RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGLL (Homo sapiens)

Ensembl gene IDs: ENSG00000074416

Ensembl transcript IDs: ENST00000265052.10, ENST00000265052.9, ENST00000398101.7, ENST00000398104.5, ENST00000434178.6, ENST00000453507.6, ENST00000465597.5, ENST00000476682.1, ENST00000479967.5, ENST00000484451.1, ENST00000487473.5, ENST00000493611.1, ENST00000494830.1, ENST00000496306.5, ENST00000648300.1

Found 1221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAACCACCTCATCACACGGCCAGAGGAAGGCCACCAAGCGGAGGCTaGTCAGAGAGGGCGCTGGGGCGTGAGCGAAGGGTGGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: QPPHHTARGRPPSGG*SERALGRERRVGRK
Trigger: CTTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACCAGCCTCCGCTTGGTGGCCTTCCTCTGGCCGTGTGATGAGGTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp CAAGCGGAGGCTGGTCAGAGAGGGCGCTGGGGCGTGAGCGAAGGGTaGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: QAEAGQRGRWGVSEG*AGRRRLQLLQSGVL
Trigger: CAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACCAGCCTCCGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp GCCGTGCGTGAGATGTCAGGCACGCTCACACGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGC +
Preference number: 1 (lower is better)
Translates to: AVREMSGTLTRRVLC*LLTQQGDMVGGCTS
Trigger: GCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp AGCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTaGAGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCT +
Preference number: 1 (lower is better)
Translates to: STHQCSLGEPSTTWK*REAGSLLEGREADS
Trigger: AGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp TTTCAGAGCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTaGAAGTGGAGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: FQSTHQCSLGEPSTT*KWREAGSLLEGREA
Trigger: AGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp GTGAGATGTCAGGCACGCTCACACGCAGGGTCCTGTGTTGGCTCCTaGCCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTG +
Preference number: 1 (lower is better)
Translates to: VRCQARSHAGSCVGS*PSRGTWWADVPALL
Trigger: CAGAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp GTGGGATCCTGTGGGTTTTCAGAGCACCCACCAGTGCTCCCTCGGTaGGCCCAGCACCACCTGGAAGTGGAGGGAAGCTGGGTCGCTGCT +
Preference number: 1 (lower is better)
Translates to: VGSCGFSEHPPVLPR*AQHHLEVEGSWVAA
Trigger: AGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTGAAAACCCACAGGATCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 90 bp GGCTTCACAGCTTTCCAAGGACAGGGACCGGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGCTCACACGCAGGGTCCTGTGTTGGC +
Preference number: 1 (lower is better)
Translates to: GFTAFQGQGPALEWP*VRCQARSHAGSCVG
Trigger: GCCAACACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGAAAGCTGTGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp GTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTGGGTCGCTGCTaGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGA +
Preference number: 1 (lower is better)
Translates to: VSPAPPGSGGKLGRC*KGGRLTLYPSPLQG
Trigger: TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp TCACAGCTTTCCAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTaGGATGTCAGGCACGCTCACACGCAGGGTCCTGTGTTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: SQLSKDRDRLWSGRA*DVRHAHTQGPVLAP
Trigger: AGGAGCCAACACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGAAAGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp AGCAGGGTGACCCGTTCCTGGCTCTCATGGTGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCACACTCTCCAGGAACCAAGGTTAGC +
Preference number: 1 (lower is better)
Translates to: SRVTRSWLSWCDQGC*REGGGAHSPGTKVS
Trigger: GCTAACCTTGGTTCCTGGAGAGTGTGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAGGAACGGGTCACCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp GGGCACAGAGTGATCTTCAGCAGGGTGACCCGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGGAGGGAGGGTGGAGGGGCACACTCT +
Preference number: 1 (lower is better)
Translates to: GHRVIFSRVTRSWLS*CDQGCWREGGGAHS
Trigger: AGAGTGTGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAGGAACGGGTCACCCTGCTGAAGATCACTCTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp ACGCAAGGCTTCACAGCTTTCCAAGGACAGGGACCGGCTCTGGAGTaGCCGTGCGTGAGATGTCAGGCACGCTCACACGCAGGGTCCTGT +
Preference number: 1 (lower is better)
Translates to: TQGFTAFQGQGPALE*PCVRCQARSHAGSC
Trigger: ACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGAAAGCTGTGAAGCCTTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTaGCATTCCTTCCAAACCTCAGTTCCTCCACGCCCCTGCGCTGGT +
Preference number: 1 (lower is better)
Translates to: PLPSSHLLEAKLCET*HSFQTSVPPRPCAG
Trigger: ACCAGCGCAGGGGCGTGGAGGAACTGAGGTTTGGAAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp CAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTaGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTC +
Preference number: 1 (lower is better)
Translates to: QGPPDFSATLMGISR*TPAVAHVSLSAWRF
Trigger: GAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR TCA 90 bp GAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTaGTGCCACCACATGCATCTGGGGGAGGCAGCAGGGAGGCGTAGG +
Preference number: 1 (lower is better)
Translates to: ESLVRPHADIQFGEW*CHHMHLGEAAGRRR
Trigger: CCTACGCCTCCCTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 90 bp GGCCGCATGCTGATATTCAATTTGGGGAATGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGC +
Preference number: 1 (lower is better)
Translates to: GRMLIFNLGNGDATT*IWGRQQGGVGTLCG
Trigger: GCCACACAAAGTCCCTACGCCTCCCTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACCATTCCCCAAATTGAATATCAGCATGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 90 bp CTGCCATCTCCATCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTaGGACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCA +
Preference number: 1 (lower is better)
Translates to: LPSPSEFLAGTSRLQ*DANGHLQVDSSRCS
Trigger: TGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGATGGAGATGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR CCA 90 bp CCTTCTGCCTCTAGACTGCCGACCTGCCATCTCCATCCGAATTTCTaGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCC +
Preference number: 1 (lower is better)
Translates to: PSASRLPTCHLHPNF*QGPPDFSATLMGIS
Trigger: GGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGATGGAGATGGCAGGTCGGCAGTCTAGAGGCAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR CCA 90 bp CGGGCACCGGCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCCACATGTTTATTTCATGGAAGACGG +
Preference number: 1 (lower is better)
Translates to: RAPANAFRVGTQFLP*LSFERPTCLFHGRR
Trigger: CCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR TCA 90 bp AGCTTTTCAGGCATGAAACCCATTTCTGTATGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTTGTGTGCCAGGCCTCTCTGGGTCCC +
Preference number: 1 (lower is better)
Translates to: SFSGMKPISVWTGLC*RWCLGLVCQASLGP
Trigger: GGGACCCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAATGGGTTTCATGCCTGAAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp CAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAGCCCAGGGCATCTCTGGGCTTTTGG +
Preference number: 1 (lower is better)
Translates to: QGGVGTLCGLLYHSS*ENYRSEPRASLGFW
Trigger: CCAAAAGCCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp ACTGCCGGCCCAACCTGTCCAGTTCTGTACAGTAGCATCAAGCTCTaGTTCCCTCAAACTCCCCTTGCTCCCTCCCACCTATCCACCAAA +
Preference number: 1 (lower is better)
Translates to: TAGPTCPVLYSSIKL*FPQTPLAPSHLSTK
Trigger: TTTGGTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGAATCAGAGCTTGATGCTACTGTACAGAACTGGACAGGTTGGGCCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp CAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACT +
Preference number: 1 (lower is better)
Translates to: QCIQGGDAVPAVAVL*ETHMFISWKTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR TCA 90 bp TTTGTGTGGCCTGCTCTATCACAGCTCCTGGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGGCTTTTGGAAAGGGTTCCTGCTTTT +
Preference number: 1 (lower is better)
Translates to: FVWPALSQLLGELQI*AQGISGLLERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAGCAGGCCACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 90 bp TTCTGTAAAAAGCTTTTCAGGCATGAAACCCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTGCTTGGGCCTTGTGTGCCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: FCKKLFRHETHFCMD*AVLTVVLGPCVPGL
Trigger: GAGGCCTGGCACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAATGGGTTTCATGCCTGAAAAGCTTTTTACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 90 bp TCCTTTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGTGGAGAACATGGTAGGCACCTTCAT +
Preference number: 1 (lower is better)
Translates to: SFERPTCLFHGRRSW*LQEAPCGEHGRHLH
Trigger: ATGAAGGTGCCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGAGGGCGCTGGGGCGTaGGCGAAGGGTGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFEGAGA*AKGGQE
Trigger: TTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFCPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTCAGAGAGGGCGCTaGGGCGTGAGCGAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGQRGR*GVSEGW
Trigger: CCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFEHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTEHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAAGCCTTGGCCTTGGGTaGGGCCTGTCCCGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSSLGLG*GLSRPV
Trigger: GACAGGCCGGGACAGGCCTCACCCAAGGCCAAGGCT...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAGCCTTGGCCTTGGGTaGGGCCTGTCCCGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTSLGLG*GLSRPV
Trigger: GACAGGCCGGGACAGGCCTCACCCAAGGCCAAGGCT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGTCAGAGAGGGCGCTaGGGCGTGAGCGAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTGQRGR*GVSEGW
Trigger: CCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCCACCAAGCGGAGGCTaGTCAGAGAGGGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTPPSGG*SERALG
Trigger: CCCCAGCGCCCTCTCTGACCAGCCTCCGCTTGGTGG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGCCAGCCTTGGCCTTaGGTGAGGCCTGTCCCGGCC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTCQPWP*VRPVPA
Trigger: GGCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGCCAGCCTTGGCCTTaGGTGAGGCCTGTCCCGGCC +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFCQPWP*VRPVPA
Trigger: GGCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGCAGTTCCCGCTGCTaGAGGAAGAAGGGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGSSRC*RKKGGS
Trigger: GCTCCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKRRVLC*LLTQQG
Trigger: CCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGAGGGCGCTGGGGCGTaGGCGAAGGGTGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAEGAGA*AKGGQE
Trigger: TTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAACTCGGGGACCAACCTaGGCCTCCCCCTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGTRGPT*ASPWQE
Trigger: CTCCTGCCAGGGGGAGGCTCAGGTTGGTCCCCGAGT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGCCTTGGCCTTGGGTaGGGCCTGTCCCGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSLGLG*GLSRPV
Trigger: GACAGGCCGGGACAGGCCTCACCCAAGGCCAAGGCT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGAAGGGAGGGAGGCTaGCTCTCTACCCCTCACCTC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGREGG*LSTPHL
Trigger: GAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCAGGAAGGCCTGGCCTaGTGCTGTGCTGGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFQEGLA*CCAGPL
Trigger: GAGAGGCCCAGCACAGCAGCAGGCCAGGCCTTCCTG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAACCAAGCCCCCACCTaGCCCTTGTGGGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTNQAPT*PLWGEG
Trigger: GCCCTCACCCCACAAGGGGCAGGTGGGGGCTTGGTT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGTTCCTCCACGCCCCTaGGCTGGTGTGACTCCAGAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKVPPRP*AGVTPE
Trigger: CTCTGGAGTCACACCAGCGCAGGGGCGTGGAGGAAC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGTCCTGGTGGGAAGTaGCCTCTCCTCTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGPGGK*PLLCGP
Trigger: GGGGCCACAGAGGAGAGGCCACTTCCCACCAGGACC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTRRVLC*LLTQQG
Trigger: CCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCACTCGGGGACCAACCTaGGCCTCCCCCTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKATRGPT*ASPWQE
Trigger: CTCCTGCCAGGGGGAGGCTCAGGTTGGTCCCCGAGT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCCCTCCCTGGCCTTTaGCTTCCTCTCACCTTCTCG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPLPGL*LPLTFS
Trigger: CGAGAAGGTGAGAGGAAGGCAAAGGCCAGGGAGGGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTCAGAGAGGGCGCTaGGGCGTGAGCGAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGQRGR*GVSEGW
Trigger: CCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCA +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTCDQGC*REGGGA
Trigger: TGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGACAGAAGGTGCTCTGTaGGGACTTGGGCCGGGTCAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKTEGAL*GLGPGQ
Trigger: CTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGAGCAGGGGGACATGGTaGGCGGATGTACCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSRGTW*ADVPAL
Trigger: AAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACCCAGCAGGGGGACATaGTGGGCGGATGTACCAGCC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGPSRGT*WADVPA
Trigger: GGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGAAAGGCAGCCTTTGTaGGTACAGGCGGCACTCGGG +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFERQPL*VQAALG
Trigger: CCCGAGTGCCGCCTGTACTCACAAAGGCTGCCTTTC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAGCCTTGGCCTTGGGTaGGGCCTGTCCCGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSLGLG*GLSRPV
Trigger: GACAGGCCGGGACAGGCCTCACCCAAGGCCAAGGCT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRCPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGTGGCAGTTCCCGCTaGTGGAGGAAGAAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSGSSR*WRKKGG
Trigger: CCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCCACT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTCCTGGTGGGAAGTaGCCTCTCCTCTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGPGGK*PLLCGP
Trigger: GGGGCCACAGAGGAGAGGCCACTTCCCACCAGGACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGCTCTGTGGGGACTTaGGCCGGGTCAGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCSVGT*AGSATK
Trigger: CTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGCTCTGTGGGGACTTaGGCCGGGTCAGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTCSVGT*AGSATK
Trigger: CTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTTGCGGCTGTCACTaGCTACAGGCGGCATCTTTC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGCGCH*LQAASF
Trigger: GAAAGATGCCGCCTGTAGCCAGTGACAGCCGCAACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGAGGGCGCTGGGGCGTaGGCGAAGGGTGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLEGAGA*AKGGQE
Trigger: TTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGCCTCAGCTCTGAATaGTTGGCTGATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGLSSE*LADASL
Trigger: AAGGCTGGCATCAGCCAATCATTCAGAGCTGAGGCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGELQI*AQGISG
Trigger: CCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKACPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAPIGCH*SMVPGG
Trigger: CCCACCAGGGACCATGGAGCAGTGGCACCCTATGGG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGCCTCCAGTCCCTaGTCTGGGTCACCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGASSP*SGSPSA
Trigger: AGCACTCGGTGACCCAGAGCAGGGACTGGAGGCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVICPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLCPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCTCGAGGCCAAGCTGTaGGAGACCTGGCATTCCTTC +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTLEAKL*ETWHSF
Trigger: GAAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCCCTCTGCAAAGCCTaGTCTCAGGCTAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPLCKA*SQANKE
Trigger: CTCCTTGTTAGCCTGAGACCAGGCTTTGCAGAGGGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLEHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSRSWLS*CDQGCW
Trigger: CCAGCAGCCCTGATCACACCATGAGAGCCAGGAACG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGAGCCCAGGGCATCTCTaGGCTTTTGGAAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSPGHL*AFGKGS
Trigger: GGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGTTGACGGTGGTGCTTaGGCCTTGTGTGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGVDGGA*ALCARP
Trigger: AGGCCTGGCACACAAGGCCCAAGCACCACCGTCAAC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGCCTCAGCTCTGAATaGTTGGCTGATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGLSSE*LADASL
Trigger: AAGGCTGGCATCAGCCAATCATTCAGAGCTGAGGCC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTGELQI*AQGISG
Trigger: CCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTCCTGTGTTGGCTCCTaGCCCAGCAGGGGGACATGG +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSCVGS*PSRGTW
Trigger: CCATGTCCCCCTGCTGGGTCAGGAGCCAACACAGGA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 2 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGCGCCTCCAGTTATTaGAGTCTGGTGTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGASSY*SLVSWE
Trigger: TTCCCAGGACACCAGACTGCAATAACTGGAGGCGCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGACTTTGTGTGGCCTaGTCTATCACAGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTGLCVA*SITAPG
Trigger: CCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSALEWP*VRCQAR
Trigger: GCGTGCCTGACATCTCACGCACGGCCACTCCAGAGC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCAGTTATTGCAGTCTaGTGTCCTGGGAACACCAGG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPVIAV*CPGNTR
Trigger: CCTGGTGTTCCCAGGACACCAGACTGCAATAACTGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCCACCAAGCGGAGGCTaGTCAGAGAGGGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSPPSGG*SERALG
Trigger: CCCCAGCGCCCTCTCTGACCAGCCTCCGCTTGGTGG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKALQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGCCAGGGAGACAAGCTaGAGCTACAGAAGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFARETS*SYRRCS
Trigger: AGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGGC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTCAGGCCGCATGCTaGTATTCAATTTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGQAAC*YSIWGM
Trigger: CATTCCCCAAATTGAATATCAGCATGCGGCCTGACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACTCTGGCCCCACCACTaGCGGCCCAACCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILWPHH*RPNLSS
Trigger: ACTGGACAGGTTGGGCCGGCAGTGGTGGGGCCAGAG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCTCTGGCCCCACCACTaGCGGCCCAACCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLWPHH*RPNLSS
Trigger: ACTGGACAGGTTGGGCCGGCAGTGGTGGGGCCAGAG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCAGGAAGGCCTGGCCTaGTGCTGTGCTGGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLQEGLA*CCAGPL
Trigger: GAGAGGCCCAGCACAGCAGCAGGCCAGGCCTTCCTG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCAGGAAGGCCTGGCCTaGTGCTGTGCTGGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLQEGLA*CCAGPL
Trigger: GAGAGGCCCAGCACAGCAGCAGGCCAGGCCTTCCTG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKDQGHI*TKEPPE
Trigger: CTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACTACATTGCACCTTCTaGAGGGCTTCAACGGTGGCA +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSLHCTF*RASTVA
Trigger: TGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGCAGTCTGGTGTCCTaGGAACACCAGGAATTCCTG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTCSLVS*EHQEFL
Trigger: CAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGCAGTCTGGTGTCCTaGGAACACCAGGAATTCCTG +
Preference number: 2 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFCSLVS*EHQEFL
Trigger: CAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGAGCCCACAAAGTCATaGGTGGCTGCTCATTTTGAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKEPTKS*VAAHFE
Trigger: CTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGQEEH*ALPIGK
Trigger: CTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGAAGCTGTGCGAGACCTaGCATTCCTTCCAAACCTCA +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKKLCET*HSFQTS
Trigger: TGAGGTTTGGAAGGAATGCCAGGTCTCGCACAGCTT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKHFCMD*AVLTVV
Trigger: CACCACCGTCAACACAGCCCAGTCCATACAGAAATG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGACTCGGGGACCAACCTaGGCCTCCCCCTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRTRGPT*ASPWQE
Trigger: CTCCTGCCAGGGGGAGGCTCAGGTTGGTCCCCGAGT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTCCCGAGGCGGGTGGTaGACCCCACTTATTGCTGGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSRGGW*TPLIAG
Trigger: CCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTCCTGTGTTGGCTCCTaGCCCAGCAGGGGGACATGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSCVGS*PSRGTW
Trigger: CCATGTCCCCCTGCTGGGTCAGGAGCCAACACAGGA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPIGCH*SMVPGG
Trigger: CCCACCAGGGACCATGGAGCAGTGGCACCCTATGGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSPIGCH*SMVPGG
Trigger: CCCACCAGGGACCATGGAGCAGTGGCACCCTATGGG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGTGCCTCCAGTCCCTaGTCTGGGTCACCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGASSP*SGSPSA
Trigger: AGCACTCGGTGACCCAGAGCAGGGACTGGAGGCACC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTDQGHI*TKEPPE
Trigger: CTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSDQGHI*TKEPPE
Trigger: CTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAGTGGCAGTTCCCGCTaGTGGAGGAAGAAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSGSSR*WRKKGG
Trigger: CCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCCACT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGTCAGAGAGGGCGCTaGGGCGTGAGCGAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGQRGR*GVSEGW
Trigger: CCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCACCAAGCGGAGGCTaGTCAGAGAGGGCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPPSGG*SERALG
Trigger: CCCCAGCGCCCTCTCTGACCAGCCTCCGCTTGGTGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGAGCCCACAAAGTCATaGGTGGCTGCTCATTTTGAG +
