RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGMT (Homo sapiens)

Ensembl gene IDs: ENSG00000170430

Ensembl transcript IDs: ENST00000306010.8, ENST00000462672.1, ENST00000482547.1, ENST00000482653.1, ENST00000651593.1

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGAGGCAGCCTGCCTGCAGCGTGCATGCCTGCCGGTCCAGGTGTaGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGC +
Preference number: 1 (lower is better)
Translates to: AEAACLQRACLPVQV*LQRAACRVSGSTGS
Trigger: GCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AGGCAGCCTGCCTGCAGCGTGCATGCCTGCCGGTCCAGGTGTGGCTaGAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATC +
Preference number: 1 (lower is better)
Translates to: RQPACSVHACRSRCG*RGRPVGSQGAQGAI
Trigger: GATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TGCTGGGGTCTCCACAGCACACCGCACGGCTCTGGTGCCCTCTGTTaGAAAGCACTCGCGGCTCGCACACCCGGGCCACCAGGCCCCAAG +
Preference number: 1 (lower is better)
Translates to: CWGLHSTPHGSGALC*KALAARTPGPPGPK
Trigger: CTTGGGGCCTGGTGGCCCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp ATGGGACCCAAACAGCGGAGGCAGCCTGCCTGCAGCGTGCATGCCTaGCGGTCCAGGTGTGGCTGCAGAGGGCGGCCTGTAGGGTCTCAG +
Preference number: 1 (lower is better)
Translates to: MGPKQRRQPACSVHA*RSRCGCRGRPVGSQ
Trigger: CTGAGACCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TTGGACGGCTTTGACGGGCAGGTCCCCTGCCACCAGGAGCTGACCTaGATTCTGGGGGCTCGGCCCTCGCTGGCTGCAGTCATGTGGCCC +
Preference number: 1 (lower is better)
Translates to: LDGFDGQVPCHQELT*ILGARPSLAAVMWP
Trigger: GGGCCACATGACTGCAGCCAGCGAGGGCCGAGCCCCCAGAATCCAGGTCAGCTCCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTaGCTGCGAGGTGGCTGTCGTGCACGGCGGGTCTCGGTGTCGGCC +
Preference number: 1 (lower is better)
Translates to: LSSLWKQGSVVRRSE*LRGGCRARRVSVSA
Trigger: GGCCGACACCGAGACCCGCCGTGCACGACAGCCACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp GCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTaGGGGTGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAG +
Preference number: 1 (lower is better)
Translates to: ALAGPGQRLWQPSVA*GCQTAPSWAVAQHE
Trigger: CTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR GCA 90 bp AGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCAGCCTGCCTaGAGCGTGCATGCCTGCCGGTCCAGGTGTGGCTGCAGAGGGCGG +
Preference number: 1 (lower is better)
Translates to: RLPSFMGPKQRRQPA*SVHACRSRCGCRGR
Trigger: CCGCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GCATGGTCCGAGCAGGCCCACCTGTGCTCCCAGGCCACACGGATTTaGTGGCTCACCTTGGACGGCTTTGACGGGCAGGTCCCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: AWSEQAHLCSQATRI*WLTLDGFDGQVPCH
Trigger: GTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTGCTCGGACCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp CATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCTaGGAGGTGGCTGTCGTGCACGGCGGGTCTCGGTGTCGGCCTTCA +
Preference number: 1 (lower is better)
Translates to: HLSGNRGAWSAGLSG*EVAVVHGGSRCRPS
Trigger: TGAAGGCCGACACCGAGACCCGCCGTGCACGACAGCCACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp GTGGGGATGGGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATaGGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTG +
Preference number: 1 (lower is better)
Translates to: VGMGQGQLSSVDGLG*ALAGPGQRLWQPSV
Trigger: CACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCCCATCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR CCA 90 bp GCCGCCCAGCCACCCTCCTTCAAATCCATCCTCCAGCAGGGGAAGTaGTGCTGGGGTCTCCACAGCACACCGCACGGCTCTGGTGCCCTC +
Preference number: 1 (lower is better)
Translates to: AAQPPSFKSILQQGK*CWGLHSTPHGSGAL
Trigger: GAGGGCACCAGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCACCACTTCCCCTGCTGGAGGATGGATTTGAAGGAGGGTGGCTGGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TGGTCCGAGCAGGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTaGCTCACCTTGGACGGCTTTGACGGGCAGGTCCCCTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: WSEQAHLCSQATRIC*LTLDGFDGQVPCHQ
Trigger: CTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTGCTCGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp TCACCTTGGACGGCTTTGACGGGCAGGTCCCCTGCCACCAGGAGCTaGCCTGGATTCTGGGGGCTCGGCCCTCGCTGGCTGCAGTCATGT +
Preference number: 1 (lower is better)
Translates to: SPWTALTGRSPATRS*PGFWGLGPRWLQSC
Trigger: ACATGACTGCAGCCAGCGAGGGCCGAGCCCCCAGAATCCAGGTCAGCTCCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp GACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTaGGTGGCTGCGAGGTGGCTGTCGTGCACGGCGGGTCTCGGTGTC +
Preference number: 1 (lower is better)
Translates to: DSLISLETGERGPPV*VAARWLSCTAGLGV
Trigger: GACACCGAGACCCGCCGTGCACGACAGCCACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp TGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCAGCCTaGCTGCAGCGTGCATGCCTGCCGGTCCAGGTGTGGCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: WEASIVHGTQTAEAA*LQRACLPVQVWLQR
Trigger: CCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AACGGCGCTGCAGCTTGGAGGCAGAGCGGCTCTAGGCGACCCGCGTaGTGGCTTTTCATGTCGGCCTCGGCAGAGCTTGTCCTTGGAGCG +
Preference number: 1 (lower is better)
Translates to: NGAAAWRQSGSRRPA*WLFMSASAELVLGA
Trigger: CGCTCCAAGGACAAGCTCTGCCGAGGCCGACATGAAAAGCCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGCTGCAGCGCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GGTGAAGTCCGAGCTGGCGCCACCGCCCATGGTCACAGCTACGGGTaGATGGACAGCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGG +
Preference number: 1 (lower is better)
Translates to: GEVRAGATAHGHSYG*MDSQGEQAADETGR
Trigger: CCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGCTGTCCATGCACCCGTAGCTGTGACCATGGGCGGTGGCGCCAGCTCGGACTTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp GGCGCTGCAGCTTGGAGGCAGAGCGGCTCTAGGCGACCCGCGTGCTaGCTTTTCATGTCGGCCTCGGCAGAGCTTGTCCTTGGAGCGGTA +
Preference number: 1 (lower is better)
Translates to: GAAAWRQSGSRRPAC*LFMSASAELVLGAV
Trigger: TACCGCTCCAAGGACAAGCTCTGCCGAGGCCGACATGAAAAGCCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGCTGCAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp GTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTaGCGGGCAGGTCCCCTGCCACCAGGAGCTGACCTGGATTCTGGG +
Preference number: 1 (lower is better)
Translates to: VLPGHTDLLAHLGRL*RAGPLPPGADLDSG
Trigger: CCCAGAATCCAGGTCAGCTCCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GCTTGTCCTTGGAGCGGTACACGGCCCCGCCGGTTTGAGCCCTGCTaGTGCGGCTGTCAGAGGGAACCTCCGGGCATCTATCAAGCCTGT +
Preference number: 1 (lower is better)
Translates to: ACPWSGTRPRRFEPC*CGCQREPPGIYQAC
Trigger: ACAGGCTTGATAGATGCCCGGAGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AGAGCTTGTCCTTGGAGCGGTACACGGCCCCGCCGGTTTGAGCCCTaGTGCTGCGGCTGTCAGAGGGAACCTCCGGGCATCTATCAAGCC +
Preference number: 1 (lower is better)
Translates to: RACPWSGTRPRRFEP*CCGCQREPPGIYQA
Trigger: GGCTTGATAGATGCCCGGAGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp GTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCTTaGGATGAGAGGTCCCTGTCCCTTCCTACCTGCTGCCCAGAGCAC +
Preference number: 1 (lower is better)
Translates to: VLTGPWSLRALWGSP*DERSLSLPTCCPEH
Trigger: GTGCTCTGGGCAGCAGGTAGGAAGGGACAGGGACCTCTCATCTCAAGGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AAGCACTCGCGGCTCGCACACCCGGGCCACCAGGCCCCAAGCTGCTaGCTTGGAGAGCCAGAAGCTTCTGTTCTGTTCATGCAGAGGGGA +
Preference number: 1 (lower is better)
Translates to: KHSRLAHPGHQAPSC*LGEPEASVLFMQRG
Trigger: TCCCCTCTGCATGAACAGAACAGAAGCTTCTGGCTCTCCAAGGCAGCAGCTTGGGGCCTGGTGGCCCGGGTGTGCGAGCCGCGAGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GGAAAGCACTCGCGGCTCGCACACCCGGGCCACCAGGCCCCAAGCTaGTGCCTTGGAGAGCCAGAAGCTTCTGTTCTGTTCATGCAGAGG +
Preference number: 1 (lower is better)
Translates to: GKHSRLAHPGHQAPS*CLGEPEASVLFMQR
Trigger: CCTCTGCATGAACAGAACAGAAGCTTCTGGCTCTCCAAGGCAGCAGCTTGGGGCCTGGTGGCCCGGGTGTGCGAGCCGCGAGTGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTaGACCAAGGGCATGGTCCGAGCAGGCCCACCTGTGCTCCCAGGC +
Preference number: 1 (lower is better)
Translates to: GPRKPSERKQNMVLY*TKGMVRAGPPVLPG
Trigger: GCCTGGGAGCACAGGTGGGCCTGCTCGGACCATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp TGTCCTTGGAGCGGTACACGGCCCCGCCGGTTTGAGCCCTGCTGCTaGGGCTGTCAGAGGGAACCTCCGGGCATCTATCAAGCCTGTTCT +
Preference number: 1 (lower is better)
Translates to: CPWSGTRPRRFEPCC*GCQREPPGIYQACS
Trigger: AGAACAGGCTTGATAGATGCCCGGAGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTGTACCGCTCCAAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CTGTTCATGCAGAGGGGAAAGCCGTGCCTGGTGACCGGCCATCACTaGGGAGGGCCATCATCTGTGGGGGACACAGGGCACCACCTTTGG +
Preference number: 1 (lower is better)
Translates to: LFMQRGKPCLVTGHH*GGPSSVGDTGHHLW
Trigger: CCAAAGGTGGTGCCCTGTGTCCCCCACAGATGATGGCCCTCCCCAGTGATGGCCGGTCACCAGGCACGGCTTTCCCCTCTGCATGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GGAGAGCCAGAAGCTTCTGTTCTGTTCATGCAGAGGGGAAAGCCGTaGCTGGTGACCGGCCATCACTGGGGAGGGCCATCATCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: GEPEASVLFMQRGKP*LVTGHHWGGPSSVG
Trigger: CCCCACAGATGATGGCCCTCCCCAGTGATGGCCGGTCACCAGGCACGGCTTTCCCCTCTGCATGAACAGAACAGAAGCTTCTGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp GTGCCTTCCCTCTCCCTCTGTATTTTCACGAACGGCGCTGCAGCTTaGAGGCAGAGCGGCTCTAGGCGACCCGCGTGCTGGCTTTTCATG +
Preference number: 1 (lower is better)
Translates to: VPSLSLCIFTNGAAA*RQSGSRRPACWLFM
Trigger: CATGAAAAGCCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGCTGCAGCGCCGTTCGTGAAAATACAGAGGGAGAGGGAAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATaGAGGTGGGTTTACTGGACACTTCTGTTCCCAGCGGGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: GLTDSPLEAATGHVE*RWVYWTLLFPAGRE
Trigger: CTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAGGGCATaGTCCGAGCAGGCCCACCTGTGCTCCCAGGCCACACGGATTTGC +
Preference number: 1 (lower is better)
Translates to: PRRGSRTWFCTAPRA*SEQAHLCSQATRIC
Trigger: GCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTGCTCGGACCATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp CTGCGGCTGTCAGAGGGAACCTCCGGGCATCTATCAAGCCTGTTCTaGCAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTT +
Preference number: 1 (lower is better)
Translates to: LRLSEGTSGHLSSLF*QGRGNPRRGSRTWF
Trigger: AAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTGTCAGAACAGGCTTGATAGATGCCCGGAGGTTCCCTCTGACAGCCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CTGATGAGAGACCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATaGGACCCAAACAGCGGAGGCAGCCTGCCTGCAGCGTGCATGCCT +
Preference number: 1 (lower is better)
Translates to: LMRDLKISLGGFHRS*DPNSGGSLPAACMP
Trigger: AGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGGTCTCTCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTaGACACTTCTGTTCCCAGCGGGAAGAGAGACTGGGAGAAGGACA +
Preference number: 1 (lower is better)
Translates to: PLEAATGHVECRWVY*TLLFPAGRETGRRT
Trigger: TGTCCTTCTCCCAGTCTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp ACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTaGGTTTACTGGACACTTCTGTTCCCAGCGGGAAGAGAGACTGGG +
Preference number: 1 (lower is better)
Translates to: TDSPLEAATGHVECR*VYWTLLFPAGRETG
Trigger: CCCAGTCTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TCTCTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTaGAATGCAGGTGGGTTTACTGGACACTTCTGTTCCCAGCGGGAA +
Preference number: 1 (lower is better)
Translates to: SLASQTHHWRRPQDT*NAGGFTGHFCSQRE
Trigger: TTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp AAGCACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATaGTTTCAGTTGCTAGCACATCATCCAGCCACCCGAGGGGTGTTC +
Preference number: 1 (lower is better)
Translates to: KHVGRDAPEKLKSQR*FQLLAHHPATRGVF
Trigger: GAACACCCCTCGGGTGGCTGGATGATGTGCTAGCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp ACCTGCTGCCCAGAGCACACTAGGCCAGGGAGTATGGAGAGAGGGTaGGACTTGACTTCAGCTCTCAGAGAGGTGCAAGCTCCATCGAAC +
Preference number: 1 (lower is better)
Translates to: TCCPEHTRPGSMERG*DLTSALREVQAPSN
Trigger: GTTCGATGGAGCTTGCACCTCTCTGAGAGCTGAAGTCAAGTCTCACCCTCTCTCCATACTCCCTGGCCTAGTGTGCTCTGGGCAGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp GAACCATGCGAGCTTCCCTGCTGTGGTTCACACCGTGGCAAGGAATaGTGGGTAAGAACATGGCGCTCTAGTGCACAGCTGGGTGCAGTT +
Preference number: 1 (lower is better)
Translates to: EPCELPCCGSHRGKE*WVRTWRSSAQLGAV
Trigger: AACTGCACCCAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACCACAGCAGGGAAGCTCGCATGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CCATGCGAGCTTCCCTGCTGTGGTTCACACCGTGGCAAGGAATGCTaGGTAAGAACATGGCGCTCTAGTGCACAGCTGGGTGCAGTTCAT +
Preference number: 1 (lower is better)
Translates to: PCELPCCGSHRGKEC*VRTWRSSAQLGAVH
Trigger: ATGAACTGCACCCAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACCACAGCAGGGAAGCTCGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CAGGTGGGTTTACTGGACACTTCTGTTCCCAGCGGGAAGAGAGACTaGGAGAAGGACAACCCCTCACAAAACTCAGTCTCCTGCGTGGCC +
Preference number: 1 (lower is better)
Translates to: QVGLLDTSVPSGKRD*EKDNPSQNSVSCVA
Trigger: GGCCACGCAGGAGACTGAGTTTTGTGAGGGGTTGTCCTTCTCCCAGTCTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TTGCACGGTCATAGCTTCTCTTCTCTGGCCTCACAGACTCACCACTaGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGA +
Preference number: 1 (lower is better)
Translates to: LHGHSFSSLASQTHH*RRPQDTWNAGGFTG
Trigger: TCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAGAGAAGAGAAGCTATGACCGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp ATTGGACTTGCTTGGCCCCTCCAAACGGGATTCTGGAGAAGCACGTaGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTC +
Preference number: 1 (lower is better)
Translates to: IGLAWPLQTGFWRST*GATHQRSLSRRDGF
Trigger: GAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGTGCTTCTCCAGAATCCCGTTTGGAGGGGCCAAGCAAGTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp GACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTaGCCGAAGCAAGGGCCGTTTCGGGATTGGTCTTTCAGTAAAATC +
Preference number: 1 (lower is better)
Translates to: DMQTNRGGPRTSQQL*PKQGPFRDWSFSKI
Trigger: GATTTTACTGAAAGACCAATCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp CCCAACCATACACATCGTGAGGCCACATTTTCATCCAGGCCTCGGTaGCGTGTAGAACCATGCGAGCTTCCCTGCTGTGGTTCACACCGT +
Preference number: 1 (lower is better)
Translates to: PNHTHREATFSSRPR*RVEPCELPCCGSHR
Trigger: ACGGTGTGAACCACAGCAGGGAAGCTCGCATGGTTCTACACGTCACCGAGGCCTGGATGAAAATGTGGCCTCACGATGTGTATGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CAACACCATAACATGCATGTTTGCACGGTCATAGCTTCTCTTCTCTaGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGA +
Preference number: 1 (lower is better)
Translates to: QHHNMHVCTVIASLL*PHRLTTGGGHRTRG
Trigger: TCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAGAGAAGAGAAGCTATGACCGTGCAAACATGCATGTTATGGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp CTCTACAAGGTGAGCTTGCCCACTTCCTCTGCAACGCCCGGTGCCTaGAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCT +
Preference number: 1 (lower is better)
Translates to: LYKVSLPTSSATPGA*NLHIWKCKFMPLSS
Trigger: AGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AGTTCTCTACAAGGTGAGCTTGCCCACTTCCTCTGCAACGCCCGGTaGCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAG +
Preference number: 1 (lower is better)
Translates to: SSLQGELAHFLCNAR*LQPSHLEVQIHAPK
Trigger: CTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp GTGGTTCTGCAAAAACAAGTATTACTTCTGACTCTCTCATCTCTCTaGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCTGCGAGGT +
Preference number: 1 (lower is better)
Translates to: VVLQKQVLLLTLSSL*KQGSVVRRSEWLRG
Trigger: ACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAGAAGTAATACTTGTTTTTGCAGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CCCTGCTGTGGTTCACACCGTGGCAAGGAATGCTGGGTAAGAACATaGCGCTCTAGTGCACAGCTGGGTGCAGTTCATTTTCTCTATACA +
Preference number: 1 (lower is better)
Translates to: PCCGSHRGKECWVRT*RSSAQLGAVHFLYT
Trigger: TGTATAGAGAAAATGAACTGCACCCAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACCACAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp TTGCCCACTTCCTCTGCAACGCCCGGTGCCTGCAACCTTCACATCTaGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCCTCATGCA +
Preference number: 1 (lower is better)
Translates to: LPTSSATPGACNLHI*KCKFMPLSSAIPHA
Trigger: TGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp ACTTCCTCTGCAACGCCCGGTGCCTGCAACCTTCACATCTGGAAGTaGAAATTCATGCCCCTAAGTTCTGCAATTCCTCATGCAAGAGCT +
Preference number: 1 (lower is better)
Translates to: TSSATPGACNLHIWK*KFMPLSSAIPHARA
Trigger: AGCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp AAACCCCAAGTAAGTTCTCTACAAGGTGAGCTTGCCCACTTCCTCTaGAACGCCCGGTGCCTGCAACCTTCACATCTGGAAGTGCAAATT +
Preference number: 1 (lower is better)
Translates to: KPQVSSLQGELAHFL*NARCLQPSHLEVQI
