGGAA +
Preference number: 4 (lower is better)
Translates to: SARGCCPAGHSQWKLLGSSGLLS*RTFSME
Trigger: TTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGA...GGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGCACAGTGCTCGGGGCTaGTGTCCTGCAGGACATTCT +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVHSARG*CPAGHS
Trigger: AGAATGTCCTGCAGGACAGCAGCCCCGAGCACTGTG...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCTGAGACACTCTAGCTaGCCAGGGCGGCACCCATGC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPLRHSS*PGRHPC
Trigger: GCATGGGTGCCGCCCTGGGCAGCTAGAGTGTCTCAG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCCAAACAGAAGCCCCTaGACCTGGAGGGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHPNRSP*TWRGLV
Trigger: CACAAGGCCCCTCCAGGTGCAGGGGCTTCTGTTTGG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCTCCCTGGCAGGGGCCTaGCAAACAGAAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPSLAGA*QTEAPA
Trigger: TGCAGGGGCTTCTGTTTGGCAGGCCCCTGCCAGGGA...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAAAAAGAGAAGAGAACTaGAAGGGGACATTCCAATGG +
Preference number: 4 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKKREEN*KGTFQW
Trigger: CCATTGGAATGTCCCCTTGCAGTTCTCTTCTCTTTT...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAGCATGTGTGAACATGTaGGTGAGCATGTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRACVNM*VSMCKW
Trigger: CCACTTGCACATGCTCACGCACATGTTCACACATGC...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGGATGCTCGGTCCGAGTaGACACACATGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVDARSE*THMHGN
Trigger: GTTCCCATGCATGTGTGTGCACTCGGACCGAGCATC...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTCTGGGAAGATGCGGATaGGGACGAAGACCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGLGRCG*GRRPKN
Trigger: GTTTTTGGGTCTTCGTCCGCATCCGCATCTTCCCAG...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCCCACGAGGGACTGTGTaGCAGGCCCATGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPPRGTV*QAHGDA
Trigger: GGCATCACCATGGGCCTGGCACACAGTCCCTCGTGG...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCATGCACGCAGCTTGTGTaGCAAGACCCTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSCTQLV*QDPLGR
Trigger: CCTTCCCAGAGGGTCTTGGCACACAAGCTGCGTGCA...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACTCTCAGTCCTCACGCGGACATaGCCCGGACCAGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: VPCCGDDDSSTSSVMKLSVLTRT*PGPGRT
Trigger: CGTGCGGCCTGGTCCGGGCCATGTCCGCGTGAGGAC...TGAGAGTTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTCGTCCACCACAGCCTaGATGACTACTGGAAACACG +
Preference number: 4 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHSSTTA*MTTGNT
Trigger: CGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGA...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGGTGAGTCGGCAGCAGTaGGCTCATGGCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVVSRQQ*AHGTKA
Trigger: TGCCTTTGTGCCATGAGCCCACTGCTGCCGACTCAC...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGTTTTGGTGGCACTCCTaGAGCTGCCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMFWWHS*SCLLSL
Trigger: GAGAGAGAGAAGGCAGCTCCAGGAGTGCCACCAAAA...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGAAGACAGAGGTTCATaGGAATGCAGAGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATEDRGS*ECRAQS
Trigger: TGACTGCGCTCTGCATTCCCATGAACCTCTGTCTTC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGTCACACTCGGATGCCTaGTGCCACGCCACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRSHSDA*CHATRS
Trigger: GGAGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGA...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
3UTR CAA 72 bp TGTCACCAAAGCCAGCACCAGGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAATGCTGGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CHQSQHQEEVWS*VTRPLNAGCWK
Trigger: CTTCCAGCAGCCAGCATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTCCTGGTGCTGGCTTTGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
3UTR CAA 72 bp GGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTaGGGACAGACGATCCCAGATCCCCGGACACCCACA +
Preference number: 4 (lower is better)
Translates to: GLPNCAKYAVSL*GQTIPDPRTPT
Trigger: TGTGGGTGTCCGGGGATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GCTGCTCGGGTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGCATCGGCGTCGAAGGTaGACTCCAGGCTGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: AARVPCCGDDDSSTSSVMHRRRR*TPGCRA
Trigger: TGCTCTACAGCCTGGAGTTCACCTTCGACGCCGATG...CATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAGCCGTCCGAGATGCCTaGATAGGTGATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRAVRDA*IGDFFI
Trigger: TATGAAGAAATCACCTATTCAGGCATCTCGGACGGC...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGGCCCGGCCAACATGGTaGAATCCCTTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMARPTW*NPFSTK
Trigger: TTTAGTAGAGAAGGGATTTCACCATGTTGGCCGGGC...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAAAGCTGCCGTCCATGTaGTTTTCAAAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAKLPSM*FSKAAK
Trigger: CTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTT...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGTGCTCGGGGCTGCTGTCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCAAGCTGCCGTCCATGTaGTTTTCAAAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SARGCCPAGHSQWKLLGSKLPSM*FSKAAK
Trigger: CTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTT...GGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGACAGCAGCCCCGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACATTAAAGGGACAAGAGTaGTCATCATGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGRALRPRKHGRGQKAATLKGQE*SSCSRL
Trigger: GAGCCTGGAGCATGATGAGCACTCTTGTCCCTTTAA...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000399577.9
CDS-3UTR GCA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAATGCATGGGAACATGTaGAGGAGTATGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: CERTPSGQDARYSPLGTRMHGNM*RSMCVC
Trigger: ACACACGCACATACTCCTGCACATGTTCCCATGCAT...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCTACCGGGCTTATAGGTaGGAACCACTGCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIYRAYR*EPLPGQ
Trigger: CTGTCCAGGCAGTGGTTCGCACCTATAAGCCCGGTA...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GCTGCTCGGGTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AARVPCCGDDDSSTSSVMSLDDY*KHAPVQ
Trigger: CTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCT...CATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GCTCGGGTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACCTCGAGCAGCGAGATaGGCTCGTAGCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ARVPCCGDDDSSTSSVMKPRAAR*ARSQVG
Trigger: TCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGG...TTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGCTGCCTACATTTTGGTaGCACTCCTGGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVLPTFW*HSWSCL
Trigger: AAGGCAGCTCCAGGAGTGCCACCAAAATGTAGGCAG...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGCCGTCCGAGATGCCTaGATAGGTGATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVAAVRDA*IGDFFI
Trigger: TATGAAGAAATCACCTATTCAGGCATCTCGGACGGC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCAAAGAGAGGAGCCTCCCACAGAGCCCCAATGCCCAGACTGTGCAACCTCTTCTGTTATaGAACTCTCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQGKERSLPQSPNAQTVQPLLL*NSQGSC
Trigger: GCAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTG...CACAGTCTGGGCATTGGGGCTCTGTGGGAGGCTCCTCTCTTTGCCTTGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCAACGATGAGCCCATCTaGGCACATCAGACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFNDEPI*AHQTAA
Trigger: TGCTGCCGTCTGATGTGCTCAGATGGGCTCATCGTT...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGAAGCGAAGTTCTCCCTaGCCCGGCTCAAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRKRSSP*PGSSPP
Trigger: GGGTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTT...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCGGAAGCTTGACCTaGATCGTGACATTCGCACGG +
Preference number: 4 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKSGSLT*IVTFAR
Trigger: CCGTGCGAATGTCACGATTCAGGTCAAGCTTCCGGA...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGACTGGACCGGGCGGCTaGCCAGGAAGTTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRTGPGG*PGSSDP
Trigger: TGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGT...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCACAGGAACTCCTCCGATaGCTGGCAGTAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSQELLR*LAVDGD
Trigger: ATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTG...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp GAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTCTGCTGCAGGACCGATGCTAGGGATGGAAAGCTaGTGTCCTTCATCTTGTACC +
Preference number: 4 (lower is better)
Translates to: EHGSGPAERPNVSAAGPMLGMES*CPSSCT
Trigger: GGTACAAGATGAAGGACAGCAGCTTTCCATCCCTAG...CATCGGTCCTGCAGCAGACACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCATCCCTCAAGCTCCTaGCTCCCGCAGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRHPSSS*LPQWTV
Trigger: CACTGTCCACTGCGGGAGGCAGGAGCTTGAGGGATG...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TGCGGCCCGAACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGAGAGGTTCATGGGAATaGAGAGCGCAGTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CGPNFTQSSGTRTDGQRLRGSWE*RAQSKE