Preference number: 2 (lower is better)
Translates to: REAGSLLEGREADSLPLTEPTKS*VAAHFE
Trigger: CTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 2 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGGCTGGGGTGGTATTaGCACCTGAGAAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGLGWY*HLRRAG
Trigger: GCCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACGTAGGGACTTTGTGTaGCCTGCTCTATCACAGCTC +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGRRDFV*PALSQL
Trigger: GAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGACCGGCTCTGGAGTaGCCGTGCGTGAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGPALE*PCVRCQ
Trigger: CTGACATCTCACGCACGGCCACTCCAGAGCCGGTCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 90 bp GCCACCACATGCATCTGGGGGAGGCAGCAGGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCACAGCTCCTGGGAGAATTACAGATCT +
Preference number: 2 (lower is better)
Translates to: ATTCIWGRQQGGVGT*CGLLYHSSWENYRS
Trigger: AGATCTGTAATTCTCCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCTCCCCCAGATGCATGTGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGGCTGCTCATTTTaGGGAAGGGCTGGGCATTTT +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGGCSF*GRAGHF
Trigger: AAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGAAAGGCAGCCTTTGTaGGTACAGGCGGCACTCGGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLERQPL*VQAALG
Trigger: CCCGAGTGCCGCCTGTACTCACAAAGGCTGCCTTTC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAAGGGCGGGAGCCCCTaGGGCCTAGACTTCATGTTG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLKGGSP*GLDFML
Trigger: CAACATGAAGTCTAGGCCTCAGGGGCTCCCGCCCTT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGCGCCTCCAGTTATTaGAGTCTGGTGTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGASSY*SLVSWE
Trigger: TTCCCAGGACACCAGACTGCAATAACTGGAGGCGCC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTCCTGGAACCCTTGTaGGAGCTGGGAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSFLEPL*ELGEAG
Trigger: CCCTGCCTCTCCCAGCTCCCACAAGGGTTCCAGGAA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGCAGTTCCCGCTGCTaGAGGAAGAAGGGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGSSRC*RKKGGS
Trigger: GCTCCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAGGGTGACCCGTTCCTaGCTCTCATGGTGTGATCAG +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSRVTRS*LSWCDQ
Trigger: CTGATCACACCATGAGAGCCAGGAACGGGTCACCCT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCCACCTGCCCCTTGTaGGGTGAGGGCTTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPTCPL*GEGLAP
Trigger: AGGAGCCAAGCCCTCACCCCACAAGGGGCAGGTGGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGCCAGGGAGACAAGCTaGAGCTACAGAAGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSARETS*SYRRCS
Trigger: AGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGGC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACTAAGCAGGCGGGGCTaGCTTTCTCAGTGCATATTT +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGLSRRG*LSQCIF
Trigger: AAATATGCACTGAGAAAGCCAGCCCCGCCTGCTTAG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLYHSS*ENYRSE
Trigger: CTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCCAGCAGGGGGACATaGTGGGCGGATGTACCAGCC +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPSRGT*WADVPA
Trigger: GGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACCCTTCTGGATAACATaGCAGTCCCAATTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSPFWIT*QSQFQE
Trigger: TTCCTGAAATTGGGACTGTCATGTTATCCAGAAGGG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGCGCCTCCAGTTATTaGAGTCTGGTGTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGASSY*SLVSWE
Trigger: TTCCCAGGACACCAGACTGCAATAACTGGAGGCGCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCTACATTGCACCTTCTaGAGGGCTTCAACGGTGGCA +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSLHCTF*RASTVA
Trigger: TGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGAGTGGCAGTTCCCGCTaGTGGAGGAAGAAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRSGSSR*WRKKGG
Trigger: CCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCCACT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGQEEH*ALPIGK
Trigger: CTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACTCTATCACAGCTCCTaGGAGAATTACAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: QGQGPALEWPCVRCQARSLYHSS*ENYRSE
Trigger: CTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 90 bp AAGCTTTTCAGGCATGAAACCCATTTCTGTATGGACTGGGCTGTGTaGACGGTGGTGCTTGGGCCTTGTGTGCCAGGCCTCTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: KLFRHETHFCMDWAV*TVVLGPCVPGLSGS
Trigger: GGACCCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAATGGGTTTCATGCCTGAAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGELQI*AQGISG
Trigger: CCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGACTTTGTGTGGCCTaGTCTATCACAGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGLCVA*SITAPG
Trigger: CCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACAAATGCTACTGAAGTaGTGTGTGTGTCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGQMLLK*CVCLCE
Trigger: CTCACAGAGACACACACAGCACTTCAGTAGCATTTG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCCCTCTGCAAAGCCTaGTCTCAGGCTAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPLCKA*SQANKE
Trigger: CTCCTTGTTAGCCTGAGACCAGGCTTTGCAGAGGGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGTCCTGGTGGGAAGTaGCCTCTCCTCTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGPGGK*PLLCGP
Trigger: GGGGCCACAGAGGAGAGGCCACTTCCCACCAGGACC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAGGGTGACCCGTTCCTaGCTCTCATGGTGTGATCAG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLRVTRS*LSWCDQ
Trigger: CTGATCACACCATGAGAGCCAGGAACGGGTCACCCT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCCACCTGCCCCTTGTaGGGTGAGGGCTTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPTCPL*GEGLAP
Trigger: AGGAGCCAAGCCCTCACCCCACAAGGGGCAGGTGGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAGCCCAGGGCATCTCTaGGCTTTTGGAAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSPGHL*AFGKGS
Trigger: GGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCAGCCCAGGGCATCTCTaGGCTTTTGGAAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSSPGHL*AFGKGS
Trigger: GGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTCCCGAGGCGGGTGGTaGACCCCACTTATTGCTGGG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGSRGGW*TPLIAG
Trigger: CCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGTGCCTCCAGTCCCTaGTCTGGGTCACCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGASSP*SGSPSA
Trigger: AGCACTCGGTGACCCAGAGCAGGGACTGGAGGCACC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATGCAGTCTGGTGTCCTaGGAACACCAGGAATTCCTG +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVICSLVS*EHQEFL
Trigger: CAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCAGTTATTGCAGTCTaGTGTCCTGGGAACACCAGG +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPVIAV*CPGNTR
Trigger: CCTGGTGTTCCCAGGACACCAGACTGCAATAACTGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRSCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCA +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGCDQGC*REGGGA
Trigger: TGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRRSWLS*CDQGCW
Trigger: CCAGCAGCCCTGATCACACCATGAGAGCCAGGAACG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 90 bp ATGCATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTaGGGGAATGGTGATGCCACCACATGCATCTGGGGGAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: MHLKSPWSGRMLIFN*GNGDATTCIWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 90 bp CCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGAC +
Preference number: 2 (lower is better)
Translates to: PMHSGWGRSSCRGCP*RDPHVYFMEDGVGD
Trigger: GTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR TCA 90 bp ACCTTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 2 (lower is better)
Translates to: TFINLVQSSGFKIHPGLMASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...CATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGCCTCAGCTCTGAATaGTTGGCTGATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGLSSE*LADASL
Trigger: AAGGCTGGCATCAGCCAATCATTCAGAGCTGAGGCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCAAATGCTACTGAAGTaGTGTGTGTGTCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSQMLLK*CVCLCE
Trigger: CTCACAGAGACACACACAGCACTTCAGTAGCATTTG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGAGCCCACAAAGTCATaGGTGGCTGCTCATTTTGAG +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSEPTKS*VAAHFE
Trigger: CTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGLLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGLQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: GFNGGKALTRVIFALRSLVNPTY*WEKVRP
Trigger: TGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCAC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGQEEH*ALPIGK
Trigger: CTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGAATGCAAATGCTACTaGAGTGCTGTGTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLECKCY*SAVCVS
Trigger: AGAGACACACACAGCACTTCAGTAGCATTTGCATTC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCAAATGCTACTGAAGTaGTGTGTGTGTCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLQMLLK*CVCLCE
Trigger: CTCACAGAGACACACACAGCACTTCAGTAGCATTTG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCCCTCTGCAAAGCCTaGTCTCAGGCTAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPLCKA*SQANKE
Trigger: CTCCTTGTTAGCCTGAGACCAGGCTTTGCAGAGGGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGTGGCTGCTCATTTTaGGGAAGGGCTGGGCATTTT +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGGCSF*GRAGHF
Trigger: AAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRVNPTY*WEKVRP
Trigger: TGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCAC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSEHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGAATGCAAATGCTACTaGAGTGCTGTGTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRECKCY*SAVCVS
Trigger: AGAGACACACACAGCACTTCAGTAGCATTTGCATTC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTGCCAGCCTTGGCCTTaGGTGAGGCCTGTCCCGGCC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSCQPWP*VRPVPA
Trigger: GGCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: RQYREGTQRKASQLSKDRLYHSS*ENYRSE
Trigger: CTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCTCTGGCCCCACCACTaGCGGCCCAACCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLWPHH*RPNLSS
Trigger: ACTGGACAGGTTGGGCCGGCAGTGGTGGGGCCAGAG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGVNPTY*WEKVRP
Trigger: TGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCAC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGCAGTTCCCGCTGCTaGAGGAAGAAGGGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGSSRC*RKKGGS
Trigger: GCTCCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGACCCAGGTGGGCCTaGAGGTGGGATCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGPRWA*RWDPVG
Trigger: ACCCACAGGATCCCACCTCCAGGCCCACCTGGGTCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTCCCGAGGCGGGTGGTaGACCCCACTTATTGCTGGG +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSSRGGW*TPLIAG
Trigger: CCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGTTCCTCCACGCCCCTaGGCTGGTGTGACTCCAGAG +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSVPPRP*AGVTPE
Trigger: CTCTGGAGTCACACCAGCGCAGGGGCGTGGAGGAAC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGGCTGGGGTGGTATTaGCACCTGAGAAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGLGWY*HLRRAG
Trigger: GCCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSWTGLC*RWCLGL
Trigger: AAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGTGGCTGCTCATTTTaGGGAAGGGCTGGGCATTTT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGGCSF*GRAGHF
Trigger: AAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTG +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSHFCMD*AVLTVV
Trigger: CACCACCGTCAACACAGCCCAGTCCATACAGAAATG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGAATGCAAATGCTACTaGAGTGCTGTGTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSECKCY*SAVCVS
Trigger: AGAGACACACACAGCACTTCAGTAGCATTTGCATTC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAAATGGATACATATGTaGCCCGCAGACAGTATACAC +
Preference number: 2 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSKWIHM*PADSIH
Trigger: GTGTATACTGTCTGCGGGGCACATATGTATCCATTT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp CTGCATCCCCCAGACCATGAGCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCT +
Preference number: 3 (lower is better)
Translates to: LHPPDHEPGTGQ*IQGGDAVPAVA
Trigger: AGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR CCA 72 bp CAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTaGAGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: QCSLGEPSTTWK*REAGSLLEGRE
Trigger: CTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp ACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTaGAAGTGGAGGGAAGCTGGGTCGCTGCTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: THQCSLGEPSTT*KWREAGSLLEG
Trigger: CCCTTCCAGCAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCACGCAGGGTCCTGTGTaGGCTCCTGACCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: REAGSLLEGREADSLPLTTQGPV*APDPAG
Trigger: CCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp TCCAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTaGGATGTCAGGCACGCTCACACGCAGGGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: SKDRDRLWSGRA*DVRHAHTQGPV
Trigger: CACAGGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp GCTTTCCAAGGACAGGGACCGGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGCTCACACGCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: AFQGQGPALEWP*VRCQARSHAGS
Trigger: GGACCCTGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGAAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGAAGAGCACTGGGCCTaGCCCATAGGAAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKEEHWA*PIGKAQ
Trigger: CTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: QGQGPALEWPCVRCQARSRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: REAGSLLEGREADSLPLTVLCGD*GRVSNQ
Trigger: TTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCAC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAACGCAGGGTCCTGTGTaGGCTCCTGACCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGTQGPV*APDPAG
Trigger: CCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTGGTGCTTGGGCCTaGTGTGCCAGGCCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGGAWA*CARPLW
Trigger: CCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp CCCAGGCCTAGGGATCATAGCCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGGCAGGAAGAGCACTGG +
Preference number: 3 (lower is better)
Translates to: PRPRDHSPIGCH*SMVPGGQEEHW
Trigger: CCAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACCCTATGGGGCTATGATCCCTAGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp CACTGCTCCATGGTCCCTGGTGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAGGCCCAGCCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: HCSMVPGGQEEH*ALPIGKAQPSP
Trigger: GGGACTTGGCTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp CCAGGGAGACAAGCTGGAGCTACAGAAGGTGCTCTGTaGGGACTTGGGCCGGGTCAGCAACCAAGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: PGRQAGATEGAL*GLGPGQQPSPH
Trigger: GTGGGGGCTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 3 (lower is better)
Translates to: QGQGPALEWPCVRCQARSSLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGAAGAGCACTGGGCCTaGCCCATAGGAAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGEEHWA*PIGKAQ
Trigger: CTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 3 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGCCTAGACTTCATGTaGGGGGTCCTGGTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGLDFM*GVLVGS
Trigger: ACTTCCCACCAGGACCCCCAACATGAAGTCTAGGCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGCCTAGACTTCATGTaGGGGGTCCTGGTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGLDFM*GVLVGS
Trigger: ACTTCCCACCAGGACCCCCAACATGAAGTCTAGGCC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWVLCGD*GRVSNQ
Trigger: TTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCAC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 3 (lower is better)
Translates to: REAGSLLEGREADSLPLTGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp GAGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTaGCTCTCTACCCCTCACCTCTGCAAGGAACTGAGG +
Preference number: 3 (lower is better)
Translates to: EGSWVAAGREGG*LSTPHLCKELR
Trigger: CCTCAGTTCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp AGGTGGGATCCTGTGGGTTTTCAGAGCACCCACCAGTaGTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: RWDPVGFQSTHQ*SLGEPSTTWKW
Trigger: CCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTGAAAACCCACAGGATCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 3 (lower is better)
Translates to: CQHGAVSIEKELNARLHSMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp TTCACAGCTTTCCAAGGACAGGGACCGGCTCTGGAGTaGCCGTGCGTGAGATGTCAGGCACGCTCACACGCA +
Preference number: 3 (lower is better)
Translates to: FTAFQGQGPALE*PCVRCQARSHA
Trigger: TGCGTGTGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTGGAAAGCTGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp TTTCTGTATGGACTGGGCTGTGTTGACGGTGGTGCTTaGGCCTTGTGTGCCAGGCCTCTCTGGGTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: FLYGLGCVDGGA*ALCARPLWVPS
Trigger: GGAGGGGACCCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 3 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKASLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: REAGSLLEGREADSLPLTGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCCCAGAACCCCTACATaGCACCTTCTGCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWPRTPT*HLLQGF
Trigger: GAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTACGCAGGGTCCTGTGTaGGCTCCTGACCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLTQGPV*APDPAG
Trigger: CCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp CTGGGGGAGGCAGCAGGGAGGCGTAGGGACTTTGTGTaGCCTGCTCTATCACAGCTCCTGGGAGAATTACAG +
Preference number: 3 (lower is better)
Translates to: LGEAAGRRRDFV*PALSQLLGELQ
Trigger: CTGTAATTCTCCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp CCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTaGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PDFSATLMGISR*TPAVAHVSLSA
Trigger: GGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: CQHGAVSIEKELNARLHSVLCGD*GRVSNQ
Trigger: TTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCAC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: REAGSLLEGREADSLPLTGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 3 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 3 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp AAAGTATTCCCGAGGCGGGTGGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCAAGGGCAGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: KVFPRRVVNPTY*WEKVRPRAGLG
Trigger: CCCCAGCCCTGCCCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAATACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp CCATCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTaGGACGCTAATGGGCATCTCCAGGTGGACTCCAGC +
Preference number: 3 (lower is better)
Translates to: PSEFLAGTSRLQ*DANGHLQVDSS
Trigger: GCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR CCA 72 bp ATTGCAGTCTGGTGTCCTGGGAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGGGAGAGGCAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: IAVWCPGNTRNS*NPCGSWERQGR
Trigger: TCTGCCCTGCCTCTCCCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp GTGGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTaGTGTCCTGGGAACACCAGGAATTCCTGGAACCCT +
Preference number: 3 (lower is better)
Translates to: VGRKEAPPVIAV*CPGNTRNSWNP
Trigger: AGGGTTCCAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAGGCGCCTCCAGTTATaGCAGTCTGGTGTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLRRLQL*QSGVLG
Trigger: TCCCAGGACACCAGACTGCAATAACTGGAGGCGCCT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAAGGCGCCTCCAGTTATaGCAGTCTGGTGTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIRRLQL*QSGVLG
Trigger: TCCCAGGACACCAGACTGCAATAACTGGAGGCGCCT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 3 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 3 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp GTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTaGTGCCACCACATGCATCTGGGGGAGGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: VRPHADIQFGEW*CHHMHLGEAAG
Trigger: CCCTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACCATTCCCCAAATTGAATATCAGCATGCGGCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp GGCATGAAACCCATTTCTGTATGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTTGTGTGCCAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GMKPISVWTGLC*RWCLGLVCQAS
Trigger: AGAGGCCTGGCACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAATGGGTTTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp CACCGGCCAATGCATTCAGGGTGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGAGACCCACATGTTTAT +
Preference number: 3 (lower is better)
Translates to: HRPMHSGWGRSS*RGCPLRDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR TCA 72 bp CAAGGAGCCCACAAAGTCATGGGTGGCTGCTCATTTTaGGGAAGGGCTGGGCATTTTCTGAGCCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: QGAHKVMGGCSF*GRAGHFLSLRG
Trigger: CCCTCTGAGGCTCAGAAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp CAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATTTCATGGAAGACGGAG +
Preference number: 3 (lower is better)
Translates to: QGGDAVPAVAVL*ETHMFISWKTE
Trigger: CTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 3 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR GCA 72 bp CTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAGGTAACAGCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: LQRWQSPDQGHI*TKEPPEVTASP
Trigger: GGGACTTGCTGTTACCTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp GTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAGCCCAGGGCATCTCTG +
Preference number: 3 (lower is better)
Translates to: VGTLCGLLYHSS*ENYRSEPRASL
Trigger: CAGAGATGCCCTGGGCTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp GTAAAATTAGTGACTCTAGAGGAAAGGCAGCCTTTGTaGGTACAGGCGGCACTCGGGGACCAACCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: VKLVTLEERQPL*VQAALGDQPEP
Trigger: AGGCTCAGGTTGGTCCCCGAGTGCCGCCTGTACTCACAAAGGCTGCCTTTCCTCTAGAGTCACTAATTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp CCTGCTCTATCACAGCTCCTGGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGGCTTTTGGAAAGGGTT +
Preference number: 3 (lower is better)
Translates to: PALSQLLGELQI*AQGISGLLERV
Trigger: AACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp CATATGTGCCCCGCAGACAGTATACACGCAGGGATGTaGCTGAGCCACAGTGACATAGCAAACCCAACAGCT +
Preference number: 3 (lower is better)
Translates to: HMCPADSIHAGM*LSHSDIANPTA
Trigger: AGCTGTTGGGTTTGCTATGTCACTGTGGCTCAGTCACATCCCTGCGTGTATACTGTCTGCGGGGCACATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCCACATGTTTATTTCAT +
Preference number: 3 (lower is better)
Translates to: ANAFRVGTQFLP*LSFERPTCLFH
Trigger: ATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 3 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGSLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 3 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 3 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp AAGCTTTTCAGGCATGAAACCCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTGCTTGGGCCTTGTGTG +
Preference number: 3 (lower is better)
Translates to: KLFRHETHFCMD*AVLTVVLGPCV
Trigger: CACACAAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCATACAGAAATGGGTTTCATGCCTGAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp AGCCACAGTGACATAGCAAACCCAACAGCTGGCTTGTaGAGCCATCGTGATCCCAACAAGGTCTATGTTAGC +
Preference number: 3 (lower is better)
Translates to: SHSDIANPTAGL*SHRDPNKVYVS
Trigger: GCTAACATAGACCTTGTTGGGATCACGATGGCTTCACAAGCCAGCTGTTGGGTTTGCTATGTCACTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 3 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp AGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGTGGAGAACATGGTAGG +
Preference number: 3 (lower is better)
Translates to: RPTCLFHGRRSW*LQEAPCGEHGR
Trigger: CCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGAAGAGCACTGGGCCTaGCCCATAGGAAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSEEHWA*PIGKAQ
Trigger: CTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCTGAGGCCTGTAGGGTaGCGGCTGTCACTGGCTACA +
Preference number: 3 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLRPVG*RLSLAT
Trigger: TGTAGCCAGTGACAGCCGCAACCCTACAGGCCTCAG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCCCAGAACCCCTACATaGCACCTTCTGCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSPRTPT*HLLQGF
Trigger: GAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CCA 72 bp TTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAAATaGATACATATGTGCCCCGCAGACAGTATACACGCA +
Preference number: 3 (lower is better)
Translates to: LAVVYTDSFSSK*IHMCPADSIHA
Trigger: TGCGTGTATACTGTCTGCGGGGCACATATGTATCCATTTAGAGCTAAAGGAATCAGTGTACACTACAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR TCA 72 bp CATGGTGGGCGGATGTACCAGCCCTTCTGGATAACATaGCAGTCCCAATTTCAGGAAAGTTTTTATTTTAAA +
Preference number: 3 (lower is better)
Translates to: HGGRMYQPFWIT*QSQFQESFYFK
Trigger: TTTAAAATAAAAACTTTCCTGAAATTGGGACTGTCATGTTATCCAGAAGGGCTGGTACATCCGCCCACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGCTGCTCCCCACCCCTaGCGGCGGCACTGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKAAPHP*RRHWRA
Trigger: AGCCCGCCAGTGCCGCCGTCAGGGGTGGGGAGCAGC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGCCTCTCTGCGGCCGTaGGGATGGCGATGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKASLRP*GWRWRL
Trigger: GAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKCPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGCCTCTCTGCGGCCGTaGGGATGGCGATGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSASLRP*GWRWRL
Trigger: GAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCAGCGGATCCTCGTTTaGGGCGGGCCAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFQRILV*GGPGPG
Trigger: TCCCGGCCCTGGCCCGCCGCAAACGAGGATCCGCTG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACAGCGGATCCTCGTTTaGGGCGGGCCAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSQRILV*GGPGPG
Trigger: TCCCGGCCCTGGCCCGCCGCAAACGAGGATCCGCTG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR GCA 90 bp CTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGGGTCTCCGCCTGCCTaGAGGGCCACGCGCGCACTC +
Preference number: 4 (lower is better)
Translates to: LQVDSSRCSRQSLCLAFPGSPPA*RATRAL
Trigger: GAGTGCGCGCGTGGCCCTGCAGGCAGGCGGAGACCC...CGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACCCTGCCTTTCGGGCTaGGGCGCTCAGCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGPCLSG*GAQPGA
Trigger: GGCTCCCGGCTGAGCGCCCCAGCCCGAAAGGCAGGG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCAGTGCTCCCTCGGTaGGCCCAGCACCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPVLPR*AQHHLE
Trigger: TTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAGGGCACAGTCAGCTTaGGGAGGGCGCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTRAQSA*GGRAPP
Trigger: GGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTCCCGAGGCGGGTGGTaGACCCCACTTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSRGGW*TPLIAG
Trigger: CCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCCCGCACCCAGACCCTaGCTTTCGGGCTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAPAPRP*LSGWGA
Trigger: AGCGCCCCAGCCCGAAAGGCAGGGTCTGGGTGCGGG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKPIGCH*SMVPGG
Trigger: CCCACCAGGGACCATGGAGCAGTGGCACCCTATGGG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKACPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAACCAAGCCCCCACCTaGCCCTTGTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFNQAPT*PLWGEG
Trigger: GCCCTCACCCCACAAGGGGCAGGTGGGGGCTTGGTT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTTCGCGGCGACAGGGTaGGGCGTCTGCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWFAATG*GVCAAT
Trigger: AGTGGCGGCGCAGACGCCGCACCCTGTCGCCGCGAA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSAGSA*GNFPLA
Trigger: TGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWTMPAK*PGLSAA
Trigger: GGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGCCAGCCTTGGCCTTaGGTGAGGCCTGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGCQPWP*VRPVPA
Trigger: GGCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACCCACCTGCCCCTTGTaGGGTGAGGGCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSPTCPL*GEGLAP
Trigger: AGGAGCCAAGCCCTCACCCCACAAGGGGCAGGTGGG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGACCGGCTCTGGAGTaGCCGTGCGTGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGPALE*PCVRCQ
Trigger: CTGACATCTCACGCACGGCCACTCCAGAGCCGGTCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGACCCAGGTGGGCCTaGAGGTGGGATCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGPRWA*RWDPVG
Trigger: ACCCACAGGATCCCACCTCCAGGCCCACCTGGGTCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 72 bp GACAAGCTGGAGCTACAGAAGGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAAGCCCCCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DKLELQKVLCGD*GRVSNQAPTCP
Trigger: GGGGCAGGTGGGGGCTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGTAGCTCCAGCTTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGACTCGGGGACCAACCTaGGCCTCCCCCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWTRGPT*ASPWQE
Trigger: CTCCTGCCAGGGGGAGGCTCAGGTTGGTCCCCGAGT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGAGCCTTGGCCTTGGGTaGGGCCTGTCCCGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQSLGLG*GLSRPV
Trigger: GACAGGCCGGGACAGGCCTCACCCAAGGCCAAGGCT...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGGAGTGGCCGTGCGTaGGATGTCAGGCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSWSGRA*DVRHAH
Trigger: GTGAGCGTGCCTGACATCTCACGCACGGCCACTCCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGAAGGGAGGGAGGCTaGCTCTCTACCCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGREGG*LSTPHL
Trigger: GAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTCCTGGTAGGGAATaGTCTGCGGGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGPGRE*SAGSAW
Trigger: CCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAVARPL*GREDGD
Trigger: ATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCAC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWVARPL*GREDGD
Trigger: ATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCAC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQVARPL*GREDGD
Trigger: ATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCAC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGTGGCAGTTCCCGCTaGTGGAGGAAGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFSGSSR*WRKKGG
Trigger: CCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCCACT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAAGTGGCAGTTCCCGCTaGTGGAGGAAGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSSGSSR*WRKKGG
Trigger: CCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCCACT...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFALEWP*VRCQAR
Trigger: GCGTGCCTGACATCTCACGCACGGCCACTCCAGAGC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGTTCCTCCACGCCCCTaGGCTGGTGTGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFVPPRP*AGVTPE
Trigger: CTCTGGAGTCACACCAGCGCAGGGGCGTGGAGGAAC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGCTTGGGCCTTGTGTaGCAGGCCTCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCLGLV*QASLGP
Trigger: GGGACCCAGAGAGGCCTGGCACACAAGGCCCAAGCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTGCTTGGGCCTTGTGTaGCAGGCCTCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTCLGLV*QASLGP
Trigger: GGGACCCAGAGAGGCCTGGCACACAAGGCCCAAGCA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATTACAGCCTCCTCACCAGGGTCTCCGCCTaGCTGCAGGGCCACGCGCGC +
Preference number: 4 (lower is better)
Translates to: VAHVSLSAWRFRSHYSLLTRVSA*LQGHAR
Trigger: GCGCGCGTGGCCCTGCAGGCAGGCGGAGACCCTGGT...GAGGAGGCTGTAATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTSAGSA*GNFPLA
Trigger: TGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCGATGGCGCCTCCCATaGAGTGGCCCAGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKRWRLP*SGPEGR
Trigger: TCTTCCTTCTGGGCCACTCCATGGGAGGCGCCATCG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGPPDFSATLMGISRWTPTMPAK*PGLSAA
Trigger: GGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGT...TGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSEHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGCCTGGGGCAGGGCTaGGGGTGCCTCCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGLGQG*GCLQSL
Trigger: CAGGGACTGGAGGCACCCCCAGCCCTGCCCCAGGCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGGCTGGGGTGGTATTaGCACCTGAGAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGLGWY*HLRRAG
Trigger: GCCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCDQGC*REGGGA
Trigger: TGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGRRVLC*LLTQQG
Trigger: CCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATCCACGCCCCTGCGCTaGTGTGACTCCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSSTPLR*CDSRAQ
Trigger: CTGAGCTCTGGAGTCACACCAGCGCAGGGGCGTGGA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGAGCACCACCTGGAAGTaGAGGGAAGCTGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKSTTWK*REAGSL
Trigger: CAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGAGCCCAGCACCACCTaGAAGTGGAGGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSEPSTT*KWREAG
Trigger: CCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCCTGCATCCCCCAGACCATGAGCCGGGCACCGGCCAATGCATTCAGGGTGGGGATGGGCATCTCCAGGTaGACTCCAGCCGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ACIPQTMSRAPANAFRVGMGISR*TPAVAH
Trigger: GTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCAT...CCCCACCCTGAATGCATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKTVRLH*PGEGGP
Trigger: AGGACCTCCCTCACCTGGTCAATGCAGACGGACAGT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 4 (lower is better)
Translates to: QGPPDFSATLMGISRWTPASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...TGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAAGGGCGGGAGCCCCTaGGGCCTAGACTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTKGGSP*GLDFML
Trigger: CAACATGAAGTCTAGGCCTCAGGGGCTCCCGCCCTT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGGAGTGGCCGTGCGTaGGATGTCAGGCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGWSGRA*DVRHAH
Trigger: GTGAGCGTGCCTGACATCTCACGCACGGCCACTCCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGAAGGGAGGGAGGCTaGCTCTCTACCCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGREGG*LSTPHL
Trigger: GAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWPGTGQ*IQGGDA
Trigger: TGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQPGTGQ*IQGGDA
Trigger: TGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCTCTGGCCCCACCACTaGCGGCCCAACCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQLWPHH*RPNLSS
Trigger: ACTGGACAGGTTGGGCCGGCAGTGGTGGGGCCAGAG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCAGGAAGGCCTGGCCTaGTGCTGTGCTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQQEGLA*CCAGPL
Trigger: GAGAGGCCCAGCACAGCAGCAGGCCAGGCCTTCCTG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGAACCAAGCCCCCACCTaGCCCTTGTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQNQAPT*PLWGEG
Trigger: GCCCTCACCCCACAAGGGGCAGGTGGGGGCTTGGTT...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTCGAGGCCAAGCTGTaGGAGACCTGGCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLEAKL*ETWHSF
Trigger: GAAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCCCCTCCCTGGCCTTTaGCTTCCTCTCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFPLPGL*LPLTFS
Trigger: CGAGAAGGTGAGAGGAAGGCAAAGGCCAGGGAGGGG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCAGAGCACCCACCAGTaGTCCCTCGGTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAQSTHQ*SLGEPS
Trigger: GCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCACGCACAAATGCGGGTaGCCAAGGCAAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTTHKCG*PRQSRP
Trigger: GGGGCGACTTTGCCTTGGGCACCCGCATTTGTGCGT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRTMPAK*PGLSAA
Trigger: GGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGCACGCTGGAGTCGATaGGCCCGAGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTARWSR*ARGTSL
Trigger: CAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTTCCTGGAACCCTTGTaGGAGCTGGGAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFFLEPL*ELGEAG
Trigger: CCCTGCCTCTCCCAGCTCCCACAAGGGTTCCAGGAA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGTCAGAGAGGGCGCTaGGGCGTGAGCGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGQRGR*GVSEGW
Trigger: CCACCCTTCGCTCACGCCCCAGCGCCCTCTCTGACC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGAGCACAGAGCCCTCTaGCCCCACCACTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPREHRAL*PHHCRP
Trigger: GGGCCGGCAGTGGTGGGGCCAGAGGGCTCTGTGCTC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTLLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTLQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCCCACCTGCCCCTTGTaGGGTGAGGGCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWPTCPL*GEGLAP
Trigger: AGGAGCCAAGCCCTCACCCCACAAGGGGCAGGTGGG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAGCAGGGGGACATGGTaGGCGGATGTACCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTSRGTW*ADVPAL
Trigger: AAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQRRVLC*LLTQQG
Trigger: CCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCCGCCACTTTATCCCTaGGCCGGCTCGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLPPLYP*AGSAAG
Trigger: CCCCGCCGCCGAGCCGGCCCAGGGATAAAGTGGCGG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGTTGGTTTGGGGGCTaGTGCGAAGGAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFSWFGG*CEGAGR
Trigger: CCTCCCTGCTCCTTCGCACCAGCCCCCAAACCAACT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCCTCTCTGCGGCCGTaGGGATGGCGATGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPASLRP*GWRWRL
Trigger: GAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGAGGGCGCTGGGGCGTaGGCGAAGGGTGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLEGAGA*AKGGQE
Trigger: TTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGAGGGCGCTGGGGCGTaGGCGAAGGGTGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSEGAGA*AKGGQE
Trigger: TTCCTGCCCACCCTTCGCTCACGCCCCAGCGCCCTC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTCCTGTGTTGGCTCCTaGCCCAGCAGGGGGACATGG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWSCVGS*PSRGTW
Trigger: CCATGTCCCCCTGCTGGGTCAGGAGCCAACACAGGA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGAAGGGAGGGAGGCTaGCTCTCTACCCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGREGG*LSTPHL
Trigger: GAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCCGCACCCAGACCCTaGCTTTCGGGCTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPAPRP*LSGWGA
Trigger: AGCGCCCCAGCCCGAAAGGCAGGGTCTGGGTGCGGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFWGRSS*RGCPLR
Trigger: TCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSWGRSS*RGCPLR
Trigger: TCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGCGCCTCCAGTTATTaGAGTCTGGTGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGASSY*SLVSWE
Trigger: TTCCCAGGACACCAGACTGCAATAACTGGAGGCGCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFSPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSLWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAACGCACAAATGCGGGTaGCCAAGGCAAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGTHKCG*PRQSRP
Trigger: GGGGCGACTTTGCCTTGGGCACCCGCATTTGTGCGT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGCGGGGAGCGGCGCTaGGATTCTCCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGGERR*DSPLLV
Trigger: AACTAGTAGTGGAGAATCGCAGCGCCGCTCCCCGCC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGTCCGTGGCCAACATaGTCGTGGGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGCPWPT*SWANTS
Trigger: GCTGGTGTTCGCCCACGACCATGTTGGCCACGGACA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCCTTCGCTCTGTCCGTaGCCAACATGGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAPSLCP*PTWSWA
Trigger: CGCCCACGACCATGTTGGCCACGGACAGAGCGAAGG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGCGCCTCCCATGGAGTaGCCCAGAAGGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGAPPME*PRRKTG
Trigger: TCCTGTCTTCCTTCTGGGCCACTCCATGGGAGGCGC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGCGATGGCGCCTCCCATaGAGTGGCCCAGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LQVDSSRCSRQSLCLAFPRWRLP*SGPEGR
Trigger: TCTTCCTTCTGGGCCACTCCATGGGAGGCGCCATCG...CGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPTMPAK*PGLSAA
Trigger: GGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSERAR*SRWARG
Trigger: CCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CCA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTAAGGGCACAGTCAGCTTaGGGAGGGCGCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLRAQSA*GGRAPP
Trigger: GGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCT...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACCAATGCATTCAGGGTaGGGACGCAGTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSPMHSG*GRSSCR
Trigger: ACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTGQEEH*ALPIGK
Trigger: CTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGGGCTGGGGTGGTATTaGCACCTGAGAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQGLGWY*HLRRAG
Trigger: GCCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGCTCTGTGGGGACTTaGGCCGGGTCAGCAACCAAG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGCSVGT*AGSATK
Trigger: CTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGCCAGGGAGACAAGCTaGAGCTACAGAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKARETS*SYRRCS
Trigger: AGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGGC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTCCACGCCCCTGCGCTaGTGTGACTCCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWSTPLR*CDSRAQ
Trigger: CTGAGCTCTGGAGTCACACCAGCGCAGGGGCGTGGA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGAGGTGGGATCCTGTaGGTTTTCAGAGCACCCACC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGGGIL*VFRAPT
Trigger: GGTGGGTGCTCTGAAAACCCACAGGATCCCACCTCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGGTGGGCCTGGAGGTaGGATCCTGTGGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFRWAWR*DPVGFQ
Trigger: CTGAAAACCCACAGGATCCCACCTCCAGGCCCACCT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTGCACCGGGGAAGGTaGGGACTAGAAAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLHRGR*GLERWS
Trigger: ACTCCATCTTTCTAGTCCCCACCTTCCCCGGTGCAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCATCGGAAATGCCGCTaGGAAAACCGGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTHRKCR*ENRVGF
Trigger: GAAGCCCACCCGGTTTTCCCAGCGGCATTTCCGATG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCAGGGGCCCGGGAAACTaGGAAACTAGCTCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKARGPGN*ETSSAH
Trigger: GTGCGCGGAGCTAGTTTCCCAGTTTCCCGGGCCCCT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKAATHP*RKRGSQ
Trigger: CTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSEPEAK*VPCRRS
Trigger: ACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCCTGCATCCCCCAGACCATGAGCCGGGCACCGGCCAATGCATTCAGGGTGGGGGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTC +
Preference number: 4 (lower is better)
Translates to: ACIPQTMSRAPANAFRVGADQGV*VINVDL
Trigger: GAGGTCGACATTTATAACTCAGACCCCCTGATCTGC...CCCCACCCTGAATGCATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATTACAGCCTCCTCGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VAHVSLSAWRFRSHYSLLGALHP*DGIQQL
Trigger: CAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCC...GAGGAGGCTGTAATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCCTCAGAGGGGCACGTaGGTCTGCCCTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSPQRGT*VCPGEL
Trigger: CAGCTCCCCAGGGCAGACTCACGTGCCCCTCTGAGG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCACTCGGGGACCAACCTaGGCCTCCCCCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSTRGPT*ASPWQE