Trigger: AATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACTTACTTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp GCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGCGGGCGTCTaGACTCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACAC +
Preference number: 1 (lower is better)
Translates to: AALEKETNVCRTAGV*THPAVKYGNRKGRH
Trigger: GTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR GCA 90 bp CATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCCTCATaGAAGAGCTCCTCCAAGCTTCCTGATTCCGCATCAGCCAACACC +
Preference number: 1 (lower is better)
Translates to: HLEVQIHAPKFCNSS*KSSSKLPDSASANT
Trigger: GGTGTTGGCTGATGCGGAATCAGGAAGCTTGGAGGAGCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 90 bp AGAAGTGTATACAAATTACAAACCCCAAGTAAGTTCTCTACAAGGTaGGCTTGCCCACTTCCTCTGCAACGCCCGGTGCCTGCAACCTTC +
Preference number: 1 (lower is better)
Translates to: RSVYKLQTPSKFSTR*ACPLPLQRPVPATF
Trigger: GAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACTTACTTGGGGTTTGTAATTTGTATACACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 90 bp CTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTaGAATTCCTCATGCAAGAGCTCCTCCAAGCTTCCTGATTCCGCA +
Preference number: 1 (lower is better)
Translates to: LQPSHLEVQIHAPKF*NSSCKSSSKLPDSA
Trigger: TGCGGAATCAGGAAGCTTGGAGGAGCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 90 bp CACATCATCCAGCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTaGGTAAGAAGTGTATACAAATTACAAACCCCAAGTAAGTTCTCT +
Preference number: 1 (lower is better)
Translates to: HIIQPPEGCSVSCFC*VRSVYKLQTPSKFS
Trigger: AGAGAACTTACTTGGGGTTTGTAATTTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGCTGGATGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp GTGCTGGGGTCTCCACAGCACACCGCACGGCTCTGGTGCCCTCTGTaGGAAAGCACTCGCGGCTCGCACACCCGGGCCACCAGGCCCCAA +
Preference number: 2 (lower is better)
Translates to: VLGSPQHTARLWCPL*ESTRGSHTRATRPQ
Trigger: TTGGGGCCTGGTGGCCCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTCACCAGGAGCTGACCTaGATTCTGGGGGCTCGGCCC +
Preference number: 2 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRAHQELT*ILGARP
Trigger: GGGCCGAGCCCCCAGAATCCAGGTCAGCTCCTGGTG...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp GCCTCGGCAGAGCTTGTCCTTGGAGCGGTACACGGCCCCGCCGGTTaGAGCCCTGCTGCTGCGGCTGTCAGAGGGAACCTCCGGGCATCT +
Preference number: 2 (lower is better)
Translates to: ASAELVLGAVHGPAG*SPAAAAVRGNLRAS
Trigger: AGATGCCCGGAGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGGGGCAGCCCTTGAGATaGGAGGTCCCTGTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVGQPLR*EVPVPS
Trigger: GGAAGGGACAGGGACCTCTCATCTCAAGGGCTGCCC...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTCTGGCTGCAGTCATGTaGCCCCAGGACCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRALAAVM*PQDPPS
Trigger: TGAGGGAGGGTCCTGGGGCCACATGACTGCAGCCAG...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp CAGGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTaGGACGGCTTTGACGGGCAGGTCCCCTGCCACCAGGAGCTGACC +
Preference number: 2 (lower is better)
Translates to: QAHLCSQATRICWLT*DGFDGQVPCHQELT
Trigger: GGTCAGCTCCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTGCCAGCTTTCTAGTGTaGACGGCCTGGGATGGGCCT +
Preference number: 2 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRAASFLV*TAWDGP
Trigger: AGGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGC...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGACAGGGCACCACCTTTaGGGCAGAGTGCACCCAGCT +
Preference number: 2 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVTGHHL*GRVHPA
Trigger: AGCTGGGTGCACTCTGCCCCAAAGGTGGTGCCCTGT...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGCTGTCCCTTCCTACCTaGTGCCCAGAGCACACTAGG +
Preference number: 2 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVLSLPT*CPEHTR
Trigger: CCTAGTGTGCTCTGGGCAGCAGGTAGGAAGGGACAG...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTCAGCTCTCAGAGAGGTaGAAGCTCCATCGAACCCGT +
Preference number: 2 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRAQLSER*KLHRTR
Trigger: ACGGGTTCGATGGAGCTTGCACCTCTCTGAGAGCTG...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACCGGTCCAGGTGTGGCTaGAGAGGGCGGCCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDRSRCG*RGRPVG
Trigger: CCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCG...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTTGCCTGCAGCGTGCATaGCTGCCGGTCCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGCLQRA*LPVQVW
Trigger: CCACACCTGGACCGGCAGGCATGCACGCTGCAGGCA...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCCGTGGTCCGCCGGTCTaGGTGGCTGCGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCRGPPV*VAARWL
Trigger: CAGCCACCTCGCAGCCACTCAGACCGGCGGACCACG...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCCGGAGGCAGCCTGCCTaGAGCGTGCATGCCTGCCGG +
Preference number: 2 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCRRQPA*SVHACR
Trigger: CCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCG...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACGGCCTTAGCTGGCCCTaGACAGCGGCTATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDGLSWP*TAAMAA
Trigger: GGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp ACCGCACGGCTCTGGTGCCCTCTGTTGGAAAGCACTCGCGGCTCGCACACCCGGTTCCAGGATCGACACTaGGGTGCTGGGGTCCTAACA +
Preference number: 2 (lower is better)
Translates to: TARLWCPLLESTRGSHTRFQDRH*GAGVLT
Trigger: TGTTAGGACCCCAGCACCCCAGTGTCGATCCTGGAA...CCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGACTGTGGTTCACACCGTaGCAAGGAATGCTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGLWFTP*QGMLGK
Trigger: CTTACCCAGCATTCCTTGCCACGGTGTGAACCACAG...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp CTGACAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTaGTACTGCACCAAGGGCATGGTCCGAGCAGGCCCACCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: LTGPRKPSERKQNMV*YCTKGMVRAGPPVL
Trigger: GAGCACAGGTGGGCCTGCTCGGACCATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACCCATGCGAGCTTCCCTaGTGTGGTTCACACCGTGGC +
Preference number: 2 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDPCELP*CGSHRG
Trigger: GCCACGGTGTGAACCACAGCAGGGAAGCTCGCATGG...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCACAGCGGAGGCAGCCTaGCTGCAGCGTGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCTAEAA*LQRACL
Trigger: CAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACCGGTTTGAGCCCTGCTaGTGCGGCTGTCAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDRFEPC*CGCQRE
Trigger: TTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCG...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTTATCTATATTGGACTTaGTTGGCCCCTCCAAACGGG +
Preference number: 2 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRAYLYWT*LAPPNG
Trigger: CCCGTTTGGAGGGGCCAAGCAAGTCCAATATAGATA...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGAGATGCCTCACATTGCTaGGAGAATCTCACTGACCAG +
Preference number: 2 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGDASHC*ENLTDQ
Trigger: CTGGTCAGTGAGATTCTCGCAGCAATGTGAGGCATC...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGACCGCACGGCTCTGGTaGCCTCTGTTGGAAAGCACT +
Preference number: 2 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWTARLW*PLLEST
Trigger: AGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGTTTGAGCCCTGCTGCTaGGGCTGTCAGAGGGAACCT +
Preference number: 2 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWFEPCC*GCQREP
Trigger: AGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAA...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp AAGACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGATCCCCTTTCTTTCAGTaGGACCTGGGTGTGGGATGC +
Preference number: 2 (lower is better)
Translates to: KTCRQTGEARGHPSSCGRSPFFQ*DLGVGC
Trigger: GCATCCCACACCCAGGTCTCACTGAAAGAAAGGGGA...TCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTCACAGTCGTGACCTTTaGCTTCCAGGATCGACACTG +
Preference number: 2 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGHSRDL*LPGSTL
Trigger: CAGTGTCGATCCTGGAAGTCAAAGGTCACGACTGTG...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCAGGCCCCAAGCTGCTaGCTTGGAGAGCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRQAPSC*LGEPEA
Trigger: AGCTTCTGGCTCTCCAAGGCAGCAGCTTGGGGCCTG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCTTCTGTTCTGTTCATaGAGAGGGGAAAGCCGTGCC +
Preference number: 2 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWLLFCS*RGESRA
Trigger: GGCACGGCTTTCCCCTCTGCATGAACAGAACAGAAG...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp AAGACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGACGTGGCAAGGAATGCTaGGTAAGAACATGGCGCTCT +
Preference number: 2 (lower is better)
Translates to: KTCRQTGEARGHPSSCGRRGKEC*VRTWRS
Trigger: AGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACG...TCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCGAGCTTCCCTGCTGTaGTTCACACCGTGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRRASLL*FTPWQG
Trigger: TCCTTGCCACGGTGTGAACCACAGCAGGGAAGCTCG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGACTTAAGTCGCAGAGATaGTTTCAGTTGCTAGCACAT +
Preference number: 2 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGLKSQR*FQLLAH
Trigger: ATGTGCTAGCAACTGAAACCATCTCTGCGACTTAAG...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp GGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTaGCTAGCACATCATCCAGCCACCCGAGGGGTGTTCAGTAAGCTG +
Preference number: 2 (lower is better)
Translates to: GRDAPEKLKSQRWFQ*LAHHPATRGVFSKL
Trigger: CAGCTTACTGAACACCCCTCGGGTGGCTGGATGATGTGCTAGCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTGACGGGCAACCATACACATCGTaGGGCCACATTTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: LCSQATRICWLTLDGFDGQPYTS*GHIFIQ
Trigger: CTGGATGAAAATGTGGCCTCACGATGTGTATGGTTG...CCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp AATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGCGGGCCCTTTAATACAGCGGTaGCTCCACGCCCCGCATCCG +
Preference number: 2 (lower is better)
Translates to: NRARAALEKETNVCRTAGPLIQR*LHAPHP
Trigger: CGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGG...GCCCGCGGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGCGTCTGAACTCATCCTaGTGTAAAATATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVRLNSS*CKIWKQ
Trigger: CTGTTTCCATATTTTACAGCAGGATGAGTTCAGACG...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR-3UTR GCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGTTTTATTTCTCCATATaGAGAGCTACAGGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVFYFSI*RATGFP
Trigger: AGGGAAACCTGTAGCTCTGCATATGGAGAAATAAAA...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp AACGGGATTCTGGAGAAGCACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGTCTGTAAGCACTGACTaGCATGGCCTGTTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: NGILEKHVGRDAPEKLKSSVSTD*HGLFPF
Trigger: AAAGGGGAACAGGCCATGGCAGTCAGTGCTTACAGA...CGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGTGCTTCTCCAGAATCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTGACGGGCCTTCCACACTCACTTaGCCTGTTTTAATGGACATG +
Preference number: 2 (lower is better)
Translates to: LCSQATRICWLTLDGFDGPSTLT*PVLMDM
Trigger: CATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGG...CCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCGTCCTAACAGGCCCATaGTCCCTGAGGGCCCTTTGG +
Preference number: 2 (lower is better)
Translates to: LFPLTFSNVKNDQTACESVLTGP*SLRALW
Trigger: CCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGAC...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCACCTTGGACGGCTTTaGCGGGCAGGTCCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIHLGRL*RAGPLP
Trigger: TGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTG...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAATTTCACGAACGGCGCTaGAGCTTGGAGGCAGAGCGG +
Preference number: 2 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQFHERR*SLEAER
Trigger: CCGCTCTGCCTCCAAGCTGCAGCGCCGTTCGTGAAA...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAACACACCGCACGGCTCTaGTGCCCTCTGTTGGAAAGC +
Preference number: 2 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQHTARL*CPLLES
Trigger: GCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTG...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTGAGGGCCATCATCTGTaGGGGACACAGGGCACCACC +
Preference number: 2 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIEGHHL*GTQGTT
Trigger: GGTGGTGCCCTGTGTCCCCCACAGATGATGGCCCTC...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAAACGCCCCGCATCCGATaGAGTGTTACACGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQTPRIR*SVTRVC
Trigger: ACACACACGTGTAACACTGCATCGGATGCGGGGCGT...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAACTCCCTCAGAGCCTGTaGCTGATGAGAGACCTGAAG +
Preference number: 2 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQLPQSL*LMRDLK
Trigger: CTTCAGGTCTCTCATCAGGCACAGGCTCTGAGGGAG...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp AACGGGATTCTGGAGAAGCACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGGATACAGACCATAAGTaGATGCATCTTGCATTAGCC +
Preference number: 2 (lower is better)
Translates to: NGILEKHVGRDAPEKLKSDTDHK*MHLALA
Trigger: GGCTAATGCAAGATGCATCCACTTATGGTCTGTATC...CGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGTGCTTCTCCAGAATCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTGTGACCGGCCATCACTaGGGAGGGCCATCATCTGTG +
Preference number: 2 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIVTGHH*GGPSSV
Trigger: CACAGATGATGGCCCTCCCCAGTGATGGCCGGTCAC...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp AACGGGATTCTGGAGAAGCACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGGTAAGCTGTTTCTGCTaGGTAAGAAGTGTATACAAA +
Preference number: 2 (lower is better)
Translates to: NGILEKHVGRDAPEKLKSVSCFC*VRSVYK
Trigger: TTTGTATACACTTCTTACCCAGCAGAAACAGCTTAC...CGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGTGCTTCTCCAGAATCCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GTCAGGGGATACAGCAACATCCGTAAATGCATTTCTGTGAGGAGGATGCCTCACCATGCCCCTAAGTTCTaGAATTCCTCATGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: VRGYSNIRKCISVRRMPHHAPKF*NSSCKS
Trigger: GCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATG...GTGAGGCATCCTCCTCACAGAAATGCATTTACGGATGTTGCTGTATCCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAACTATCAAGCCTGTTCTaGCAGGGCCGCGGAAACCCT +
Preference number: 2 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKLSSLF*QGRGNP
Trigger: AGGGTTTCCGCGGCCCTGTCAGAACAGGCTTGATAG...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR GCA 90 bp GTCAGGGGATACAGCAACATCCGTAAATGCATTTCTGTGAGGAGGATGCCTCACCTGTGTGACTTATCCTaGTTCAAAAATACCAAGAGT +
Preference number: 2 (lower is better)
Translates to: VRGYSNIRKCISVRRMPHLCDLS*FKNTKS
Trigger: ACTCTTGGTATTTTTGAAGCAGGATAAGTCACACAG...GTGAGGCATCCTCCTCACAGAAATGCATTTACGGATGTTGCTGTATCCCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 90 bp GATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTATCTATATaGGACTTGCTTGGCCCCTCCAAACGGGATTCTGGAGAAGCACGT +
Preference number: 2 (lower is better)
Translates to: DVRNKTDGFSINLSI*DLLGPSKRDSGEAR
Trigger: ACGTGCTTCTCCAGAATCCCGTTTGGAGGGGCCAAGCAAGTCCAATATAGATAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CCA 90 bp GGCAAATGGTTATTTTCTATTCACCTGATACAGACCATAAGTGGATGCATCTTGTCTTTCAGTGAGACCTaGGTGTGGGATGCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: GKWLFSIHLIQTISGCILSFSET*VWDARN
Trigger: GTTCCTAGCATCCCACACCCAGGTCTCACTGAAAGA...CAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTACAGCAACGTCAAAAATaGCCAGACAGCCTGCGAGTC +
Preference number: 2 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLQQRQK*PDSLRV
Trigger: GACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTG...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR TCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAATCAGCGAAAAACGTCTaGAATCGGTTTTCTTTCGTT +
Preference number: 2 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKSAKNV*NRFSFV
Trigger: AACGAAAGAAAACCGATTTCAGACGTTTTTCGCTGA...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp ACGGCTTTGACGGGCAGGTCCCCTGCCACCAGGAGCTaGCCTGGATTCTGGGGGCTCGGCCCTCGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: TALTGRSPATRS*PGFWGLGPRWL
Trigger: CAGCCAGCGAGGGCCGAGCCCCCAGAATCCAGGTCAGCTCCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GCCTGCAGCGTGCATGCCTGCCGGTCCAGGTGTGGCTaGAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAG +
Preference number: 3 (lower is better)
Translates to: ACSVHACRSRCG*RGRPVGSQGAQ
Trigger: CTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp TGGGACCCAAACAGCGGAGGCAGCCTGCCTGCAGCGTaGATGCCTGCCGGTCCAGGTGTGGCTGCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: WDPNSGGSLPAA*MPAGPGVAAEG