Trigger: TTCTTTTGACTGCGCTCTGCATTCCCATGAACCTCT...CAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGTTCGGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TCCTGCAGGACATTCTCAATGGAAGCTGCTCGGGTCCCTTGCTGTGGTGACGACTCGTCCACCACAGCCTaGATGACTACTGGAAACACG +
Preference number: 4 (lower is better)
Translates to: SCRTFSMEAARVPCCGDDSSTTA*MTTGNT
Trigger: CGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGA...GTCGTCACCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp AGGACATTCTCAATGGAAGCTGCTCGGGTCCCTTGCTGTGGTGACGACGACTCACGTCGTCCGAGGGCTTaGTCTCCTGGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RTFSMEAARVPCCGDDDSRRPRA*SPGCSC
Trigger: ACAAGAACAACCAGGAGACCAAGCCCTCGGACGACG...TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAATGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAGATGGAGAGACCTCTaGCCCCGAAAGTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPRWRDL*PRKSGP
Trigger: GGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCAGAAGGTTCCAGTACTaGGAGGGACAGGTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFRRFQY*EGQVSR
Trigger: CCGACTCACCTGTCCCTCCCAGTACTGGAACCTTCT...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTGTAAAACACTCACCTaGGCCACCCTGGTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKCKTLT*ATLVEG
Trigger: GCCCTCTACCAGGGTGGCCCAGGTGAGTGTTTTACA...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGGACATTCTCAATGGAAGCTGCTCGGGTCCCTTGCTGTGGTGACGACGACTCAATTCTCAATGGAAGCTaGTCGGGTCCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTFSMEAARVPCCGDDDSILNGS*SGPLLW
Trigger: CCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAAT...TGAGTCGTCGTCACCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCACTCCCTTTGCCATCTaGGGCCCAGGAGGTTTACCT +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPTPFAI*GPGGLP
Trigger: AGGTAAACCTCCTGGGCCGCAGATGGCAAAGGGAGT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CGGGGACTCCCTAACTGTGCCAAATACGCTGTGTCCCTCTTGGGACAGACGATCGCATGTGTGAACATGTaGGTGAGCATGTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RGLPNCAKYAVSLLGQTIACVNM*VSMCKW
Trigger: CCACTTGCACATGCTCACGCACATGTTCACACATGC...GATCGTCTGTCCCAAGAGGGACACAGCGTATTTGGCACAGTTAGGGAGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACTCGGATGCCTGGTaGCACGCCACCCGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHHSDAW*HATRSY
Trigger: GTAGGAGCGGGTGGCGTGGCACCAGGCATCCGAGTG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAAGGCCACTGAATGCTaGCTGCTGGAAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPKATEC*LLEAAV
Trigger: CACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCAACAGAGGGACTCGCTaGGCTCAAGAAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFNRGTR*AQEDRG
Trigger: ACCTCTGTCTTCTTGAGCCCAGCGAGTCCCTCTGTT...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCACGCTGTGTCCCTCTTaGGACAGACGATCCCAGATC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPTLCPS*DRRSQI
Trigger: GATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ACTTCACGCAAAGCTCTGGCACCAGGACTGATGGCCAGAGGCTGGGGCCTTGGTATTTCTCTCCTCCCATaGAAAAGTGCGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TSRKALAPGLMARGWGLGISLLP*KSAKQS
Trigger: ACTTTGCTTCGCACTTTTTCATGGGAGGAGAGAAAT...ACCAAGGCCCCAGCCTCTGGCCATCAGTCCTGGTGCCAGAGCTTTGCGTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACTCTCACCACCACAGCCTGGATaGCTACTGGAAACACGCCCC +
Preference number: 4 (lower is better)
Translates to: VPCCGDDDSSTSSVMKLSPPQPG*LLETRP
Trigger: GGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGG...TGAGAGTTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCAGGGACCGCACTGTTaGAGGAGCAGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHQGPHC*RSRQSQ
Trigger: CTGGCTCTGCCTGCTCCTGCAACAGTGCGGTCCCTG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACTCCCTGGCAGGGGCCTaGCAAACAGAAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHSLAGA*QTEAPA
Trigger: TGCAGGGGCTTCTGTTTGGCAGGCCCCTGCCAGGGA...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACATGTGCGTGAGCATGTaGAAGTGGGCGTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHMCVSM*KWACIC
Trigger: ACAAATGCACGCCCACTTGCACATGCTCACGCACAT...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACTCAGACGGCAGCACATaGGAGTCCCAGCGGGCCACT +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHSDGST*ESQRAT
Trigger: AGTGGCCCGCTGGGACTCCCATGTGCTGCCGTCTGA...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCTTTTGGTGGCACTCCTaGAGCTGCCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPFWWHS*SCLLSL
Trigger: GAGAGAGAGAAGGCAGCTCCAGGAGTGCCACCAAAA...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GTCCCTTGCTGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACTCTCAGGTCCCTTGCTGTGGTaGCGACGACTCATCAACCTC +
Preference number: 4 (lower is better)
Translates to: VPCCGDDDSSTSSVMKLSGPLLW*RRLINL
Trigger: GAGGTTGATGAGTCGTCGTCACCACAGCAAGGGACC...TGAGAGTTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACAGCAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCCTGGAGGGGCCTTGTaGTGTCACCAAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHPGGAL*CHQSQH
Trigger: GTGCTGGCTTTGGTGACATCACAAGGCCCCTCCAGG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCGCATTCTTTCCCCATaGATTGTTAAAGCCACGACC +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHRILSP*IVKATT
Trigger: GGTCGTGGCTTTAACAATTCATGGGGAAAGAATGCG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGATTCTCAATGGAAGCTaGTCGGGTCCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRILNGS*SGPLLW
Trigger: CCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAAT...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACTCCCTGGGCCAGTCCTaGCACAGAAGCCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHSLGQS*HRSLRQ
Trigger: CTGTCTCAGGCTTCTGTGGCAGGACTGGCCCAGGGA...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp CCCCCACTGCCCCTGAACATCTGTGAAGATGGTGCTTCGACCACCAATCAGTTCATGCATGGGAACATGTaGAGGAGTATGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PPLPLNICEDGASTTNQFMHGNM*RSMCVC
Trigger: ACACACGCACATACTCCTGCACATGTTCCCATGCAT...GAACTGATTGGTGGTCGAAGCACCATCTTCACAGATGTTCAGGGGCAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCAAGGTTCTTACGGCTaGGTTAGGGTGGAACTCGGT +
Preference number: 4 (lower is better)
Translates to: RETQKGQFTVLFDQESPRQGSYG*VRVELG
Trigger: ACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTG...CCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACGAGCTTGGGAAGACGTaGTCCAGGGGCTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHELGKT*SRGSPN
Trigger: ATTGGGAGAGCCCCTGGATCACGTCTTCCCAAGCTC...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACACCCGGTCCACAATTTaGTTCTGCTTTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHTRSTI*FCFKGF
Trigger: GAAGCCTTTAAAGCAGAAGCAAATTGTGGACCGGGT...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp TCTAGGGGTATAATGGCTCAGGACAGGGGTCAACAGAGGGACTCGCTGGGCTCAAAAAGAGAAGAGAACTaGAAGGGGACATTCCAATGG +
Preference number: 4 (lower is better)
Translates to: SRGIMAQDRGQQRDSLGSKREEN*KGTFQW
Trigger: CCATTGGAATGTCCCCTTGCAGTTCTCTTCTCTTTT...TGAGCCCAGCGAGTCCCTCTGTTGACCCCTGTCCTGAGCCATTATACCCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACGATGCTCGGTCCGAGTaGACACACATGCATGGGAAC +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHDARSE*THMHGN
Trigger: GTTCCCATGCATGTGTGTGCACTCGGACCGAGCATC...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp GAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCACGGCCCAGATGCCTGAATAGGTaGTTTCTTCATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ETQKGQFTVLFDQESPRPRCLNR*FLHKEG
Trigger: CCCCTCTTTATGAAGAAATCACCTATTCAGGCATCT...GGGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACGTTCACTGTGCTCTTTaGTCAAGAGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHVHCAL*SRVTTA
Trigger: GGCCGTGGTGACTCTTGATCAAAGAGCACAGTGAAC...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACATTCTCAATGGAAGCTaGTCGGGTCCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHILNGS*SGPLLW
Trigger: CCACAGCAAGGGACCCGAGCAGCTTCCATTGAGAAT...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCCGAGTGCACACACATaGATGGGAACATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHPSAHT*MGTCAG
Trigger: TCCTGCACATGTTCCCATGCATGTGTGTGCACTCGG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACGCAGGACATTCTCAATaGAAGCTGCTCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHAGHSQ*KLLGSL
Trigger: AAGGGACCCGAGCAGCTTCCATTGAGAATGTCCTGC...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCAAGGTTCTTACGGCTaGGTTAGGGTGGAACTCGGT +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHQGSYG*VRVELG
Trigger: ACCGAGTTCCACCCTAACCCAGCCGTAAGAACCTTG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCAACCTCTTCTGTTATaGAACTCTCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHQPLLL*NSQGSC
Trigger: GCAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCCGTCTGAAAGGTGCTaGCTGTTTCAATCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHPSERC*LFQSRG
Trigger: ACCCCTAGATTGAAACAGTCAGCACCTTTCAGACGG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACAAGCTGCCGTCCATGTaGTTTTCAAAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHKLPSM*FSKAAK