Trigger: CTCCTGCCAGGGGGAGGCTCAGGTTGGTCCCCGAGT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGCCTCAGCTCTGAATaGTTGGCTGATGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTGLSSE*LADASL
Trigger: AAGGCTGGCATCAGCCAATCATTCAGAGCTGAGGCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCAAGGGCGGGAGCCCCTaGGGCCTAGACTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAKGGSP*GLDFML
Trigger: CAACATGAAGTCTAGGCCTCAGGGGCTCCCGCCCTT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGELQI*AQGISG
Trigger: CCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGCCCCTGCGCTGGTGTaGCTCCAGAGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAAPALV*LQSSEC
Trigger: ACATTCTGAGCTCTGGAGTCACACCAGCGCAGGGGC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGCTCAGCCGGGAGCCTaGTTCCAGCTCCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSAQPGA*FQLPPA
Trigger: TGCCGGTGGGAGCTGGAAGCAGGCTCCCGGCTGAGC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGCTCAGCCGGGAGCCTaGTTCCAGCTCCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLAQPGA*FQLPPA
Trigger: TGCCGGTGGGAGCTGGAAGCAGGCTCCCGGCTGAGC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPVARPL*GREDGD
Trigger: ATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCAC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACTCGAGGCCAAGCTGTaGGAGACCTGGCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGLEAKL*ETWHSF
Trigger: GAAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCCCCTCCCTGGCCTTTaGCTTCCTCTCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQPLPGL*LPLTFS
Trigger: CGAGAAGGTGAGAGGAAGGCAAAGGCCAGGGAGGGG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCAGAGCACCCACCAGTaGTCCCTCGGTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRQSTHQ*SLGEPS
Trigger: GCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGCTTCGCCGGGTGTCTaGACCGGGGAAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLASPGV*TGEGGD
Trigger: GTCCCCACCTTCCCCGGTGCAGACACCCGGCGAAGC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGCTTCGCCGGGTGTCTaGACCGGGGAAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSASPGV*TGEGGD
Trigger: GTCCCCACCTTCCCCGGTGCAGACACCCGGCGAAGC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGCTGTCATCGGAAATaGCGCTGGGAAAACCGGGTG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFSCHRK*RWENRV
Trigger: CACCCGGTTTTCCCAGCGGCATTTCCGATGACAGCT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFGGTFL*HAGRVF
Trigger: GAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGATCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERSAGSA*GNFPLA
Trigger: TGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGA...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCCCTTGGGTGTGCCTGTaGGTTTCCAGTACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTPWVCL*VSSTCR
Trigger: TCTGCAGGTACTGGAAACCCACAGGCACACCCAAGG...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCCTTGGGTGTGCCTGTaGGTTTCCAGTACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFPWVCL*VSSTCR
Trigger: TCTGCAGGTACTGGAAACCCACAGGCACACCCAAGG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTGGCCAACATGGTCGTaGGCGAACACCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAWPTWS*ANTSRS
Trigger: GGACCTGCTGGTGTTCGCCCACGACCATGTTGGCCA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGGCCAACATGGTCGTaGGCGAACACCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AFRVGTQFLPWLSFERPTWPTWS*ANTSRS
Trigger: GGACCTGCTGGTGTTCGCCCACGACCATGTTGGCCA...TGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCCCTTCGCTCTGTCCGTaGCCAACATGGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FSATLMGISRWTPAVAHVPSLCP*PTWSWA
Trigger: CGCCCACGACCATGTTGGCCACGGACAGAGCGAAGG...GACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAAGGGCACAGTCAGCTTaGGGAGGGCGCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIRAQSA*GGRAPP
Trigger: GGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAGGGCACAGTCAGCTTaGGGAGGGCGCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLRAQSA*GGRAPP
Trigger: GGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAGGGCACAGTCAGCTTaGGGAGGGCGCGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPRAQSA*GGRAPP
Trigger: GGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTTCCTGGAACCCTTGTaGGAGCTGGGAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWFLEPL*ELGEAG
Trigger: CCCTGCCTCTCCCAGCTCCCACAAGGGTTCCAGGAA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKALLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTGCCAGCCTTGGCCTTaGGTGAGGCCTGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPCQPWP*VRPVPA
Trigger: GGCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGCAGTTCCCGCTGCTaGAGGAAGAAGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGSSRC*RKKGGS
Trigger: GCTCCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAGGGTGACCCGTTCCTaGCTCTCATGGTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFRVTRS*LSWCDQ
Trigger: CTGATCACACCATGAGAGCCAGGAACGGGTCACCCT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGACAGAAGGTGCTCTGTaGGGACTTGGGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWTEGAL*GLGPGQ
Trigger: CTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCACAGAAGGTGCTCTGTaGGGACTTGGGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKATEGAL*GLGPGQ
Trigger: CTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAGCCCAGGGCATCTCTaGGCTTTTGGAAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTSPGHL*AFGKGS
Trigger: GGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCCCAGCAGGGGGACATaGTGGGCGGATGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRPSRGT*WADVPA
Trigger: GGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTCCACGCCCCTGCGCTaGTGTGACTCCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSTPLR*CDSRAQ
Trigger: CTGAGCTCTGGAGTCACACCAGCGCAGGGGCGTGGA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGACCCAGGTGGGCCTaGAGGTGGGATCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGPRWA*RWDPVG
Trigger: ACCCACAGGATCCCACCTCCAGGCCCACCTGGGTCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTLAAQG*ALSQQG
Trigger: TCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGALHP*DGIQQL
Trigger: CAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGALHP*DGIQQL
Trigger: CAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGALHP*DGIQQL
Trigger: CAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGRRSW*LQEAPC
Trigger: ACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGAAAGGCAGCCTTTGTaGGTACAGGCGGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSERQPL*VQAALG
Trigger: CCCGAGTGCCGCCTGTACTCACAAAGGCTGCCTTTC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCAATTTGGGGAATGGTaGTGCCACCACATGCATCTG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKQFGEW*CHHMHL
Trigger: CAGATGCATGTGGTGGCATCACCATTCCCCAAATTG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSWTGLC*RWCLGL
Trigger: AAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCCAGTGCTCCCTCGGTaGGCCCAGCACCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSPVLPR*AQHHLE
Trigger: TTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGTGACTGAGCCACAGTaGCATAGCAAACCCAACAGC +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFVTEPQ*HSKPNS
Trigger: GCTGTTGGGTTTGCTATGTCACTGTGGCTCAGTCAC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGTGTAATCCCCAATGTTaGAGGTGGGGCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LQVDSSRCSRQSLCLAFPCNPQC*RWGLVG
Trigger: TCCCACCAGGCCCCACCTTCAACATTGGGGATTACA...CGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGTCCTGGTAGGGAATaGTCTGCGGGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGPGRE*SAGSAW
Trigger: CCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGTCCTGGTAGGGAATaGTCTGCGGGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGPGRE*SAGSAW
Trigger: CCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCGGTCCTGGTAGGGAATaGTCTGCGGGGTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SEFLAGTSRLQCDANGHLGPGRE*SAGSAW
Trigger: CCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACC...GAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCACACCTTCAGCCCTaGCCGGCAGATCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIAHLQP*PADQGV
Trigger: GACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCACACCTTCAGCCCTaGCCGGCAGATCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPAHLQP*PADQGV
Trigger: GACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPPGTGQ*IQGGDA
Trigger: TGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCCCATAGGGTGCCACTaGTCCATGGTCCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRPIGCH*SMVPGG
Trigger: CCCACCAGGGACCATGGAGCAGTGGCACCCTATGGG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCATAGCCCCATAGGGTaGCACTGCTCCATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQHSPIG*HCSMVP
Trigger: AGGGACCATGGAGCAGTGGCACCCTATGGGGCTATG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCAGGAAGGCCTGGCCTaGTGCTGTGCTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPQEGLA*CCAGPL
Trigger: GAGAGGCCCAGCACAGCAGCAGGCCAGGCCTTCCTG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTGTCCCGGCCTGTCCTaGTGTGGCCTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRCPGLS*CGLGQG
Trigger: GCCCTGCCCCAGGCCACAGCAGGACAGGCCGGGACA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAACCAAGCCCCCACCTaGCCCTTGTGGGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLNQAPT*PLWGEG
Trigger: GCCCTCACCCCACAAGGGGCAGGTGGGGGCTTGGTT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTCGAGGCCAAGCTGTaGGAGACCTGGCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKALEAKL*ETWHSF
Trigger: GAAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAGCTGTCATCGGAAATaGCGCTGGGAAAACCGGGTG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSCHRK*RWENRV
Trigger: CACCCGGTTTTCCCAGCGGCATTTCCGATGACAGCT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGCTTCTCACAAACTTTaGTTCCTGTGCGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKASHKL*FLCVSD
Trigger: GTCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGCTGTTCCCTCATCTaGGCGGCCCCAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGCSLI*AAPRQQ
Trigger: CTGCTGCCTTGGGGCCGCCCAGATGAGGGAACAGCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCTGTTCCCTCATCTaGGCGGCCCCAAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGCSLI*AAPRQQ
Trigger: CTGCTGCCTTGGGGCCGCCCAGATGAGGGAACAGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTGCTCTCCGGCTCCATaGGACACAAAGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWCSPAP*DTKMRA
Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCCGGAGAGCA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTGTCCGTGGCCAACATaGTCGTGGGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSCPWPT*SWANTS
Trigger: GCTGGTGTTCGCCCACGACCATGTTGGCCACGGACA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCCTTCGCTCTGTCCGTaGCCAACATGGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRPSLCP*PTWSWA
Trigger: CGCCCACGACCATGTTGGCCACGGACAGAGCGAAGG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPSERAR*SRWARG
Trigger: CCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR CCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGTCCTGGTGGGAAGTaGCCTCTCCTCTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGPGGK*PLLCGP
Trigger: GGGGCCACAGAGGAGAGGCCACTTCCCACCAGGACC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGTCCTGGTGGGAAGTaGCCTCTCCTCTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGPGGK*PLLCGP
Trigger: GGGGCCACAGAGGAGAGGCCACTTCCCACCAGGACC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGCAGTTCCCGCTGCTaGAGGAAGAAGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGSSRC*RKKGGS
Trigger: GCTCCCGCCCTTCTTCCTCCAGCAGCGGGAACTGCC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGCCTGGGAGAGCAGTaGCAGTTCCCGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGLGEQ*QFPLLE
Trigger: CTCCAGCAGCGGGAACTGCCACTGCTCTCCCAGGCC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRCDQGC*REGGGA
Trigger: TGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKARSWLS*CDQGCW
Trigger: CCAGCAGCCCTGATCACACCATGAGAGCCAGGAACG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCCACCTGCCCCTTGTaGGGTGAGGGCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPTCPL*GEGLAP
Trigger: AGGAGCCAAGCCCTCACCCCACAAGGGGCAGGTGGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTGCTCTGTGGGGACTTaGGCCGGGTCAGCAACCAAG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSCSVGT*AGSATK
Trigger: CTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGCCAGGGAGACAAGCTaGAGCTACAGAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGARETS*SYRRCS
Trigger: AGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGGC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCTAAGCAGGCGGGGCTaGCTTTCTCAGTGCATATTT +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLSRRG*LSQCIF
Trigger: AAATATGCACTGAGAAAGCCAGCCCCGCCTGCTTAG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCGCAGGGTCCTGTGTTaGCTCCTGACCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLRRVLC*LLTQQG
Trigger: CCCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGACCGGCTCTGGAGTaGCCGTGCGTGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGPALE*PCVRCQ
Trigger: CTGACATCTCACGCACGGCCACTCCAGAGCCGGTCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTTGCGGCTGTCACTaGCTACAGGCGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGCGCH*LQAASF
Trigger: GAAAGATGCCGCCTGTAGCCAGTGACAGCCGCAACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGAGCCCAGCACCACCTaGAAGTGGAGGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPREPSTT*KWREAG
Trigger: CCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGGAGGTGGGATCCTGTaGGTTTTCAGAGCACCCACC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQGGGIL*VFRAPT
Trigger: GGTGGGTGCTCTGAAAACCCACAGGATCCCACCTCC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGAGGTGGGATCCTGTaGGTTTTCAGAGCACCCACC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGGGIL*VFRAPT
Trigger: GGTGGGTGCTCTGAAAACCCACAGGATCCCACCTCC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCAGGTGGGCCTGGAGGTaGGATCCTGTGGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKARWAWR*DPVGFQ
Trigger: CTGAAAACCCACAGGATCCCACCTCCAGGCCCACCT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGACCCAGGTGGGCCTaGAGGTGGGATCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGPRWA*RWDPVG
Trigger: ACCCACAGGATCCCACCTCCAGGCCCACCTGGGTCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGCTGGGAAAACCGGGTaGGCTTCGCCGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLAGKTG*ASPGVC
Trigger: GCAGACACCCGGCGAAGCCCACCCGGTTTTCCCAGC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCATCGGAAATGCCGCTaGGAAAACCGGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQHRKCR*ENRVGF
Trigger: GAAGCCCACCCGGTTTTCCCAGCGGCATTTCCGATG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCCTGCATCCCCCAGACCATGAGCCGGGCACCGGCCAATGCATTCAGGGTGGGGACAAGGATGGTGACCTaGAGGCCAGTAAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: ACIPQTMSRAPANAFRVGTRMVT*RPVKLS
Trigger: ACTGAGTTTTACTGGCCTCCAGGTCACCATCCTTGT...CCCCACCCTGAATGCATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648300.1
3UTR CAA 72 bp ACCCCTCACCTCTGCAAGGAACTGAGGCCTGTAGGGTaGCGGCTGTCACTGGCTACAGGCGGCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TPHLCKELRPVG*RLSLATGGIFL
Trigger: CAGAAAGATGCCGCCTGTAGCCAGTGACAGCCGCAACCCTACAGGCCTCAGTTCCTTGCAGAGGTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FRVGTQFLPWLSFERPTCTVRLH*PGEGGP
Trigger: AGGACCTCCCTCACCTGGTCAATGCAGACGGACAGT...ACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTC +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTADQGV*VINVDL
Trigger: GAGGTCGACATTTATAACTCAGACCCCCTGATCTGC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTCTTGGCTAACTCCATaGGCAGGTAGGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWSWLTP*AGRPLC
Trigger: GCAAAGGGGCCTACCTGCTCATGGAGTTAGCCAAGA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCATCCCCCAGACCATaGGCCGGGCACCGGCCAATG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRASPRP*AGHRPM
Trigger: CATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGTGGTATTGGCACCTaGGAAGGGCAGGCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGGIGT*EGQARP
Trigger: GGGCCTAGCCTGCCCTTCTCAGGTGCCAATACCACC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACAATTTGGGGAATGGTaGTGCCACCACATGCATCTG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSQFGEW*CHHMHL
Trigger: CAGATGCATGTGGTGGCATCACCATTCCCCAAATTG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTGGAGTGGCCGTGCGTaGGATGTCAGGCACGCTCAC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLWSGRA*DVRHAH
Trigger: GTGAGCGTGCCTGACATCTCACGCACGGCCACTCCA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCCAACAGCTGGCTTGTaGAGCCATCGTGATCCCAAC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQPTAGL*SHRDPN
Trigger: GTTGGGATCACGATGGCTTCACAAGCCAGCTGTTGG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCATACACGCAGGGATGTaGCTGAGCCACAGTGACATA +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTIHAGM*LSHSDI
Trigger: TATGTCACTGTGGCTCAGTCACATCCCTGCGTGTAT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGGGTTTCCAGTACCTaGAGAAGAGGTACTGTCCGT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSWVSST*RRGTVR
Trigger: ACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGCATGGAATCCACATaGTGCAACACATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCMEST*CNTSLT
Trigger: CGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGCAGGTAGGCCCCTTTaGTGTCACATAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHAGRPL*CHIGDR
Trigger: CCGATCGCCTATGTGACAGCAAAGGGGCCTACCTGC...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPCPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGACTTTGTGTGGCCTaGTCTATCACAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGLCVA*SITAPG
Trigger: CCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLALEWP*VRCQAR
Trigger: GCGTGCCTGACATCTCACGCACGGCCACTCCAGAGC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAACAGGGTGCGGCGTCTaGGCCGCCACTTTATCCCTG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVITGCGV*AATLSL
Trigger: CAGGGATAAAGTGGCGGCGCAGACGCCGCACCCTGT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCACAACCACGACAGCCTaGAGAATCAGAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFTTTTA*RIRTRQ
Trigger: TTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TCTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPGGLQPLLTSVSLPGVSGGTFL*HAGRVF
Trigger: GAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCC...GGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTAGCACGCTGGAGTCGATaGGCCCGAGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLARWSR*ARGTSL
Trigger: CAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGC...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGTAFSS*MPKHTF
Trigger: GAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LQVDSSRCSRQSLCLAFPTAFSS*MPKHTF
Trigger: GAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGT...CGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGTTGAGAGTCTTGTCCTaGCTCTTGGCTAACTCCATG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKLRVLS*LLANSM
Trigger: CATGGAGTTAGCCAAGAGCCAGGACAAGACTCTCAA...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCCCAATGCATTCAGGGTaGGGACGCAGTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FSATLMGISRWTPAVAHVPMHSG*GRSSCR
Trigger: ACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGG...GACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCCCCTCTGCAAAGCCTaGTCTCAGGCTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWPLCKA*SQANKE
Trigger: CTCCTTGTTAGCCTGAGACCAGGCTTTGCAGAGGGG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCTCCATGGTCCCTGGTaGGCAGGAAGAGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLHGPW*AGRALG
Trigger: GCCCAGTGCTCTTCCTGCCCACCAGGGACCATGGAG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGTGCCACTGCTCCATaGTCCCTGGTGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGATAP*SLVGRK
Trigger: CTTCCTGCCCACCAGGGACCATGGAGCAGTGGCACC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTGTGATCAGGGCTGCTaGAGGGAGGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLCDQGC*REGGGA
Trigger: TGCCCCTCCACCCTCCCTCCAGCAGCCCTGATCACA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSRSWLS*CDQGCW
Trigger: CCAGCAGCCCTGATCACACCATGAGAGCCAGGAACG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCACTAAGCAGGCGGGGCTaGCTTTCTCAGTGCATATTT +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSLSRRG*LSQCIF
Trigger: AAATATGCACTGAGAAAGCCAGCCCCGCCTGCTTAG...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGAGCAGGGGGACATGGTaGGCGGATGTACCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRSRGTW*ADVPAL
Trigger: AAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCAAGCTGTGCGAGACCTaGCATTCCTTCCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFKLCET*HSFQTS
Trigger: TGAGGTTTGGAAGGAATGCCAGGTCTCGCACAGCTT...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGTTGACGGTGGTGCTTaGGCCTTGTGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRVDGGA*ALCARP
Trigger: AGGCCTGGCACACAAGGCCCAAGCACCACCGTCAAC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHEPEAK*VPCRRS
Trigger: ACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTC...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGRRSW*LQEAPC
Trigger: ACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACAGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AFRVGTQFLPWLSFERPTGRRSW*LQEAPC
Trigger: ACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCC...TGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGTGGCTGCTCATTTTaGGGAAGGGCTGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGGCSF*GRAGHF
Trigger: AAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGAAAGGCAGCCTTTGTaGGTACAGGCGGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIERQPL*VQAALG
Trigger: CCCGAGTGCCGCCTGTACTCACAAAGGCTGCCTTTC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGAGAATTACAGATCTaGGCCCAGGGCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGELQI*AQGISG
Trigger: CCCAGAGATGCCCTGGGCTCAGATCTGTAATTCTCC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGGTCAGGCCGCATGCTaGTATTCAATTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGGQAAC*YSIWGM