Trigger: GCCCTCTGCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GCTGACCTGGATTCTGGGGGCTCGGCCCTCGCTGGCTaGAGTCATGTGGCCCCAGGACCCTCCCTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: ADLDSGGSALAG*SHVAPGPSLRA
Trigger: GGCTCTGAGGGAGGGTCCTGGGGCCACATGACTGCAGCCAGCGAGGGCCGAGCCCCCAGAATCCAGGTCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTaGCTGCGAGGTGGCTGTCGTGCACGGCGGGTCTCG +
Preference number: 3 (lower is better)
Translates to: LWKQGSVVRRSE*LRGGCRARRVS
Trigger: CGAGACCCGCCGTGCACGACAGCCACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp ATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTaGGTGGCTGCGAGGTGGCTGTCGTGCACGGCGGGT +
Preference number: 3 (lower is better)
Translates to: ISLETGERGPPV*VAARWLSCTAG
Trigger: ACCCGCCGTGCACGACAGCCACCTCGCAGCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GTGCTGGGGTCTCCACAGCACACCGCACGGCTCTGGTaGCCTCTGTTGGAAAGCACTCGCGGCTCGCACACC +
Preference number: 3 (lower is better)
Translates to: VLGSPQHTARLW*PLLESTRGSHT
Trigger: GGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp TCGTTCATGGGACCCAAACAGCGGAGGCAGCCTGCCTaGAGCGTGCATGCCTGCCGGTCCAGGTGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: SFMGPKQRRQPA*SVHACRSRCGC
Trigger: GCAGCCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp GGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATaGGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAG +
Preference number: 3 (lower is better)
Translates to: GQGQLSSVDGLG*ALAGPGQRLWQ
Trigger: CTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR CCA 72 bp CAGGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTaGCTCACCTTGGACGGCTTTGACGGGCAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: QAHLCSQATRIC*LTLDGFDGQVP
Trigger: GGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp GGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCTTaGGATGAGAGGTCCCTGTCCCTTCCTACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: GPWSLRALWGSP*DERSLSLPTCC
Trigger: GCAGCAGGTAGGAAGGGACAGGGACCTCTCATCTCAAGGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp TCCATCGTTCATGGGACCCAAACAGCGGAGGCAGCCTaGCTGCAGCGTGCATGCCTGCCGGTCCAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: SIVHGTQTAEAA*LQRACLPVQVW
Trigger: CCACACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGATGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GAGCAGGCCCACCTGTGCTCCCAGGCCACACGGATTTaGTGGCTCACCTTGGACGGCTTTGACGGGCAGGTC +
Preference number: 3 (lower is better)
Translates to: EQAHLCSQATRI*WLTLDGFDGQV
Trigger: GACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCCTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp AGCGGTACACGGCCCCGCCGGTTTGAGCCCTGCTGCTaGGGCTGTCAGAGGGAACCTCCGGGCATCTATCAA +
Preference number: 3 (lower is better)
Translates to: SGTRPRRFEPCC*GCQREPPGIYQ
Trigger: TTGATAGATGCCCGGAGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTGTACCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GCAGCTTGGAGGCAGAGCGGCTCTAGGCGACCCGCGTaGTGGCTTTTCATGTCGGCCTCGGCAGAGCTTGTC +
Preference number: 3 (lower is better)
Translates to: AAWRQSGSRRPA*WLFMSASAELV
Trigger: GACAAGCTCTGCCGAGGCCGACATGAAAAGCCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp CGGCGGGTCTCGGTGTCGGCCTTCAAAGCATCACAGTaGTGGGAAATGCGACAGGGTGAGGGGGACCCAGGG +
Preference number: 3 (lower is better)
Translates to: RRVSVSAFKASQ*WEMRQGEGDPG
Trigger: CCCTGGGTCCCCCTCACCCTGTCGCATTTCCCAGCACTGTGATGCTTTGAAGGCCGACACCGAGACCCGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp TGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTaGACGGCTTTGACGGGCAGGTCCCCTGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: CAPRPHGFAGSP*TALTGRSPATR
Trigger: CCTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CTGGCTTTTCATGTCGGCCTCGGCAGAGCTTGTCCTTaGAGCGGTACACGGCCCCGCCGGTTTGAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: LAFHVGLGRACP*SGTRPRRFEPC
Trigger: GCAGGGCTCAAACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCCGAGGCCGACATGAAAAGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CAA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGAAAGGGCAGACACGCTaGTTCCCAGGACACTGCCAC +
Preference number: 3 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVKGQTR*FPGHCH
Trigger: GTGGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTT...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR-3UTR CAA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGAATTTGCTGGCTCACCTaGGACGGCTTTGACGGGCAG +
Preference number: 3 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGICWLT*DGFDGQ
Trigger: CTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAAT...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp TTAGCTCAGTGTGACATCCTGCCCGCTCCAACGGGGTaGAGTCCGAGCTGGCGCCACCGCCCATGGTCACAG +
Preference number: 3 (lower is better)
Translates to: LAQCDILPAPTG*SPSWRHRPWSQ
Trigger: CTGTGACCATGGGCGGTGGCGCCAGCTCGGACTTCACCCCGTTGGAGCGGGCAGGATGTCACACTGAGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp CGGCTCGCACACCCGGGCCACCAGGCCCCAAGCTGCTaGCTTGGAGAGCCAGAAGCTTCTGTTCTGTTCATG +
Preference number: 3 (lower is better)
Translates to: RLAHPGHQAPSC*LGEPEASVLFM
Trigger: CATGAACAGAACAGAAGCTTCTGGCTCTCCAAGGCAGCAGCTTGGGGCCTGGTGGCCCGGGTGTGCGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp GCTTGGAGGCAGAGCGGCTCTAGGCGACCCGCGTGCTaGCTTTTCATGTCGGCCTCGGCAGAGCTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: AWRQSGSRRPAC*LFMSASAELVL
Trigger: AAGGACAAGCTCTGCCGAGGCCGACATGAAAAGCCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CTCTCCCTCTGTATTTTCACGAACGGCGCTGCAGCTTaGAGGCAGAGCGGCTCTAGGCGACCCGCGTGCTGG +
Preference number: 3 (lower is better)
Translates to: LSLCIFTNGAAA*RQSGSRRPACW
Trigger: CCAGCACGCGGGTCGCCTAGAGCCGCTCTGCCTCCAAGCTGCAGCGCCGTTCGTGAAAATACAGAGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CGGGTCTCGGTGTCGGCCTTCAAAGCATCACAGTGCTaGGAAATGCGACAGGGTGAGGGGGACCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: RVSVSAFKASQC*EMRQGEGDPGP
Trigger: TGGCCCTGGGTCCCCCTCACCCTGTCGCATTTCCCAGCACTGTGATGCTTTGAAGGCCGACACCGAGACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp CCCTCCTTCAAATCCATCCTCCAGCAGGGGAAGTGGTaGTGGGGTCTCCACAGCACACCGCACGGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: PSFKSILQQGKW*WGLHSTPHGSG
Trigger: ACCAGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCACCACTTCCCCTGCTGGAGGATGGATTTGAAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CCACCCTCCTTCAAATCCATCCTCCAGCAGGGGAAGTaGTGCTGGGGTCTCCACAGCACACCGCACGGCTCT +
Preference number: 3 (lower is better)
Translates to: PPSFKSILQQGK*CWGLHSTPHGS
Trigger: AGAGCCGTGCGGTGTGCTGTGGAGACCCCAGCACCACTTCCCCTGCTGGAGGATGGATTTGAAGGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CCCACAGTCGTGACCTTTGACTTCCAGGATCGACACTaGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PTVVTFDFQDRH*GAGVLTGPWSL
Trigger: CAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGTCGATCCTGGAAGTCAAAGGTCACGACTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp GACCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATaGGACCCAAACAGCGGAGGCAGCCTGCCTGCAGCG +
Preference number: 3 (lower is better)
Translates to: DLKISLGGFHRS*DPNSGGSLPAA
Trigger: CGCTGCAGGCAGGCTGCCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp ACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTaGCCGAAGCAAGGGCCGTTTCGGGATTGGTCTTTC +
Preference number: 3 (lower is better)
Translates to: TNRGGPRTSQQL*PKQGPFRDWSF
Trigger: GAAAGACCAATCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CAA 90 bp CAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCACTCTGGTGCCCTCTGTaGGAAAGCACTCGCGGCTCG +
Preference number: 3 (lower is better)
Translates to: QGRGNPRRGSRTWFCTAPLWCPL*ESTRGS
Trigger: CGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAG...TGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp GTGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATaGGCCAGGCCTTCCACACTCACTTGGCCTGTTTTA +
Preference number: 3 (lower is better)
Translates to: VPDCPILGCGPT*ARPSTLTWPVL
Trigger: TAAAACAGGCCAAGTGAGTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR TCA 72 bp TCAGAGGGAACCTCCGGGCATCTATCAAGCCTGTTCTaGCAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: SEGTSGHLSSLF*QGRGNPRRGSR
Trigger: TCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTGTCAGAACAGGCTTGATAGATGCCCGGAGGTTCCCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GAAGCTTCTGTTCTGTTCATGCAGAGGGGAAAGCCGTaGCTGGTGACCGGCCATCACTGGGGAGGGCCATCA +
Preference number: 3 (lower is better)
Translates to: EASVLFMQRGKP*LVTGHHWGGPS
Trigger: TGATGGCCCTCCCCAGTGATGGCCGGTCACCAGGCACGGCTTTCCCCTCTGCATGAACAGAACAGAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GACTCACCACTGGAGGCGGCCACAGGACACGTGGAATaGAGGTGGGTTTACTGGACACTTCTGTTCCCAGCG +
Preference number: 3 (lower is better)
Translates to: DSPLEAATGHVE*RWVYWTLLFPA
Trigger: CGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp GGAAGCAGAACATGGTTTTGTACTGCACCAAGGGCATaGTCCGAGCAGGCCCACCTGTGCTCCCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: GSRTWFCTAPRA*SEQAHLCSQAT
Trigger: TGTGGCCTGGGAGCACAGGTGGGCCTGCTCGGACCATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp GCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTaGACACTTCTGTTCCCAGCGGGAAGAGAGACTGGG +
Preference number: 3 (lower is better)
Translates to: AATGHVECRWVY*TLLFPAGRETG
Trigger: CCCAGTCTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTaGGTTTACTGGACACTTCTGTTCCCAGCGGGAAGA +
Preference number: 3 (lower is better)
Translates to: PLEAATGHVECR*VYWTLLFPAGR
Trigger: TCTTCCCGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp CACCCCAGGGCCTTGGACTGTTTCCGGGGACTCCACTaGCCCGATGGCAACAAGAAGACATGCAGACAAACA +
Preference number: 3 (lower is better)
Translates to: HPRALDCFRGLH*PDGNKKTCRQT
Trigger: TGTTTGTCTGCATGTCTTCTTGTTGCCATCGGGGCAGTGGAGTCCCCGGAAACAGTCCAAGGCCCTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp CCAGCTTTTCCCACTCACCTTCAGCAACGTCAAAAATaGCCAGACAGCCTGCGAGTCCTGACGGTGACGCGG +
Preference number: 3 (lower is better)
Translates to: PAFPTHLQQRQK*PDSLRVLTVTR
Trigger: CCGCGTCACCGTCAGGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GAGCTTCCCTGCTGTGGTTCACACCGTGGCAAGGAATaGTGGGTAAGAACATGGCGCTCTAGTGCACAGCTG +
Preference number: 3 (lower is better)
Translates to: ELPCCGSHRGKE*WVRTWRSSAQL
Trigger: CAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACCACAGCAGGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GTGAGCTTGCCCACTTCCTCTGCAACGCCCGGTGCCTaGAACCTTCACATCTGGAAGTGCAAATTCATGCCC +
Preference number: 3 (lower is better)
Translates to: VSLPTSSATPGA*NLHIWKCKFMP
Trigger: GGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CTTCCCTGCTGTGGTTCACACCGTGGCAAGGAATGCTaGGTAAGAACATGGCGCTCTAGTGCACAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: LPCCGSHRGKEC*VRTWRSSAQLG
Trigger: ACCCAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACCACAGCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp TCACAGACTCACCACTGGAGGCGGCCACAGGACACGTaGAATGCAGGTGGGTTTACTGGACACTTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: SQTHHWRRPQDT*NAGGFTGHFCS
Trigger: GGAACAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CAA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACGCCTTCCACACTCACTaGGCCTGTTTTAATGGACAT +
Preference number: 3 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDAFHTH*ACFNGH
Trigger: ATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGGC...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp CCAGAGCACACTAGGCCAGGGAGTATGGAGAGAGGGTaGGACTTGACTTCAGCTCTCAGAGAGGTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: PEHTRPGSMERG*DLTSALREVQA
Trigger: AGCTTGCACCTCTCTGAGAGCTGAAGTCAAGTCTCACCCTCTCTCCATACTCCCTGGCCTAGTGTGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp ACACATCGTGAGGCCACATTTTCATCCAGGCCTCGGTaGCGTGTAGAACCATGCGAGCTTCCCTGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: THREATFSSRPR*RVEPCELPCCG
Trigger: ACCACAGCAGGGAAGCTCGCATGGTTCTACACGTCACCGAGGCCTGGATGAAAATGTGGCCTCACGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp CAAGGTGAGCTTGCCCACTTCCTCTGCAACGCCCGGTaGCTGCAACCTTCACATCTGGAAGTGCAAATTCAT +
Preference number: 3 (lower is better)
Translates to: QGELAHFLCNAR*LQPSHLEVQIH
Trigger: ATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GTAAGTTCTCTACAAGGTGAGCTTGCCCACTTCCTCTaGAACGCCCGGTGCCTGCAACCTTCACATCTGGAA +
Preference number: 3 (lower is better)
Translates to: VSSLQGELAHFL*NARCLQPSHLE
Trigger: TTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR-3UTR CAA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATAAAAGGGCAGACACGCTaGTTCCCAGGACACTGCCAC +
Preference number: 3 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIKGQTR*FPGHCH
Trigger: GTGGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTT...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR CCA 72 bp GGTTCACACCGTGGCAAGGAATGCTGGGTAAGAACATaGCGCTCTAGTGCACAGCTGGGTGCAGTTCATTTT +
Preference number: 3 (lower is better)
Translates to: GSHRGKECWVRT*RSSAQLGAVHF
Trigger: AAAATGAACTGCACCCAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTGTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp TTACTGGACACTTCTGTTCCCAGCGGGAAGAGAGACTaGGAGAAGGACAACCCCTCACAAAACTCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: LLDTSVPSGKRD*EKDNPSQNSVS
Trigger: GGAGACTGAGTTTTGTGAGGGGTTGTCCTTCTCCCAGTCTCTCTTCCCGCTGGGAACAGAAGTGTCCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp AATGAAATAGAAGGCGGGTCCCAACCATACACATCGTaGGGCCACATTTTCATCCAGGCCTCGGTGACGTGT +
Preference number: 3 (lower is better)
Translates to: NEIEGGSQPYTS*GHIFIQASVTC
Trigger: ACACGTCACCGAGGCCTGGATGAAAATGTGGCCTCACGATGTGTATGGTTGGGACCCGCCTTCTATTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GCAACGCCCGGTGCCTGCAACCTTCACATCTGGAAGTaGAAATTCATGCCCCTAAGTTCTGCAATTCCTCAT +
Preference number: 3 (lower is better)
Translates to: ATPGACNLHIWK*KFMPLSSAIPH
Trigger: ATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CAAAAACAAGTATTACTTCTGACTCTCTCATCTCTCTaGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGG +
Preference number: 3 (lower is better)
Translates to: QKQVLLLTLSSL*KQGSVVRRSEW
Trigger: CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAGAAGTAATACTTGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp TCCTCTGCAACGCCCGGTGCCTGCAACCTTCACATCTaGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATT +
Preference number: 3 (lower is better)
Translates to: SSATPGACNLHI*KCKFMPLSSAI
Trigger: AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp TACAAATTACAAACCCCAAGTAAGTTCTCTACAAGGTaGGCTTGCCCACTTCCTCTGCAACGCCCGGTGCCT +
Preference number: 3 (lower is better)
Translates to: YKLQTPSKFSTR*ACPLPLQRPVP
Trigger: AGGCACCGGGCGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACTTACTTGGGGTTTGTAATTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp TCAGGGGATACAGCAACATCCGTAAATGCATTTCTGTaGGGAGGATGCCTCACATTGCTGCGAGAATCTCAC +
Preference number: 3 (lower is better)
Translates to: SGDTATSVNAFL*GGCLTLLRESH
Trigger: GTGAGATTCTCGCAGCAATGTGAGGCATCCTCCTCACAGAAATGCATTTACGGATGTTGCTGTATCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp GTGCAAATTCATGCCCCTAAGTTCTGCAATTCCTCATaGAAGAGCTCCTCCAAGCTTCCTGATTCCGCATCA +
Preference number: 3 (lower is better)
Translates to: VQIHAPKFCNSS*KSSSKLPDSAS
Trigger: TGATGCGGAATCAGGAAGCTTGGAGGAGCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp TGGCTTCAGTATAAACCTATCTATATTGGACTTGCTTaGCCCCTCCAAACGGGATTCTGGAGAAGCACGTGG +
Preference number: 3 (lower is better)
Translates to: WLQYKPIYIGLA*PLQTGFWRSTW
Trigger: CCACGTGCTTCTCCAGAATCCCGTTTGGAGGGGCCAAGCAAGTCCAATATAGATAGGTTTATACTGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR TCA 72 bp GAGAAGGAAACAAATGTGTGCAGGACCGCGGGCGTCTaGACTCATCCTGCTGTAAAATATGGAAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: EKETNVCRTAGV*THPAVKYGNRK
Trigger: CTTTCTGTTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
3UTR TCA 72 bp CCACAAGTGTGGTTCTGCAAAAACAAGTATTACTTCTaGCTCTCTCATCTCTCTGGAAACAGGGGAGCGTGG +
Preference number: 3 (lower is better)
Translates to: PQVWFCKNKYYF*LSHLSGNRGAW
Trigger: CCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAGAAGTAATACTTGTTTTTGCAGAACCACACTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR GCA 72 bp TCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTaGAATTCCTCATGCAAGAGCTCCTCCAAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: SHLEVQIHAPKF*NSSCKSSSKLP
Trigger: AGGAAGCTTGGAGGAGCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp CAGCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTaGGTAAGAAGTGTATACAAATTACAAACCCCAAGT +
Preference number: 3 (lower is better)