Trigger: CTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTT...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS CCA 90 bp GGCCGGAACGGGAGCGGCGACAGCGGCGGGGTCCTCACGCGGACATaGCCCGGACCAGGCCGCACGGACGCTCGTCCACGGCCGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GRNGSGDSGGVLTRT*PGPGRTDARPRPRR
Trigger: CCTCCGCGGCCGTGGACGAGCGTCCGTGCGGCCTGGTCCGGGCCATGTCCGCGTGAGGACCCCGCCGCTGTCGCCGCTCCCGTTCCGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000415496.5
CDS-3UTR CAA 90 bp CTCGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: LGQALRVGSARRRWDRGWTARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...CCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGTGCTGTCGGGGGCCTaGCTCTGCGGCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVVLSGA*LCGLPF
Trigger: GAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp CTCGTCGTCCGAGGGTTCCCTGGGTTGAGGCGAGGCCCGGCCAGGTaGTCCGCTCCCGCCACGTGGAGCTGCTCCAGTTGTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LVVRGFPGLRRGPAR*SAPATWSCSSCPGP
Trigger: GGGCCCAGGACAACTGGAGCAGCTCCACGTGGCGGGAGCGGAGCACCTGGCCGGGCCTCGCCTCAACCCAGGGAACCCTCGGACGACGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587747.5
CDS-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAATARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGGCCCAGGCACTCCCTTaGCCATCTGCGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVAQALP*PSAAQE
Trigger: CTCCTGGGCCGCAGATGGCAAAGGGAGTGCCTGGGC...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS CCA 90 bp GCTCTGGGCCAGGACGGGGCTGAAGGACACGGGGGACAGGGCTCCTaGCTTCTTCCGCACCGCCCGGATCTGCAGGAGGGCCCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ALGQDGAEGHGGQGS*LLPHRPDLQEGPER
Trigger: CCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
ENST00000587747.5
ENST00000588994.5
ENST00000590790.5
ENST00000591673.1
CDS-3UTR CAA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: VATGGMQTGGRLTTGSGATARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp CGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATGTGGTACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: RGPCSAACPSGGCCPGCGTARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...ACCACATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp CTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGCCTCAGGGAGGGTGTGCTGTCGGGGGCCTaGCTCTGCGGCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LAQEADLMLGATVSLREGVLSGA*LCGLPF
Trigger: GAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC...ACCCTCCCTGAGGCTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGGCCCAGGCACTCCCTTaGCCATCTGCGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRAQALP*PSAAQE
Trigger: CTCCTGGGCCGCAGATGGCAAAGGGAGTGCCTGGGC...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCGCCCAGGCACTCCCTTaGCCATCTGCGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPAQALP*PSAAQE
Trigger: CTCCTGGGCCGCAGATGGCAAAGGGAGTGCCTGGGC...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGAGGCTGGAGTGGGCCTaGACCTCCCCAGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRRLEWA*TSPAPA
Trigger: TGCCGGAGCTGGGGAGGTCAAGGCCCACTCCAGCCT...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp AGGGGAGCTGATGCAGACAGGCCAGCGGGTGCCCCTCATACCCTCTaGCTCGGCCACCTGGCCTCGGGCCTTCCAAGGTGGCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RGADADRPAGAPHTL*LGHLASGLPRWPPG
Trigger: GCCAGGAGGCCACCTTGGAAGGCCCGAGGCCAGGTGGCCGAGGCAGAGGGTATGAGGGGCACCCGCTGGCCTGTCTGCATCAGCTCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp CATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGACAGCCCGGAGGCCGTaGAGCGCCTCGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: HADRRPAHNGVRSSPSAKTARRP*SASSSE
Trigger: CTCGCTGCTCGAGGCGCTCAACGGCCTCCGGGCTGT...CTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGAGTGCTGTCGGGGGCCTaGCTCTGCGGCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: AAAVQDVVDSREGTAGLGVLSGA*LCGLPF
Trigger: GAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC...TCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTGTGCTGTCGGGGGCCTaGCTCTGCGGCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSVLSGA*LCGLPF
Trigger: GAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp CGGCCAGGCTCTCAGAGTGGGGTCAGCTCGGCGGCGCTGGGATCGGGGCTGGGGAGAGCTGCACGCAGCTaGTGTGCCAAGACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RPGSQSGVSSAALGSGLGRAARS*CAKTLW
Trigger: CCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCT...CCCCAGCCCCGATCCCAGCGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTTGGCGTCCCTGGGGCTaGGGCAATGGTGCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCAWRPWG*GNGAGA
Trigger: TGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCA...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGGCTGGAGTGGGCCTaGACCTCCCCAGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: STAGSRPGGGPHARSHRERLEWA*TSPAPA
Trigger: TGCCGGAGCTGGGGAGGTCAAGGCCCACTCCAGCCT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp ACACCTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCTGTCGGCATCGTCTTaGTACCTCACCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TPAWPRAPQGWIQPWVTRLSASS*YLTSRR
Trigger: CCTGCGGCTGGTGAGGTACAAAGACGATGCCGACAG...CCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCACTGTCGGCATCGTCTTaGTACCTCACCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GHADRRPAHNGVRSSPSALSASS*YLTSRR
Trigger: CCTGCGGCTGGTGAGGTACAAAGACGATGCCGACAG...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCTGTAGCGAGGGGCTCTaGGGGCTGTATACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAACSEGL*GLYTAL
Trigger: CAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTACA...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCATCCCTTTTAGGTTTCTaGCTGGCCAGGGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GHADRRPAHNGVRSSPSASLLGF*LAREAG
Trigger: CCCCGCCTCCCTGGCCAGCAAGAAACCTAAAAGGGA...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000399577.9
CDS-3UTR CAA 90 bp GCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCGCACTGTTTCCTTCATaGACCGTGCCTGGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ATGGMQTGGRLTTGSGAAALFPS*TVPGAP
Trigger: GGGGGCTCCAGGCACGGTCAATGAAGGAAACAGTGC...GGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTAGAGCTGCACGCAGCTaGTGTGCCAAGACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCARAARS*CAKTLW
Trigger: CCAGAGGGTCTTGGCACACAAGCTGCGTGCAGCTCT...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CTGCGCCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATGGGACGCTGTCAGAGTaGCAGCCGGCAGATGGGGCA +
Preference number: 5 (lower is better)
Translates to: LRHPVGEGRPRPRRASPHGTLSE*QPADGA
Trigger: TGCCCCATCTGCCGGCTGCAACTCTGACAGCGTCCC...ATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGGCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS TCA 90 bp GACAAGAGTGCTCATCATGCTCCAGGCTCTGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGGCTCCTGGCTTCTTCCGCACCGCCC +
Preference number: 5 (lower is better)
Translates to: DKSAHHAPGSGPGRG*RTRGTGLLASSAPP
Trigger: GGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGCCTGGAGCATGATGAGCACTCTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000587747.5
ENST00000590790.5
ENST00000591673.1
CDS TCA 90 bp CGGCCAAGAAGCTCGGCCCTGAGAAAGGCTCCACCTGAGGGGAGCTaGTGCAGACAGGCCAGCGGGTGCCCCTCATACCCTCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RPRSSALRKAPPEGS*CRQASGCPSYPLPR
Trigger: CCGAGGCAGAGGGTATGAGGGGCACCCGCTGGCCTGTCTGCATCAGCTCCCCTCAGGTGGAGCCTTTCTCAGGGCCGAGCTTCTTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp GCTGTCGGGGGCCTTGCTCTGCGGCCTGCCCTTCTGGCGGCTGCTGTCCAGGATTGTAGCGAGGGGCTCTaGGGGCTGTATACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: AVGGLALRPALLAAAVQDCSEGL*GLYTAL
Trigger: CAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTACA...ATCCTGGACAGCAGCCGCCAGAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp GAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTTCGTCGTCCGAGGGCTaGGTCTCCTGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EVAQRPSLPAGTPFPRCASSSEG*VSWLFL
Trigger: CAAGAACAACCAGGAGACCAAGCCCTCGGACGACGA...AGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCATCGTCGTCCGAGGGCTaGGTCTCCTGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GHADRRPAHNGVRSSPSASSSEG*VSWLFL
Trigger: CAAGAACAACCAGGAGACCAAGCCCTCGGACGACGA...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp CTGCCTGGCCCAGGGCTCCGCAGGGGTGGATCCAGCCCTGGGTCACCAGGCCCAACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LPGPGLRRGGSSPGSPGPTHSLL*SLFSSS
Trigger: GGACGACGAGAACAGCGACAACAGCAACGAGTGTGT...TGGGCCTGGTGACCCAGGGCTGGATCCACCCCTGCGGAGCCCTGGGCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGACGAGGTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGCACACCACACACTCGTaGCTGTTGTCGCTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: GRGRPEAKPPGRDPIPQVHTTHS*LLSLFS
Trigger: CGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTG...CACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGACCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAGACAGGGACTGAGCTaGGGAAGACGTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: GHADRRPAHNGVRSSPSARQGLS*GRRDPG
Trigger: CCCTGGATCACGTCTTCCCAAGCTCAGTCCCTGTCT...TGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp GGCCTCCACCTTCTACACCAACGCACACAGGGTTTCGGCTGGGTCTaGCTGGGCCACGGAGGCTCCAGGTGGTTGTGTGCTGGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: GLHLLHQRTQGFGWV*LGHGGSRWLCAGPP
Trigger: AGGGGGACCAGCACACAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAAACCCTGTGTGCGTTGGTGTAGAAGGTGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CCA 90 bp GGTGGGACGCTGTCAGAGTTAGAGTGCTCATCATGCTCCAGGCTCTaGGCCAGGACGGGGCTGAAGGACACGGGGGACAGGGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GGTLSELECSSCSRL*ARTGLKDTGDRAPG
Trigger: GCCAGGAGCCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGCCTGGAGCATGATGAGCACTCTAACTCTGACAGCGTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415496.5
ENST00000586183.5
ENST00000588994.5
CDS-3UTR CAA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCTGTCGGCATCGTCTTaGTACCTCACCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSLSASS*YLTSRR
Trigger: CCTGCGGCTGGTGAGGTACAAAGACGATGCCGACAG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTGTAGCGAGGGGCTCTaGGGGCTGTATACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSCSEGL*GLYTAL
Trigger: CAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTACA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp CACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCCACACCACACACTCGTaGCTGTTGTCGCTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: HRGHADRRPAHNGVRSSPHTTHS*LLSLFS
Trigger: CGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTG...GGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTTCCCTTTTAGGTTTCTaGCTGGCCAGGGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSSLLGF*LAREAG
Trigger: CCCCGCCTCCCTGGCCAGCAAGAAACCTAAAAGGGA...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399577.9
CDS-3UTR CAA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGCACTGTTTCCTTCATaGACCGTGCCTGGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKALFPS*TVPGAP
Trigger: GGGGGCTCCAGGCACGGTCAATGAAGGAAACAGTGC...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GTCGCCCAGAGGCCAAGCCTCCCGGCCGGGACCCCATTCCCCAGGTGTGCTGCTGATGACCTTAGGAGTTaGAGACCAGCCCGGCCAACA +
Preference number: 5 (lower is better)
Translates to: VAQRPSLPAGTPFPRCAADDLRS*RPARPT
Trigger: TGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCATC...AGCAGCACACCTGGGGAATGGGGTCCCGGCCGGGAGGCTTGGCCTCTGGGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS CCA 90 bp ATATCCACACGCTGTGCACGCGTTCCTTTGCGACGGACACCGGGCTaGGCCTGTGTCCTGGCTACGGTGAGCAGCGCTGCACTGGACACC +
Preference number: 5 (lower is better)
Translates to: ISTRCARVPLRRTPG*ACVLATVSSAALDT
Trigger: GGTGTCCAGTGCAGCGCTGCTCACCGTAGCCAGGACACAGGCCCAGCCCGGTGTCCGTCGCAAAGGAACGCGTGCACAGCGTGTGGATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 90 bp TCCACCTTCTACACCAACGCACACAGGGTTTCGGCTGGGTCTGCCTaGGCCACGGAGGCTCCAGGTGGTTGTGTGCTGGTCCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: STFYTNAHRVSAGSA*ATEAPGGCVLVPLP
Trigger: AGGCAGGGGGACCAGCACACAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAAACCCTGTGTGCGTTGGTGTAGAAGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CCA 90 bp CGGAGTGGCCTCCACCTTCTACACCAACGCACACAGGGTTTCGGCTaGGTCTGCCTGGGCCACGGAGGCTCCAGGTGGTTGTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RSGLHLLHQRTQGFG*VCLGHGGSRWLCAG
Trigger: ACCAGCACACAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAAACCCTGTGTGCGTTGGTGTAGAAGGTGGAGGCCACTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS-3UTR CAA 90 bp CCACCCAGTGGGGGAGGGGCGTCCACGTCCTCGGAGAGCTTCTCCTCATCCTCTCTGTCGGCATCGTCTTaGTACCTCACCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PPSGGGASTSSESFSSSSLSASS*YLTSRR
Trigger: CCTGCGGCTGGTGAGGTACAAAGACGATGCCGACAG...AGAGGATGAGGAGAAGCTCTCCGAGGACGTGGACGCCCCTCCCCCACTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp TGGGAGCAGAGGGAGGAGGGTCACACTCGGATGCCTGGTGCCACGCCACCCGCTTCGTCGTCCGAGGGCTaGGTCTCCTGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: WEQREEGHTRMPGATPPASSSEG*VSWLFL
Trigger: CAAGAACAACCAGGAGACCAAGCCCTCGGACGACGA...AGCGGGTGGCGTGGCACCAGGCATCCGAGTGTGACCCTCCTCCCTCTGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp AACTCTCAGGGGAGCTGCTTTCCCGCAGGGCCAGCTCTGCGCCACCCAGTGGGGTCGTCGTCCGAGGGCTaGGTCTCCTGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NSQGSCFPAGPALRHPVGSSSEG*VSWLFL
Trigger: CAAGAACAACCAGGAGACCAAGCCCTCGGACGACGA...CCCCACTGGGTGGCGCAGAGCTGGCCCTGCGGGAAAGCAGCTCCCCTGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp GCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAATCGTCGTCCGAGGGCTaGGTCTCCTGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ACRQEAGSQRGPEQPLGKSSSEG*VSWLFL
Trigger: CAAGAACAACCAGGAGACCAAGCCCTCGGACGACGA...TTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp AAGGCCACTGAATGCTGGCTGCTGGAAGCAGCTGTGCCTCCGCCCCTCGGCCAGGCACTGTTTCCTTCATaGACCGTGCCTGGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: KATECWLLEAAVPPPLGQALFPS*TVPGAP
Trigger: GGGGGCTCCAGGCACGGTCAATGAAGGAAACAGTGC...CTGGCCGAGGGGCGGAGGCACAGCTGCTTCCAGCAGCCAGCATTCAGTGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTCCGTCTGCCTACATTTaGGTGGCACTCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSPSAYI*VALLEL
Trigger: CAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGG...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGATGGCGTCCCTGGGGCTaGGGCAATGGTGCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: CERTPSGQDARYSPLGTRWRPWG*GNGAGA
Trigger: TGCACCAGCACCATTGCCCAAGCCCCAGGGACGCCA...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GTGGCCACAGGGGGCATGCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCATACGCTGTGTCCCTCTaGGGACAGACGATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: VATGGMQTGGRLTTGSGAYAVSL*GQTIPD
Trigger: ATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTA...TGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGCATGCCCCCTGTGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp GAACATCTGACGGCCAAGAAGCTCGGCCCTGAGAAAGGCTCCACCTaGGGGGAGCTGATGCAGACAGGCCAGCGGGTGCCCCTCATACCC +
Preference number: 5 (lower is better)
Translates to: EHLTAKKLGPEKGST*GELMQTGQRVPLIP
Trigger: GGGTATGAGGGGCACCCGCTGGCCTGTCTGCATCAGCTCCCCTCAGGTGGAGCCTTTCTCAGGGCCGAGCTTCTTGGCCGTCAGATGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 90 bp GGCTCCTCTCTCCAAGGACGCGCGTCAGAGCCCCCGAAGCGCGTCTaGGAGGTCACGTACCGGCTTACTCGTCTATACCAACAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSSLQGRASEPPKRV*EVTYRLTRLYQQSR
Trigger: CCTGCTCTGTTGGTATAGACGAGTAAGCCGGTACGTGACCTCCCAGACGCGCTTCGGGGGCTCTGACGCGCGTCCTTGGAGAGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: STAGSRPGGGPHARSHRETHSLL*SLFSSS
Trigger: GGACGACGAGAACAGCGACAACAGCAACGAGTGTGT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GCGGCTGCTGTCCAGGATGTGGTCGATAGCCGCGAGGGGACAGCTGGCCTGGGAACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: AAAVQDVVDSREGTAGLGTHSLL*SLFSSS
Trigger: GGACGACGAGAACAGCGACAACAGCAACGAGTGTGT...TCCCAGGCCAGCTGTCCCCTCGCGGCTATCGACCACATCCTGGACAGCAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS-3UTR CAA 90 bp CTCGGCAAAGTCTGGGGAGCCGAGGGCTCCATGCTGCCAGCTCGGCCAGGCTCTACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LGKVWGAEGSMLPARPGSTHSLL*SLFSSS
Trigger: GGACGACGAGAACAGCGACAACAGCAACGAGTGTGT...AGAGCCTGGCCGAGCTGGCAGCATGGAGCCCTCGGCTCCCCAGACTTTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
CDS-3UTR CAA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTTACGCTGTGTCCCTCTaGGGACAGACGATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSYAVSL*GQTIPD
Trigger: ATCTGGGATCGTCTGTCCCAAGAGGGACACAGCGTA...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp AAGTCTCTGTGGATCTGGGCTAGTTCGTTCAGTCTGACTCCCGCGTaGGGGCGGGAGGCTGTAGGTGGCGCCCATCAGGACCCTGGCACA +
Preference number: 5 (lower is better)
Translates to: KSLWIWASSFSLTPA*GREAVGGAHQDPGT
Trigger: TGTGCCAGGGTCCTGATGGGCGCCACCTACAGCCTCCCGCCCTCACGCGGGAGTCAGACTGAACGAACTAGCCCAGATCCACAGAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS TCA 90 bp TGCAGCCCAGACGCACCCATTCAGTATGGCTGCTCTGTTTCTCAGTaGCCTGCCCCTGGCCATCTGGCCTCTAGGGGGCAGCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: CSPDAPIQYGCSVSQ*PAPGHLASRGQHQD
Trigger: GTCCTGGTGCTGCCCCCTAGAGGCCAGATGGCCAGGGGCAGGTCACTGAGAAACAGAGCAGCCATACTGAATGGGTGCGTCTGGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 90 bp AATGAAATGGCCCCGGGCAGGAAACACAGCAAGGCCATGCAGTGCTaGCCAAGGCGGGGCTCCAGAGGGTGTTTCCAAGAGGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NEMAPGRKHSKAMQC*PRRGSRGCFQEAGG
Trigger: GCCACCAGCCTCTTGGAAACACCCTCTGGAGCCCCGCCTTGGGCAGCACTGCATGGCCTTGCTGTGTTTCCTGCCCGGGGCCATTTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS-3UTR CAA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGATGTAGCGAGGGGCTCTaGGGGCTGTATACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CERTPSGQDARYSPLGTRCSEGL*GLYTAL
Trigger: CAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTACA...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCCACACCACACACTCGTaGCTGTTGTCGCTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: DRPPSPDGETSGPESQDPHTTHS*LLSLFS
Trigger: CGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTG...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGGTGCTGTCGGGGGCCTaGCTCTGCGGCCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKVLSGA*LCGLPF
Trigger: GAAGGGCAGGCCGCAGAGCAAGGCCCCCGACAGCAC...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GGCAGCAGTGGGCTCATGGCACAAAGGCAGCCCACGAGGGACTGTGTGCCAGGCGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAAT +
Preference number: 5 (lower is better)
Translates to: GSSGLMAQRQPTRDCVPGEEVWS*VTRPLN
Trigger: ATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTC...GCCTGGCACACAGTCCCTCGTGGGCTGCCTTTGTGCCATGAGCCCACTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAAGGCAGGACGATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVARQDDH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATCGTCCTGCCT...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCCGTCTGCCTACATTTaGGTGGCACTCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPPSAYI*VALLEL
Trigger: CAGCTCCAGGAGTGCCACCAAAATGTAGGCAGACGG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TCCACTGCTGGGTCTCGCCCAGGAGGCGGACCTCATGCTCGGAGCCACCGTGAGAGTTCACTGTGCTCTTaGATCAAGAGTCACCACGGC +
Preference number: 5 (lower is better)
Translates to: STAGSRPGGGPHARSHRESSLCS*IKSHHG
Trigger: GCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACT...CTCACGGTGGCTCCGAGCATGAGGTCCGCCTCCTGGGCGAGACCCAGCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp GTTTCCAAGAGGCTGGTGGCCATGACCCCCAAAGCGTCACACCCCTaGAGCTCCAGGCTGCACCCGAGACAGGACGTGACTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: VSKRLVAMTPKASHP*SSRLHPRQDVTANQ
Trigger: CTGATTTGCAGTCACGTCCTGTCTCGGGTGCAGCCTGGAGCTTCAGGGGTGTGACGCTTTGGGGGTCATGGCCACCAGCCTCTTGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS CCA 90 bp GGGACGCTGTCAGAGTTCCCTCTAGAAAGGAAAACACGGTCCGGGTaGCTCCGGAGTGGCCTCCACCTTCTACACCAACGCACACAGGGT +
Preference number: 5 (lower is better)
Translates to: GTLSEFPLERKTRSG*LRSGLHLLHQRTQG
Trigger: ACCCTGTGTGCGTTGGTGTAGAAGGTGGAGGCCACTCCGGAGCCACCCGGACCGTGTTTTCCTTTCTAGAGGGAACTCTGACAGCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS-3UTR CAA 90 bp TGTGAGCGGACGCCCTCAGGACAGGACGCAAGATACTCTCCCCTGGGCACCAGAACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CERTPSGQDARYSPLGTRTHSLL*SLFSSS
Trigger: GGACGACGAGAACAGCGACAACAGCAACGAGTGTGT...TCTGGTGCCCAGGGGAGAGTATCTTGCGTCCTGTCCTGAGGGCGTCCGCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp GACCGGCCGCCTAGTCCAGATGGAGAGACCTCTGGCCCCGAAAGTCAGGACCCCAGTTCACTGTGCTCTTaGATCAAGAGTCACCACGGC +
Preference number: 5 (lower is better)
Translates to: DRPPSPDGETSGPESQDPSSLCS*IKSHHG
Trigger: GCCGTGGTGACTCTTGATCAAAGAGCACAGTGAACT...GGGGTCCTGACTTTCGGGGCCAGAGGTCTCTCCATCTGGACTAGGCGGCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CCAGGGAGGGCACTGAGGCCGCGCAAACACGGCAGAGGACAAAAAGCAGCGACAGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAAT +
Preference number: 5 (lower is better)
Translates to: PGRALRPRKHGRGQKAATEEVWS*VTRPLN
Trigger: ATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTC...TGTCGCTGCTTTTTGTCCTCTGCCGTGTTTGCGCGGCCTCAGTGCCCTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp ATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGTCCACCTGGGCCTCCTGCCCTaGCCCTGGTTCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: MQSAVKRSEVLPDPAQVHLGLLP*PWFRFP
Trigger: AGGAAACCGGAACCAGGGCAAGGGCAGGAGGCCCAG...GTGGACTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp ATTAATGAAATGGCCCCGGGCAGGAAACACAGCAAGGCCATGCAGTaGTGCCCAAGGCGGGGCTCCAGAGGGTGTTTCCAAGAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: INEMAPGRKHSKAMQ*CPRRGSRGCFQEAG
Trigger: ACCAGCCTCTTGGAAACACCCTCTGGAGCCCCGCCTTGGGCAGCACTGCATGGCCTTGCTGTGTTTCCTGCCCGGGGCCATTTCATTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS CCA 90 bp GAGAAGCTGCCGTCCATGTGCTTTTCAAAGGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCCACCACTGCATCTCCTTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: EKLPSMCFSKAAKST*AWPVTSTTASPSST
Trigger: GGTGGACGAAGGAGATGCAGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS CCA 90 bp CGCCCAGCCTGGAAACAGTTATCGACTCTGAGGCTGAACACAGCCTaGTGGGAACATCTGACGGCCAAGAAGCTCGGCCCTGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: RPAWKQLSTLRLNTA*WEHLTAKKLGPEKG
Trigger: GCCTTTCTCAGGGCCGAGCTTCTTGGCCGTCAGATGTTCCCACCAGGCTGTGTTCAGCCTCAGAGTCGATAACTGTTTCCAGGCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 90 bp AGGACACAACCCATTCCAGGGCACGTGCCCACACCCAAGCTCAACTaGAATCCTGCCAGGAGCTCTGCCCCCTTTAGGGGTGATTTGGTG +
Preference number: 5 (lower is better)
Translates to: RTQPIPGHVPTPKLN*NPARSSAPFRGDLV
Trigger: CACCAAATCACCCCTAAAGGGGGCAGAGCTCCTGGCAGGATTCCAGTTGAGCTTGGGTGTGGGCACGTGCCCTGGAATGGGTTGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGTGTAGCGAGGGGCTCTaGGGGCTGTATACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVCSEGL*GLYTAL
Trigger: CAGGGCAGTATACAGCCCCAAGAGCCCCTCGCTACA...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CACCAATCAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACCACACCACACACTCGTaGCTGTTGTCGCTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: HQSVLFCRPPEFSGQGPHHTTHS*LLSLFS
Trigger: CGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTG...GTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTGATTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp CAGTTCTCTTCTGCAGGCCTCCTGAGTTCTCCGGGCAGGGACCGCACTGTTGCAGATGACCTTAGGAGTTaGAGACCAGCCCGGCCAACA +
Preference number: 5 (lower is better)
Translates to: QFSSAGLLSSPGRDRTVADDLRS*RPARPT
Trigger: TGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCATC...TGCAACAGTGCGGTCCCTGCCCGGAGAACTCAGGAGGCCTGCAGAAGAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp ACAGTATTAATGAAATGGCCCCGGGCAGGAAACACAGCAAGGCCATaGAGTGCTGCCCAAGGCGGGGCTCCAGAGGGTGTTTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: TVLMKWPRAGNTARP*SAAQGGAPEGVSKR
Trigger: CCTCTTGGAAACACCCTCTGGAGCCCCGCCTTGGGCAGCACTGCATGGCCTTGCTGTGTTTCCTGCCCGGGGCCATTTCATTAATACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS CCA 90 bp GAGAAGCTGCCGTCCATGTGCTTTTCAAAGGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCCACCACATCTCCTTCGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: EKLPSMCFSKAAKST*AWPVTSTTSPSSTT
Trigger: TGTGGTGGACGAAGGAGATGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGCCTTTGAAAAGCACATGGACGGCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000536343.5
ENST00000586183.5
ENST00000587145.5
ENST00000587747.5
ENST00000588994.5
ENST00000590457.5
CDS CCA 90 bp TGGCCAGTCACTTCCACCACTGCATCTCCTTCGTCCACCACAGCCTaGATGACTACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: WPVTSTTASPSSTTA*MTTGNTPRSRSKFS
Trigger: GCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGAAGGAGATGCAGTGGTGGAAGTGACTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS CCA 90 bp GAGCTTTTCCGGTTCCACAAACTCCCTGGGCAGGGAGGCCGGGACTaGGCAAGTGGAGCTGACGGGTTATATGAATCAGACACTAGCCTG +
Preference number: 5 (lower is better)
Translates to: ELFRFHKLPGQGGRD*ASGADGLYESDTSL
Trigger: CAGGCTAGTGTCTGATTCATATAACCCGTCAGCTCCACTTGCCCAGTCCCGGCCTCCCTGCCCAGGGAGTTTGTGGAACCGGAAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592256.5
CDS CCA 90 bp CCAGCCTGGAAACAGTTATCGACTCTGAGGCTGAACACAGCCTGGTaGGAACATCTGACGGCCAAGAAGCTCGGCCCTGAGAAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PAWKQLSTLRLNTAW*EHLTAKKLGPEKGS
Trigger: GGAGCCTTTCTCAGGGCCGAGCTTCTTGGCCGTCAGATGTTCCCACCAGGCTGTGTTCAGCCTCAGAGTCGATAACTGTTTCCAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp TTGTTAAAGCCACGACCGGAACACGGGAGTGGACCTGCTGAGCGTCCTAACGTGAGACAGGGACTGAGCTaGGGAAGACGTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLKPRPEHGSGPAERPNVRQGLS*GRRDPG
Trigger: CCCTGGATCACGTCTTCCCAAGCTCAGTCCCTGTCT...CACGTTAGGACGCTCAGCAGGTCCACTCCCGTGTTCCGGTCGTGGCTTTAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp CAGTCACTTCCACCACTGCATCTCCTTCGTCCACCACAGCCTGGATaGCTACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: QSLPPLHLLRPPQPG*LLETRPGPGQSSAR
Trigger: ACGAGCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGAAGGAGATGCAGTGGTGGAAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS GCA 90 bp GCCTTCGGGGACCGTGGCCCTGCTGGCACCTCGGTTTCTGACGTGTaGCTCTGTGATGGTGAGAGAATACATTTCTGCTGTTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: AFGDRGPAGTSVSDV*LCDGERIHFCCFKP
Trigger: TGGCTTGAAACAGCAGAAATGTATTCTCTCACCATCACAGAGGCACACGTCAGAAACCGAGGTGCCAGCAGGGCCACGGTCCCCGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 90 bp AGTTGCCAAGAATGGTCAGGACCCACACAGCCAAGCCTGGAAGCCTaGAGTCGGTCAACAAATGAGCTGGACAAAGCAGGCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SCQEWSGPTQPSLEA*SRSTNELDKAGRSR
Trigger: CCTGCTCCTGCCTGCTTTGTCCAGCTCATTTGTTGACCGACTCCAGGCTTCCAGGCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS TCA 90 bp TGGATGACTACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGCTaGGGAGAGAGTTGCCAAGAATGGTCAGGACCCACACAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: WMTTGNTPRSRSKFS*GESCQEWSGPTQPS
Trigger: GCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAACTCTCTCCTCAGCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 90 bp GAGGAGAGAGTTGCCAAGAATGGTCAGGACCCACACAGCCAAGCCTaGAAGCCTGGAGTCGGTCAACAAATGAGCTGGACAAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: EERVAKNGQDPHSQA*KPGVGQQMSWTKQA
Trigger: TGCCTGCTTTGTCCAGCTCATTTGTTGACCGACTCCAGGCTTCCAGGCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAACTCTCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 90 bp TTCCACCACTGCATCTCCTTCGTCCACCACAGCCTGGATGACTACTaGAAACACGCCCCGGTCCAGGTCAAAGTTCAGCTCGTCATCCTT +
Preference number: 5 (lower is better)