Trigger: CATTCCCCAAATTGAATATCAGCATGCGGCCTGACC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGCCCCTGCGCTGGTGTaGCTCCAGAGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLAPALV*LQSSEC
Trigger: ACATTCTGAGCTCTGGAGTCACACCAGCGCAGGGGC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCCCCTGCGCTGGTGTaGCTCCAGAGCTCAGAATGT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIAPALV*LQSSEC
Trigger: ACATTCTGAGCTCTGGAGTCACACCAGCGCAGGGGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSWTGLC*RWCLGL
Trigger: AAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGTGACTGAGCCACAGTaGCATAGCAAACCCAACAGC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWVTEPQ*HSKPNS
Trigger: GCTGTTGGGTTTGCTATGTCACTGTGGCTCAGTCAC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAAACTTTCCTCTGGCATaGTGGAAGGGTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGNFPLA*WKGLQV
Trigger: GACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WTPAVAHVSLSAWRFRSHEVLSV*IDQVRE
Trigger: CTCCCTCACCTGGTCAATGCAGACGGACAGTACCTC...ATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGGGTTTCCAGTACCTaGAGAAGAGGTACTGTCCGT +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGWVSST*RRGTVR
Trigger: ACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGATGGAATCCACATGCTaGAACACATCCCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKMESTC*NTSLTK
Trigger: TTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCAT...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATGCATGGAATCCACATaGTGCAACACATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGCMEST*CNTSLT
Trigger: CGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCACACCTTCAGCCCTaGCCGGCAGATCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRAHLQP*PADQGV
Trigger: GACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWHSAVG*RSTPSA
Trigger: GGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATG...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQHSAVG*RSTPSA
Trigger: GGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCTCTGGGTCACCGAGTaGTCCATGCAGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLWVTE*SMQTWT
Trigger: TGTCCAGGTCTGCATGGAGCACTCGGTGACCCAGAG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFVNPTY*WEKVRP
Trigger: TGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCAC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGGACTTTGTGTGGCCTaGTCTATCACAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSGLCVA*SITAPG
Trigger: CCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGCAAATGCTACTGAAGTaGTGTGTGTGTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKQMLLK*CVCLCE
Trigger: CTCACAGAGACACACACAGCACTTCAGTAGCATTTG...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCCCCTCCCTGGCCTTTaGCTTCCTCTCACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLPLPGL*LPLTFS
Trigger: CGAGAAGGTGAGAGGAAGGCAAAGGCCAGGGAGGGG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGTCTACCCCTCACCTCTaGAAGGAACTGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQSTPHL*KELRPV
Trigger: TACAGGCCTCAGTTCCTTGCAGAGGTGAGGGGTAGA...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTCTACCCCTCACCTCTaGAAGGAACTGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWSTPHL*KELRPV
Trigger: TACAGGCCTCAGTTCCTTGCAGAGGTGAGGGGTAGA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCAGAGCACCCACCAGTaGTCCCTCGGTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRQSTHQ*SLGEPS
Trigger: GCTGGGCTCACCGAGGGAGCACTGGTGGGTGCTCTG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTTTCCTCTGGCATGCTaGAAGGGTCTTCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAFPLAC*KGLQVL
Trigger: CAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCGCCTCCCATGGAGTaGCCCAGAAGGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIAPPME*PRRKTG
Trigger: TCCTGTCTTCCTTCTGGGCCACTCCATGGGAGGCGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCGATGGCGCCTCCCATaGAGTGGCCCAGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLRWRLP*SGPEGR
Trigger: TCTTCCTTCTGGGCCACTCCATGGGAGGCGCCATCG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCGATGGCGCCTCCCATaGAGTGGCCCAGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPRWRLP*SGPEGR
Trigger: TCTTCCTTCTGGGCCACTCCATGGGAGGCGCCATCG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCACGCTGGAGTCGATaGGCCCGAGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIARWSR*ARGTSL
Trigger: CAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCACGCTGGAGTCGATaGGCCCGAGGGACAAGTTTG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPARWSR*ARGTSL
Trigger: CAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACTGCTCCATGGTCCCTaGTGGGCAGGAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVILLHGP*WAGRAL
Trigger: CAGTGCTCTTCCTGCCCACCAGGGACCATGGAGCAG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCTCCAGTCCCTGCTCTaGGTCACCGAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLQSLL*VTECSM
Trigger: CATGGAGCACTCGGTGACCCAGAGCAGGGACTGGAG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAAGGGCAGGGCTGGGGTaGTATTGGCACCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIRAGLG*YWHLRR
Trigger: CCTTCTCAGGTGCCAATACCACCCCAGCCCTGCCCT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTGCTCTGTGGGGACTTaGGCCGGGTCAGCAACCAAG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPCSVGT*AGSATK
Trigger: CTTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAAGCAGGGGGACATGGTaGGCGGATGTACCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISRGTW*ADVPAL
Trigger: AAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGTTGACGGTGGTGCTTaGGCCTTGTGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPVDGGA*ALCARP
Trigger: AGGCCTGGCACACAAGGCCCAAGCACCACCGTCAAC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGACATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGHFCMD*AVLTVV
Trigger: CACCACCGTCAACACAGCCCAGTCCATACAGAAATG...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAGCACCACCTGGAAGTaGAGGGAAGCTGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSTTWK*REAGSL
Trigger: CAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAGCACCACCTGGAAGTaGAGGGAAGCTGGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSTTWK*REAGSL
Trigger: CAGCGACCCAGCTTCCCTCCACTTCCAGGTGGTGCT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCTGGGAAAACCGGGTaGGCTTCGCCGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRAGKTG*ASPGVC
Trigger: GCAGACACCCGGCGAAGCCCACCCGGTTTTCCCAGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVITVRLH*PGEGGP
Trigger: AGGACCTCCCTCACCTGGTCAATGCAGACGGACAGT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWAVAVL*ETHMFI
Trigger: AATAAACATGTGGGTCTCTCAAAGGACAGCCACGGC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTCCCGAGGCGGGTGGTaGACCCCACTTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRSRGGW*TPLIAG
Trigger: CCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGAATGCAAATGCTACTaGAGTGCTGTGTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFECKCY*SAVCVS
Trigger: AGAGACACACACAGCACTTCAGTAGCATTTGCATTC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAATGGAATCCACATGCTaGAACACATCCCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: QGQGPALEWPCVRCQARSMESTC*NTSLTK
Trigger: TTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCAT...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCATGGAATCCACATGCTaGAACACATCCCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: REAGSLLEGREADSLPLTMESTC*NTSLTK
Trigger: TTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCAT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERHSAVG*RSTPSA
Trigger: GGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATG...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGCAGGTAGGCCCCTTTaGTGTCACATAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSAGRPL*CHIGDR
Trigger: CCGATCGCCTATGTGACAGCAAAGGGGCCTACCTGC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCAGGTAGGCCCCTTTaGTGTCACATAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIAGRPL*CHIGDR
Trigger: CCGATCGCCTATGTGACAGCAAAGGGGCCTACCTGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCAGGTAGGCCCCTTTaGTGTCACATAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPAGRPL*CHIGDR
Trigger: CCGATCGCCTATGTGACAGCAAAGGGGCCTACCTGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPWGRSS*RGCPLR
Trigger: TCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp TCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCTGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SEFLAGTSRLQCDANGHLWGRSS*RGCPLR
Trigger: TCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCA...GAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCTGAGAAGCCATCTCTaGCCTTCCCCTGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLRSHL*PSPACI
Trigger: GATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTCACCGAGTGCTCCATaGAGACCTGGACAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSPSAP*RPGQEG
Trigger: GCCTTCCTGTCCAGGTCTGCATGGAGCACTCGGTGA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGTGCCTCCAGTCCCTaGTCTGGGTCACCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGASSP*SGSPSA
Trigger: AGCACTCGGTGACCCAGAGCAGGGACTGGAGGCACC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCTCTGGAGTGGCCGTaGGTGAGATGTCAGGCACGC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRALEWP*VRCQAR
Trigger: GCGTGCCTGACATCTCACGCACGGCCACTCCAGAGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATTACAGCCTCCTCCACCAGGCCCCTACTTaGCTGTGTGTCCACCTAGAT +
Preference number: 4 (lower is better)
Translates to: VAHVSLSAWRFRSHYSLLHQAPT*LCVHLD
Trigger: ATCTAGGTGGACACACAGGCAAGTAGGGGCCTGGTG...GAGGAGGCTGTAATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATGCTCTCCGGCTCCATaGGACACAAAGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVICSPAP*DTKMRA
Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCCGGAGAGCA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCTTCGCTCTGTCCGTaGCCAACATGGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPSLCP*PTWSWA
Trigger: CGCCCACGACCATGTTGGCCACGGACAGAGCGAAGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGATCCCTGACGAAAACGTaGAAGTCAGACACTACCATC +
Preference number: 4 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGSLTKT*KSDTTI
Trigger: GATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGA...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGTTGAGAGTCTTGTCCTaGCTCTTGGCTAACTCCATG +
Preference number: 4 (lower is better)
Translates to: LQVDSSRCSRQSLCLAFPLRVLS*LLANSM
Trigger: CATGGAGTTAGCCAAGAGCCAGGACAAGACTCTCAA...CGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLTQFLP*LSFERP
Trigger: GGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPTQFLP*LSFERP
Trigger: GGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCAATGCATTCAGGGTaGGGACGCAGTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPMHSG*GRSSCR
Trigger: ACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCCAATGCATTCAGGGTaGGGACGCAGTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPPMHSG*GRSSCR
Trigger: ACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGAGCCCACAAAGTCATaGGTGGCTGCTCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQEPTKS*VAAHFE
Trigger: CTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCCCCTCTGCAAAGCCTaGTCTCAGGCTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRPLCKA*SQANKE
Trigger: CTCCTTGTTAGCCTGAGACCAGGCTTTGCAGAGGGG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGGCAGGAAGAGCACTaGGCCTTGCCCATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGQEEH*ALPIGK
Trigger: CTTTCCTATGGGCAAGGCCCAGTGCTCTTCCTGCCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTCATGTTGGGGGTCCTaGTGGGAAGTGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSSCWGS*WEVASP
Trigger: AGGAGAGGCCACTTCCCACCAGGACCCCCAACATGA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCGTTCCTGGCTCTCATaGTGTGATCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPRSWLS*CDQGCW
Trigger: CCAGCAGCCCTGATCACACCATGAGAGCCAGGAACG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGAGGGTGACCCGTTCCTaGCTCTCATGGTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRRVTRS*LSWCDQ
Trigger: CTGATCACACCATGAGAGCCAGGAACGGGTCACCCT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLYHSS*ENYRSE
Trigger: CTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCAAGCTGTGCGAGACCTaGCATTCCTTCCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAKLCET*HSFQTS
Trigger: TGAGGTTTGGAAGGAATGCCAGGTCTCGCACAGCTT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGTTGCGGCTGTCACTaGCTACAGGCGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGCGCH*LQAASF
Trigger: GAAAGATGCCGCCTGTAGCCAGTGACAGCCGCAACC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGTTGCGGCTGTCACTaGCTACAGGCGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGCGCH*LQAASF
Trigger: GAAAGATGCCGCCTGTAGCCAGTGACAGCCGCAACC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGACACACACGCACACATaGGTAGCGGGAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRTHTHT*VAGAHA
Trigger: GGCGTGGGCTCCCGCTACCCATGTGTGCGTGTGTGT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCTGCACCGGGGAAGGTaGGGACTAGAAAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLHRGR*GLERWS
Trigger: ACTCCATCTTTCTAGTCCCCACCTTCCCCGGTGCAG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGGCCTCTCTGCGGCCGTaGGGATGGCGATGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKASLRP*GWRWRL
Trigger: GAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGC...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPEPEAK*VPCRRS
Trigger: ACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTCGCAGCAAGGACCTTaGAAGTTGTTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKASQQGP*KLLQIQ
Trigger: CTGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp GCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATCGCAGCAAGGACCTTaGAAGTTGTTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: AFRVGTQFLPWLSFERPTSQQGP*KLLQIQ
Trigger: CTGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGA...TGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLAAQG*ALSQQG
Trigger: TCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTCTTGGCTAACTCCATaGGCAGGTAGGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSWLTP*AGRPLC
Trigger: GCAAAGGGGCCTACCTGCTCATGGAGTTAGCCAAGA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTCTTGGCTAACTCCATaGGCAGGTAGGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPSWLTP*AGRPLC
Trigger: GCAAAGGGGCCTACCTGCTCATGGAGTTAGCCAAGA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCCTCAGCTCTGAATaGTTGGCTGATGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGLSSE*LADASL
Trigger: AAGGCTGGCATCAGCCAATCATTCAGAGCTGAGGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCACGGTGGCAAAGCCCTaGCCAGGGTCATATTTGCAC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSTVAKP*PGSYLH
Trigger: GTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCAGTGCTCCCTCGGTaGGCCCAGCACCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPVLPR*AQHHLE
Trigger: TTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGAAAGAAGAAGAGAGTaGGATGGGACCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIERRRE*DGTQVG
Trigger: GCCCACCTGGGTCCCATCTCACTCTCTTCTTCTTTC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGAAAGAAGAAGAGAGTaGGATGGGACCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPERRRE*DGTQVG
Trigger: GCCCACCTGGGTCCCATCTCACTCTCTTCTTCTTTC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCTTGTGAAGCCATCGTaGTCCCAACAAGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQLVKPS*SQQGLC
Trigger: ACATAGACCTTGTTGGGATCACGATGGCTTCACAAG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCATACACGCAGGGATGTaGCTGAGCCACAGTGACATA +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSIHAGM*LSHSDI
Trigger: TATGTCACTGTGGCTCAGTCACATCCCTGCGTGTAT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWADQGV*VINVDL
Trigger: AAGGTCGACATTTATAACTCAGACCCCCTGATCTGC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453507.6
CDS-3UTR TCA 90 bp TGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATCTTCATTCTCTGAGATaGGGGCCCAGGAGTGCAATT +
Preference number: 4 (lower is better)
Translates to: WTPAVAHVSLSAWRFRSHLHSLR*GPRSAI
Trigger: AATTGCACTCCTGGGCCCTCATCTCAGAGAATGAAG...ATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAACTTTCCTCTGGCATaGTGGAAGGGTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSNFPLA*WKGLQV
Trigger: GACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSEVLSV*IDQVRE
Trigger: CTCCCTCACCTGGTCAATGCAGACGGACAGTACCTC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIEVLSV*IDQVRE
Trigger: CTCCCTCACCTGGTCAATGCAGACGGACAGTACCTC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATTGCATGGAATCCACATaGTGCAACACATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHCMEST*CNTSLT
Trigger: CGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCA...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGCGCCTCCAGTTATTaGAGTCTGGTGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGASSY*SLVSWE
Trigger: TTCCCAGGACACCAGACTGCAATAACTGGAGGCGCC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGACTTTGTGTGGCCTaGTCTATCACAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGLCVA*SITAPG
Trigger: CCCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATCGCAGACGCACAAATaGGGGTGCCCAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISQTHK*GCPRQS
Trigger: ACTTTGCCTTGGGCACCCGCATTTGTGCGTCTGCGA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTCGCAGACGCACAAATaGGGGTGCCCAAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSQTHK*GCPRQS
Trigger: ACTTTGCCTTGGGCACCCGCATTTGTGCGTCTGCGA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTTTCCTCTGGCATGCTaGAAGGGTCTTCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRFPLAC*KGLQVL
Trigger: CAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGGTFL*HAGRVF
Trigger: GAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCCTTGGGTGTGCCTGTaGGTTTCCAGTACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLPWVCL*VSSTCR
Trigger: TCTGCAGGTACTGGAAACCCACAGGCACACCCAAGG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTGGCCAACATGGTCGTaGGCGAACACCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRWPTWS*ANTSRS
Trigger: GGACCTGCTGGTGTTCGCCCACGACCATGTTGGCCA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTGTCCGTGGCCAACATaGTCGTGGGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRCPWPT*SWANTS
Trigger: GCTGGTGTTCGCCCACGACCATGTTGGCCACGGACA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPEGQV*QHKVEH
Trigger: GTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPPEGQV*QHKVEH
Trigger: GTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRTAFSS*MPKHTF
Trigger: GAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCAGGGCTTCAACGGTaGCAAAGCCCTGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRAGLQR*QSPDQG
Trigger: ACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCGTAGGGACTTTGTGTaGCCTGCTCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRRRDFV*PALSQL
Trigger: GAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSHFCMD*AVLTVV
Trigger: CACCACCGTCAACACAGCCCAGTCCATACAGAAATG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAAGAAGAGAGTGAGATaGGACCCAGGTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPKKRVR*DPGGPG
Trigger: TCCAGGCCCACCTGGGTCCCATCTCACTCTCTTCTT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAAGAAGAGAGTGAGATaGGACCCAGGTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLKKRVR*DPGGPG
Trigger: TCCAGGCCCACCTGGGTCCCATCTCACTCTCTTCTT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCATGGGACACAAAGATaGGGGCCTTGGGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRHGTQR*GPWVCL
Trigger: CAGGCACACCCAAGGCCCTCATCTTTGTGTCCCATG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIAATHP*RKRGSQ
Trigger: CTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLAAQG*ALSQQG
Trigger: TCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR TCA 90 bp TCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SEFLAGTSRLQCDANGHLLAAQG*ALSQQG
Trigger: TCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAA...GAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCACCTTCATAAATCTTaGGAGTCTTGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQHLHKS*ESCPGS
Trigger: AGAGCCAGGACAAGACTCTCAAGATTTATGAAGGTG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGRRSW*LQEAPC
Trigger: ACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATT +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRAVAVL*ETHMFI
Trigger: AATAAACATGTGGGTCTCTCAAAGGACAGCCACGGC...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATTACAGCCTCCTCGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATT +
Preference number: 4 (lower is better)
Translates to: VAHVSLSAWRFRSHYSLLAVAVL*ETHMFI
Trigger: AATAAACATGTGGGTCTCTCAAAGGACAGCCACGGC...GAGGAGGCTGTAATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCAATTTGGGGAATGGTaGTGCCACCACATGCATCTG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRQFGEW*CHHMHL
Trigger: CAGATGCATGTGGTGGCATCACCATTCCCCAAATTG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGAATGCAAATGCTACTaGAGTGCTGTGTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAECKCY*SAVCVS
Trigger: AGAGACACACACAGCACTTCAGTAGCATTTGCATTC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGTGACTGAGCCACAGTaGCATAGCAAACCCAACAGC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIVTEPQ*HSKPNS
Trigger: GCTGTTGGGTTTGCTATGTCACTGTGGCTCAGTCAC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGATACACGCAGGGATGTaGCTGAGCCACAGTGACATA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRIHAGM*LSHSDI
Trigger: TATGTCACTGTGGCTCAGTCACATCCCTGCGTGTAT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTAGAAAGATGGAGTTaGTGGGGACAAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKALERWS*WGQVGL
Trigger: CAAACCAACTTGTCCCCATCAACTCCATCTTTCTAG...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAAACGTCAAAGAGCAGTaGGTGCTGTTACGTGTATGG +
Preference number: 4 (lower is better)
Translates to: QGPPDFSATLMGISRWTPNVKEQ*VLLRVW
Trigger: CCATACACGTAACAGCACTCACTGCTCTTTGACGTT...TGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp GCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATCTGCCCCTACAAGTTaGTATGGTTTGGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: AFRVGTQFLPWLSFERPTSAPTS*YGLDLC