Translates to: QPPEGCSVSCFC*VRSVYKLQTPS
Trigger: ACTTGGGGTTTGTAATTTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CCA 72 bp ATGGTTATTTTCTATTCACCTGATACAGACCATAAGTaGATGCATCTTGCATTAGCCTTTTTGGCAGGTAGG +
Preference number: 3 (lower is better)
Translates to: MVIFYSPDTDHK*MHLALAFLAGR
Trigger: CCTACCTGCCAAAAAGGCTAATGCAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGCGTGGTCCGCCGGTCTaGGTGGCTGCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVRGPPV*VAARWL
Trigger: CAGCCACCTCGCAGCCACTCAGACCGGCGGACCACG...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGCGCACCGCGAGGACCTaGGGGCGTCGGGACGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVRTART*GRRDAK
Trigger: CTTTGCGTCCCGACGCCCGCAGGTCCTCGCGGTGCG...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGCTGCTCGCGCGGCTTTaGGGTTGCCTGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVLLARL*GCLPGL
Trigger: CAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAG...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGGTCCGCCGGTCTGAGTaGCTGCGAGGTGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVVRRSE*LRGGCR
Trigger: ACGACAGCCACCTCGCAGCCACTCAGACCGGCGGAC...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGATGCCCACGGCTCCGCTaGTGCAGACCACTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGCPRLR*CRPLCG
Trigger: GCCACAGAGTGGTCTGCAGCAGCGGAGCCGTGGGCA...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGGGATCGACACTGGGGTaGTGGGGTCCTAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVGSTLG*WGPNRP
Trigger: GGGCCTGTTAGGACCCCAGCACCCCAGTGTCGATCC...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGTGCCTGCAGCGTGCATaGCTGCCGGTCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVCLQRA*LPVQVW
Trigger: CCACACCTGGACCGGCAGGCATGCACGCTGCAGGCA...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCGAGCAGGCCCACCTGTaGTCCCAGGCCACACGGATT +
Preference number: 4 (lower is better)
Translates to: GCWGPNRPMVPEGPLGQPEQAHL*SQATRI
Trigger: AATCCGTGTGGCCTGGGAGCACAGGTGGGCCTGCTC...GGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGGTGGGGATGGGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATGGGCCGCTCCCTCCCAAGCCTaGCTTCCCCAACCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MVGMGQGQLSSVDGLGWAAPSQA*LPQPVA
Trigger: GGCCACCGGTTGGGGAAGCCAGGCTTGGGAGGGAGC...GGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCCCATCCCCACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACGGGCTCGGCCCTCGCTaGCTGCAGTCATGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHGLGPR*LQSCGP
Trigger: GGGGCCACATGACTGCAGCCAGCGAGGGCCGAGCCC...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGACTGCACCAAGGGCATaGTCCGAGCAGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVTAPRA*SEQAHL
Trigger: CAGGTGGGCCTGCTCGGACCATGCCCTTGGTGCAGT...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 72 bp TCTCCACAGCACACCGCACGGCTCTGGTGCCCTCTGTaGGAAAGCACTCGCGGCTCGCACACCCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SPQHTARLWCPL*ESTRGSHTRAT
Trigger: GGTGGCCCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTGCTGTGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCGCGCGGCTTTGGGGTTaGCTGCCAGGGCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: GCWGPNRPMVPEGPLGQPARLWG*LPGLLI
Trigger: AATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGC...GGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGGCAGCGCACCGCCCATaGTGGAAACCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGAAHRP*WKPCLL
Trigger: CAGCAGGCAGGGTTTCCAGCATGGGCGGTGCGCTGC...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGAGCCTGCCTGCAGCGTaGATGCCTGCCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGSLPAA*MPAGPG
Trigger: ACCTGGACCGGCAGGCATGCACGCTGCAGGCAGGCT...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCGTGACCGGCCATCACTaGGGAGGGCCATCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GCWGPNRPMVPEGPLGQPVTGHH*GGPSSV
Trigger: CACAGATGATGGCCCTCCCCAGTGATGGCCGGTCAC...GGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCAAGGTGAGCAAGCGGCAGATGAGACCGGGAGGGGACGTGGCCCCCAGGGCTACCGCACGGCTCTGGTaGCCTCTGTTGGAAAGCACT +
Preference number: 4 (lower is better)
Translates to: AKVSKRQMRPGGDVAPRATARLW*PLLEST
Trigger: AGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT...AGCCCTGGGGGCCACGTCCCCTCCCGGTCTCATCTGCCGCTTGCTCACCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTGACGGGCGGTCCAGGTGTGGCTaGAGAGGGCGGCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LCSQATRICWLTLDGFDGRSRCG*RGRPVG
Trigger: CCCTACAGGCCGCCCTCTGCAGCCACACCTGGACCG...CCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACACAGCGGAGGCAGCCTaGCTGCAGCGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHTAEAA*LQRACL
Trigger: CAGGCATGCACGCTGCAGGCAGGCTGCCTCCGCTGT...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCCTCTGCAACGCCCGGTaGCTGCAACCTTCACATCTG +
Preference number: 4 (lower is better)
Translates to: GCWGPNRPMVPEGPLGQPLCNAR*LQPSHL
Trigger: CAGATGTGAAGGTTGCAGGCACCGGGCGTTGCAGAG...GGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCTGGCTGCAGTCATGTaGCCCCAGGACCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGLAAVM*PQDPPS
Trigger: TGAGGGAGGGTCCTGGGGCCACATGACTGCAGCCAG...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTGGCAGAGCTTGTCCTTaGAGCGGTACACGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GPPVLPGHTDLLAHLGRLGRACP*SGTRPR
Trigger: GCGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCC...AAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 72 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTaGGACGGCTTTGACGGGCAGGTCCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LCSQATRICWLT*DGFDGQVPCHQ
Trigger: CTGGTGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGTGGAAAACGGGATGGTaGAGAGCCGGCACGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGWKTGW*RAGTGN
Trigger: GTTCCCCGTGCCGGCTCTTCACCATCCCGTTTTCCA...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACGGCTGTGGCCCAACATaGGCCAGGCCTTCCACACTC +
Preference number: 4 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHGCGPT*ARPSTL
Trigger: GAGTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCC...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCAGCCCCACCGTGGCAAGGAATaGTGGGTAAGAACATGGCGC +
Preference number: 4 (lower is better)
Translates to: GCWGPNRPMVPEGPLGQPHRGKE*WVRTWR
Trigger: GCGCCATGTTCTTACCCAGCATTCCTTGCCACGGTG...GGGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGGGTCACAGCTACGGGTaGATGGACAGCCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVGHSYG*MDSQGE
Trigger: CTCACCTTGGCTGTCCATGCACCCGTAGCTGTGACC...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACCGCACGGCTCTGGTGCCCTCTGTTGGAAAGCACTCGCGGCTCGCACACCCGGTTCCGGGGACTCCACTaGCCCGATGGCAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: TARLWCPLLESTRGSHTRFRGLH*PDGNKK
Trigger: CTTCTTGTTGCCATCGGGGCAGTGGAGTCCCCGGAA...CCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGGTGGGGATGGGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATGGGCCCTGCAGACCACTCTGTaGCACGGGATGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: MVGMGQGQLSSVDGLGWALQTTL*HGMRMG
Trigger: CCCCATCCTCATCCCGTGCCACAGAGTGGTCTGCAG...GGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCCCATCCCCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGCTGCAGACCACTCTGTaGCACGGGATGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGLQTTL*HGMRMG
Trigger: CCCCATCCTCATCCCGTGCCACAGAGTGGTCTGCAG...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTGACGGGGGCCTTAGCTGGCCCTaGACAGCGGCTATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCSQATRICWLTLDGFDGGLSWP*TAAMAA
Trigger: GGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC...CCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGCGCACCGCGAGGACCTaGGGGCGTCGGGACGCAAAG +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVRTART*GRRDAK
Trigger: CTTTGCGTCCCGACGCCCGCAGGTCCTCGCGGTGCG...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp ACACTGGGGTGCTGGGGTCCTAACAGGCCCATGGTCCCTGAGGGCCCTTTGGGGAGGATTGCCTCTCATTaGTCCTCCCACTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TLGCWGPNRPMVPEGPLGRIASH*SSHCSR
Trigger: GCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCT...CCCCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGACCCCAGCACCCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTCAGAGGGGAAAGCCGTaGCTGGTGACCGGCCATCAC +
Preference number: 4 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGQRGKP*LVTGHH
Trigger: GTGATGGCCGGTCACCAGGCACGGCTTTCCCCTCTG...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAGGGCGGAGGCAGCCTGCCTaGAGCGTGCATGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AAETLGEEAEHGFVLHQGRRQPA*SVHACR
Trigger: CCGGCAGGCATGCACGCTGCAGGCAGGCTGCCTCCG...CCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGTGGACGGCCTGGGATaGGCCTTAGCTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQDTATSFNTAVPPRPASVDGLG*ALAGPG
Trigger: TCCAGGGCCAGCTAAGGCCCATCCCAGGCCGTCCAC...GGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp CGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAAGGAAACAGGGGAGCGTaGTCCGCCGGTCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RCLHAPHPMQCYTCVSLKGNRGA*SAGLSG
Trigger: GCCACTCAGACCGGCGGACCACGCTCCCCTGTTTCC...TTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCTGCAGAGGGCGGCCTGTAGGGTCTCAGGGAGCACAGGGAGCCATCGGGGTGTGCAGGTGGGTTTACTaGACACTTCTGTTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GCRGRPVGSQGAQGAIGVCRWVY*TLLFPA
Trigger: CGCTGGGAACAGAAGTGTCCAGTAAACCCACCTGCA...CACCCCGATGGCTCCCTGTGCTCCCTGAGACCCTACAGGCCGCCCTCTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGATTTCGTGCAGACCCTaGTCACAACCAGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVISCRP*SQPDSS
Trigger: GGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAAT...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGACTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGT +
Preference number: 4 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGLQTSP*PGALFR
Trigger: ACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAG...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTCCTTTAATACAGCGGTaGCTCCACGCCCCGCATCCG +
Preference number: 4 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGPLIQR*LHAPHP
Trigger: CGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGG...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCCTGAGGGTGCCAGACTaGCCCATCCTGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ACSQDTATSFNTAVPPRPLRVPD*PILGCG
Trigger: GCCACAGCCCAGGATGGGGCAGTCTGGCACCCTCAG...GGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGCTGCTGAGTGGAGAATaGCATCACAGCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVLLSGE*HHSHGH
Trigger: GTGTCCATGGCTGTGATGGCATTCTCCACTCAGCAG...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp ACCGCACGGCTCTGGTGCCCTCTGTTGGAAAGCACTCGCGGCTCGCACACCCGGCTTCTGTTCTGTTCATaGAGAGGGGAAAGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: TARLWCPLLESTRGSHTRLLFCS*RGESRA
Trigger: GGCACGGCTTTCCCCTCTGCATGAACAGAACAGAAG...CCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTCAGGCCCCAAGCTGCTaGCTTGGAGAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGQAPSC*LGEPEA
Trigger: AGCTTCTGGCTCTCCAAGGCAGCAGCTTGGGGCCTG...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCATGTCGGCCTCGGCAGAGCTTGTCCTTGGAGCGGTACACGGCCCCGCCGGTTCTCCCTCAGAGCCTGTaGCTGATGAGAGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SCRPRQSLSLERYTAPPVLPQSL*LMRDLK
Trigger: CTTCAGGTCTCTCATCAGGCACAGGCTCTGAGGGAG...AACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCCGAGGCCGACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTTTGAGCCCTGCTGCTaGGGCTGTCAGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: GPPVLPGHTDLLAHLGRLFEPCC*GCQREP
Trigger: AGGTTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAA...AAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGGCGAGGTGGCTGTCGTaGACGGCGGGTCTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRARWLS*TAGLGV
Trigger: GACACCGAGACCCGCCGTGCACGACAGCCACCTCGC...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAACCGCAGCGGGGGCTaGGACCTCCACGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: QGRGNPRRGSRTWFCTAPNRSGG*DLHGIS
Trigger: GCTGATGCCGTGGAGGTCCCAGCCCCCGCTGCGGTT...TGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTTTCTGGAGAAGCACGTaGGGCGCGACGCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGFWRST*GATHQR
Trigger: TCTCTGGTGCGTCGCGCCCCACGTGCTTCTCCAGAA...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAGGGGACCGGGAGGGGACGTaGCCCCCAGGGCTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AAETLGEEAEHGFVLHQGDREGT*PPGLFC
Trigger: ACAGAACAGCCCTGGGGGCCACGTCCCCTCCCGGTC...CCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACCTTTGGGGCAGCCCTTaGGATGAGAGGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNLWGSP*DERSLS
Trigger: GGACAGGGACCTCTCATCTCAAGGGCTGCCCCAAAG...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACCACATTAGCTCAGTGTaGCATCCTGCCCGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHHISSV*HPARSN
Trigger: GTTGGAGCGGGCAGGATGTCACACTGAGCTAATGTG...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGGCGCGGCTTTGGGGTTaGCTGCCAGGGCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: IQRCLHAPHPMQCYTCVSARLWG*LPGLLI
Trigger: AATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGC...CGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATTGCTCCTCCCACTaGTCGCGCGGCTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RCLHAPHPMQCYTCVSLKHCSSH*SRGFGV
Trigger: AACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATG...TTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGCCACGGCTCCGCTGCTaGAGACCACTCTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVPRLRC*RPLCGT
Trigger: CGTGCCACAGAGTGGTCTGCAGCAGCGGAGCCGTGG...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCCCACGGCTCCGCTGCTaGAGACCACTCTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCPRLRC*RPLCGT
Trigger: CGTGCCACAGAGTGGTCTGCAGCAGCGGAGCCGTGG...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAGTCCTCCGGAGTAGTTaGCCACGGCTCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QGRGNPRRGSRTWFCTAPVLRSS*PRLRCC
Trigger: GCAGCAGCGGAGCCGTGGGCAACTACTCCGGAGGAC...TGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACACGCCCCGCATCCGATaGAGTGTTACACGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHTPRIR*SVTRVC
Trigger: ACACACACGTGTAACACTGCATCGGATGCGGGGCGT...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCTGAGGGTGCCAGACTaGCCCATCCTGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRLRVPD*PILGCG
Trigger: GCCACAGCCCAGGATGGGGCAGTCTGGCACCCTCAG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGTCGGCCCTCGCTGGCTaGAGTCATGTGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRSALAG*SHVAPG
Trigger: TCCTGGGGCCACATGACTGCAGCCAGCGAGGGCCGA...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACTTTCACGAACGGCGCTaGAGCTTGGAGGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNFHERR*SLEAER
Trigger: CCGCTCTGCCTCCAAGCTGCAGCGCCGTTCGTGAAA...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCGCCGGTCTGAGTGGCTaGGAGGTGGCTGTCGTGCAC +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCAGLSG*EVAVVH
Trigger: GTGCACGACAGCCACCTCGCAGCCACTCAGACCGGC...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCCTTAGCTGGCCCTGGACAGCGGCTATGGCAGCCGTCTGTGGCCTGAGGGTGGATGCCTCACATTGCTaGGAGAATCTCACTGACCAG +
Preference number: 4 (lower is better)
Translates to: GLSWPWTAAMAAVCGLRVDASHC*ENLTDQ
Trigger: CTGGTCAGTGAGATTCTCGCAGCAATGTGAGGCATC...CACCCTCAGGCCACAGACGGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCGGCCTTAGCTGGCCCTaGACAGCGGCTATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRPASDAVLHVCVAQTSIGLSWP*TAAMAA
Trigger: GGCTGCCATAGCCGCTGTCCAGGGCCAGCTAAGGCC...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp CGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAAGCCAGCTTTCTAGTGTaGACGGCCTGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: RCLHAPHPMQCYTCVSLKASFLV*TAWDGP
Trigger: AGGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGC...TTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCCAGGCCCATGGTCCCTaGGGGCCCTTTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESQAHGP*GPFGAA
Trigger: GGCTGCCCCAAAGGGCCCTCAGGGACCATGGGCCTG...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACTCATCCAGGCCTCGGTaGCGTGTAGAACCATGCGAG +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNSSRPR*RVEPCE
Trigger: CTCGCATGGTTCTACACGTCACCGAGGCCTGGATGA...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACCTGTCCCTTCCTACCTaGTGCCCAGAGCACACTAGG +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNLSLPT*CPEHTR