Translates to: FHHCISFVHHSLDDY*KHAPVQVKVQLVIL
Trigger: AAGGATGACGAGCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGAAGGAGATGCAGTGGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS-3UTR CAA 90 bp GCAGACAGGAGGCCGGCTCACAACGGGGTCCGGAGCAGCCCCTCGGCAAAGTCTCTGCTGTCCTTCATCTaGTACCAGTTACAAATATAT +
Preference number: 5 (lower is better)
Translates to: ADRRPAHNGVRSSPSAKSLLSFI*YQLQIY
Trigger: ATATATTTGTAACTGGTACAAGATGAAGGACAGCAG...AGACTTTGCCGAGGGGCTGCTCCGGACCCCGTTGTGAGCCGGCCTCCTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TGGGAATGCAGAGCGCAGTCAAAAGAAGCGAAGTTCTCCCTGACCCGGCTCAAGGATGACCTTAGGAGTTaGAGACCAGCCCGGCCAACA +
Preference number: 5 (lower is better)
Translates to: WECRAQSKEAKFSLTRLKDDLRS*RPARPT
Trigger: TGTTGGCCGGGCTGGTCTCAAACTCCTAAGGTCATC...CTTGAGCCGGGTCAGGGAGAACTTCGCTTCTTTTGACTGCGCTCTGCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp ATCAGCCAGCATCCAGCTCCAACACCACTTTCTTCTGTAGTGGCCTaGGCTGTGTTTCCGATGAAGTTCGGGTCCTACTCCACACCCAGC +
Preference number: 5 (lower is better)
Translates to: ISQHPAPTPLSSVVA*AVFPMKFGSYSTPS
Trigger: GCTGGGTGTGGAGTAGGACCCGAACTTCATCGGAAACACAGCTCAGGCCACTACAGAAGAAAGTGGTGTTGGAGCTGGATGCTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 90 bp CATCGGTGCTGCTTTCCTTTTTCTGGCCAAATAACAGGCACTGTGTaGATATCCACACGCTGTGCACGCGTTCCTTTGCGACGGACACCG +
Preference number: 5 (lower is better)
Translates to: HRCCFPFSGQITGTV*ISTRCARVPLRRTP
Trigger: CGGTGTCCGTCGCAAAGGAACGCGTGCACAGCGTGTGGATATCCACACAGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS-3UTR CAA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCTGGGCCTCCTGCCCTaGCCCTGGTTCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHLGLLP*PWFRFP
Trigger: AGGAAACCGGAACCAGGGCAAGGGCAGGAGGCCCAG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp TCATCCAAGAAGGCTGGAATCAAATCCACCATGTTCCGCAGCCGTTaGAGCCCAGACGCACCCATTCAGTATGGCTGCTCTGTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SSKKAGIKSTMFRSR*SPDAPIQYGCSVSQ
Trigger: CTGAGAAACAGAGCAGCCATACTGAATGGGTGCGTCTGGGCTGCAACGGCTGCGGAACATGGTGGATTTGATTCCAGCCTTCTTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCAGCAGCCACTGGAGAGCTCTGGATTCGGAATCCAGGGCCCCCTGCTGTCCTTCATCTaGTACCAGTTACAAATATAT +
Preference number: 5 (lower is better)
Translates to: WGKVQQPLESSGFGIQGPLLSFI*YQLQIY
Trigger: ATATATTTGTAACTGGTACAAGATGAAGGACAGCAG...GGGGCCCTGGATTCCGAATCCAGAGCTCTCCAGTGGCTGCTGCACCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCTGTCGGCATCGTCTTaGTACCTCACCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHLSASS*YLTSRR
Trigger: CCTGCGGCTGGTGAGGTACAAAGACGATGCCGACAG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS-3UTR CAA 90 bp TGTGGTGACGACGACTCATCAACCTCTTCTGTTATGAAACTCTCAGGGGAGCTGCACACCACACACTCGTaGCTGTTGTCGCTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: CGDDDSSTSSVMKLSGELHTTHS*LLSLFS
Trigger: CGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTG...CAGCTCCCCTGAGAGTTTCATAACAGAAGAGGTTGATGAGTCGTCGTCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS GCA 90 bp AGGTATGTTTCCAAAGTTCACCCACGGTGCAGCACGCATCGGTGCTaGTTTCCTTTTTCTGGCCAAATAACAGGCACTGTGTGGATATCC +
Preference number: 5 (lower is better)
Translates to: RYVSKVHPRCSTHRC*FPFSGQITGTVWIS
Trigger: GGATATCCACACAGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGTGGGTGAACTTTGGAAACATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 90 bp TCGGTTTCTGACGTGTGCCTCTGTGATGGTGAGAGAATACATTTCTaGTGTTTCAAGCCACGGTTAGAGGTCATTTGTCACAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SVSDVCLCDGERIHF*CFKPRLEVICHSHP
Trigger: GGGGTGGCTGTGACAAATGACCTCTAACCGTGGCTTGAAACAGCAGAAATGTATTCTCTCACCATCACAGAGGCACACGTCAGAAACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS-3UTR CAA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACGAGGAGGTGTGGAGCTaGGTGACAAGGCCACTGAAT +
Preference number: 5 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHEEVWS*VTRPLN
Trigger: ATTCAGTGGCCTTGTCACCAAGCTCCACACCTCCTC...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS GCA 90 bp TCTAGGTATGTTTCCAAAGTTCACCCACGGTGCAGCACGCATCGGTaGTGCTTTCCTTTTTCTGGCCAAATAACAGGCACTGTGTGGATA +
Preference number: 5 (lower is better)
Translates to: SRYVSKVHPRCSTHR*CFPFSGQITGTVWI
Trigger: TATCCACACAGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGTGGGTGAACTTTGGAAACATACCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 90 bp TGGATGACTACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGATaGAATTGCACAACAGGTGACCTTCTGTGTCTAGGTATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: WMTTGNTPRSRSKFR*NCTTGDLLCLGMFP
Trigger: TGGAAACATACCTAGACACAGAAGGTCACCTGTTGTGCAATTCCATCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 90 bp ACTACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGATGGAATTaGACAACAGGTGACCTTCTGTGTCTAGGTATGTTTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: TTGNTPRSRSKFRWN*TTGDLLCLGMFPKF
Trigger: GAACTTTGGAAACATACCTAGACACAGAAGGTCACCTGTTGTGCAATTCCATCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS-3UTR CAA 90 bp AGAAAAGGGAGACTCAGAAGGGACAGTTCACTGTGCTCTTTGATCAAGAGTCACCTGCTGTCCTTCATCTaGTACCAGTTACAAATATAT +
Preference number: 5 (lower is better)
Translates to: RKGRLRRDSSLCSLIKSHLLSFI*YQLQIY
Trigger: ATATATTTGTAACTGGTACAAGATGAAGGACAGCAG...GTGACTCTTGATCAAAGAGCACAGTGAACTGTCCCTTCTGAGTCTCCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
CDS TCA 90 bp AGATACAACACAAAATCTGCCATTTTAACTACGTTTCAACAGCGTTaGGTAAAGTACATCTATAATGTCATGCAACCGCCACCATCCATT +
Preference number: 5 (lower is better)
Translates to: RYNTKSAILTTFQQR*VKYIYNVMQPPPSI
Trigger: AATGGATGGTGGCGGTTGCATGACATTATAGATGTACTTTACTCAACGCTGTTGAAACGTAGTTAAAATGGCAGATTTTGTGTTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 72 bp GGGAGCGGCGACAGCGGCGGGGTCCTCACGCGGACATaGCCCGGACCAGGCCGCACGGACGCTCGTCCACGG +
Preference number: 6 (lower is better)
Translates to: GSGDSGGVLTRT*PGPGRTDARPR
Trigger: CCGTGGACGAGCGTCCGTGCGGCCTGGTCCGGGCCATGTCCGCGTGAGGACCCCGCCGCTGTCGCCGCTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000415496.5
ENST00000536343.5
ENST00000587747.5
CDS GCA 72 bp GACAGGGCTCCTGGCTTCTTCCGCACCGCCCGGATCTaGAGGAGGGCCCGGAAAGGCAGCCGGCAGATGGGG +
Preference number: 6 (lower is better)
Translates to: DRAPGFFRTARI*RRARKGSRQMG
Trigger: CCCCATCTGCCGGCTGCCTTTCCGGGCCCTCCTGCAGATCCGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
ENST00000587747.5
ENST00000588994.5
ENST00000590790.5
ENST00000591673.1
CDS CCA 72 bp CAGGACGGGGCTGAAGGACACGGGGGACAGGGCTCCTaGCTTCTTCCGCACCGCCCGGATCTGCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: QDGAEGHGGQGS*LLPHRPDLQEG
Trigger: GCCCTCCTGCAGATCCGGGCGGTGCGGAAGAAGCCAGGAGCCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
ENST00000587747.5
ENST00000588994.5
ENST00000590790.5
ENST00000591673.1
CDS CCA 72 bp TTCGGCTGGGTCTGCCTGGGCCACGGAGGCTCCAGGTaGTTGTGTGCTGGTCCCCCTGCCTGCTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: FGWVCLGHGGSR*LCAGPPACSLG
Trigger: CCCCAGGGAGCAGGCAGGGGGACCAGCACACAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CCA 72 bp TGGGGCTGGTGGTGGCGAGGCCGTGGGCCGTCTCCATaGAGGTGGGCCGTCCTGGCAGGTAGATGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: WGWWWRGRGPSP*RWAVLAGRCQQ
Trigger: CTGCTGACATCTACCTGCCAGGACGGCCCACCTCCATGGAGACGGCCCACGGCCTCGCCACCACCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262370.12
ENST00000588994.5
CDS GCA 72 bp TGGCCAAGAGCTCCCTGGCAGCACCGATGCCCTCCCTaGCTCAGCCATCAGCTCCAGCACGGGGCTGGATGC +
Preference number: 6 (lower is better)
Translates to: WPRAPWQHRCPP*LSHQLQHGAGC
Trigger: GCATCCAGCCCCGTGCTGGAGCTGATGGCTGAGGCAGGGAGGGCATCGGTGCTGCCAGGGAGCTCTTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585676.1
CDS GCA 72 bp CGGGCCTTCCAAGGTGGCCTCCTGGCCTCTCCACACTaGCAGCCTCAACACCCTTCCCTGGACGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: RAFQGGLLASPH*QPQHPSLDGSS
Trigger: CGAGGAGCCGTCCAGGGAAGGGTGTTGAGGCTGGCAGTGTGGAGAGGCCAGGAGGCCACCTTGGAAGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp GAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTGCAGCCGGCAGATGGGGC +
Preference number: 6 (lower is better)
Translates to: ERLEQRDGLVAR*DAVRVAAGRWG
Trigger: GCCCCATCTGCCGGCTGCAACTCTGACAGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536343.5
CDS CCA 72 bp CGCTGTGCACGCGTTCCTTTGCGACGGACACCGGGCTaGGCCTGTGTCCTGGCTACGGTGAGCAGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: RCARVPLRRTPG*ACVLATVSSAA
Trigger: TGCAGCGCTGCTCACCGTAGCCAGGACACAGGCCCAGCCCGGTGTCCGTCGCAAAGGAACGCGTGCACAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 72 bp CTCTGCCTCGGCCACCTGGCCTCGGGCCTTCCAAGGTaGCCTCCTGGCCTCTCCACACTGCCAGCCTCAACA +
Preference number: 6 (lower is better)
Translates to: LCLGHLASGLPR*PPGLSTLPAST
Trigger: TGTTGAGGCTGGCAGTGTGGAGAGGCCAGGAGGCCACCTTGGAAGGCCCGAGGCCAGGTGGCCGAGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS TCA 72 bp GCTCATCATGCTCCAGGCTCTGGGCCAGGACGGGGCTaGAGGACACGGGGGACAGGGCTCCTGGCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: AHHAPGSGPGRG*RTRGTGLLASS
Trigger: GGAAGAAGCCAGGAGCCCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGCCTGGAGCATGATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000586183.5
ENST00000587747.5
ENST00000588994.5
ENST00000590790.5
ENST00000591673.1
CDS TCA 72 bp ACGGCCAAGAAGCTCGGCCCTGAGAAAGGCTCCACCTaGGGGGAGCTGATGCAGACAGGCCAGCGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: TAKKLGPEKGST*GELMQTGQRVP