Trigger: ACACAGATCCAAACCATATCAACTTGTAGGGGCAGA...TGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKVARPL*GREDGD
Trigger: ATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCAC...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPHSAVG*RSTPSA
Trigger: GGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR GCA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLPGTGQ*IQGGDA
Trigger: TGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGG...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCTACATTGCACCTTCTaGAGGGCTTCAACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLHCTF*RASTVA
Trigger: TGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCAAATGCTACTGAAGTaGTGTGTGTGTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQQMLLK*CVCLCE
Trigger: CTCACAGAGACACACACAGCACTTCAGTAGCATTTG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTCTACCCCTCACCTCTaGAAGGAACTGAGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSSTPHL*KELRPV
Trigger: TACAGGCCTCAGTTCCTTGCAGAGGTGAGGGGTAGA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCCTGGTGGGAGGTGAATaGATCATGGGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: FSATLMGISRWTPAVAHVLVGGE*IMGMDF
Trigger: GAAATCCATTCCCATGATGCATTCACCTCCCACCAG...GACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp GCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACAAAGGTGACGTCTTTCTaGCCCTACAAGTTGATATGG +
Preference number: 4 (lower is better)
Translates to: AFRVGTQFLPWLSFERPTKVTSF*PYKLIW
Trigger: CCATATCAACTTGTAGGGGCAGAAAGACGTCACCTT...TGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGGTCCCCAGCAGGTTTaGCTTTTATCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHGPQQV*LLSLPF
Trigger: GAAAGGAAGAGATAAAAGGCAAACCTGCTGGGGACC...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGGTAGTCTTTCTGCATaGAATCCACATGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQGSLSA*NPHAAT
Trigger: TGTTGCAGCATGTGGATTCCATGCAGAAAGACTACC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTTGCAGATTCAGGATTaGCAAGAACCAGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKALQIQD*QEPEAK
Trigger: TTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVITAFSS*MPKHTF
Trigger: GAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPTAFSS*MPKHTF
Trigger: GAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCACATGTTTATTTCATaGAAGACGGAGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFHMFIS*KTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAACACCAGGAATTCCTaGAACCCTTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPNTRNS*NPCGSW
Trigger: CCAGCTCCCACAAGGGTTCCAGGAATTCCTGGTGTT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTGCAGTCTGGTGTCCTaGGAACACCAGGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSCSLVS*EHQEFL
Trigger: CAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTGCAGTCTGGTGTCCTaGGAACACCAGGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLCSLVS*EHQEFL
Trigger: CAGGAATTCCTGGTGTTCCCAGGACACCAGACTGCA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCACGTGAGTCTGCCCTaGGGAGCTGGCCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGHVSLP*GAGPYG
Trigger: TCCATAGGGGCCAGCTCCCCAGGGCAGACTCACGTG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTCGTAGGGACTTTGTGTaGCCTGCTCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLRRDFV*PALSQL
Trigger: GAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACG...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCGTAGGGACTTTGTGTaGCCTGCTCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSRRDFV*PALSQL
Trigger: GAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGAGCCCAGCACCACCTaGAAGTGGAGGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGEPSTT*KWREAG
Trigger: CCCAGCTTCCCTCCACTTCCAGGTGGTGCTGGGCTC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 72 bp ACAAGGAGCCCACAAAGTCATGGGTGGCTGCTCATTTaGAGGAAGGGCTGGGCATTTTCTGAGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TRSPQSHGWLLI*RKGWAFSEPQR
Trigger: CCTCTGAGGCTCAGAAAATGCCCAGCCCTTCCTCAAAATGAGCAGCCACCCATGACTTTGTGGGCTCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 72 bp AAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTaGGGGAATGGTGATGCCACCACATGCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSPWSGRMLIFN*GNGDATTCIWG
Trigger: CCCCCAGATGCATGTGGTGGCATCACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265052.9
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
3UTR CAA 72 bp TCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTATTTCATGGAAGACGGA +
Preference number: 4 (lower is better)
Translates to: SGWGRSSCRGCP*RDPHVYFMEDG
Trigger: TCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDREPEAK*VPCRRS
Trigger: ACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPADQGV*VINVDL
Trigger: GAGGTCGACATTTATAACTCAGACCCCCTGATCTGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR TCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCACCTTCATAAATCTTaGGAGTCTTGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSHLHKS*ESCPGS
Trigger: AGAGCCAGGACAAGACTCTCAAGATTTATGAAGGTG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPAVAVL*ETHMFI
Trigger: AATAAACATGTGGGTCTCTCAAAGGACAGCCACGGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTTGGCAAGCCATATCTaGGAAGCCATCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLASHI*EAISAL
Trigger: AAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGGTCAGGCCGCATGCTaGTATTCAATTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLGQAAC*YSIWGM
Trigger: CATTCCCCAAATTGAATATCAGCATGCGGCCTGACC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTGGACTGGGCTGTGTTaGCGGTGGTGCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGWTGLC*RWCLGL
Trigger: AAGGCCCAAGCACCACCGTCAACACAGCCCAGTCCA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCCAACAGCTGGCTTGTaGAGCCATCGTGATCCCAAC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRPTAGL*SHRDPN
Trigger: GTTGGGATCACGATGGCTTCACAAGCCAGCTGTTGG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTTCCTACAGCCTGCGATaGAAAGGTAAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TLMGISRWTPAVAHVSLSSYSLR*KGKGCN
Trigger: ATTGCAACCCTTACCTTTTCATCGCAGGCTGTAGGA...AGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCCTGTTTCCATTATGTaGTGGCGTTTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSPVSIM*WRLHST
Trigger: TGTGGAATGCAAACGCCAGCACATAATGGAAACAGG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAACTTTCCTCTGGCATaGTGGAAGGGTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPNFPLA*WKGLQV
Trigger: GACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDREVLSV*IDQVRE
Trigger: CTCCCTCACCTGGTCAATGCAGACGGACAGTACCTC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTGGGTTTCCAGTACCTaGAGAAGAGGTACTGTCCGT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSWVSST*RRGTVR
Trigger: ACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCTGGGTTTCCAGTACCTaGAGAAGAGGTACTGTCCGT +
Preference number: 4 (lower is better)
Translates to: SEFLAGTSRLQCDANGHLWVSST*RRGTVR
Trigger: ACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCA...GAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGGCACACCTTCAGCCCTaGCCGGCAGATCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKAHLQP*PADQGV
Trigger: GACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGTGCCCTTCCCCTGCCTaGATCCCCCAGACCATGAGC +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVECPSPA*IPQTMS
Trigger: GCTCATGGTCTGGGGGATGCAGGCAGGGGAAGGGCA...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSDQGHI*TKEPPE
Trigger: CTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGCTTCTCACAAACTTTaGTTCCTGTGCGTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPASHKL*FLCVSD
Trigger: GTCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTGGCGTTTCCGGTCTCATTGTGTAGGACGTGCCTaGTTTCCTTTCACATTTTGC +
Preference number: 4 (lower is better)
Translates to: WTPAVAHVSLSAWRFRSHCVGRA*FPFTFC
Trigger: GCAAAATGTGAAAGGAAAGCAGGCACGTCCTACACA...ATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTTGAGAGTCTTGTCCTaGCTCTTGGCTAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRLRVLS*LLANSM
Trigger: CATGGAGTTAGCCAAGAGCCAGGACAAGACTCTCAA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGACAGAGAAGAGCCTTaGTTTCCTGCTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPDREEP*FPAQFS
Trigger: GGAGAACTGAGCAGGAAACCAAGGCTCTTCTCTGTC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCTAAGCAGGCGGGGCTaGCTTTCTCAGTGCATATTT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLSRRG*LSQCIF
Trigger: AAATATGCACTGAGAAAGCCAGCCCCGCCTGCTTAG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGAGCCCAGGGCATCTCTaGGCTTTTGGAAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRSPGHL*AFGKGS
Trigger: GGAACCCTTTCCAAAAGCCCAGAGATGCCCTGGGCT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCTCTATCACAGCTCCTaGGAGAATTACAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSLYHSS*ENYRSE
Trigger: CTCAGATCTGTAATTCTCCCAGGAGCTGTGATAGAG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGTTGACGGTGGTGCTTaGGCCTTGTGTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGVDGGA*ALCARP
Trigger: AGGCCTGGCACACAAGGCCCAAGCACCACCGTCAAC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCCATTTCTGTATGGACTaGGCTGTGTTGACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLHFCMD*AVLTVV
Trigger: CACCACCGTCAACACAGCCCAGTCCATACAGAAATG...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGAAGAAGAGAGTGAGATaGGACCCAGGTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRKKRVR*DPGGPG
Trigger: TCCAGGCCCACCTGGGTCCCATCTCACTCTCTTCTT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGTCCTTTAGCTCTAAATaGATACATATGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQSFSSK*IHMCPA
Trigger: TGCGGGGCACATATGTATCCATTTAGAGCTAAAGGA...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGCGCCGCGGTAGACGCTaGGATAAGGTCCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVERRGRR*DKVPAP
Trigger: TGGAGCAGGGACCTTATCCCAGCGTCTACCGCGGCG...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTCGCAGCAAGGACCTTaGAAGTTGTTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPSQQGP*KLLQIQ
Trigger: CTGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGCCCTTCTGGATAACATaGCAGTCCCAATTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRPFWIT*QSQFQE
Trigger: TTCCTGAAATTGGGACTGTCATGTTATCCAGAAGGG...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGAAAGCTTTTCAGGCATaGAACCCATTTCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWKAFQA*NPFLYG
Trigger: TCCATACAGAAATGGGTTTCATGCCTGAAAAGCTTT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCTTGTGAAGCCATCGTaGTCCCAACAAGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLVKPS*SQQGLC
Trigger: ACATAGACCTTGTTGGGATCACGATGGCTTCACAAG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCCTCAAACTCCCCTTaGTCCCTCCCACCTATCCAC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPSNSP*SLPPIH
Trigger: GTGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGTGAACCCCACTTATTaGTGGGAAAAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPVNPTY*WEKVRP
Trigger: TGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCAC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGCTACATTGCACCTTCTaGAGGGCTTCAACGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRLHCTF*RASTVA
Trigger: TGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAG...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAAATGGATACATATGTaGCCCGCAGACAGTATACAC +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSKWIHM*PADSIH
Trigger: GTGTATACTGTCTGCGGGGCACATATGTATCCATTT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGTCGACGCTTCGCGCCTaGCTCAGTTTCTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: YFMEDGVGDFRKLLVENMSTLRA*LSFSVR
Trigger: CCTCACGGAGAAACTGAGGCAGGCGCGAAGCGTCGA...CATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTCCCTGACGAAAACGTaGAAGTCAGACACTACCATC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLSLTKT*KSDTTI
Trigger: GATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTCCCTGACGAAAACGTaGAAGTCAGACACTACCATC +
Preference number: 4 (lower is better)
Translates to: GFNGGKALTRVIFALRSLSLTKT*KSDTTI
Trigger: GATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp ACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGGTAGTCTTTCTGCATaGAATCCACATGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: TLMGISRWTPAVAHVSLSGSLSA*NPHAAT
Trigger: TGTTGCAGCATGTGGATTCCATGCAGAAAGACTACC...AGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGCGCCTCCCATGGAGTaGCCCAGAAGGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLAPPME*PRRKTG
Trigger: TCCTGTCTTCCTTCTGGGCCACTCCATGGGAGGCGC...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTATTGCAGATTCAGGATTaGCAAGAACCAGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLLQIQD*QEPEAK
Trigger: TTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTTGAGAGTCTTGTCCTaGCTCTTGGCTAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLRVLS*LLANSM
Trigger: CATGGAGTTAGCCAAGAGCCAGGACAAGACTCTCAA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTTGAGAGTCTTGTCCTaGCTCTTGGCTAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLRVLS*LLANSM
Trigger: CATGGAGTTAGCCAAGAGCCAGGACAAGACTCTCAA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGTQFLP*LSFERP
Trigger: GGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGT...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTCCTTTAGCTCTAAATaGATACATATGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSSFSSK*IHMCPA
Trigger: TGCGGGGCACATATGTATCCATTTAGAGCTAAAGGA...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp GGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGGTAGGCACCTTCATAGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GVGDFRKLLVENMVGTFIAATHP*RKRGSQ
Trigger: CTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGC...TATGAAGGTGCCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGEPEAK*VPCRRS
Trigger: ACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCACCTTCATAAATCTTaGGAGTCTTGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPHLHKS*ESCPGS
Trigger: AGAGCCAGGACAAGACTCTCAAGATTTATGAAGGTG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR TCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCCGTGGCTGTCCTTTaGGAGACCCACATGTTTATT +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRAVAVL*ETHMFI
Trigger: AATAAACATGTGGGTCTCTCAAAGGACAGCCACGGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCCTTCTGGATAACATaGCAGTCCCAATTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPFWIT*QSQFQE
Trigger: TTCCTGAAATTGGGACTGTCATGTTATCCAGAAGGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCCCTTCTGGATAACATaGCAGTCCCAATTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSPFWIT*QSQFQE
Trigger: TTCCTGAAATTGGGACTGTCATGTTATCCAGAAGGG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGAAAGAAGAAGAGAGTaGGATGGGACCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGERRRE*DGTQVG
Trigger: GCCCACCTGGGTCCCATCTCACTCTCTTCTTCTTTC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCCAACAGCTGGCTTGTaGAGCCATCGTGATCCCAAC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGPTAGL*SHRDPN
Trigger: GTTGGGATCACGATGGCTTCACAAGCCAGCTGTTGG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGTATAAATGTCGACCTTaGAAGTTGTTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWYKCRP*KLLQIQ
Trigger: CTGAATCTGCAACAACTTTCAAGGTCGACATTTATA...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453507.6
CDS-3UTR GCA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCTGTTTCCATTATGTaGTGGCGTTTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPVSIM*WRLHST
Trigger: TGTGGAATGCAAACGCCAGCACATAATGGAAACAGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTGCATGGAATCCACATaGTGCAACACATCCCTGACG +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRCMEST*CNTSLT
Trigger: CGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCCAGGTGGACTCCACAGGATTATTCTAGATaGAGTGATCTCCAAGACAAG +
Preference number: 4 (lower is better)
Translates to: QGPPDFSATLMGISRWTPQDYSR*SDLQDK
Trigger: CTTGTCTTGGAGATCACTGCATCTAGAATAATCCTG...TGGAGTCCACCTGGAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGACAACCACGACAGCCTaGAGAATCAGAACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRTTTTA*RIRTRQ
Trigger: TTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGTTTCCATTATGTGCTaGCGTTTGCATTCCACAACC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPVSIMC*RLHSTT
Trigger: GGTTGTGGAATGCAAACGCCAGCACATAATGGAAAC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGTTTCCATTATGTGCTaGCGTTTGCATTCCACAACC +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLVSIMC*RLHSTT
Trigger: GGTTGTGGAATGCAAACGCCAGCACATAATGGAAAC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTTGCTCTCCGGCTCCATaGGACACAAAGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLCSPAP*DTKMRA
Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCCGGAGAGCA...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGTAGTCTTTCTGCATaGAATCCACATGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGSLSA*NPHAAT
Trigger: TGTTGCAGCATGTGGATTCCATGCAGAAAGACTACC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGTAGTCTTTCTGCATaGAATCCACATGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGSLSA*NPHAAT
Trigger: TGTTGCAGCATGTGGATTCCATGCAGAAAGACTACC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTGCAGATTCAGGATTaGCAAGAACCAGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSLQIQD*QEPEAK
Trigger: TTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTTGCAGATTCAGGATTaGCAAGAACCAGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPLQIQD*QEPEAK
Trigger: TTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp TTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGACTTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FINLVQSSGFKIHPGLMTSERAR*SRWARG
Trigger: CCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGA...AGTCATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCCACATGTTTATTTCATaGAAGACGGAGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSHMFIS*KTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTG...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACACATGTTTATTTCATaGAAGACGGAGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERHMFIS*KTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTG...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGACGCAGTTCCTGCCGTaGCTGTCCTTTGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVETQFLP*LSFERP
Trigger: GGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGT...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTTTTCCTCTGGCATGCTaGAAGGGTCTTCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGFPLAC*KGLQVR
Trigger: CCGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAA...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS-3UTR CCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGGTGCTGTTACGTGTATaGGAGCCACCAGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVEVLLRV*EPPGSP
Trigger: CGGAGACCCTGGTGGCTCCCATACACGTAACAGCAC...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGTCTTGGCTAACTCCATaGGCAGGTAGGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVESWLTP*AGRPLC
Trigger: GCAAAGGGGCCTACCTGCTCATGGAGTTAGCCAAGA...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGAAGACGGAGTTGGTaGCTTCAGGAAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGRRSW*LQEAPC
Trigger: ACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTCCTCGAATAGTCCTTaGAAGTTGTTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPSSNSP*KLLQIQ
Trigger: CTGAATCTGCAACAACTTTCAAGGACTATTCGAGGA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496306.5
CDS-3UTR TCA 90 bp TTTAAAATCCATCCTGGGCTGATGACTCCGGAATTTACATCTCCAGCCAGACTTGGGCCTGGTGGGAGGTaGATGCATCATGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: FKIHPGLMTPEFTSPARLGPGGR*MHHGNG
Trigger: TCCATTCCCATGATGCATTCACCTCCCACCAGGCCC...AAGTCTGGCTGGAGATGTAAATTCCGGAGTCATCAGCCCAGGATGGATTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTACACCAAACCTCATTTTaGACTGTAATCCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLHQTSF*TVIPNV
Trigger: AACATTGGGGATTACAGTTCAAAATGAGGTTTGGTG...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp GGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGGTAGGCACCTTCATAAACTTTCCTCTGGCATaGTGGAAGGGTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVGDFRKLLVENMVGTFINFPLA*WKGLQV
Trigger: GACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTT...TATGAAGGTGCCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGHSAVG*RSTPSA
Trigger: GGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTAGAGCCTTGGTTTCCTaGTCAGTTCTCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGRALVS*SVLLLG
Trigger: GCCCAGAAGGAGAACTGAGCAGGAAACCAAGGCTCT...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCAAATGGATACATATGTaGCCCGCAGACAGTATACAC +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSKWIHM*PADSIH
Trigger: GTGTATACTGTCTGCGGGGCACATATGTATCCATTT...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAAATGGATACATATGTaGCCCGCAGACAGTATACAC +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPKWIHM*PADSIH
Trigger: GTGTATACTGTCTGCGGGGCACATATGTATCCATTT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGCCTTGGGTGTGCCTGTaGGTTTCCAGTACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HMFISWKTELVTSGSSLWPWVCL*VSSTCR
Trigger: TCTGCAGGTACTGGAAACCCACAGGCACACCCAAGG...CCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: YFMEDGVGDFRKLLVENMPEGQV*QHKVEH
Trigger: GTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGG...CATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTC +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGADQGV*VINVDL
Trigger: GAGGTCGACATTTATAACTCAGACCCCCTGATCTGC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTAAAGCTTTTCAGGCATaGAACCCATTTCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLKAFQA*NPFLYG
Trigger: TCCATACAGAAATGGGTTTCATGCCTGAAAAGCTTT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACCTTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGTTGTTCCTCAGGTCCTaGGGTCCCCAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TFINLVQSSGFKIHPGLMLFLRS*GPQQVC
Trigger: GCAAACCTGCTGGGGACCTCAGGACCTGAGGAACAA...CATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGACCAGGGTCATATTTaGACTAAGGAGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGDQGHI*TKEPPE