Trigger: CCTAGTGTGCTCTGGGCAGCAGGTAGGAAGGGACAG...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACCGCACGGCTCTGGTGCCCTCTGTTGGAAAGCACTCGCGGCTCGCACACCCGGCAAAACTCAGTCTCCTaGGTGGCCAAAGGCAACTTA +
Preference number: 4 (lower is better)
Translates to: TARLWCPLLESTRGSHTRQNSVS*VAKGNL
Trigger: TAAGTTGCCTTTGGCCACGCAGGAGACTGAGTTTTG...CCGGGTGTGCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAGCCGTGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCATGTCGGCCTCGGCAGAGCTTGTCCTTGGAGCGGTACACGGCCCCGCCGGTTACAGGACACGTGGAATaGAGGTGGGTTTACTGGACA +
Preference number: 4 (lower is better)
Translates to: SCRPRQSLSLERYTAPPVTGHVE*RWVYWT
Trigger: TGTCCAGTAAACCCACCTGCATTCCACGTGTCCTGT...AACCGGCGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCCGAGGCCGACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGCAACGCCCGGTGCCTaGAACCTTCACATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SQDTATSFNTAVPPRPASATPGA*NLHIWK
Trigger: CTTCCAGATGTGAAGGTTGCAGGCACCGGGCGTTGC...GGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCTCAGTGTGACATCCTaGCCGCTCCAACGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWLSVTS*PLQRGE
Trigger: TTCACCCCGTTGGAGCGGGCAGGATGTCACACTGAG...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp AGACACGCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCAAACCGCAGCGGGGGCTaGGACCTCCACGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RHACSQDTATSFNTAVPPNRSGG*DLHGIS
Trigger: GCTGATGCCGTGGAGGTCCCAGCCCCCGCTGCGGTT...TGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGCGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGGGCTTCCCCAACCGGTaGCCTTCATGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRGFPNR*PSWARS
Trigger: GCTTCTGGCCCATGAAGGCCACCGGTTGGGGAAGCC...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCGGGATGGGCCTTAGCTaGCCCTGGACAGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCGMGLS*PWTAAM
Trigger: CATAGCCGCTGTCCAGGGCCAGCTAAGGCCCATCCC...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 72 bp CCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTaGTACTGCACCAAGGGCATGGTCCGAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRKPSERKQNMV*YCTKGMVRAGP
Trigger: TGGGCCTGCTCGGACCATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CAGGGCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCACATTGCTCCTCCCACTaGTCGCGCGGCTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QGRGNPRRGSRTWFCTAPHCSSH*SRGFGV
Trigger: AACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATG...TGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGACGCCCCGCATCCGATaGAGTGTTACACGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWTPRIR*SVTRVC
Trigger: ACACACACGTGTAACACTGCATCGGATGCGGGGCGT...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAGGGCCATGCGAGCTTCCCTaGTGTGGTTCACACCGTGGC +
Preference number: 4 (lower is better)
Translates to: AAETLGEEAEHGFVLHQGPCELP*CGSHRG
Trigger: GCCACGGTGTGAACCACAGCAGGGAAGCTCGCATGG...CCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGACCTTTGGGGCAGAGTaGACCCAGCTTTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWTFGAE*TQLFPL
Trigger: GAGTGGGAAAAGCTGGGTGCACTCTGCCCCAAAGGT...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCAGGCCACACGGATTTaGTGGCTCACCTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRQATRI*WLTLDG
Trigger: GCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCGCCAGCTTTCTAGTGTaGACGGCCTGGGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCASFLV*TAWDGP
Trigger: AGGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGC...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTCGACACTGGGGTGCTaGGGTCCTAACAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVSTLGC*GPNRPM
Trigger: CATGGGCCTGTTAGGACCCCAGCACCCCAGTGTCGA...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCTCTGGTGCCCTCTGTTaGAAAGCACTCGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PRPASDAVLHVCVAQTSISGALC*KALAAR
Trigger: GCGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGA...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGCACACCGCACGGCTCTaGTGCCCTCTGTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVHTARL*CPLLES
Trigger: GCTTTCCAACAGAGGGCACCAGAGCCGTGCGGTGTG...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCTCCAGCAGGGGAAGTaGTGCTGGGGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHLQQGK*CWGLHS
Trigger: GCTGTGGAGACCCCAGCACCACTTCCCCTGCTGGAG...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp AAGACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAGCCACACGGATTTGCTaGCTCACCTTGGACGGCTTT +
Preference number: 4 (lower is better)
Translates to: KTCRQTGEARGHPSSCGRATRIC*LTLDGF
Trigger: AAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGC...TCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATAGGCGACCCGCGTGCTaGCTTTTCATGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHRRPAC*LFMSAS
Trigger: CGAGGCCGACATGAAAAGCCAGCACGCGGGTCGCCT...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp AATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGCGGGCGGCTGTGGCCCAACATaGGCCAGGCCTTCCACACTC +
Preference number: 4 (lower is better)
Translates to: NRARAALEKETNVCRTAGGCGPT*ARPSTL
Trigger: GAGTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCC...GCCCGCGGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp TCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCACCCAGGGCCAAGGCTaGAGAACACAGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SQDTATSFNTAVPPRPASTQGQG*RTQLSC
Trigger: ACAAGAAAGCTGTGTTCTTCAGCCTTGGCCCTGGGT...GGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACTCCTCCTCTGTGCTGTaGGAAGCCCAAGTAGCACTA +
Preference number: 4 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDSSSVL*EAQVAL
Trigger: TAGTGCTACTTGGGCTTCTCACAGCACAGAGGAGGA...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTTGACGGGTCTGTAAGCACTGACTaGCATGGCCTGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LCSQATRICWLTLDGFDGSVSTD*HGLFPF
Trigger: AAAGGGGAACAGGCCATGGCAGTCAGTGCTTACAGA...CCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGGTGGGGATGGGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATGGGCCAAGGGCTGTCCAGTGTaGTGCGTTTCATTTCACAAT +
Preference number: 4 (lower is better)
Translates to: MVGMGQGQLSSVDGLGWAKGCPV*CVSFHN
Trigger: ATTGTGAAATGAAACGCACCACACTGGACAGCCCTT...GGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCCCATCCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAAGCTCCCTCCCAAGCCTaGCTTCCCCAACCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQAPSQA*LPQPVA
Trigger: GGCCACCGGTTGGGGAAGCCAGGCTTGGGAGGGAGC...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp AGACACGCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCAGGGATGGGCCTTAGCTaGCCCTGGACAGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: RHACSQDTATSFNTAVPPGMGLS*PWTAAM
Trigger: CATAGCCGCTGTCCAGGGCCAGCTAAGGCCCATCCC...TGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCCTGTGGTTCACACCGTaGCAAGGAATGCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SQDTATSFNTAVPPRPASLWFTP*QGMLGK
Trigger: CTTACCCAGCATTCCTTGCCACGGTGTGAACCACAG...GGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTAGGCTTCCATCGTTCATaGGACCCAAACAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATSFNTAVPPRPASDAVLGFHRS*DPNSGG
Trigger: GCCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCC...TAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGTTTGCTGGCTCACCTTaGACGGCTTTGACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRFAGSP*TALTGR
Trigger: CCTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAA...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp AAGACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAACTCCACTGCCCCGATaGCAACAAGAAGACATGCAG +
Preference number: 4 (lower is better)
Translates to: KTCRQTGEARGHPSSCGRTPLPR*QQEDMQ
Trigger: CTGCATGTCTTCTTGTTGCCATCGGGGCAGTGGAGT...TCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTCCCCTTTCTTTCAGTaGGACCTGGGTGTGGGATGC +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVSPFFQ*DLGVGC
Trigger: GCATCCCACACCCAGGTCTCACTGAAAGAAAGGGGA...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACACCTTGGACGGCTTTaGCGGGCAGGTCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIHLGRL*RAGPLP
Trigger: TGGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCCCAAGTCGCAAACGGTaGGCACCGCGAGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: AVKYGNRKGRHACSQDTAPSRKR*APRGPA
Trigger: CGCAGGTCCTCGCGGTGCGCACCGTTTGCGACTTGG...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCCTCCACGGCATCAGCTaGAGACGTCCCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESLHGIS*RRPLAQ
Trigger: CTGGGCAAGGGGACGTCTGCAGCTGATGCCGTGGAG...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCTGCCCACGGCTCCGCTaGTGCAGACCACTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AVKYGNRKGRHACSQDTACPRLR*CRPLCG
Trigger: GCCACAGAGTGGTCTGCAGCAGCGGAGCCGTGGGCA...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCCATGCTGGAAACCCTaGCTGCTGCCATCAGTGACA +
Preference number: 4 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRPCWKP*LLPSVT
Trigger: TGTCACTGATGGCAGCAGGCAGGGTTTCCAGCATGG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTAACATGGTTTTGTACTaGACCAAGGGCATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGNMVLY*TKGMVR
Trigger: TCGGACCATGCCCTTGGTGCAGTACAAAACCATGTT...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp AATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGCGGGCTCTAGGCGACCCGCGTaGTGGCTTTTCATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NRARAALEKETNVCRTAGSRRPA*WLFMSA
Trigger: GGCCGACATGAAAAGCCAGCACGCGGGTCGCCTAGA...GCCCGCGGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGTCTTTCAGTGAGACCTaGGTGTGGGATGCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: IQRCLHAPHPMQCYTCVSSFSET*VWDARN
Trigger: GTTCCTAGCATCCCACACCCAGGTCTCACTGAAAGA...CGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp AGACACGCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCAACAGGGCACCACCTTTaGGGCAGAGTGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RHACSQDTATSFNTAVPPTGHHL*GRVHPA
Trigger: AGCTGGGTGCACTCTGCCCCAAAGGTGGTGCCCTGT...TGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGCGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCGAGGGCCATCATCTGTaGGGGACACAGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESEGHHL*GTQGTT
Trigger: GGTGGTGCCCTGTGTCCCCCACAGATGATGGCCCTC...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAACACCAGGAGCTGACCTaGATTCTGGGGGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQHQELT*ILGARP
Trigger: GGGCCGAGCCCCCAGAATCCAGGTCAGCTCCTGGTG...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACCACGTGGAATGCAGGTaGGTTTACTGGACACTTCTG +
Preference number: 4 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDHVECR*VYWTLL
Trigger: CAGAAGTGTCCAGTAAACCCACCTGCATTCCACGTG...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACCCACCCCAGGGCCTTaGACTGTTTCCGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIPTPGP*TVSGDS
Trigger: GGAGTCCCCGGAAACAGTCCAAGGCCCTGGGGTGGG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCATTTCGTGCAGACCCTaGTCACAACCAGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCISCRP*SQPDSS
Trigger: GGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAAT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp AAGACATGCAGACAAACAGGGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGGAGCTTTATTTCGTaGAGACCCTGCTCACAACCA +
Preference number: 4 (lower is better)
Translates to: KTCRQTGEARGHPSSCGRRSFIS*RPCSQP
Trigger: TGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCT...TCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCCCTGTTTGTCTGCATGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCCTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGT +
Preference number: 4 (lower is better)
Translates to: PRPASDAVLHVCVAQTSILQTSP*PGALFR
Trigger: ACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAG...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCAGCCAGGCTGTGCACTaGATCAGGGGCTCCGGACCT +
Preference number: 4 (lower is better)
Translates to: AVKYGNRKGRHACSQDTASQAVH*IRGSGP
Trigger: AGGTCCGGAGCCCCTGATGCAGTGCACAGCCTGGCT...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCCTGCTGAGTGGAGAATaGCATCACAGCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCLLSGE*HHSHGH
Trigger: GTGTCCATGGCTGTGATGGCATTCTCCACTCAGCAG...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACTTCAAAGCATCACAGTaGTGGGAAATGCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNFKASQ*WEMRQG
Trigger: ACCCTGTCGCATTTCCCAGCACTGTGATGCTTTGAA...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp AAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGAAAGTGGACGGCCTGGGATaGGCCTTAGCTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KCVQDRGRLNSSCCKIWKVDGLG*ALAGPG
Trigger: TCCAGGGCCAGCTAAGGCCCATCCCAGGCCGTCCAC...TTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATAAACGGCGCTGCAGCTTaGAGGCAGAGCGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKINGAAA*RQSGSR
Trigger: CCTAGAGCCGCTCTGCCTCCAAGCTGCAGCGCCGTT...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGCGCCACCGCCCATaGTCACAGCTACGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIWRHRP*SQLRVH
Trigger: ATGCACCCGTAGCTGTGACCATGGGCGGTGGCGCCA...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGAGAAAGCCGTGCCTGGTaGCCGGCCATCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGESRAW*PAITGE
Trigger: CTCCCCAGTGATGGCCGGTCACCAGGCACGGCTTTC...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCAAGTTCTCTACAAGGTaGGCTTGCCCACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCKFSTR*ACPLPL
Trigger: CAGAGGAAGTGGGCAAGCTCACCTTGTAGAGAACTT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACCAAGTCGCAAACGGTaGGCACCGCGAGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGPSRKR*APRGPA
Trigger: CGCAGGTCCTCGCGGTGCGCACCGTTTGCGACTTGG...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp AAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGAAACTCCACGGCATCAGCTaGAGACGTCCCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KCVQDRGRLNSSCCKIWKLHGIS*RRPLAQ
Trigger: CTGGGCAAGGGGACGTCTGCAGCTGATGCCGTGGAG...TTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGAGTCCTCCGGAGTAGTTaGCCACGGCTCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGVLRSS*PRLRCC
Trigger: GCAGCAGCGGAGCCGTGGGCAACTACTCCGGAGGAC...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTTGCAGCGTGCATGCCTaGCGGTCCAGGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAICSVHA*RSRCGC
Trigger: GCAGCCACACCTGGACCGGCAGGCATGCACGCTGCA...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTAAAAGCATCACAGTGCTaGGAAATGCGACAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ATSFNTAVPPRPASDAVLKASQC*EMRQGE
Trigger: CTCACCCTGTCGCATTTCCCAGCACTGTGATGCTTT...TAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACGGGCCGTTTCGGGATTaGTCTTTCAGTAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNGPFRD*SFSKIF
Trigger: GAAGATTTTACTGAAAGACCAATCCCGAAACGGCCC...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 72 bp GCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTaGCTAGCACATCATCCAGCCACCCGAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: APEKLKSQRWFQ*LAHHPATRGVF
Trigger: GAACACCCCTCGGGTGGCTGGATGATGTGCTAGCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGAGGGCAGCCCTTGAGATaGGAGGTCCCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGGQPLR*EVPVPS
Trigger: GGAAGGGACAGGGACCTCTCATCTCAAGGGCTGCCC...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp AATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGCGGGCCACAGTCGTGACCTTTaGCTTCCAGGATCGACACTG +
Preference number: 4 (lower is better)
Translates to: NRARAALEKETNVCRTAGHSRDL*LPGSTL
Trigger: CAGTGTCGATCCTGGAAGTCAAAGGTCACGACTGTG...GCCCGCGGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCAGGATTGCCTCTCATTaGTCCTCCCACTGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: AVKYGNRKGRHACSQDTARIASH*SSHCSR
Trigger: GCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCT...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp AAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGAAACCTTTAATACAGCGGTaGCTCCACGCCCCGCATCCG +
Preference number: 4 (lower is better)
Translates to: KCVQDRGRLNSSCCKIWKPLIQR*LHAPHP
Trigger: CGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGG...TTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGAGGCTTCCCCAACCGGTaGCCTTCATGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGGFPNR*PSWARS
Trigger: GCTTCTGGCCCATGAAGGCCACCGGTTGGGGAAGCC...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATTCTTTCAGTGAGACCTaGGTGTGGGATGCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHSFSET*VWDARN