Trigger: GGGCACCCGCTGGCCTGTCTGCATCAGCTCCCCTCAGGTGGAGCCTTTCTCAGGGCCGAGCTTCTTGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 72 bp GGCCCGGCCAGGTGCTCCGCTCCCGCCACGTGGAGCTaGTCCAGTTGTCCTGGGCCCAGATGCCATAATGAA +
Preference number: 6 (lower is better)
Translates to: GPARCSAPATWS*SSCPGPRCHNE
Trigger: TTCATTATGGCATCTGGGCCCAGGACAACTGGAGCAGCTCCACGTGGCGGGAGCGGAGCACCTGGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587747.5
CDS GCA 72 bp CCACGGAGGCTCCAGGTGGTTGTGTGCTGGTCCCCCTaGCTGCTCCCTGGGGCACAAGGGAAGCCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: PRRLQVVVCWSP*LLPGAQGKPKE
Trigger: TTCCTTGGGCTTCCCTTGTGCCCCAGGGAGCAGGCAGGGGGACCAGCACACAACCACCTGGAGCCTCCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CCA 72 bp GGCTGTAGAGCACCCGGGGCTTGTCGCCGTCCTCGGTaGGGCTGTCGGCATCGTCTTTGTACCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: GCRAPGACRRPR*GCRHRLCTSPA
Trigger: GGCTGGTGAGGTACAAAGACGATGCCGACAGCCCCACCGAGGACGGCGACAAGCCCCGGGTGCTCTACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000536343.5
ENST00000586183.5
ENST00000587747.5
ENST00000588994.5
ENST00000590790.5
ENST00000591895.5
ENST00000593224.1
CDS CCA 72 bp TGGGGCTGGTGGTGGCGAGGCCGTGGGCCGTCTCCATaGAGGTGGGCCGTCCGGCTTACTCGTCTATACCAA +
Preference number: 6 (lower is better)
Translates to: WGWWWRGRGPSP*RWAVRLTRLYQ
Trigger: TTGGTATAGACGAGTAAGCCGGACGGCCCACCTCCATGGAGACGGCCCACGGCCTCGCCACCACCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586183.5
CDS TCA 72 bp AGCTCGGCCCTGAGAAAGGCTCCACCTGAGGGGAGCTaGTGCAGACAGGCCAGCGGGTGCCCCTCATACCCT +
Preference number: 6 (lower is better)
Translates to: SSALRKAPPEGS*CRQASGCPSYP
Trigger: AGGGTATGAGGGGCACCCGCTGGCCTGTCTGCATCAGCTCCCCTCAGGTGGAGCCTTTCTCAGGGCCGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 72 bp GCCCCGGGCAGGAAACACAGCAAGGCCATGCAGTGCTaGCCAAGGCGGGGCTCCAGAGGGTGTTTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: APGRKHSKAMQC*PRRGSRGCFQE
Trigger: CTCTTGGAAACACCCTCTGGAGCCCCGCCTTGGGCAGCACTGCATGGCCTTGCTGTGTTTCCTGCCCGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS GCA 72 bp GCCAGCCTCAACACCCTTCCCTGGACGGCTCCTCGCTaGTCCCAGCCCATCAGCCAGCATCCAGCTCCAACA +
Preference number: 6 (lower is better)
Translates to: ASLNTLPWTAPR*SQPISQHPAPT
Trigger: TGTTGGAGCTGGATGCTGGCTGATGGGCTGGGAGCAGCGAGGAGCCGTCCAGGGAAGGGTGTTGAGGCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp CCACAGCCCCATGAGACAGCCCTGTCCAGACCCACCTaGACCGGGCGGCTGCCCAGGAAGTTCAGATCCATG +
Preference number: 6 (lower is better)
Translates to: PQPHETALSRPT*TGRLPRKFRSM
Trigger: CATGGATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCTGGACAGGGCTGTCTCATGGGGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS TCA 72 bp GGGCTCCAGAGGGTGTTTCCAAGAGGCTGGTGGCCATaGCCCCCAAAGCGTCACACCCCTGAAGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GLQRVFPRGWWP*PPKRHTPEAPG
Trigger: GCCTGGAGCTTCAGGGGTGTGACGCTTTGGGGGTCATGGCCACCAGCCTCTTGGAAACACCCTCTGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS CCA 72 bp TACACCAACGCACACAGGGTTTCGGCTGGGTCTGCCTaGGCCACGGAGGCTCCAGGTGGTTGTGTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: YTNAHRVSAGSA*ATEAPGGCVLV
Trigger: GACCAGCACACAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAAACCCTGTGTGCGTTGGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CCA 72 bp CTCCACCTTCTACACCAACGCACACAGGGTTTCGGCTaGGTCTGCCTGGGCCACGGAGGCTCCAGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: LHLLHQRTQGFG*VCLGHGGSRWL
Trigger: CAACCACCTGGAGCCTCCGTGGCCCAGGCAGACCCAGCCGAAACCCTGTGTGCGTTGGTGTAGAAGGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS GCA 72 bp CTGTGTGGATATCCACACGCTGTGCACGCGTTCCTTTaGGACGGACACCGGGCTGGGCCTGTGTCCTGGCTA +
Preference number: 6 (lower is better)
Translates to: LCGYPHAVHAFL*DGHRAGPVSWL
Trigger: TAGCCAGGACACAGGCCCAGCCCGGTGTCCGTCGCAAAGGAACGCGTGCACAGCGTGTGGATATCCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 72 bp ATGAAATGGCCCCGGGCAGGAAACACAGCAAGGCCATaGAGTGCTGCCCAAGGCGGGGCTCCAGAGGGTGTT +
Preference number: 6 (lower is better)
Translates to: MKWPRAGNTARP*SAAQGGAPEGV
Trigger: AACACCCTCTGGAGCCCCGCCTTGGGCAGCACTGCATGGCCTTGCTGTGTTTCCTGCCCGGGGCCATTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588015.5
CDS GCA 72 bp CTGCCAGGAGCTCTGCCCCCTTTAGGGGTGATTTGGTaGCTGCTTGCCCTCATGGCTGGGATGCGGACTGCT +
Preference number: 6 (lower is better)
Translates to: LPGALPPLGVIW*LLALMAGMRTA
Trigger: AGCAGTCCGCATCCCAGCCATGAGGGCAAGCAGGCACCAAATCACCCCTAAAGGGGGCAGAGCTCCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 72 bp GGGGCAGCACCAGGACACAACCCATTCCAGGGCACGTaGCCACACCCAAGCTCAACTGGAATCCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GAAPGHNPFQGT*PHPSSTGILPG
Trigger: TCCTGGCAGGATTCCAGTTGAGCTTGGGTGTGGGCACGTGCCCTGGAATGGGTTGTGTCCTGGTGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp CTCCAAGGACGCGCGTCAGAGCCCCCGAAGCGCGTCTaGGAGGTCACGTACCGGCTTACTCGTCTATACCAA +
Preference number: 6 (lower is better)
Translates to: LQGRASEPPKRV*EVTYRLTRLYQ
Trigger: TTGGTATAGACGAGTAAGCCGGTACGTGACCTCCCAGACGCGCTTCGGGGGCTCTGACGCGCGTCCTTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399577.9
ENST00000415496.5
CDS CCA 72 bp CTGTCAGAGTTAGAGTGCTCATCATGCTCCAGGCTCTaGGCCAGGACGGGGCTGAAGGACACGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: LSELECSSCSRL*ARTGLKDTGDR
Trigger: CCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGCCTGGAGCATGATGAGCACTCTAACTCTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415496.5
ENST00000586183.5
ENST00000588994.5
CDS CCA 72 bp GAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTCGAGAGCTTTTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: ERLEQRDGLVAR*DAVRVRELFRF
Trigger: GAACCGGAAAAGCTCTCGAACTCTGACAGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592256.5
CDS CAA 72 bp CGCAGGTCGGACAGGCACACCACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCCGAGGGCTTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: RRSDRHTTHSLL*SLFSSSEGLVS
Trigger: GGAGACCAAGCCCTCGGACGACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTGCCTGTCCGACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000536343.5
ENST00000586183.5
ENST00000587145.5
ENST00000588015.5
ENST00000588994.5
ENST00000590790.5
ENST00000591673.1
CDS CAA 72 bp ACTGTGTGGATATCCACACGCTGTGCACGCGTTCCTTaGCGACGGACACCGGGCTGGGCCTGTGTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: TVWISTRCARVP*RRTPGWACVLA
Trigger: AGCCAGGACACAGGCCCAGCCCGGTGTCCGTCGCAAAGGAACGCGTGCACAGCGTGTGGATATCCACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CAA 72 bp CGCAGGTCGGACAGGCACACCACACACTCGTTGCTGTaGTCGCTGTTCTCGTCGTCCGAGGGTTCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: RRSDRHTTHSLL*SLFSSSEGSLG
Trigger: ACCCAGGGAACCCTCGGACGACGAGAACAGCGACAACAGCAACGAGTGTGTGGTGTGCCTGTCCGACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587747.5
CDS CAA 90 bp ATAACAGGCACTGTGTGGATATCCACACGCTGTGCACGCGTTCCTTaGCGACGGACACCGGGCTGGGCCTGTGTCCTGGCTACGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ITGTVWISTRCARVP*RRTPGWACVLATVS
Trigger: GCTCACCGTAGCCAGGACACAGGCCCAGCCCGGTGTCCGTCGCAAAGGAACGCGTGCACAGCGTGTGGATATCCACACAGTGCCTGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 72 bp TTAAAGGGACAAGAGTGCTCATCATGCTCCAGGCTCTaGGCCAGGACGGGGCTGAAGGACACGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: LKGQECSSCSRL*ARTGLKDTGDR
Trigger: CCTGTCCCCCGTGTCCTTCAGCCCCGTCCTGGCCCAGAGCCTGGAGCATGATGAGCACTCTTGTCCCTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000587747.5
ENST00000590790.5
ENST00000591673.1
CDS CCA 72 bp GAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTAGAGTGCTCATCATGCTC +
Preference number: 6 (lower is better)
Translates to: ERLEQRDGLVAR*DAVRVRVLIML
Trigger: GAGCATGATGAGCACTCTAACTCTGACAGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415496.5
ENST00000586183.5
ENST00000588994.5
CDS CCA 72 bp ATCCTGCCAGGAGCTCTGCCCCCTTTAGGGGTGATTTaGTGCCTGCTTGCCCTCATGGCTGGGATGCGGACT +
Preference number: 6 (lower is better)
Translates to: ILPGALPPLGVI*CLLALMAGMRT
Trigger: AGTCCGCATCCCAGCCATGAGGGCAAGCAGGCACCAAATCACCCCTAAAGGGGGCAGAGCTCCTGGCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CAA 72 bp AATCCTGCCAGGAGCTCTGCCCCCTTTAGGGGTGATTaGGTGCCTGCTTGCCCTCATGGCTGGGATGCGGAC +
Preference number: 6 (lower is better)
Translates to: NPARSSAPFRGD*VPACPHGWDAD
Trigger: GTCCGCATCCCAGCCATGAGGGCAAGCAGGCACCAAATCACCCCTAAAGGGGGCAGAGCTCCTGGCAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp GAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTCCCTCTAGAAAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: ERLEQRDGLVAR*DAVRVPSRKEN
Trigger: GTTTTCCTTTCTAGAGGGAACTCTGACAGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CAA 72 bp CCTGATGACCTCCTGTCCACTCTGTTCTTTGGGGGATaGAGACTCCCCCACCCTCAGAGGGTGGCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: PDDLLSTLFFGG*RLPHPQRVAKS
Trigger: GCTCTTGGCCACCCTCTGAGGGTGGGGGAGTCTCAATCCCCCAAAGAACAGAGTGGACAGGAGGTCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585676.1
CDS CAA 90 bp TGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGCTGAGGAGAGAGTaGCCAAGAATGGTCAGGACCCACACAGCCAAGCCTGGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: WKHAPVQVKVQLRRE*PRMVRTHTAKPGSL
Trigger: CAGGCTTCCAGGCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAACTCTCTCCTCAGCTGAACTTTGACCTGGACCGGGGCGTGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS TCA 72 bp CCACCACTGCATCTCCTTCGTCCACCACAGCCTGGATaGCTACTGGAAACACGCCCCGGTCCAGGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: PPLHLLRPPQPG*LLETRPGPGQS
Trigger: ACTTTGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGAAGGAGATGCAGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS TCA 72 bp CTGATGACCTCCTGTCCACTCTGTTCTTTGGGGGATTaGGACTCCCCCACCCTCAGAGGGTGGCCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: LMTSCPLCSLGD*DSPTLRGWPRA
Trigger: AGCTCTTGGCCACCCTCTGAGGGTGGGGGAGTCTCAATCCCCCAAAGAACAGAGTGGACAGGAGGTCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585676.1
CDS CCA 72 bp CCGTCCATGTGCTTTTCAAAGGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCCACCACATCTCCTTCG +
Preference number: 6 (lower is better)
Translates to: PSMCFSKAAKST*AWPVTSTTSPS
Trigger: CGAAGGAGATGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGCCTTTGAAAAGCACATGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000536343.5
ENST00000586183.5
ENST00000587145.5
ENST00000587747.5
ENST00000588994.5
ENST00000590457.5
CDS CCA 72 bp ACTTCCACCACTGCATCTCCTTCGTCCACCACAGCCTaGATGACTACTGGAAACACGCCCCGGTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TSTTASPSSTTA*MTTGNTPRSRS
Trigger: TGACCTGGACCGGGGCGTGTTTCCAGTAGTCATCCAGGCTGTGGTGGACGAAGGAGATGCAGTGGTGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS CCA 72 bp CCGTCCATGTGCTTTTCAAAGGCAGCCAAGAGCACGTaGGCGTGGCCAGTCACTTCCACCACTGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: PSMCFSKAAKST*AWPVTSTTASP
Trigger: AGGAGATGCAGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGCCTTTGAAAAGCACATGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590790.5
CDS CCA 72 bp TCAGAGTTCCCTCTAGAAAGGAAAACACGGTCCGGGTaGCTCCGGAGTGGCCTCCACCTTCTACACCAACGC +
Preference number: 6 (lower is better)
Translates to: SEFPLERKTRSG*LRSGLHLLHQR
Trigger: GCGTTGGTGTAGAAGGTGGAGGCCACTCCGGAGCCACCCGGACCGTGTTTTCCTTTCTAGAGGGAACTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CAA 72 bp GCCCCGGTCCAGGTCAAAGTTCAGCTGAGGAGAGAGTaGCCAAGAATGGTCAGGACCCACACAGCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: APVQVKVQLRRE*PRMVRTHTAKP
Trigger: AGGCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAACTCTCTCCTCAGCTGAACTTTGACCTGGACCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 72 bp ATGTGCTTTTCAAAGGCAGCCAAGAGCACGTGGGCGTaGCCAGTCACTTCCACCACATCTCCTTCGTCCACC +
Preference number: 6 (lower is better)
Translates to: MCFSKAAKSTWA*PVTSTTSPSST
Trigger: GGTGGACGAAGGAGATGTGGTGGAAGTGACTGGCCACGCCCACGTGCTCTTGGCTGCCTTTGAAAAGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000415496.5
ENST00000536343.5
ENST00000586183.5
ENST00000587145.5
ENST00000587747.5
ENST00000588994.5
ENST00000590457.5
CDS CCA 72 bp GAGCGCCTCGAGCAGCGAGATGGGCTCGTAGCCAGGTaGGACGCTGTCAGAGTTTGTTTCCCTTTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: ERLEQRDGLVAR*DAVRVCFPFRF
Trigger: AAACCTAAAAGGGAAACAAACTCTGACAGCGTCCCACCTGGCTACGAGCCCATCTCGCTGCTCGAGGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000587747.5
CDS CCA 72 bp GAATGGTCAGGACCCACACAGCCAAGCCTGGAAGCCTaGAGTCGGTCAACAAATGAGCTGGACAAAGCAGGC +
Preference number: 6 (lower is better)
Translates to: EWSGPTQPSLEA*SRSTNELDKAG
Trigger: GCCTGCTTTGTCCAGCTCATTTGTTGACCGACTCCAGGCTTCCAGGCTTGGCTGTGTGGGTCCTGACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 72 bp TCTAGAAAGGAAAACACGGTCCGGGTGGCTCCGGAGTaGCCTCCACCTTCTACACCAACGCACACAGGGTTT +
Preference number: 6 (lower is better)
Translates to: SRKENTVRVAPE*PPPSTPTHTGF
Trigger: AAACCCTGTGTGCGTTGGTGTAGAAGGTGGAGGCCACTCCGGAGCCACCCGGACCGTGTTTTCCTTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588111.1
CDS CAA 72 bp GAAGGCTGGAATCAAATCCACCATGTTCCGCAGCCGTaGCAGCCCAGACGCACCCATTCAGTATGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: EGWNQIHHVPQP*QPRRTHSVWLL
Trigger: GAGCAGCCATACTGAATGGGTGCGTCTGGGCTGCAACGGCTGCGGAACATGGTGGATTTGATTCCAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 72 bp AAGGCTGGAATCAAATCCACCATGTTCCGCAGCCGTTaGAGCCCAGACGCACCCATTCAGTATGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: KAGIKSTMFRSR*SPDAPIQYGCS
Trigger: AGAGCAGCCATACTGAATGGGTGCGTCTGGGCTGCAACGGCTGCGGAACATGGTGGATTTGATTCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp GTTGCCAAGAATGGTCAGGACCCACACAGCCAAGCCTaGAAGCCTGGAGTCGGTCAACAAATGAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: VAKNGQDPHSQA*KPGVGQQMSWT
Trigger: TGTCCAGCTCATTTGTTGACCGACTCCAGGCTTCCAGGCTTGGCTGTGTGGGTCCTGACCATTCTTGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590457.5
CDS CCA 72 bp AAACAGTTATCGACTCTGAGGCTGAACACAGCCTGGTaGGAACATCTGACGGCCAAGAAGCTCGGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: KQLSTLRLNTAW*EHLTAKKLGPE
Trigger: CTCAGGGCCGAGCTTCTTGGCCGTCAGATGTTCCCACCAGGCTGTGTTCAGCCTCAGAGTCGATAACTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp TGGAAACAGTTATCGACTCTGAGGCTGAACACAGCCTaGTGGGAACATCTGACGGCCAAGAAGCTCGGCCCT +
Preference number: 6 (lower is better)
Translates to: WKQLSTLRLNTA*WEHLTAKKLGP
Trigger: AGGGCCGAGCTTCTTGGCCGTCAGATGTTCCCACCAGGCTGTGTTCAGCCTCAGAGTCGATAACTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CCA 72 bp ACCTTACCCCCAAATCTGAGCCCTGTGTACTTTCCATaGCAGCACCCAGCCGGGTTTAGAAGTCTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: TLPPNLSPVYFP*QHPAGFRSLCG
Trigger: TCCACAGAGACTTCTAAACCCGGCTGGGTGCTGCCATGGAAAGTACACAGGGCTCAGATTTGGGGGTAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CAA 72 bp GGGACGCTGTCAGAGTTTGTTTCCCTTTTAGGTTTCTaGCTGGCCAGGGAGGCGGGGTGCGGCTTTGATTTT +
Preference number: 6 (lower is better)
Translates to: GTLSEFVSLLGF*LAREAGCGFDF
Trigger: AAAATCAAAGCCGCACCCCGCCTCCCTGGCCAGCAAGAAACCTAAAAGGGAAACAAACTCTGACAGCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262370.12
ENST00000399577.9
ENST00000587747.5
ENST00000591673.1
CDS CAA 90 bp GTCATCCAAGAAGGCTGGAATCAAATCCACCATGTTCCGCAGCCGTaGCAGCCCAGACGCACCCATTCAGTATGGCTGCTCTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: VIQEGWNQIHHVPQP*QPRRTHSVWLLCFS
Trigger: TGAGAAACAGAGCAGCCATACTGAATGGGTGCGTCTGGGCTGCAACGGCTGCGGAACATGGTGGATTTGATTCCAGCCTTCTTGGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS TCA 72 bp TGTCCTGGGCCCAGATGCCATAATGAAGCGGGCCTGTaGGACTTTCCAAGAGATCTTGGTCTCCTGGTTGTT +
Preference number: 6 (lower is better)
Translates to: CPGPRCHNEAGL*DFPRDLGLLVV
Trigger: AACAACCAGGAGACCAAGATCTCTTGGAAAGTCTCACAGGCCCGCTTCATTATGGCATCTGGGCCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587747.5
CDS TCA 72 bp CATCCAGCTCCAACACCACTTTCTTCTGTAGTGGCCTaGGCTGTGTTTCCGATGAAGTTCGGGTCCTACTCC +
Preference number: 6 (lower is better)
Translates to: HPAPTPLSSVVA*AVFPMKFGSYS
Trigger: GGAGTAGGACCCGAACTTCATCGGAAACACAGCTCAGGCCACTACAGAAGAAAGTGGTGTTGGAGCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS GCA 72 bp TCCAAAGTTCACCCACGGTGCAGCACGCATCGGTGCTaGTTTCCTTTTTCTGGCCAAATAACAGGCACTGTG +
Preference number: 6 (lower is better)
Translates to: SKVHPRCSTHRC*FPFSGQITGTV
Trigger: CACAGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGTGGGTGAACTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 72 bp ACGGTGCAGCACGCATCGGTGCTGCTTTCCTTTTTCTaGCCAAATAACAGGCACTGTGTGGATATCCACACG +
Preference number: 6 (lower is better)
Translates to: TVQHASVLLSFF*PNNRHCVDIHT
Trigger: CGTGTGGATATCCACACAGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 72 bp GTTTCCAAAGTTCACCCACGGTGCAGCACGCATCGGTaGTGCTTTCCTTTTTCTGGCCAAATAACAGGCACT +
Preference number: 6 (lower is better)
Translates to: VSKVHPRCSTHR*CFPFSGQITGT
Trigger: AGTGCCTGTTATTTGGCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGTGGGTGAACTTTGGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 72 bp TCTGTGTCTAGGTATGTTTCCAAAGTTCACCCACGGTaGAGCACGCATCGGTGCTGCTTTCCTTTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: SVSRYVSKVHPR*STHRCCFPFSG
Trigger: GCCAGAAAAAGGAAAGCAGCACCGATGCGTGCTGCACCGTGGGTGAACTTTGGAAACATACCTAGACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS CCA 72 bp ACTGGAAACACGCCCCGGTCCAGGTCAAAGTTCAGATaGAATTGCACAACAGGTGACCTTCTGTGTCTAGGT +
Preference number: 6 (lower is better)
Translates to: TGNTPRSRSKFR*NCTTGDLLCLG
Trigger: ACCTAGACACAGAAGGTCACCTGTTGTGCAATTCCATCTGAACTTTGACCTGGACCGGGGCGTGTTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 72 bp AACACGCCCCGGTCCAGGTCAAAGTTCAGATGGAATTaGACAACAGGTGACCTTCTGTGTCTAGGTATGTTT +
Preference number: 6 (lower is better)
Translates to: NTPRSRSKFRWN*TTGDLLCLGMF
Trigger: AAACATACCTAGACACAGAAGGTCACCTGTTGTGCAATTCCATCTGAACTTTGACCTGGACCGGGGCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587145.5
CDS GCA 72 bp GACGTGTGCCTCTGTGATGGTGAGAGAATACATTTCTaGTGTTTCAAGCCACGGTTAGAGGTCATTTGTCAC +
Preference number: 6 (lower is better)
Translates to: DVCLCDGERIHF*CFKPRLEVICH
Trigger: GTGACAAATGACCTCTAACCGTGGCTTGAAACAGCAGAAATGTATTCTCTCACCATCACAGAGGCACACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615397.1
CDS CAA 72 bp GCAGATGTAATCAAGTTAAGAGGAGGTCATACTGGATaGAGGGGCTCTAAATCCAGTGACTGGTTCTTAACA +
Preference number: 6 (lower is better)
Translates to: ADVIKLRGGHTG*RGSKSSDWFLT
Trigger: TGTTAAGAACCAGTCACTGGATTTAGAGCCCCTCAATCCAGTATGACCTCCTCTTAACTTGATTACATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615397.1