Trigger: CTCAGGAGGCTCCTTAGTGCAAATATGACCCTGGTC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTATTTCATGGAATCTGCTCCTACAGCCTaGGATGAAAAGGTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RSSCRGCPLRDPHVYFMESAPTA*DEKVRV
Trigger: AACCCTTACCTTTTCATCGCAGGCTGTAGGAGCAGA...TTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGACTTGTCCGTGGCCAACATaGTCGTGGGCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: FINLVQSSGFKIHPGLMTCPWPT*SWANTS
Trigger: GCTGGTGTTCGCCCACGACCATGTTGGCCACGGACA...AGTCATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCCACATGTTTATTTCATaGAAGACGGAGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: CQHGAVSIEKELNARLHSHMFIS*KTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTG...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCACATGTTTATTTCATaGAAGACGGAGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPHMFIS*KTELVT
Trigger: AGTCACCAACTCCGTCTTCCATGAAATAAACATGTG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CCA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTTTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTAAGCTGTGCGAGACCTaGCATTCCTTCCAAACCTCA +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGKLCET*HSFQTS
Trigger: TGAGGTTTGGAAGGAATGCCAGGTCTCGCACAGCTT...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGGTTGAAGGTGGGGCCTaGTGGGAGGTGAATGCATCA +
Preference number: 4 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKVEGGA*WEVNAS
Trigger: TGATGCATTCACCTCCCACCAGGCCCCACCTTCAAC...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGALHP*DGIQQL
Trigger: CAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCCGGGCACCGGCCAATaGATTCAGGGTGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSPGTGQ*IQGGDA
Trigger: TGCGTCCCCACCCTGAATGCATTGGCCGGTGCCCGG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGATCTCCAAGACAAGTaGTGGTTGTCAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLDLQDK*WLSGSA
Trigger: AGCAGAGCCTGACAACCAGCACTTGTCTTGGAGATC...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSSERAR*SRWARG
Trigger: CCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR TCA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTCTAGAAAGATGGAGTTaGTGGGGACAAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGLERWS*WGQVGL
Trigger: CAAACCAACTTGTCCCCATCAACTCCATCTTTCTAG...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGCCTTCAGAGATGCTCTaGGGTTTGAGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVEPSEML*GLRRVE
Trigger: TTCTACTCTCCTCAAACCTCAGAGCATCTCTGAAGG...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCCTGGCCTGCTGCTGTaGTGGGCCTCTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSPGLLL*WASLLL
Trigger: CAGGAGAAGAGAGGCCCAGCACAGCAGCAGGCCAGG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAAGCAGAAGCCACTATaGTTCCTGTATAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HMFISWKTELVTSGSSLWKQKPL*FLYSLQ
Trigger: CTGCAGGCTATACAGGAAGCATAGTGGCTTCTGCTT...CCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGTCCCTGACGAAAACGTaGAAGTCAGACACTACCATC +
Preference number: 4 (lower is better)
Translates to: HMFISWKTELVTSGSSLWSLTKT*KSDTTI
Trigger: GATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGA...CCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGTTAGCACATTCTTTGTaGAAAATCACCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: RQYREGTQRKASQLSKDRLAHSL*KITWDL
Trigger: AAGGTCCCAGGTGATTTTCCACAAAGAATGTGCTAA...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAGGGGCCCGGGAAACTaGGAAACTAGCTCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSRGPGN*ETSSAH
Trigger: GTGCGCGGAGCTAGTTTCCCAGTTTCCCGGGCCCCT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp GGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGGTAGGCACCTTCATATGGATTTCTCATGAATaGTTTAGTGCCATCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GVGDFRKLLVENMVGTFIWISHE*FSAIPL
Trigger: AAGGGGGATGGCACTAAACCATTCATGAGAAATCCA...TATGAAGGTGCCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp TTTAAAATCCATCCTGGGCTGATGACTCCGGAATTTACATCTCCAGCCAGACTTTTTCCTCTGGCATGCTaGAAGGGTCTTCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FKIHPGLMTPEFTSPARLFPLAC*KGLQVL
Trigger: AAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAA...AAGTCTGGCTGGAGATGTAAATTCCGGAGTCATCAGCCCAGGATGGATTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCTGGCTCTCATGGTGTaGTCAGGGCTGCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLALMV*SGLLEG
Trigger: TCCCTCCAGCAGCCCTGATCACACCATGAGAGCCAG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp TATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGAACATGACATTTTGCCATGATTaGAAGTTTCCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YFMEDGVGDFRKLLVENMTFCHD*KFPEAS
Trigger: GGAGGCCTCAGGAAACTTTCAATCATGGCAAAATGT...CATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp CACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGATGGAATCCACATGCTaGAACACATCCCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: HMFISWKTELVTSGSSLWMESTC*NTSLTK
Trigger: TTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCAT...CCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGTGATGCCACCACATaGATCTGGGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGDATT*IWGRQQ
Trigger: CTGCTGCCTCCCCCAGATGCATGTGGTGGCATCACC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGCGGGGAGCGGCGCTaGGATTCTCCACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGGERR*DSPLLV
Trigger: AACTAGTAGTGGAGAATCGCAGCGCCGCTCCCCGCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp TTTAAAATCCATCCTGGGCTGATGACTCCGGAATTTACATCTCCAGCCAGACTTTCAAAGAGCAGTGAGTaGTGTTACGTGTATGGGAGC +
Preference number: 4 (lower is better)
Translates to: FKIHPGLMTPEFTSPARLSKSSE*CYVYGS
Trigger: GCTCCCATACACGTAACAGCACTCACTGCTCTTTGA...AAGTCTGGCTGGAGATGTAAATTCCGGAGTCATCAGCCCAGGATGGATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTACAGAAGGTGCTCTGTaGGGACTTGGGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSTEGAL*GLGPGQ
Trigger: CTGACCCGGCCCAAGTCCCCACAGAGCACCTTCTGT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSTVRLH*PGEGGP
Trigger: AGGACCTCCCTCACCTGGTCAATGCAGACGGACAGT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp CGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTATTTCATGGAATTCTTTATAGCAGCATaGGAATGGGCTAAAACACAA +
Preference number: 4 (lower is better)
Translates to: RSSCRGCPLRDPHVYFMEFFIAA*EWAKTQ
Trigger: TTGTGTTTTAGCCCATTCTCATGCTGCTATAAAGAA...TTCCATGAAATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTGGGGACGCAGTTCCTaGCGTGGCTGTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSWGRSS*RGCPLR
Trigger: TCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR GCA 90 bp CACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGGCTTCCTGTATAGCCTaGAGAATCATGAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: HMFISWKTELVTSGSSLWASCIA*RIMSQL
Trigger: TAATTGGCTCATGATTCTGCAGGCTATACAGGAAGC...CCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTGCTCTCCGGCTCCATaGGACACAAAGATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSCSPAP*DTKMRA
Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCCGGAGAGCA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGGAGCTGGCCCCTATaGAGACAGCAACCACCTCAT +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGSWPL*RQQPPH
Trigger: ATGAGGTGGTTGCTGTCTCCATAGGGGCCAGCTCCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAGGTGGGCCTGGAGGTaGGATCCTGTGGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSRWAWR*DPVGFQ
Trigger: CTGAAAACCCACAGGATCCCACCTCCAGGCCCACCT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTCTTGGCTAACTCCATaGGCAGGTAGGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSSWLTP*AGRPLC
Trigger: GCAAAGGGGCCTACCTGCTCATGGAGTTAGCCAAGA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGGTFL*HAGRVF
Trigger: GAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGCCAGGGAGACAAGCTaGAGCTACAGAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSARETS*SYRRCS
Trigger: AGAGCACCTTCTGTAGCTCCAGCTTGTCTCCCTGGC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGGAGAGTAGAACATACTaGAAATACCCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKESRTY*KYPTES
Trigger: GGATTCTGTGGGGTATTTCCAGTATGTTCTACTCTC...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CCA 90 bp CATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTGGAGGAGGTGAATGCATCATaGGAATGGATTTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: HVYFMEDGVGDFRKLLVEEVNAS*EWISHE
Trigger: TTCATGAGAAATCCATTCCCATGATGCATTCACCTC...CTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSAATHP*RKRGSQ
Trigger: CTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTCCAGTTATTGCAGTCTaGTGTCCTGGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSPVIAV*CPGNTR
Trigger: CCTGGTGTTCCCAGGACACCAGACTGCAATAACTGG...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp ACCTTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGAGAACTGTGGAAAGATaGAAACTACTCTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TFINLVQSSGFKIHPGLMRTVER*KLLFLL
Trigger: CAACAGAAAGAGTAGTTTTCATCTTTCCACAGTTCT...CATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR GCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTTATGTGCTGGCGTTTaGATTCCACAACCACGACAG +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLCAGV*IPQPRQ
Trigger: CTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTTGCAGATTCAGGATTaGCAAGAACCAGAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSLQIQD*QEPEAK
Trigger: TTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTCCTTTAGCTCTAAATaGATACATATGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSSFSSK*IHMCPA
Trigger: TGCGGGGCACATATGTATCCATTTAGAGCTAAAGGA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR TCA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTAAAGCTTTTCAGGCATaGAACCCATTTCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSKAFQA*NPFLYG
Trigger: TCCATACAGAAATGGGTTTCATGCCTGAAAAGCTTT...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp GACGAGCTGCGCGCGACCGGCTTCGCGGCGACAGGGTGCGGCGTCTaGGCCGCCACTTTATCCCTGGGCCGGCTCGGCGGCGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: DELRATGFAATGCGV*AATLSLGRLGGGGG
Trigger: GCCGCCCCCGCCGCCGAGCCGGCCCAGGGATAAAGTGGCGGCGCAGACGCCGCACCCTGTCGCCGCGAAGCCGGTCGCGCGCAGCTCGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS GCA 90 bp CAGGGCCGGGACGAGCTGCGCGCGACCGGCTTCGCGGCGACAGGGTaGGGCGTCTGCGCCGCCACTTTATCCCTGGGCCGGCTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: QGRDELRATGFAATG*GVCAATLSLGRLGG
Trigger: GCCGCCGAGCCGGCCCAGGGATAAAGTGGCGGCGCAGACGCCGCACCCTGTCGCCGCGAAGCCGGTCGCGCGCAGCTCGTCCCGGCCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS GCA 90 bp AGCGCAGCGGATCCTCGTTTGCGGCGGGCCAGGGCCGGGACGAGCTaGGCGCGACCGGCTTCGCGGCGACAGGGTGCGGCGTCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: SAADPRLRRARAGTS*ARPASRRQGAASAP
Trigger: CGGCGCAGACGCCGCACCCTGTCGCCGCGAAGCCGGTCGCGCGCAGCTCGTCCCGGCCCTGGCCCGCCGCAAACGAGGATCCGCTGCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS CCA 90 bp GCAGCTCCGAGCCCTCTTCCCGCACCCAGACCCTGCCTTTCGGGCTaGGGCGCTCAGCCGGGAGCCTGCTTCCAGCTCCCACCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AAPSPLPAPRPCLSG*GAQPGACFQLPPAG
Trigger: GCCTGCCGGTGGGAGCTGGAAGCAGGCTCCCGGCTGAGCGCCCCAGCCCGAAAGGCAGGGTCTGGGTGCGGGAAGAGGGCTCGGAGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp CTCCGCCTGCCTGCAGGGCCACGCGCGCACTCGACGCTTCGCGCCTaGCTCAGTTTCTCCGTGAGGCCGCACAGCCCCAGTCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LRLPAGPRAHSTLRA*LSFSVRPHSPSLGR
Trigger: CCTCCCGAGACTGGGGCTGTGCGGCCTCACGGAGAAACTGAGGCAGGCGCGAAGCGTCGAGTGCGCGCGTGGCCCTGCAGGCAGGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 90 bp GGCCACGCGCGCACTCGACGCTTCGCGCCTGCCTCAGTTTCTCCGTaGGGCCGCACAGCCCCAGTCTCGGGAGGCGTGACACACCCTCCC +
Preference number: 5 (lower is better)
Translates to: GHARTRRFAPASVSP*GRTAPVSGGVTHPP
Trigger: GGGAGGGTGTGTCACGCCTCCCGAGACTGGGGCTGTGCGGCCTCACGGAGAAACTGAGGCAGGCGCGAAGCGTCGAGTGCGCGCGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 90 bp GGCAGCAGGAAGGCAGCTCCGAGCCCTCTTCCCGCACCCAGACCCTaGCTTTCGGGCTGGGGCGCTCAGCCGGGAGCCTGCTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GSRKAAPSPLPAPRP*LSGWGAQPGACFQL
Trigger: GAGCTGGAAGCAGGCTCCCGGCTGAGCGCCCCAGCCCGAAAGGCAGGGTCTGGGTGCGGGAAGAGGGCTCGGAGCTGCCTTCCTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp CGCGCGCACACGCGCGCACACTCGGACACGCGCGCACACACACCGTaGACACACACACACGCACACATGGGTAGCGGGAGCCCACGCCGG +
Preference number: 5 (lower is better)
Translates to: RAHTRAHSDTRAHTP*THTHAHMGSGSPRR
Trigger: CCGGCGTGGGCTCCCGCTACCCATGTGTGCGTGTGTGTGTGTGCACGGTGTGTGTGCGCGCGTGTCCGAGTGTGCGCGCGTGTGCGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS CCA 90 bp CGGACACGCGCGCACACACACCGTGCACACACACACACGCACACATaGGTAGCGGGAGCCCACGCCGGGCGTGTCCGGGACCCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RTRAHTHRAHTHTHT*VAGAHAGRVRDPSA
Trigger: AGCACTGGGGTCCCGGACACGCCCGGCGTGGGCTCCCGCTACCCATGTGTGCGTGTGTGTGTGTGCACGGTGTGTGTGCGCGCGTGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR CAA 90 bp GCCTGCATCCCCCAGACCATGAGCCGGGCACCGGCCAATGCATTCAGGGTGGGGAAGGGCACAGTCAGCTaGGGGAGGGCGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: ACIPQTMSRAPANAFRVGKGTVS*GRARST
Trigger: GGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCTT...CCCCACCCTGAATGCATTGGCCGGTGCCCGGCTCATGGTCTGGGGGATGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 90 bp CAGAGGCGAAATGAGTACCATGCCGGCGAAGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGATGGCGCCTCCCATGGAGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QRRNEYHAGEVARPL*GREDGDGASHGVAQ
Trigger: CTGGGCCACTCCATGGGAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGTACTCATTTCGCCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS GCA 90 bp GCAGTGAGTGCTGTTACGTGTATGGGAGCCACCAGGGTCTCCGCCTaGCTGCAGGGCCACGCGCGCACTCGACGCTTCGCGCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: AVSAVTCMGATRVSA*LQGHARTRRFAPAS
Trigger: TGAGGCAGGCGCGAAGCGTCGAGTGCGCGCGTGGCCCTGCAGGCAGGCGGAGACCCTGGTGGCTCCCATACACGTAACAGCACTCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 90 bp TGGGGAGGGCGCGCTCCACCCGTGAGACGGCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCCCTGCCCGGCAGATCAGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: WGGRAPPVRRHSAVG*RSTPSALPGRSGGL
Trigger: CAGACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCCCTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000476682.1
ENST00000484451.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 90 bp AGCTTGGGGAGGGCGCGCTCCACCCGTGAGACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTCAGCCCTGCCCGGCAGATCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SLGRARSTRETAFSS*MPKHTFSPARQIRG
Trigger: CCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCCCTCCCCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000476682.1
ENST00000484451.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 90 bp GGGACTAGAAAGATGGAGTTGATGGGGACAAGTTGGTTTGGGGGCTaGTGCGAAGGAGCAGGGAGGGCGCGCGCGCGCGCACACGCGCGC +
Preference number: 5 (lower is better)
Translates to: GTRKMELMGTSWFGG*CEGAGRARARAHAR
Trigger: GCGCGCGTGTGCGCGCGCGCGCGCCCTCCCTGCTCCTTCGCACCAGCCCCCAAACCAACTTGTCCCCATCAACTCCATCTTTCTAGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS CCA 90 bp GGATTGGCAAGAACCAGAGGCGAAATGAGTACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCCGTGAGGATGGCGATGGCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GLARTRGEMSTMPAK*PGLSAAVRMAMAPP
Trigger: GGGAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTCTTGCCAATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000496306.5
ENST00000648300.1
CDS-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGGTGGTGCTTGGGCCTaGTGTGCCAGGCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QGQGPALEWPCVRCQARSGGAWA*CARPLW
Trigger: CCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp GCTCTGTGTAACGGGATGGTGTGCAAGTGCCAGCCTTGCAGGCGCTaGTCCCAGGTCAACCCACCTGCCTGCTGGGGCCCACACAGCCTT +
Preference number: 5 (lower is better)
Translates to: ALCNGMVCKCQPCRR*SQVNPPACWGPHSL
Trigger: AAGGCTGTGTGGGCCCCAGCAGGCAGGTGGGTTGACCTGGGAGCAGCGCCTGCAAGGCTGGCACTTGCACACCATCCCGTTACACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp CCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCATGCTGGAAGGGTCTTCAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: PGEGGPGRECSAGSA*GNFPLACWKGLQVR
Trigger: CCGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000479967.5
CDS-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCAAGGGCACAGTCAGCTaGGGGAGGGCGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAKGTVS*GRARST
Trigger: GGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCTT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGCAGCGGATCCTCGTTaGCGGCGGGCCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLAADPR*RRARAG
Trigger: CCCGGCCCTGGCCCGCCGCAAACGAGGATCCGCTGC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS CCA 90 bp CAGCCTGGAGAATCAGAACCAGGCAAATCGGGCTGTTCCCTCATCTaGGCGGCCCCAAGGCAGCAGGAAGGCAGCTCCGAGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QPGESEPGKSGCSLI*AAPRQQEGSSEPSS
Trigger: GGAAGAGGGCTCGGAGCTGCCTTCCTGCTGCCTTGGGGCCGCCCAGATGAGGGAACAGCCCGATTTGCCTGGTTCTGATTCTCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp CCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCATGCTGGAAGGGTCTTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PGEGGPGRECSAGSA*GNFPLACWKGLQVL
Trigger: CAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp AACAAATCGCTAGAGGGGCTCGGAGAAGGGAGGGGCCCGGGAAACTaGGAAACTAGCTCCGCGCACACCGAGGCACCTCGCAGACGCACA +
Preference number: 5 (lower is better)
Translates to: NKSLEGLGEGRGPGN*ETSSAHTEAPRRRT
Trigger: TGTGCGTCTGCGAGGTGCCTCGGTGTGCGCGGAGCTAGTTTCCCAGTTTCCCGGGCCCCTCCCTTCTCCGAGCCCCTCTAGCGATTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAA +
Preference number: 5 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGVLCGD*GRVSNQ
Trigger: TTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCAC...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGGGTGGTGCTTGGGCCTaGTGTGCCAGGCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWGGAWA*CARPLW
Trigger: CCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACC...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCTGAGGCCTGTAGGGTaGCGGCTGTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFLRPVG*RLSLAT
Trigger: TGTAGCCAGTGACAGCCGCAACCCTACAGGCCTCAG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp ACATGGGCTGGGATTTCCACATCGCTGAGCCTCCGTTTCCTCAGCTaGCAGTGGGACCTTGACCCTCCCCCAGAGGACCACGGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TWAGISTSLSLRFLS*QWDLDPPPEDHGEG
Trigger: ACCTTCCCCGTGGTCCTCTGGGGGAGGGTCAAGGTCCCACTGGCAGCTGAGGAAACGGAGGCTCAGCGATGTGGAAATCCCAGCCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp CCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCATGCTGGAAGGGTCTTCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PGEGGPGRECSAGSA*GNFPLACWKGLQVL
Trigger: AAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp GCACCCACCAGTGCTCCCTCGGTGAGCCCAGCACCACCTGGAAGTGGAGGGAAGGACGGCATTCAGCAGTaGGATGCCGAAGCACACCTT +
Preference number: 5 (lower is better)
Translates to: APTSAPSVSPAPPGSGGKDGIQQ*DAEAHL
Trigger: AAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTC...CTTCCCTCCACTTCCAGGTGGTGCTGGGCTCACCGAGGGAGCACTGGTGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 5 (lower is better)
Translates to: REAGSLLEGREADSLPLTSLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp AGGCAGCAGGGAGGCGTAGGGACTTTGTGTGGCCTGCTCTATCACAGCTCCTGGAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RQQGGVGTLCGLLYHSSWRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...CCAGGAGCTGTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCCCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCCCCAGAACCCCTACATaGCACCTTCTGCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFPRTPT*HLLQGF
Trigger: GAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGG...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGCAGCGGATCCTCGTTaGCGGCGGGCCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RQYREGTQRKASQLSKDRAADPR*RRARAG
Trigger: CCCGGCCCTGGCCCGCCGCAAACGAGGATCCGCTGC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS TCA 90 bp CTAGCTCTGCTGCCTCGTGAACATGGGCTGGGATTTCCACATCGCTaGGCCTCCGTTTCCTCAGCTGCCAGTGGGACCTTGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LALLPREHGLGFPHR*ASVSSAASGTLTLP
Trigger: GGGGAGGGTCAAGGTCCCACTGGCAGCTGAGGAAACGGAGGCTCAGCGATGTGGAAATCCCAGCCCATGTTCACGAGGCAGCAGAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp GCGGGTGCCCAAGGCAAAGTCGCCCCCAAGGCTTCTCACAAACTTTaGTTCCTGTGCGTCTCCGACAGCACAGGACACGTAGCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: AGAQGKVAPKASHKL*FLCVSDSTGHVAPK
Trigger: CTTCGGGGCTACGTGTCCTGTGCTGTCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGCCTTGGGGGCGACTTTGCCTTGGGCACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp AGCCCCCTGCCTCTGAGGATACCGAAGCTTACTGCCCTCCAGCCTTaGCATCCAGGCAAGCAGATCTCATTCTGCAGCCGCCACTGTGCC +
Preference number: 5 (lower is better)
Translates to: SPLPLRIPKLTALQP*HPGKQISFCSRHCA
Trigger: GGCACAGTGGCGGCTGCAGAATGAGATCTGCTTGCCTGGATGCCAAGGCTGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGCAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp CCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCATGCTGGAAGGGTCTTCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: PGEGGPGRECSAGSA*GNFPLACWKGLQVI
Trigger: AATGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494830.1
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCAAGGGCACAGTCAGCTaGGGGAGGGCGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPKGTVS*GRARST
Trigger: GGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCTT...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CAA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCAAGGGCACAGTCAGCTaGGGGAGGGCGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GFNGGKALTRVIFALRSLKGTVS*GRARST
Trigger: GGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCCTT...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCAGTCTTGTCCTGGCTCTaGGCTAACTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QGQGPALEWPCVRCQARSVLSWL*ANSMSR
Trigger: CCTGCTCATGGAGTTAGCCAAGAGCCAGGACAAGAC...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCGTCTTGTCCTGGCTCTaGGCTAACTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFVLSWL*ANSMSR