Trigger: GTTCCTAGCATCCCACACCCAGGTCTCACTGAAAGA...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACGAAAAACCGAGATTTTaGCTGATGCCAGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNEKPRF*LMPERD
Trigger: ATCCCTTTCTGGCATCAGCCAAAATCTCGGTTTTTC...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp CTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTGGGTTTACTGGACAACAAGTATTACTTCTaGCTCTCTCATCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTTGGGHRTRGMQVGLLDNKYYF*LSHLSG
Trigger: TCCAGAGAGATGAGAGAGTCAGAAGTAATACTTGTT...GTCCAGTAAACCCACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GGCAAATGGTTATTTTCTATTCACCTGATACAGACCATAAGTGGATGCATCTTGCCCGCTCCAACGGGGTaGAGTCCGAGCTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GKWLFSIHLIQTISGCILPAPTG*SPSWRH
Trigger: GTGGCGCCAGCTCGGACTTCACCCCGTTGGAGCGGG...CAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGCCCCTTGCTCATACATaGAGCCAATTTATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SFNTAVPPRPASDAVLHVPLAHT*SQFISH
Trigger: GTGAGAGATAAATTGGCTTCATGTATGAGCAAGGGG...CACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCAGCCAGGCTGTGCACTaGATCAGGGGCTCCGGACCT +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTSQAVH*IRGSGP
Trigger: AGGTCCGGAGCCCCTGATGCAGTGCACAGCCTGGCT...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCGTCTGAACTCATCCTaGTGTAAAATATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWRLNSS*CKIWKQ
Trigger: CTGTTTCCATATTTTACAGCAGGATGAGTTCAGACG...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCGGTTTGAGCCCTGCTaGTGCGGCTGTCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIRFEPC*CGCQRE
Trigger: TTCCCTCTGACAGCCGCAGCAGCAGGGCTCAAACCG...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGAAAGGCAACTTATTTTaGCACAAGTGTGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IQRCLHAPHPMQCYTCVSKGNLF*HKCGSA
Trigger: TGCAGAACCACACTTGTGGCAAAATAAGTTGCCTTT...CGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTGTCCTAACAGGCCCATaGTCCCTGAGGGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIVLTGP*SLRALW
Trigger: CCAAAGGGCCCTCAGGGACCATGGGCCTGTTAGGAC...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATTCCAGGATCGACACTaGGGTGCTGGGGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIFQDRH*GAGVLT
Trigger: TGTTAGGACCCCAGCACCCCAGTGTCGATCCTGGAA...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCTGCTGGGTAAGAACATaGCGCTCTAGTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESCWVRT*RSSAQL
Trigger: CAGCTGTGCACTAGAGCGCCATGTTCTTACCCAGCA...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCCGTGGCAAGGAATGCTaGGTAAGAACATGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESRGKEC*VRTWRS
Trigger: AGAGCGCCATGTTCTTACCCAGCATTCCTTGCCACG...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATATAGCTTCTCTTCTCTaGCCTCACAGACTCACCACT +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHIASLL*PHRLTT
Trigger: AGTGGTGAGTCTGTGAGGCCAGAGAAGAGAAGCTAT...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCTGGAAAACGGGATGGTaGAGAGCCGGCACGGGGAAC +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTWKTGW*RAGTGN
Trigger: GTTCCCCGTGCCGGCTCTTCACCATCCCGTTTTCCA...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATATAACACCTGTCTGGTaGACGACTCTTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHITPVW*TTLAGK
Trigger: TTTTCCAGCAAGAGTCGTTCACCAGACAGGTGTTAT...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp GCCGCGGAAACCCTCGGAGAGGAAGCAGAACATGGTTTTGTACTGCACCAAGGGGGTGTTAAGATAAAATaGAATAGAAGGCGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: AAETLGEEAEHGFVLHQGGVKIK*NRRRVP
Trigger: TGGGACCCGCCTTCTATTTCATTTTATCTTAACACC...CCCTTGGTGCAGTACAAAACCATGTTCTGCTTCCTCTCCGAGGGTTTCCGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GCCACCCGAGGGGTGTTCAGTAAGCTGTTTCTGCTGGGTAAGAAGTGTATACAAAAAACCCACACGGTCTaGGGTCTGAGGGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ATRGVFSKLFLLGKKCIQKTHTV*GLREAK
Trigger: TTTGGCTTCCCTCAGACCTCAGACCGTGTGGGTTTT...TTGTATACACTTCTTACCCAGCAGAAACAGCTTACTGAACACCCCTCGGGTGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCCTCATGCACTTGCCCACTTCCTCTaGAACGCCCGGTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHIWKCKFMPLSSAIPHALAHFL*NARCLQ
Trigger: TTGCAGGCACCGGGCGTTGCAGAGGAAGTGGGCAAG...TGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCTCAGTAAGCTGTTTCTaGTGGGTAAGAAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: ACSQDTATSFNTAVPPRPSVSCF*WVRSVY
Trigger: GTATACACTTCTTACCCAGCAGAAACAGCTTACTGA...GGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACGAGCTTCCCTGCTGTaGTTCACACCGTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGRASLL*FTPWQG
Trigger: TCCTTGCCACGGTGTGAACCACAGCAGGGAAGCTCG...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCTGCGAGAATCTCACTaGCCAGCTACTCCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAILRESH*PATPQS
Trigger: ACTCTGGGGAGTAGCTGGTCAGTGAGATTCTCGCAG...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTAACCGGTGGCCTTCATaGGCCAGAAGCCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAINRWPS*ARSHSF
Trigger: GAAGGAATGGCTTCTGGCCCATGAAGGCCACCGGTT...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCTATATTGGACTTGCTTaGCCCCTCCAAACGGGATTC +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESYIGLA*PLQTGF
Trigger: GAATCCCGTTTGGAGGGGCCAAGCAAGTCCAATATA...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCAGGACCGCGGGCGTCTaGACTCATCCTGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTRTAGV*THPAVK
Trigger: TTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCT...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACAACCATACACATCGTaGGGCCACATTTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIQPYTS*GHIFIQ
Trigger: CTGGATGAAAATGTGGCCTCACGATGTGTATGGTTG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATTCAGCGAAAAACGTCTaGAATCGGTTTTCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHSAKNV*NRFSFV
Trigger: AACGAAAGAAAACCGATTTCAGACGTTTTTCGCTGA...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATAAGGAGCTTTATTTCGTaGAGACCCTGCTCACAACCA +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIRSFIS*RPCSQP
Trigger: TGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCT...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp CTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCCTCATGCACAGCTCTCAGAGAGGTaGAAGCTCCATCGAACCCGT +
Preference number: 4 (lower is better)
Translates to: LHIWKCKFMPLSSAIPHAQLSER*KLHRTR
Trigger: ACGGGTTCGATGGAGCTTGCACCTCTCTGAGAGCTG...TGCATGAGGAATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCCTGTGTGACTTATCCTaGTTCAAAAATACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PRPASDAVLHVCVAQTSILCDLS*FKNTKS
Trigger: ACTCTTGGTATTTTTGAAGCAGGATAAGTCACACAG...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCAAGGGCTGTCCAGTGTaGTGCGTTTCATTTCACAAT +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESKGCPV*CVSFHN
Trigger: ATTGTGAAATGAAACGCACCACACTGGACAGCCCTT...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCAACCGGTGGCCTTCATaGGCCAGAAGCCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTNRWPS*ARSHSF
Trigger: GAAGGAATGGCTTCTGGCCCATGAAGGCCACCGGTT...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CCA 90 bp CTTTTCCCACTCACCTTCAGCAACGTCAAAAATGACCAGACAGCCTGCGAGTCCTGCAACCTTCACATCTaGAAGTGCAAATTCATGCCC +
Preference number: 4 (lower is better)
Translates to: LFPLTFSNVKNDQTACESCNLHI*KCKFMP
Trigger: GGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCA...GGACTCGCAGGCTGTCTGGTCATTTTTGACGTTGCTGAAGGTGAGTGGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCGTAAATGCATTTCTGTaGGGAGGATGCCTCACATTG +
Preference number: 4 (lower is better)
Translates to: AVKYGNRKGRHACSQDTAVNAFL*GGCLTL
Trigger: CAATGTGAGGCATCCTCCTCACAGAAATGCATTTAC...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp AAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGAAAGGCTGTCCAGTGTGGTaGGTTTCATTTCACAATCCT +
Preference number: 4 (lower is better)
Translates to: KCVQDRGRLNSSCCKIWKGCPVW*VSFHNP
Trigger: AGGATTGTGAAATGAAACGCACCACACTGGACAGCC...TTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GTCAGGGGATACAGCAACATCCGTAAATGCATTTCTGTGAGGAGGATGCCTCACTTCTGCAATTCCTCATaGAAGAGCTCCTCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VRGYSNIRKCISVRRMPHFCNSS*KSSSKL
Trigger: AAGCTTGGAGGAGCTCTTGCATGAGGAATTGCAGAA...GTGAGGCATCCTCCTCACAGAAATGCATTTACGGATGTTGCTGTATCCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGAGAGGATGCCTCACATTaGTGCGAGAATCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGEDASH*CENLTD
Trigger: GTCAGTGAGATTCTCGCAGCAATGTGAGGCATCCTC...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACCTTCCACACTCACTTaGCCTGTTTTAATGGACATG +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIPSTLT*PVLMDM
Trigger: CATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp AAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATATGGAAAATAACACCTGTCTGGTaGACGACTCTTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KCVQDRGRLNSSCCKIWKITPVW*TTLAGK
Trigger: TTTTCCAGCAAGAGTCGTTCACCAGACAGGTGTTAT...TTTCCATATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp CATATGCAGAGCTACAGGTTTCCCTTCCGGCTTTTGGATATAGTTAATTATACACTATCAAGCCTGTTCTaGCAGGGCCGCGGAAACCCT +
Preference number: 4 (lower is better)
Translates to: HMQSYRFPFRLLDIVNYTLSSLF*QGRGNP
Trigger: AGGGTTTCCGCGGCCCTGTCAGAACAGGCTTGATAG...TGTATAATTAACTATATCCAAAAGCCGGAAGGGAAACCTGTAGCTCTGCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCTCTGTAAGCACTGACTaGCATGGCCTGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTSVSTD*HGLFPF
Trigger: AAAGGGGAACAGGCCATGGCAGTCAGTGCTTACAGA...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCAAATGGTTATTTTCTATTCACCTGATACAGACCATAAGTGGATGCATCTTGTCCCTTCCTACCTGCTaGCCAGAGCACACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKWLFSIHLIQTISGCILSLPTC*PEHTRP
Trigger: TGGCCTAGTGTGCTCTGGGCAGCAGGTAGGAAGGGA...CAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCATTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GTCAGGGGATACAGCAACATCCGTAAATGCATTTCTGTGAGGAGGATGCCTCACCTTCACATCTGGAAGTaGAAATTCATGCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: VRGYSNIRKCISVRRMPHLHIWK*KFMPLS
Trigger: ACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAG...GTGAGGCATCCTCCTCACAGAAATGCATTTACGGATGTTGCTGTATCCCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTTATCTATATTGGACTTaGTTGGCCCCTCCAAACGGG +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIYLYWT*LAPPNG
Trigger: CCCGTTTGGAGGGGCCAAGCAAGTCCAATATAGATA...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACTTAAGTCGCAGAGATaGTTTCAGTTGCTAGCACAT +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKILKSQR*FQLLAH
Trigger: ATGTGCTAGCAACTGAAACCATCTCTGCGACTTAAG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATACGTCTGAACTCATCCTaGTGTAAAATATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIRLNSS*CKIWKQ
Trigger: CTGTTTCCATATTTTACAGCAGGATGAGTTCAGACG...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR GCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAACAGCAGGGGAAGTGGTaGTGGGGTCTCCACAGCACA +
Preference number: 4 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKQQGKW*WGLHST
Trigger: TGTGCTGTGGAGACCCCAGCACCACTTCCCCTGCTG...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGAAACAAATGTGTGCAGGACCGCGGGCGTCTGAACTCATCCTGCTGTAAAATAAAACACTTTCCCCCTTaGTCATACATGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: GNKCVQDRGRLNSSCCKIKHFPP*SYMKPI
Trigger: AATTGGCTTCATGTATGAGCAAGGGGGAAAGTGTTT...TATTTTACAGCAGGATGAGTTCAGACGCCCGCGGTCCTGCACACATTTGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CATATGCAGAGCTACAGGTTTCCCTTCCGGCTTTTGGATATAGTTAATTATACAACAGCTACGGGTGCATaGACAGCCAAGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HMQSYRFPFRLLDIVNYTTATGA*TAKVSK
Trigger: CTTGCTCACCTTGGCTGTCCATGCACCCGTAGCTGT...TGTATAATTAACTATATCCAAAAGCCGGAAGGGAAACCTGTAGCTCTGCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCCCTTCCACACTCACTTaGCCTGTTTTAATGGACATG +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTPSTLT*PVLMDM
Trigger: CATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGG...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR TCA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTATCCCCTTTCTTTCAGTaGGACCTGGGTGTGGGATGC +
Preference number: 4 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLSPFFQ*DLGVGC
Trigger: GCATCCCACACCCAGGTCTCACTGAAAGAAAGGGGA...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCGATACAGACCATAAGTaGATGCATCTTGCATTAGCC +
Preference number: 4 (lower is better)
Translates to: MKNRARAALEKETNVCRTDTDHK*MHLALA
Trigger: GGCTAATGCAAGATGCATCCACTTATGGTCTGTATC...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
3UTR CAA 72 bp AAACTCAGTCTCCTGCGTGGCCAAAGGCAACTTATTTaGCCACAAGTGTGGTTCTGCAAAAACAAGTATTAC +
Preference number: 4 (lower is better)
Translates to: KLSLLRGQRQLI*PQVWFCKNKYY
Trigger: GTAATACTTGTTTTTGCAGAACCACACTTGTGGCAAAATAAGTTGCCTTTGGCCACGCAGGAGACTGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTTTTTATTTCTCCATATaGAGAGCTACAGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIFYFSI*RATGFP
Trigger: AGGGAAACCTGTAGCTCTGCATATGGAGAAATAAAA...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAAACTCTCTCATCTCTCTaGAAACAGGGGAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKTLSSL*KQGSVV
Trigger: GACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGT...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTGTAAGCTGTTTCTGCTaGGTAAGAAGTGTATACAAA +
Preference number: 4 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIVSCFC*VRSVYK
Trigger: TTTGTATACACTTCTTACCCAGCAGAAACAGCTTAC...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR TCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAAAGTATGGAGAGAGGGTaGGACTTGACTTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKSMERG*DLTSAL
Trigger: GAGAGCTGAAGTCAAGTCTCACCCTCTCTCCATACT...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTACATGCCCCTAAGTTCTaGAATTCCTCATGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLHAPKF*NSSCKS
Trigger: GCTCTTGCATGAGGAATTGCAGAACTTAGGGGCATG...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp GGCAAATGGTTATTTTCTATTCACCTGATACAGACCATAAGTGGATGCATCTTGAGCAACATCCGTAAATaGATTTCTGTGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GKWLFSIHLIQTISGCILSNIRK*ISVRRM
Trigger: CATCCTCCTCACAGAAATGCATTTACGGATGTTGCT...CAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCATTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTAACTCAGTCTCCTGCGTaGCCAAAGGCAACTTATTTT +
Preference number: 4 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLTQSPA*PKATYF
Trigger: AAAATAAGTTGCCTTTGGCCACGCAGGAGACTGAGT...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR GCA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTACATAACATGCATGTTTaGACGGTCATAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLHNMHV*TVIASL
Trigger: AAGAGAAGCTATGACCGTGCAAACATGCATGTTATG...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp GGCAAATGGTTATTTTCTATTCACCTGATACAGACCATAAGTGGATGCATCTTGAGCAATTCAGGTGGATaGGATTTTATCCTTATCTTA +
Preference number: 4 (lower is better)
Translates to: GKWLFSIHLIQTISGCILSNSGG*DFILIL
Trigger: TAAGATAAGGATAAAATCCCATCCACCTGAATTGCT...CAAGATGCATCCACTTATGGTCTGTATCAGGTGAATAGAAAATAACCATTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CCA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAATCTCAGCAATTCAGGTaGATGGGATTTTATCCTTAT +
Preference number: 4 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKSQQFR*MGFYPY
Trigger: ATAAGGATAAAATCCCATCCACCTGAATTGCTGAGA...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp CGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACACGGCCCCGCCGGTTaGAGCCCTGCTGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: RCLHAPHPMQCYTCVSLKHGPAG*SPAAAA
Trigger: AGCCGCAGCAGCAGGGCTCAAACCGGCGGGGCCGTG...TTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp GGCCCACCTGTGCTCCCAGGCCACACGGATTTGCTGGCTCACCTTGGACGGCTTCCAGGCCACACGGATTaGCTGGCTCACCTTGGACGG +
Preference number: 5 (lower is better)
Translates to: GPPVLPGHTDLLAHLGRLPGHTD*LAHLGR
Trigger: CCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGG...AAGCCGTCCAAGGTGAGCCAGCAAATCCGTGTGGCCTGGGAGCACAGGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGCACAGGGCACCACCTTaGGGGCAGAGTGCACCCAGC +
Preference number: 5 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWHRAPP*GQSAPS
Trigger: GCTGGGTGCACTCTGCCCCAAAGGTGGTGCCCTGTG...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACTCACCTTGGACGGCTTaGACGGGCAGGTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNSPWTA*TGRSPA
Trigger: GGCAGGGGACCTGCCCGTCAAAGCCGTCCAAGGTGA...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp GGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACCGGCCTCGGCAGAGCTaGTCCTTGGAGCGGTACACG +
Preference number: 5 (lower is better)
Translates to: GASTPRIRCSVTRVCRSNRPRQS*SLERYT
Trigger: CGTGTACCGCTCCAAGGACAAGCTCTGCCGAGGCCG...GTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCACTGCTCGCGCGGCTTaGGGGTTGCCTGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCTARAA*GLPARA
Trigger: AGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS CCA 90 bp GGTATGAAGGGAACGGCCCTGGGTTCATCGGAGGTGGAGAGCTCCTaGGCAACACACAGGGAAGCTGCAAATGCAGGAGCCGTCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GMKGTALGSSEVESS*ATHREAANAGAVAA
Trigger: TGCTGCGACGGCTCCTGCATTTGCAGCTTCCCTGTGTGTTGCCCAGGAGCTCTCCACCTCCGATGAACCCAGGGCCGTTCCCTTCATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS-3UTR CAA 90 bp CTGGCCTCACAGACTCACCACTGGAGGCGGCCACAGGACACGTGGAATGCAGGTAGGATGGGGACAGGATaGCCTCTCATTGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LASQTHHWRRPQDTWNAGRMGTG*PLIAPP
Trigger: GGGAGGAGCAATGAGAGGCAATCCTGTCCCCATCCT...ACCTGCATTCCACGTGTCCTGTGGCCGCCTCCAGTGGTGAGTCTGTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGACTATATTGGACTTGCTaGGCCCCTCCAAACGGGATT +
Preference number: 5 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGLYWTC*APPNGI
Trigger: AATCCCGTTTGGAGGGGCCAAGCAAGTCCAATATAG...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp CGAGGCACGGGAGAACCAGAAGGGGCTCAGCTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGTGCAGACCCTGCTCACAACCAGACA +
Preference number: 5 (lower is better)
Translates to: RGTGEPEGAQLQTSP*PGALFRADPAHNQT
Trigger: TGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGCCCCTTCTGGTTCTCCCGTGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS GCA 90 bp CCGCCGGGCACGCTGCATGCGGATACTCAGTGGAAAGTTCTCCATTaGTGGGCACTGAGGCCATTAACGCAGTGCGTTCCCGATAGCACC +
Preference number: 5 (lower is better)
Translates to: PPGTLHADTQWKVLH*WALRPLTQCVPDST
Trigger: GGTGCTATCGGGAACGCACTGCGTTAATGGCCTCAGTGCCCAGCAATGGAGAACTTTCCACTGAGTATCCGCATGCAGCGTGCCCGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS-3UTR CAA 90 bp CTGACTCTCTCATCTCTCTGGAAACAGGGGAGCGTGGTCCGCCGGTCTGAGTGGGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCG +
Preference number: 5 (lower is better)
Translates to: LTLSSLWKQGSVVRRSEWAADVP*PRSFIS
Trigger: CGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGC...CCACTCAGACCGGCGGACCACGCTCCCCTGTTTCCAGAGAGATGAGAGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp ATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGAGGATGGGGACAGGATaGCCTCTCATTGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: IQRCLHAPHPMQCYTCVSRMGTG*PLIAPP
Trigger: GGGAGGAGCAATGAGAGGCAATCCTGTCCCCATCCT...CGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp GGGAGGCCCGAGGACATCCCAGCAGCTGTGGCCGAAGCAAGGGCCGTTTCGGGAGGAAAAACCGAGATTTaGGCTGATGCCAGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: GRPEDIPAAVAEARAVSGGKTEI*ADARKG
Trigger: TCCCTTTCTGGCATCAGCCAAAATCTCGGTTTTTCC...TCCCGAAACGGCCCTTGCTTCGGCCACAGCTGCTGGGATGTCCTCGGGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp GCTGCAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTGCAGACCCTaGTCACAACCAGACAGCTCCAGCTTCCCCAAAGGGCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: AADVPLPRSFISCRP*SQPDSSSFPKGLSS
Trigger: ACTGGACAGCCCTTTGGGGAAGCTGGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS GCA 90 bp ACGGCATCAGCTGCAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTaGAGACCCTGCTCACAACCAGACAGCTCCAGCTTCCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TASAADVPLPRSFIS*RPCSQPDSSSFPKG
Trigger: CCCTTTGGGGAAGCTGGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGATGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 90 bp CCTAATGATCACACCGAGGCACGGGAGAACCAGAAGGGGCTCAGCTaGAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTGCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: PNDHTEARENQKGLS*RRPLAQELYFVQTL
Trigger: CAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGCCCCTTCTGGTTCTCCCGTGCCTCGGTGTGATCATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS-3UTR CAA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCCAGGATTGCCTCTCATaGCTCCTCCCACTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: PRPASDAVLHVCVAQTSIQDCLS*LLPLLA
Trigger: CGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCTG...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp ATGGTGGGGATGGGGCAGGGCCAGCTTTCTAGTGTGGACGGCCTGGGATGGGCCAAGCAGAACATGGTTTaGTACTGCACCAAGGGCATG +
Preference number: 5 (lower is better)
Translates to: MVGMGQGQLSSVDGLGWAKQNMV*YCTKGM
Trigger: CATGCCCTTGGTGCAGTACAAAACCATGTTCTGCTT...GGCCCATCCCAGGCCGTCCACACTAGAAAGCTGGCCCTGCCCCATCCCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp CCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCCTACTaGACATACTCAGTTTCGGCCAGCAGGCGGGGAGCCCGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PMQCYTCVSLKHPSY*TYSVSASRRGARGS
Trigger: GCTACCTCGGGCTCCCCGCCTGCTGGCCGAAACTGAGTATGTGCAGTAGGATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 90 bp GCAGGAGCCGTCGCAGCACACTGTTTTGAGAGACGGACTCGTGGTTaGGGTTGTGGGGGTAAGGCTATGCGTTACCCTGCCATCAATGGA +
Preference number: 5 (lower is better)
Translates to: AGAVAAHCFERRTRG*GCGGKAMRYPAING
Trigger: TCCATTGATGGCAGGGTAACGCATAGCCTTACCCCCACAACCGCAACCACGAGTCCGTCTCTCAAAACAGTGTGCTGCGACGGCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS-3UTR CAA 90 bp GCCACTTCCTTTAATACAGCGGTGCCTCCACGCCCCGCATCCGATGCAGTGTTAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCG +
Preference number: 5 (lower is better)
Translates to: ATSFNTAVPPRPASDAVLAADVP*PRSFIS
Trigger: CGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGC...TAACACTGCATCGGATGCGGGGCGTGGAGGCACCGCTGTATTAAAGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCATTTGCTGGCTCACCTaGGACGGCTTTGACGGGCAG +
Preference number: 5 (lower is better)
Translates to: PRPASDAVLHVCVAQTSIICWLT*DGFDGQ
Trigger: CTGCCCGTCAAAGCCGTCCAAGGTGAGCCAGCAAAT...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS TCA 90 bp TTCAGAACAGAAAGTCACCCCCACCTGTCTTGCCCATCACGAGGCTaGGGTCGTGCCCACATCCAGCCTTTGTCCCTTTGGCACTGCCAA +
Preference number: 5 (lower is better)
Translates to: FRTESHPHLSCPSRG*GRAHIQPLSLWHCQ
Trigger: TTGGCAGTGCCAAAGGGACAAAGGCTGGATGTGGGCACGACCTCAGCCTCGTGATGGGCAAGACAGGTGGGGGTGACTTTCTGTTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS GCA 90 bp GATTGCCTCTCATTGCTCCTCCCACTGCTCGCGCGGCTTTGGGGTTaGCTGCCAGGGCTGCTAATTGCTGGTAAGAAATCACTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: DCLSLLLPLLARLWG*LPGLLIAGKKSLLR
Trigger: TCGGAGAAGTGATTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 90 bp TGTGGGAATCCCACCTGGCCACAGACAAAGGGTAGAGGAAGCAAGTaGCCCAGGAGTCTTGATCTCAGCCCAGCTCAGCATGAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: CGNPTWPQTKGRGSK*PRSLDLSPAQHEES
Trigger: GCTTTCCTCATGCTGAGCTGGGCTGAGATCAAGACTCCTGGGGCACTTGCTTCCTCTACCCTTTGTCTGTGGCCAGGTGGGATTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 90 bp ACTTACTCAGCTGCAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTaGAGACCCTGCTCACAACCAGACAGCTCCAGCTTCCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TYSAADVPLPRSFIS*RPCSQPDSSSFPKG
Trigger: CCCTTTGGGGAAGCTGGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 90 bp GGACAGGATTGCCTCTCATTGCTCCTCCCACTGCTCGCGCGGCTTTaGGGTTGCCTGCCAGGGCTGCTAATTGCTGGTAAGAAATCACTT +
Preference number: 5 (lower is better)
Translates to: GQDCLSLLLPLLARL*GCLPGLLIAGKKSL
Trigger: AAGTGATTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp AGGGTGAGACTTGACTTCAGCTCTCAGAGAGGTGCAAGCTCCATCGAACCCGTGAAAGGGCAGACACGCTaGTTCCCAGGACACTGCCAC +
Preference number: 5 (lower is better)
Translates to: RVRLDFSSQRGASSIEPVKGQTR*FPGHCH
Trigger: GTGGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTT...CACGGGTTCGATGGAGCTTGCACCTCTCTGAGAGCTGAAGTCAAGTCTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp TGCCAGACTGCCCCATCCTGGGCTGTGGCCCAACATGAGCCAGGCCTTCCACACCTTGCATTAGCCTTTTaGGCAGGTAGGAAACAAAGC +
Preference number: 5 (lower is better)
Translates to: CQTAPSWAVAQHEPGLPHLALAF*AGRKQS
Trigger: GCTTTGTTTCCTACCTGCCAAAAAGGCTAATGCAAG...GTGTGGAAGGCCTGGCTCATGTTGGGCCACAGCCCAGGATGGGGCAGTCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS TCA 90 bp ACTTCCAAACACACAAGGCCAAAGGATGGCAAGGGAGACAAAGGGTaGAGCTTTCACCTTCCGCCGGGCACGCTGCATGCGGATACTCAG +
Preference number: 5 (lower is better)
Translates to: TSKHTRPKDGKGDKG*SFHLPPGTLHADTQ
Trigger: CTGAGTATCCGCATGCAGCGTGCCCGGCGGAAGGTGAAAGCTTCACCCTTTGTCTCCCTTGCCATCCTTTGGCCTTGTGTGTTTGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CCA 90 bp TGTTCCACCACCTCTGGCTACTTCCAAACACACAAGGCCAAAGGATaGCAAGGGAGACAAAGGGTGAAGCTTTCACCTTCCGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: CSTTSGYFQTHKAKG*QGRQRVKLSPSAGH
Trigger: GTGCCCGGCGGAAGGTGAAAGCTTCACCCTTTGTCTCCCTTGCCATCCTTTGGCCTTGTGTGTTTGGAAGTAGCCAGAGGTGGTGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS-3UTR CAA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTCGGCAGAGCTTGTCCTaGGAGCGGTACACGGCCCCG +
Preference number: 5 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIRQSLS*ERYTAP
Trigger: CGGGGCCGTGTACCGCTCCAAGGACAAGCTCTGCCG...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp ACAGGATCACGTGGGCTCATACTTACTCAGCTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGTGCAGACCCTGCTCACAACCAGACA +
Preference number: 5 (lower is better)
Translates to: TGSRGLILTQLQTSP*PGALFRADPAHNQT
Trigger: TGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS GCA 90 bp AGCATGTGCGGTATACAGGATCACGTGGGCTCATACTTACTCAGCTaGAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTGCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: SMCGIQDHVGSYLLS*RRPLAQELYFVQTL
Trigger: CAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTATACCGCACATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 90 bp ATATACTCCTCGGTTGCTTCAGCATGTGCGGTATACAGGATCACGTaGGCTCATACTTACTCAGCTGCAGACGTCCCCTTGCCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: IYSSVASACAVYRIT*AHTYSAADVPLPRS
Trigger: GCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTATACCGCACATGCTGAAGCAACCGAGGAGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS-3UTR CAA 90 bp TCCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATTCTGGTGAACGACTCTaGCTGGAAAACGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: STPRIRCSVTRVCRSNIHSGERL*LENGMV
Trigger: CACCATCCCGTTTTCCAGCAAGAGTCGTTCACCAGA...ATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCACTGCTCGCGCGGCTTaGGGGTTGCCTGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: MKNRARAALEKETNVCRTTARAA*GLPARA
Trigger: AGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGT...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp CCTGAAGATCTCACTGGGAGGCTTCCATCGTTCATGGGACCCAAACAGCGGAGGCAGAGATGGTTTCAGTaGCTAGCACATCATCCAGCC +
Preference number: 5 (lower is better)
Translates to: PEDLTGRLPSFMGPKQRRQRWFQ*LAHHPA
Trigger: GGCTGGATGATGTGCTAGCAACTGAAACCATCTCTG...CCTCCGCTGTTTGGGTCCCATGAACGATGGAAGCCTCCCAGTGAGATCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp AGACACGCTTGTTCCCAGGACACTGCCACTTCCTTTAATACAGCGGTGCCTCCATCTGGTGAACGACTCTaGCTGGAAAACGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RHACSQDTATSFNTAVPPSGERL*LENGMV
Trigger: CACCATCCCGTTTTCCAGCAAGAGTCGTTCACCAGA...TGGAGGCACCGCTGTATTAAAGGAAGTGGCAGTGTCCTGGGAACAAGCGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp ATGAAAAATAGAGCAAGGGCAGCGTTAGAGAAGGAAACAAATGTGTGCAGGACCCGCGCGGCTTTGGGGTaGCCTGCCAGGGCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: MKNRARAALEKETNVCRTRAALG*PARAAN
Trigger: ATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGCG...GGTCCTGCACACATTTGTTTCCTTCTCTAACGCTGCCCTTGCTCTATTTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp GCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACACTGCCAAAGGGCAGACACGCTaGTTCCCAGGACACTGCCAC +
Preference number: 5 (lower is better)
Translates to: AVKYGNRKGRHACSQDTAKGQTR*FPGHCH
Trigger: GTGGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTT...GGCAGTGTCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp CCACGCCCCGCATCCGATGCAGTGTTACACGTGTGTGTCGCTCAAACATCCATCGCCTTCCACACTCACTaGGCCTGTTTTAATGGACAT +
Preference number: 5 (lower is better)
Translates to: PRPASDAVLHVCVAQTSIAFHTH*ACFNGH
Trigger: ATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGGC...GATGGATGTTTGAGCGACACACACGTGTAACACTGCATCGGATGCGGGGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS TCA 90 bp CACTGCAAGAAGCTTCCTTTCAAGACACTGATATTATCAAGAACGTaGAGGAAGAGTGGCAGCGGCCCACCTGAGGCACAGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HCKKLPFKTLILSRT*RKSGSGPPEAQQSW
Trigger: CCAGCTCTGCTGTGCCTCAGGTGGGCCGCTGCCACTCTTCCTTCACGTTCTTGATAATATCAGTGTCTTGAAAGGAAGCTTCTTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 90 bp CAGTGGAAAGTTCTCCATTGCTGGGCACTGAGGCCATTAACGCAGTaGGTTCCCGATAGCACCAGGTTGATCCATCCTCCTAATGATCAC +
Preference number: 5 (lower is better)
Translates to: QWKVLHCWALRPLTQ*VPDSTRLIHPPNDH
Trigger: GTGATCATTAGGAGGATGGATCAACCTGGTGCTATCGGGAACGCACTGCGTTAATGGCCTCAGTGCCCAGCAATGGAGAACTTTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS-3UTR CAA 90 bp TCATCCTGCTGTAAAATATGGAAACAGAAAGGGCAGACACGCTTGTTCCCAGGACAGGATTGCCTCTCATaGCTCCTCCCACTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: SSCCKIWKQKGQTRLFPGQDCLS*LLPLLA
Trigger: CGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCTG...TCCTGGGAACAAGCGTGTCTGCCCTTTCTGTTTCCATATTTTACAGCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS-3UTR CAA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCATAAACCTATCTATATaGGACTTGCTTGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCINLSI*DLLGPS
Trigger: GGAGGGGCCAAGCAAGTCCAATATAGATAGGTTTAT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp ACGTGGGGCGCGACGCACCAGAGAAGCTTAAGTCGCAGAGATGGTTTCAGTTGCAAAACACTTTCCCCCTaGCTCATACATGAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: TWGATHQRSLSRRDGFSCKTLSP*LIHEAN
Trigger: ATTGGCTTCATGTATGAGCAAGGGGGAAAGTGTTTT...GCAACTGAAACCATCTCTGCGACTTAAGCTTCTCTGGTGCGTCGCGCCCCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS TCA 90 bp ACGTACACCTTAATCAAACATCTTAGAGCTACTAATGAAAGGGTATaGAGGGAACGGCCCTGGGTTCATCGGAGGTGGAGAGCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TYTLIKHLRATNERV*RERPWVHRRWRAPG
Trigger: CCCAGGAGCTCTCCACCTCCGATGAACCCAGGGCCGTTCCCTTCATACCCTTTCATTAGTAGCTCTAAGATGTTTGATTAAGGTGTACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 90 bp GCTCACAACCAGACAGCTCCAGCTTCCCCAAAGGGCTGTCCAGTGTaGTGCGTTTCATTTCACAATCCTTGTCCATTTTTCCAAGTACCA +
Preference number: 5 (lower is better)
Translates to: AHNQTAPASPKGCPV*CVSFHNPCPFFQVP
Trigger: TGGTACTTGGAAAAATGGACAAGGATTGTGAAATGAAACGCACCACACTGGACAGCCCTTTGGGGAAGCTGGAGCTGTCTGGTTGTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS GCA 90 bp CACAACCAGACAGCTCCAGCTTCCCCAAAGGGCTGTCCAGTGTGGTaGGTTTCATTTCACAATCCTTGTCCATTTTTCCAAGTACCAAGT +
Preference number: 5 (lower is better)
Translates to: HNQTAPASPKGCPVW*VSFHNPCPFFQVPS
Trigger: ACTTGGTACTTGGAAAAATGGACAAGGATTGTGAAATGAAACGCACCACACTGGACAGCCCTTTGGGGAAGCTGGAGCTGTCTGGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS-3UTR CAA 90 bp CATATGCAGAGCTACAGGTTTCCCTTCCGGCTTTTGGATATAGTTAATTATACACTCTGGTGCCCTCTGTaGGAAAGCACTCGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: HMQSYRFPFRLLDIVNYTLWCPL*ESTRGS
Trigger: CGAGCCGCGAGTGCTTTCCAACAGAGGGCACCAGAG...TGTATAATTAACTATATCCAAAAGCCGGAAGGGAAACCTGTAGCTCTGCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp GAAAACATGCCGTTATCACATATACTCCTCGGTTGCTTCAGCATGTaGGGTATACAGGATCACGTGGGCTCATACTTACTCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ENMPLSHILLGCFSM*GIQDHVGSYLLSCR
Trigger: TCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTATACCGCACATGCTGAAGCAACCGAGGAGTATATGTGATAACGGCATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS-3UTR CAA 90 bp GCCTGCAACCTTCACATCTGGAAGTGCAAATTCATGCCCCTAAGTTCTGCAATTGCCTTCCACACTCACTaGGCCTGTTTTAATGGACAT +
Preference number: 5 (lower is better)
Translates to: ACNLHIWKCKFMPLSSAIAFHTH*ACFNGH
Trigger: ATGTCCATTAAAACAGGCCAAGTGAGTGTGGAAGGC...AATTGCAGAACTTAGGGGCATGAATTTGCACTTCCAGATGTGAAGGTTGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp TCTGTAGGAAACAAGTTCCAGGATAATACTGCTGTTTACAAACGATGTAAGAAACTCTACAAGGTGAGCTaGCCCACTTCCTCTGCAACG +
Preference number: 5 (lower is better)
Translates to: SVGNKFQDNTAVYKRCKKLYKVS*PTSSAT
Trigger: CGTTGCAGAGGAAGTGGGCAAGCTCACCTTGTAGAG...TTTCTTACATCGTTTGTAAACAGCAGTATTATCCTGGAACTTGTTTCCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS-3UTR CAA 90 bp CATATGCAGAGCTACAGGTTTCCCTTCCGGCTTTTGGATATAGTTAATTATACACTATCTATATTGGACTaGCTTGGCCCCTCCAAACGG +
Preference number: 5 (lower is better)
Translates to: HMQSYRFPFRLLDIVNYTLSILD*LGPSKR
Trigger: CCGTTTGGAGGGGCCAAGCAAGTCCAATATAGATAG...TGTATAATTAACTATATCCAAAAGCCGGAAGGGAAACCTGTAGCTCTGCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS GCA 90 bp TCTCTAAATTTCCAGAGACATATGCCGAAGAACCCAAATGTTCAATaGTCATCACCAACCAACTCCTCTGTAAACGTACACCTTAATCAA +
Preference number: 5 (lower is better)
Translates to: SLNFQRHMPKNPNVQ*SSPTNSSVNVHLNQ
Trigger: TTGATTAAGGTGTACGTTTACAGAGGAGTTGGTTGGTGATGAGCATTGAACATTTGGGTTCTTCGGCATATGTCTCTGGAAATTTAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS-3UTR CAA 90 bp CTGCTGTTTACAAACGATGTAAGAAACAAAACTGATGGCTTCAGTATAAACCTACAAAGGCAACTTATTTaGCCACAAGTGTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLFTNDVRNKTDGFSINLQRQLI*PQVWFC
Trigger: GCAGAACCACACTTGTGGCAAAATAAGTTGCCTTTG...TAGGTTTATACTGAAGCCATCAGTTTTGTTTCTTACATCGTTTGTAAACAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651593.1
CDS CAA 72 bp CCAGCAGGCGGGGAGCCCGAGGTAGCTCCCGCTCCCTaGAGCCAGGCCCCTGCCAGACCTGAGCTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PAGGEPEVAPAP*SQAPARPELPP
Trigger: GGGAGGGAGCTCAGGTCTGGCAGGGGCCTGGCTCAAGGGAGCGGGAGCTACCTCGGGCTCCCCGCCTGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CAA 90 bp CAGTTTCGGCCAGCAGGCGGGGAGCCCGAGGTAGCTCCCGCTCCCTaGAGCCAGGCCCCTGCCAGACCTGAGCTCCCTCCCAAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: QFRPAGGEPEVAPAP*SQAPARPELPPKPG
Trigger: GCCAGGCTTGGGAGGGAGCTCAGGTCTGGCAGGGGCCTGGCTCAAGGGAGCGGGAGCTACCTCGGGCTCCCCGCCTGCTGGCCGAAACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 72 bp AGTACCAAGTCGCAAACGGTGCGCACCGCGAGGACCTaGGGGCGTCGGGACGCAAAGCGTTCTAGGGGCGCG +
Preference number: 6 (lower is better)
Translates to: STKSQTVRTART*GRRDAKRSRGA
Trigger: CGCGCCCCTAGAACGCTTTGCGTCCCGACGCCCGCAGGTCCTCGCGGTGCGCACCGTTTGCGACTTGGTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000482653.1
CDS GCA 72 bp TGTCCTCAGAGAAGAGTCAGGGTCCCCGGCCAGGTGTaGGGCACGGAGGGACCACAGCCGGCCAGCCATGTG +
Preference number: 6 (lower is better)
Translates to: CPQRRVRVPGQV*GTEGPQPASHV
Trigger: CACATGGCTGGCCGGCTGTGGTCCCTCCGTGCCGCACACCTGGCCGGGGACCCTGACTCTTCTCTGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS CCA 72 bp CAGGGGCTCCGGACCTCCGAGAACCGCAGCGGGGGCTaGGACCTCCACGGCACTGCAAGAAGCTTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: QGLRTSENRSGG*DLHGTARSFLS
Trigger: TGAAAGGAAGCTTCTTGCAGTGCCGTGGAGGTCCCAGCCCCCGCTGCGGTTCTCGGAGGTCCGGAGCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 72 bp GATGGGGACAGGATTGCCTCTCATTGCTCCTCCCACTaGTCGCGCGGCTTTGGGGTTGCCTGCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: DGDRIASHCSSH*SRGFGVACQGC
Trigger: GCAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCTGTCCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 72 bp CCTCGGGCTGGTGGAAATAGGCATTCAGCCAGGCTGTaGACTGCATCAGGGGCTCCGGACCTCCGAGAACCG +
Preference number: 6 (lower is better)
Translates to: PRAGGNRHSARL*TASGAPDLREP
Trigger: CGGTTCTCGGAGGTCCGGAGCCCCTGATGCAGTGCACAGCCTGGCTGAATGCCTATTTCCACCAGCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306010.8
ENST00000462672.1
ENST00000651593.1
CDS GCA 72 bp GCACGGGATGAGGATGGGGACAGGATTGCCTCTCATTaGTCCTCCCACTGCTCGCGCGGCTTTGGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: ARDEDGDRIASH*SSHCSRGFGVA
Trigger: GGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGAGAGGCAATCCTGTCCCCATCCTCATCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CAA 90 bp CCGAGGCACGGGAGAACCAGAAGGGGCTCAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCGTGCAGACCCTGCTCACAACCAGAC +
Preference number: 6 (lower is better)
Translates to: PRHGRTRRGSAADVP*PRSFISCRPCSQPD
Trigger: GTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGCCCCTTCTGGTTCTCCCGTGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS GCA 72 bp CCTTGTCCATTTTTCCAAGTACCAAGTCGCAAACGGTaGGCACCGCGAGGACCTGCGGGCGTCGGGACGCAA +
Preference number: 6 (lower is better)
Translates to: PCPFFQVPSRKR*APRGPAGVGTQ
Trigger: TTGCGTCCCGACGCCCGCAGGTCCTCGCGGTGCGCACCGTTTGCGACTTGGTACTTGGAAAAATGGACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306010.8
ENST00000482653.1
ENST00000651593.1
CDS GCA 72 bp CTGGGACCTCCACGGCATCAGCTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGTGCAGACCCTGCTCAC +
Preference number: 6 (lower is better)
Translates to: LGPPRHQLQTSP*PGALFRADPAH
Trigger: GTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGATGCCGTGGAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CCA 72 bp TGCCTCTCATTGCTCCTCCCACTGCTCGCGCGGCTTTaGGGTTGCCTGCCAGGGCTGCTAATTGCTGGTAAG +
Preference number: 6 (lower is better)
Translates to: CLSLLLPLLARL*GCLPGLLIAGK
Trigger: CTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CAA 72 bp GCTGGGACCTCCACGGCATCAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCGTGCAGACCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: AGTSTASAADVP*PRSFISCRPCS
Trigger: TGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGATGCCGTGGAGGTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CAA 90 bp CCCATCACGAGGCTGAGGTCGTGCCCACATCCAGCCTTTGTCCCTTaGGCACTGCCAACAAGACCCAAACCAGCCCACCACTGTTCCACC +
Preference number: 6 (lower is better)
Translates to: PITRLRSCPHPAFVP*ALPTRPKPAHHCST
Trigger: GGTGGAACAGTGGTGGGCTGGTTTGGGTCTTGTTGGCAGTGCCAAAGGGACAAAGGCTGGATGTGGGCACGACCTCAGCCTCGTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS TCA 72 bp CACACAAGGCCAAAGGATGGCAAGGGAGACAAAGGGTaGAGCTTTCACCTTCCGCCGGGCACGCTGCATGCG +
Preference number: 6 (lower is better)
Translates to: HTRPKDGKGDKG*SFHLPPGTLHA
Trigger: CGCATGCAGCGTGCCCGGCGGAAGGTGAAAGCTTCACCCTTTGTCTCCCTTGCCATCCTTTGGCCTTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS TCA 72 bp GAAAGTCACCCCCACCTGTCTTGCCCATCACGAGGCTaGGGTCGTGCCCACATCCAGCCTTTGTCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: ESHPHLSCPSRG*GRAHIQPLSLW
Trigger: CCAAAGGGACAAAGGCTGGATGTGGGCACGACCTCAGCCTCGTGATGGGCAAGACAGGTGGGGGTGACTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS GCA 72 bp GGAGAACCAGAAGGGGCTCAGCTGCAGACGTCCCCTTaGCCAGGAGCTTTATTTCGTGCAGACCCTGCTCAC +
Preference number: 6 (lower is better)
Translates to: GEPEGAQLQTSP*PGALFRADPAH
Trigger: GTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGCCCCTTCTGGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 72 bp GGGAGAACCAGAAGGGGCTCAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCGTGCAGACCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: GRTRRGSAADVP*PRSFISCRPCS
Trigger: TGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGCCCCTTCTGGTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 72 bp AGGCTGAGGTCGTGCCCACATCCAGCCTTTGTCCCTTaGGCACTGCCAACAAGACCCAAACCAGCCCACCAC +
Preference number: 6 (lower is better)
Translates to: RLRSCPHPAFVP*ALPTRPKPAHH
Trigger: GTGGTGGGCTGGTTTGGGTCTTGTTGGCAGTGCCAAAGGGACAAAGGCTGGATGTGGGCACGACCTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 90 bp CACACAGGGAAGCTGCAAATGCAGGAGCCGTCGCAGCACACTGTTTaGAGAGACGGACTCGTGGTTGCGGTTGTGGGGGTAAGGCTATGC +
Preference number: 6 (lower is better)
Translates to: HTGKLQMQEPSQHTV*RDGLVVAVVGVRLC
Trigger: GCATAGCCTTACCCCCACAACCGCAACCACGAGTCCGTCTCTCAAAACAGTGTGCTGCGACGGCTCCTGCATTTGCAGCTTCCCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS GCA 72 bp GCTGCAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTaGAGACCCTGCTCACAACCAGACAGCTCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: AADVPLPRSFIS*RPCSQPDSSSF
Trigger: GAAGCTGGAGCTGTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS GCA 72 bp GTCGCAGCACACTGTTTTGAGAGACGGACTCGTGGTTaGGGTTGTGGGGGTAAGGCTATGCGTTACCCTGCC +
Preference number: 6 (lower is better)
Translates to: VAAHCFERRTRG*GCGGKAMRYPA
Trigger: GGCAGGGTAACGCATAGCCTTACCCCCACAACCGCAACCACGAGTCCGTCTCTCAAAACAGTGTGCTGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS GCA 72 bp AGGGTGAAGCTTTCACCTTCCGCCGGGCACGCTGCATaGGGATACTCAGTGGAAAGTTCTCCATTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RVKLSPSAGHAA*GYSVESSPLLG
Trigger: GCCCAGCAATGGAGAACTTTCCACTGAGTATCCGCATGCAGCGTGCCCGGCGGAAGGTGAAAGCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 90 bp TGGGCACTGAGGCCATTAACGCAGTGCGTTCCCGATAGCACCAGGTaGATCCATCCTCCTAATGATCACACCGAGGCACGGGAGAACCAG +
Preference number: 6 (lower is better)
Translates to: WALRPLTQCVPDSTR*IHPPNDHTEARENQ
Trigger: CTGGTTCTCCCGTGCCTCGGTGTGATCATTAGGAGGATGGATCAACCTGGTGCTATCGGGAACGCACTGCGTTAATGGCCTCAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS TCA 72 bp TGTCTGGTGAACGACTCTTGCTGGAAAACGGGATGGTaGAGAGCCGGCACGGGGAACTCTTCGATAGCCTCG +
Preference number: 6 (lower is better)
Translates to: CLVNDSCWKTGW*RAGTGNSSIAS
Trigger: CGAGGCTATCGAAGAGTTCCCCGTGCCGGCTCTTCACCATCCCGTTTTCCAGCAAGAGTCGTTCACCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS GCA 72 bp TCATTGCTCCTCCCACTGCTCGCGCGGCTTTGGGGTTaGCTGCCAGGGCTGCTAATTGCTGGTAAGAAATCA +
Preference number: 6 (lower is better)
Translates to: SLLLPLLARLWG*LPGLLIAGKKS
Trigger: TGATTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCCGCGCGAGCAGTGGGAGGAGCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306010.8
ENST00000651593.1
CDS CAA 72 bp AAGCTGCAAATGCAGGAGCCGTCGCAGCACACTGTTTaGAGAGACGGACTCGTGGTTGCGGTTGTGGGGGTA +
Preference number: 6 (lower is better)
Translates to: KLQMQEPSQHTV*RDGLVVAVVGV
Trigger: TACCCCCACAACCGCAACCACGAGTCCGTCTCTCAAAACAGTGTGCTGCGACGGCTCCTGCATTTGCAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS TCA 72 bp CATGTCCAGCTAATGACTTGCTGGAAAACGGGATGGTaGAGAGCCGGCACGGGGAACTCTTCGATAGCCTCG +
Preference number: 6 (lower is better)
Translates to: HVQLMTCWKTGW*RAGTGNSSIAS
Trigger: CGAGGCTATCGAAGAGTTCCCCGTGCCGGCTCTTCACCATCCCGTTTTCCAGCAAGTCATTAGCTGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 72 bp GTTCTCCATTGCTGGGCACTGAGGCCATTAACGCAGTaGGTTCCCGATAGCACCAGGTTGATCCATCCTCCT +
Preference number: 6 (lower is better)
Translates to: VLHCWALRPLTQ*VPDSTRLIHPP
Trigger: AGGAGGATGGATCAACCTGGTGCTATCGGGAACGCACTGCGTTAATGGCCTCAGTGCCCAGCAATGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS GCA 72 bp ACGCTGCATGCGGATACTCAGTGGAAAGTTCTCCATTaGTGGGCACTGAGGCCATTAACGCAGTGCGTTCCC +
Preference number: 6 (lower is better)
Translates to: TLHADTQWKVLH*WALRPLTQCVP
Trigger: GGGAACGCACTGCGTTAATGGCCTCAGTGCCCAGCAATGGAGAACTTTCCACTGAGTATCCGCATGCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 72 bp ACGTGGGCTCATACTTACTCAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCGTGCAGACCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: TWAHTYSAADVP*PRSFISCRPCS
Trigger: TGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CAA 72 bp AGGCCATTAACGCAGTGCGTTCCCGATAGCACCAGGTaGATCCATCCTCCTAATGATCACACCGAGGCACGG +
Preference number: 6 (lower is better)
Translates to: RPLTQCVPDSTR*IHPPNDHTEAR
Trigger: CCGTGCCTCGGTGTGATCATTAGGAGGATGGATCAACCTGGTGCTATCGGGAACGCACTGCGTTAATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 72 bp CACGCTGCATGCGGATACTCAGTGGAAAGTTCTCCATaGCTGGGCACTGAGGCCATTAACGCAGTGCGTTCC +
Preference number: 6 (lower is better)
Translates to: HAACGYSVESSP*LGTEAINAVRS
Trigger: GGAACGCACTGCGTTAATGGCCTCAGTGCCCAGCAATGGAGAACTTTCCACTGAGTATCCGCATGCAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 72 bp GGTCATTTTCAGAACAGAAAGTCACCCCCACCTGTCTaGCCCATCACGAGGCTGAGGTCGTGCCCACATCCA +
Preference number: 6 (lower is better)
Translates to: GHFQNRKSPPPV*PITRLRSCPHP
Trigger: TGGATGTGGGCACGACCTCAGCCTCGTGATGGGCAAGACAGGTGGGGGTGACTTTCTGTTCTGAAAATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CAA 90 bp TACAGGATCACGTGGGCTCATACTTACTCAGCTGCAGACGTCCCCTaGCCCAGGAGCTTTATTTCGTGCAGACCCTGCTCACAACCAGAC +
Preference number: 6 (lower is better)
Translates to: YRITWAHTYSAADVP*PRSFISCRPCSQPD
Trigger: GTCTGGTTGTGAGCAGGGTCTGCACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS GCA 72 bp GACGGACTCGTGGTTGCGGTTGTGGGGGTAAGGCTATaGGTTACCCTGCCATCAATGGAAAACATGCCGTTA +
Preference number: 6 (lower is better)
Translates to: DGLVVAVVGVRL*VTLPSMENMPL
Trigger: TAACGGCATGTTTTCCATTGATGGCAGGGTAACGCATAGCCTTACCCCCACAACCGCAACCACGAGTCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS GCA 72 bp ACAAAGGGTGAAGCTTTCACCTTCCGCCGGGCACGCTaGATGCGGATACTCAGTGGAAAGTTCTCCATTGCT +
Preference number: 6 (lower is better)
Translates to: TKGEAFTFRRAR*MRILSGKFSIA
Trigger: AGCAATGGAGAACTTTCCACTGAGTATCCGCATGCAGCGTGCCCGGCGGAAGGTGAAAGCTTCACCCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS CCA 72 bp TCGGTTGCTTCAGCATGTGCGGTATACAGGATCACGTaGGCTCATACTTACTCAGCTGCAGACGTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: SVASACAVYRIT*AHTYSAADVPL
Trigger: CAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTATACCGCACATGCTGAAGCAACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CAA 72 bp TTAAGGGAAATGGCCCCTGTTGGACACGGGCTTCCTTaGACTGTGTGGGAATCCCACCTGGCCACAGACAAA +
Preference number: 6 (lower is better)
Translates to: LREMAPVGHGLP*TVWESHLATDK
Trigger: TTTGTCTGTGGCCAGGTGGGATTCCCACACAGTCAAAGGAAGCCCGTGTCCAACAGGGGCCATTTCCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 72 bp GGTATACAGGATCACGTGGGCTCATACTTACTCAGCTaGAGACGTCCCCTTGCCCAGGAGCTTTATTTCGTG +
Preference number: 6 (lower is better)
Translates to: GIQDHVGSYLLS*RRPLAQELYFV
Trigger: CACGAAATAAAGCTCCTGGGCAAGGGGACGTCTGCAGCTGAGTAAGTATGAGCCCACGTGATCCTGTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS TCA 72 bp TACGCTCTTAGAAATGACAAGAACTTAAAGTCATGCTaGAAAGGGGCTTTCGGGCCCTTCCCCCTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: YALRNDKNLKSC*KGAFGPFPLAG
Trigger: CCCTGCCAGGGGGAAGGGCCCGAAAGCCCCTTTTCAGCATGACTTTAAGTTCTTGTCATTTCTAAGAGCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 72 bp TCCAGAACATCAAGCAGTCCTAGTATGAAACTCACCTaGCAGACTCTGGAGGAACAGGGAACGCTGATCTGG +
Preference number: 6 (lower is better)
Translates to: SRTSSSPSMKLT*QTLEEQGTLIW
Trigger: CCAGATCAGCGTTCCCTGTTCCTCCAGAGTCTGCCAGGTGAGTTTCATACTAGGACTGCTTGATGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 72 bp ACCTCTGGCTACTTCCAAACACACAAGGCCAAAGGATaGCAAGGGAGACAAAGGGTGAAGCTTTCACCTTCC +
Preference number: 6 (lower is better)
Translates to: TSGYFQTHKAKG*QGRQRVKLSPS
Trigger: GGAAGGTGAAAGCTTCACCCTTTGTCTCCCTTGCCATCCTTTGGCCTTGTGTGTTTGGAAGTAGCCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482653.1
CDS TCA 72 bp AAGCTTCCTTTCAAGACACTGATATTATCAAGAACGTaGAGGAAGAGTGGCAGCGGCCCACCTGAGGCACAG +
Preference number: 6 (lower is better)
Translates to: KLPFKTLILSRT*RKSGSGPPEAQ
Trigger: CTGTGCCTCAGGTGGGCCGCTGCCACTCTTCCTTCACGTTCTTGATAATATCAGTGTCTTGAAAGGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS CCA 72 bp CAGACAGCTCCAGCTTCCCCAAAGGGCTGTCCAGTGTaGTGCGTTTCATTTCACAATCCTTGTCCATTTTTC +
Preference number: 6 (lower is better)
Translates to: QTAPASPKGCPV*CVSFHNPCPFF
Trigger: GAAAAATGGACAAGGATTGTGAAATGAAACGCACCACACTGGACAGCCCTTTGGGGAAGCTGGAGCTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS TCA 72 bp CTCCACGGCACTGCAAGAAGCTTCCTTTCAAGACACTaGTATTATCAAGAACGTGAAGGAAGAGTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: LHGTARSFLSRH*YYQEREGRVAA
Trigger: CGCTGCCACTCTTCCTTCACGTTCTTGATAATATCAGTGTCTTGAAAGGAAGCTTCTTGCAGTGCCGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462672.1
CDS GCA 72 bp ACAGCTCCAGCTTCCCCAAAGGGCTGTCCAGTGTGGTaGGTTTCATTTCACAATCCTTGTCCATTTTTCCAA +
Preference number: 6 (lower is better)
Translates to: TAPASPKGCPVW*VSFHNPCPFFQ
Trigger: TTGGAAAAATGGACAAGGATTGTGAAATGAAACGCACCACACTGGACAGCCCTTTGGGGAAGCTGGAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS GCA 72 bp CCGTTATCACATATACTCCTCGGTTGCTTCAGCATGTaGGGTATACAGGATCACGTGGGCTCATACTTACTC +
Preference number: 6 (lower is better)
Translates to: PLSHILLGCFSM*GIQDHVGSYLL
Trigger: GAGTAAGTATGAGCCCACGTGATCCTGTATACCGCACATGCTGAAGCAACCGAGGAGTATATGTGATAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CAA 72 bp GGGCTGTCCAGTGTGGTGCGTTTCATTTCACAATCCTaGTCCATTTTTCCAAGTACCAAGTCGCAAACGGTG +
Preference number: 6 (lower is better)
Translates to: GLSSVVRFISQS*SIFPSTKSQTV
Trigger: CACCGTTTGCGACTTGGTACTTGGAAAAATGGACAAGGATTGTGAAATGAAACGCACCACACTGGACAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306010.8
ENST00000482547.1
ENST00000482653.1
ENST00000651593.1
CDS TCA 72 bp TTAATCAAACATCTTAGAGCTACTAATGAAAGGGTATaGAGGGAACGGCCCTGGGTTCATCGGAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LIKHLRATNERV*RERPWVHRRWR
Trigger: TCTCCACCTCCGATGAACCCAGGGCCGTTCCCTTCATACCCTTTCATTAGTAGCTCTAAGATGTTTGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482547.1
CDS CCA 72 bp ATGACGACAAAAGAGACGAAGGTTAACATTCTCTTTTaGAGCGGCACATGTCCAGCTAATGACTTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: MTTKETKVNILF*SGTCPANDLLE
Trigger: TTCCAGCAAGTCATTAGCTGGACATGTGCCGCTCCAAAAGAGAATGTTAACCTTCGTCTCTTTTGTCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462672.1