Trigger: CCTGCTCATGGAGTTAGCCAAGAGCCAGGACAAGAC...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGAAGAGCACTGGGCCTaGCCCATAGGAAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAEEHWA*PIGKAQ
Trigger: CTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAGGGCTGGGGTGGTATaGGCACCTGAGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSRAGVV*APEKGR
Trigger: CCTGCCCTTCTCAGGTGCCAATACCACCCCAGCCCT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGCTGAGGCCTGTAGGGTaGCGGCTGTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQLRPVG*RLSLAT
Trigger: TGTAGCCAGTGACAGCCGCAACCCTACAGGCCTCAG...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp CGCTGGAGTCGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGACCTAGCCGGGGAGGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: RWSRWARGTSLAAQG*ALSQQGPSRGGKTR
Trigger: CCTTGTTTTCCCTCCCCGGCTAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp ATTCCGAGAGAGCACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCACTTTCGCAGCAAGGACCTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: IPREHAGVDGPEGQV*QHKVEHFRSKDLAG
Trigger: CCCGGCTAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCATGGAAGACGGAGTaGGTGACTTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: REAGSLLEGREADSLPLTSWKTE*VTSGSS
Trigger: GGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGA...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTCATGGAAGACGGAGTaGGTGACTTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFSWKTE*VTSGSS
Trigger: GGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGAGGCGCCTCCAGTTATaGCAGTCTGGTGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQRRLQL*QSGVLG
Trigger: TCCCAGGACACCAGACTGCAATAACTGGAGGCGCCT...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCGGCCTAGACTTCATGTaGGGGGTCCTGGTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAGLDFM*GVLVGS
Trigger: ACTTCCCACCAGGACCCCCAACATGAAGTCTAGGCC...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAACGCAGGGTCCTGTGTaGGCTCCTGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVITQGPV*APDPAG
Trigger: CCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGT...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp CTGTGGGTTTCCAGTACCTGCAGAAGAGGTACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LWVSSTCRRGTVRLH*PGEGGPGRECSAGS
Trigger: GGACCCCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000479967.5
ENST00000494830.1
ENST00000648300.1
CDS TCA 90 bp ACCCAGAGCTCTAACCTTCCCGTGGGTCTTGGCACCAGCGGCCACTaGTGTTCTTTTGGGGGACAAGATTGCTGTGCTTGCCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: TQSSNLPVGLGTSGH*CSFGGQDCCACPPS
Trigger: GGAGGGTGGGCAAGCACAGCAATCTTGTCCCCCAAAAGAACATCAGTGGCCGCTGGTGCCAAGACCCACGGGAAGGTTAGAGCTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp CCGCACCCAGATGGATCACATTGTCGAGGTCGACCAGATGACTGCTaGTCCTGCTCTCCCACAACCTCCATCCTGAGCTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: PHPDGSHCRGRPDDC*SCSPTTSILSCEHT
Trigger: GGTGTGCTCACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGATCCATCTGGGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS GCA 90 bp GTCCCGCACCCAGATGGATCACATTGTCGAGGTCGACCAGATGACTaGTGCTCCTGCTCTCCCACAACCTCCATCCTGAGCTGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: VPHPDGSHCRGRPDD*CSCSPTTSILSCEH
Trigger: GTGCTCACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGATCCATCTGGGTGCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGACAAAGATGAGGGCCTaGGGTGTGCCTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQTKMRA*GVPVGF
Trigger: GAAACCCACAGGCACACCCAAGGCCCTCATCTTTGT...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGACGGCATTCAGCAGTaGGATGCCGAAGCACACCTT +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQDGIQQ*DAEAHL
Trigger: AAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CAAGGACAGGGACCGGCTCTGGAGTGGCCGTGCGTGAGATGTCAGGCACGCTCATGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTAT +
Preference number: 5 (lower is better)
Translates to: QGQGPALEWPCVRCQARSCRGCP*RDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCA...TGAGCGTGCCTGACATCTCACGCACGGCCACTCCAGAGCCGGTCCCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GTGTTGGCTCCTGACCCAGCAGGGGGACATGGTGGGCGGATGTACCAGCCCTTCTGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTAT +
Preference number: 5 (lower is better)
Translates to: VLAPDPAGGHGGRMYQPFCRGCP*RDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCA...GAAGGGCTGGTACATCCGCCCACCATGTCCCCCTGCTGGGTCAGGAGCCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCAGGCGCCTCCAGTTATaGCAGTCTGGTGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSRRLQL*QSGVLG
Trigger: TCCCAGGACACCAGACTGCAATAACTGGAGGCGCCT...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGATGCCAGCCTTGGCCTaGGGTGAGGCCTGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: RQYREGTQRKASQLSKDRMPALA*GEACPG
Trigger: GCCGGGACAGGCCTCACCCAAGGCCAAGGCTGGCAT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGTGCTCTGTGGGGACTaGGGCCGGGTCAGCAACCAA +
Preference number: 5 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLVLCGD*GRVSNQ
Trigger: TTGGTTGCTGACCCGGCCCAAGTCCCCACAGAGCAC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS GCA 90 bp TGTGCCTGTGGGTTTCCAGTACCTGCAGAAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: CACGFPVPAEEVLSV*IDQVREVLVGNALR
Trigger: CCGCAGAGCATTCCCTACCAGGACCTCCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTCTGCAGGTACTGGAAACCCACAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000479967.5
ENST00000494830.1
ENST00000648300.1
CDS GCA 90 bp TCAGAGCCAAGAAAAGGCCCAGGGACCCAGCACCTCAGCAGTGCCTaGCACAGAGGTGAAAGCAAGAGACCACCCAGCATCCACACCATT +
Preference number: 5 (lower is better)
Translates to: SEPRKGPGTQHLSSA*HRGESKRPPSIHTI
Trigger: AATGGTGTGGATGCTGGGTGGTCTCTTGCTTTCACCTCTGTGGCAGGCACTGCTGAGGTGCTGGGTCCCTGGGCCTTTTCTTGGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp GCAGGGCAGTGCGGAAGGGCCCACAGGAGCCACACAGAGAAAGTGTaGGTCCATTTCTCTCGGGTGGAAGTAGAAATAGCACCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: AGQCGRAHRSHTEKV*VHFSRVEVEIAPAR
Trigger: TCGAGCTGGTGCTATTTCTACTTCCACCCGAGAGAAATGGACGCACACTTTCTCTGTGTGGCTCCTGTGGGCCCTTCCGCACTGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp ACATCAGCCAGGTTCGTCTCCCAAGCCTGCGTCCTTAAGCCTGCATaGCCAAGGACTCTCCCTTCTGACTCAGCCTCTATTCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TSARFVSQACVLKPA*PRTLPSDSASIQPG
Trigger: GCCAGGCTGAATAGAGGCTGAGTCAGAAGGGAGAGTCCTTGGGCATGCAGGCTTAAGGACGCAGGCTTGGGAGACGAACCTGGCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp CTGGTAGGGAATGCTCTGCGGGGTCCGCCTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTCAGGTCCTGTTTCCATTATGTGCTG +
Preference number: 5 (lower is better)
Translates to: LVGNALRGPPGGTFL*HAGRVFRSCFHYVL
Trigger: CAGCACATAATGGAAACAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp TGCATAAAGGCAGTGGGCTGTGGCTCTGTGGCCTTCACTAGACTCTaGCTGTGTAAGGACGAGTGTTCCAGGGCCTTAGCGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CIKAVGCGSVAFTRL*LCKDECSRALALSS
Trigger: GGAGGAGAGCGCTAAGGCCCTGGAACACTCGTCCTTACACAGCCAGAGTCTAGTGAAGGCCACAGAGCCACAGCCCACTGCCTTTATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp TTCTCAGTGTACATCAAGGGCACAGGGCACGTAGCTCAGTACCCTTaGCAGAGGGCAAGGGCACTCACAGGCACCGAGGAACCACCTTCT +
Preference number: 5 (lower is better)
Translates to: FSVYIKGTGHVAQYP*QRARALTGTEEPPS
Trigger: AGAAGGTGGTTCCTCGGTGCCTGTGAGTGCCCTTGCCCTCTGCCAAGGGTACTGAGCTACGTGCCCTGTGCCCTTGATGTACACTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp CTGGTAGGGAATGCTCTGCGGGGTCCGCCTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTCAGGTCATTTCTTGCAAACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LVGNALRGPPGGTFL*HAGRVFRSFLANLS
Trigger: GGAGAGGTTTGCAAGAAATGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494830.1
CDS-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCATTATGTGCTGGCGTTaGCATTCCACAACCACGACA +
Preference number: 5 (lower is better)
Translates to: REAGSLLEGREADSLPLTIMCWR*HSTTTT
Trigger: TGTCGTGGTTGTGGAATGCAAACGCCAGCACATAAT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQFGSTR*STFAAR
Trigger: CCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAA...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CAA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGAGACGGCATTCAGCAGTaGGATGCCGAAGCACACCTT +
Preference number: 5 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERDGIQQ*DAEAHL
Trigger: AAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTC...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp CCTTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCGTCTTGTCCTGGCTCTaGGCTAACTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLPSSHLLEAKLCETWHSVLSWL*ANSMSR
Trigger: CCTGCTCATGGAGTTAGCCAAGAGCCAGGACAAGAC...GGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGAAGAGCACTGGGCCTaGCCCATAGGAAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIEEHWA*PIGKAQ
Trigger: CTGGGCCTTTCCTATGGGCAAGGCCCAGTGCTCTTC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGACGCAGGGTCCTGTGTaGGCTCCTGACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RQYREGTQRKASQLSKDRTQGPV*APDPAG
Trigger: CCCTGCTGGGTCAGGAGCCAACACAGGACCCTGCGT...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTGGGGACAAGTTGGTTaGGGGGCTGGTGCGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GFNGGKALTRVIFALRSLWGQVG*GAGAKE
Trigger: CTCCTTCGCACCAGCCCCCAAACCAACTTGTCCCCA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGGCTTCTCACAAACTTaGCTTCCTGTGCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQGFSQT*LPVRLR
Trigger: TCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGCC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp CTGCTCCAGGGAGCTTACGGTCTATTCACTAACGTCAAAGAGCAGTaGGTGCTGTTACGTGTATGGGAGCCACCAGGGTCTCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LLQGAYGLFTNVKEQ*VLLRVWEPPGSPPA
Trigger: GGCAGGCGGAGACCCTGGTGGCTCCCATACACGTAACAGCACTCACTGCTCTTTGACGTTAGTGAATAGACCGTAAGCTCCCTGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 90 bp CCAGATGGATCACATTGTCGAGGTCGACCAGATGACTGCTGCTCCTaGTCTCCCACAACCTCCATCCTGAGCTGTGAGCACACCAGGGAA +
Preference number: 5 (lower is better)
Translates to: PDGSHCRGRPDDCCS*SPTTSILSCEHTRE
Trigger: TTCCCTGGTGTGCTCACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGATCCATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS CCA 90 bp ATTCCGAGAGAGCACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCACTTTCGCAGCAAGGACCCAAAAAGG +
Preference number: 5 (lower is better)
Translates to: IPREHAGVDGPEGQV*QHKVEHFRSKDPKR
Trigger: CCTTTTTGGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496306.5
CDS-3UTR CAA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGACAAAGATGAGGGCCTaGGGTGTGCCTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRTKMRA*GVPVGF
Trigger: GAAACCCACAGGCACACCCAAGGCCCTCATCTTTGT...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 5 (lower is better)
Translates to: REAGSLLEGREADSLPLTGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTCCCTCAAACTCCCCTaGCTCCCTCCCACCTATCCA +
Preference number: 5 (lower is better)
Translates to: CQHGAVSIEKELNARLHSSLKLP*LPPTYP
Trigger: TGGATAGGTGGGAGGGAGCAAGGGGAGTTTGAGGGA...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCCCCAGAACCCCTACATaGCACCTTCTGCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPPRTPT*HLLQGF
Trigger: GAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGG...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATACCCAGAACCCCTACATaGCACCTTCTGCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIPRTPT*HLLQGF
Trigger: GAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGG...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCCTAGACTTCATGTaGGGGGTCCTGGTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGLDFM*GVLVGS
Trigger: ACTTCCCACCAGGACCCCCAACATGAAGTCTAGGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp AGGGAAGCTGGGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCATGCTGATATTCAATTaGGGGAATGGTGATGCCACC +
Preference number: 5 (lower is better)
Translates to: REAGSLLEGREADSLPLTMLIFN*GNGDAT
Trigger: GGTGGCATCACCATTCCCCAAATTGAATATCAGCAT...GGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACCCAGCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACAGCCTCCTCATTACTaGAGAGTCTTGTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERQPPHY*RVLSWL
Trigger: GAGCCAGGACAAGACTCTCAAGTAATGAGGAGGCTG...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 90 bp TCAACCCACCTGCCTGCTGGGGCCCACACAGCCTTCTCAGGGACATaGCTGTTTTATGTAAGCCAGCTTCCTACCCATTCCCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: STHLPAGAHTAFSGT*LFYVSQLPTHSLTR
Trigger: TCTGGTCAGGGAATGGGTAGGAAGCTGGCTTACATAAAACAGTCATGTCCCTGAGAAGGCTGTGTGGGCCCCAGCAGGCAGGTGGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 90 bp ACGGCGCCCGGCCAGTCTCCCTGTCTTTGCAAAAACCCTGGGAGATaGGGCTTCATCCTCACTGAACAGATGAGAAAATGGAGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: TAPGQSPCLCKNPGR*GFILTEQMRKWRLG
Trigger: ACCGAGCCTCCATTTTCTCATCTGTTCAGTGAGGATGAAGCCTCATCTCCCAGGGTTTTTGCAAAGACAGGGAGACTGGCCGGGCGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp TCCAGGGAGCTTACGGTCTATTCACTAACGTCAAAGAGCAGTGAGTaGTGTTACGTGTATGGGAGCCACCAGGGTCTCCGCCTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SRELTVYSLTSKSSE*CYVYGSHQGLRLPA
Trigger: TGCAGGCAGGCGGAGACCCTGGTGGCTCCCATACACGTAACAGCACTCACTGCTCTTTGACGTTAGTGAATAGACCGTAAGCTCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 90 bp ATTCCGAGAGAGCACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCACTTTCGCAGCAAGGACCTTGAAAGT +
Preference number: 5 (lower is better)
Translates to: IPREHAGVDGPEGQV*QHKVEHFRSKDLES
Trigger: ACTTTCAAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000487473.5
ENST00000648300.1
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGATTATGTGCTGGCGTTaGCATTCCACAACCACGACA +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQIMCWR*HSTTTT
Trigger: TGTCGTGGTTGTGGAATGCAAACGCCAGCACATAAT...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTCCCGAGGCGGGTGGTGAACCCCACTTATTGCTGGGAAAAAGTGAGGCCAAGGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: FPRRVVNPTYCWEKVRPRFGSTR*STFAAR
Trigger: CCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAA...CCTTGGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACCACCCGCCTCGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CAA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTATTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLFGSTR*STFAAR
Trigger: CCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAA...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGACGGCATTCAGCAGTaGGATGCCGAAGCACACCTT +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPDGIQQ*DAEAHL
Trigger: AAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGTCTTGTCCTGGCTCTaGGCTAACTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPVLSWL*ANSMSR
Trigger: CCTGCTCATGGAGTTAGCCAAGAGCCAGGACAAGAC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CAA 90 bp GCCAATGCATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGATGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTAT +
Preference number: 5 (lower is better)
Translates to: ANAFRVGTQFLPWLSFERCRGCP*RDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCA...TCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATGCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp GGTCGCTGCTGGAAGGGAGGGAGGCTGACTCTCTACCCCTCACCTCTGCAAGGAATGCTGATATTCAATTaGGGGAATGGTGATGCCACC +
Preference number: 5 (lower is better)
Translates to: GRCWKGGRLTLYPSPLQGMLIFN*GNGDAT
Trigger: GGTGGCATCACCATTCCCCAAATTGAATATCAGCAT...TCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCTCCCTCCCTTCCAGCAGCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGTGGTGCTTGGGCCTaGTGTGCCAGGCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGGAWA*CARPLW
Trigger: CCAGAGAGGCCTGGCACACAAGGCCCAAGCACCACC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTCAAGACAAGTGCTGGTaGTCAGGCTCTGCTCCTACA +
Preference number: 5 (lower is better)
Translates to: TLMGISRWTPAVAHVSLSQDKCW*SGSAPT
Trigger: TGTAGGAGCAGAGCCTGACAACCAGCACTTGTCTTG...AGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCTTCGCAGCAAGGACCTaGAAAGTTGTTGCAGATTCA +
Preference number: 5 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAFAART*KVVADS
Trigger: TGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGAA...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPFGSTR*STFAAR
Trigger: CCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000496306.5
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATCATGGAAGACGGAGTaGGTGACTTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVISWKTE*VTSGSS
Trigger: GGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGA...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTCATGGAAGACGGAGTaGGTGACTTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPSWKTE*VTSGSS
Trigger: GGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CAA 90 bp TCCGAATTTCTGGCAGGGACCTCCAGACTTCAGTGCGACGCTAATGGGCATCTCTCATGGAAGACGGAGTaGGTGACTTCAGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SEFLAGTSRLQCDANGHLSWKTE*VTSGSS
Trigger: GGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGA...GAGATGCCCATTAGCGTCGCACTGAAGTCTGGAGGTCCCTGCCAGAAATTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp GGGCAGGAAGGAGGCGCCTCCAGTTATTGCAGTCTGGTGTCCTGGGAACACCAGGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 5 (lower is better)
Translates to: GQEGGASSYCSLVSWEHQGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...CTGGTGTTCCCAGGACACCAGACTGCAATAACTGGAGGCGCCTCCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GGCCCCAGAACCCCTACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCATGCTGATATTCAATTaGGGGAATGGTGATGCCACC +
Preference number: 5 (lower is better)
Translates to: GPRTPTLHLLQGFNGGKAMLIFN*GNGDAT
Trigger: GGTGGCATCACCATTCCCCAAATTGAATATCAGCAT...GGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGTAGGGGTTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGTTGATGGGGACAAGTaGGTTTGGGGGCTGGTGCGA +
Preference number: 5 (lower is better)
Translates to: RQYREGTQRKASQLSKDRVDGDK*VWGLVR
Trigger: TCGCACCAGCCCCCAAACCAACTTGTCCCCATCAAC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS-3UTR CAA 90 bp TTTGCCTTCCTCTCACCTTCTCGAGGCCAAGCTGTGCGAGACCTGGCATTCCTTGGCTTCTCACAAACTTaGCTTCCTGTGCGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: FAFLSPSRGQAVRDLAFLGFSQT*LPVRLR
Trigger: TCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGCC...AAGGAATGCCAGGTCTCGCACAGCTTGGCCTCGAGAAGGTGAGAGGAAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp AGATTTCTCATTGTGCCACCATTTGTGTTTTGGGGACCCATCACCTaGTTCTGCAGGGACCTGGGCCTGGAGGTGCCAGTCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: RFLIVPPFVFWGPIT*FCRDLGLEVPVHLQ
Trigger: CTGAAGATGGACTGGCACCTCCAGGCCCAGGTCCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 90 bp TGCGTCCATTTCTCTCGGGTGGAAGTAGAAATAGCACCAGCTCGATaGGGAGGCTGTGTGGCAGAGGGAAGGATTGCTGGGTTTGATTCC +
Preference number: 5 (lower is better)
Translates to: CVHFSRVEVEIAPAR*GGCVAEGRIAGFDS
Trigger: GGAATCAAACCCAGCAATCCTTCCCTCTGCCACACAGCCTCCTCATCGAGCTGGTGCTATTTCTACTTCCACCCGAGAGAAATGGACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 90 bp GGCCCAGGAGTGCAATTGCTGAGCACCATGTTGTTCCTCAGGTCCTaGGGTCCCCAGCAGGTTTGCCTTTTATCTCTTCCTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: GPGVQLLSTMLFLRS*GPQQVCLLSLPFSI
Trigger: GATGCTGAAAGGAAGAGATAAAAGGCAAACCTGCTGGGGACCTCAGGACCTGAGGAACAACATGGTGCTCAGCAATTGCACTCCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 90 bp GTTTCCATTATGTGCTGGCGTTTGCATTCCACAACCACGACAGCCTaGAGAATCAGAACCAGGCAAATCGGGCTGTTCCCTCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: VSIMCWRLHSTTTTA*RIRTRQIGLFPHLG
Trigger: GCCCAGATGAGGGAACAGCCCGATTTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAATGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp TTCTGCATGGAATCCACATGCTGCAACACATCCCTGACGAAAACGTaGAAGTCAGACACTACCATCCTCTCCCCTTCGCTCTGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: FCMESTCCNTSLTKT*KSDTTILSPSLCPW
Trigger: CCACGGACAGAGCGAAGGGGAGAGGATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS-3UTR CAA 90 bp TTTTGGCAAGCCATATCTGAGAAGCCATCTCTGCCCTTCCCCTGCCTGCATCCCTGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTAT +
Preference number: 5 (lower is better)
Translates to: FWQAISEKPSLPFPCLHPCRGCP*RDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCA...GGGATGCAGGCAGGGGAAGGGCAGAGATGGCTTCTCAGATATGGCTTGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000496306.5
CDS-3UTR CAA 90 bp TGTCAGCACGGAGCCGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CQHGAVSIEKELNARLHSGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...GCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACGGCTCCGTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp ACATTGCACCTTCTGCAGGGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATAGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLHLLQGFNGGKALTRVIGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...TATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCCCTGCAGAAGGTGCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATTTCTGCCCCTACAAGTaGATATGGTTTGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHFCPYK*IWFGSV
Trigger: CACAGATCCAAACCATATCAACTTGTAGGGGCAGAA...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp AGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGTTTACATTACTTGAGAGTCTaGTCCTGGCTCTTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: RVGTQFLPWLSFERPTCLHYLRV*SWLLAN
Trigger: GTTAGCCAAGAGCCAGGACAAGACTCTCAAGTAATG...TAAACATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 90 bp CAGGGTAGTCTTTCTGCATGGAATCCACATGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAGACACTACCATCCTCTCCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: QGSLSAWNPHAATHP*RKRGSQTLPSSPLR
Trigger: GCGAAGGGGAGAGGATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCAGAAAGACTACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS GCA 90 bp GCATCCACACCATTTCGTCCAAGCCCACCACCAGATTTCTCATTGTaGCACCATTTGTGTTTTGGGGACCCATCACCTGATTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: ASTPFRPSPPPDFSL*HHLCFGDPSPDSAG
Trigger: CCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTGGGCTTGGACGAAATGGTGTGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp GTGGCCTTCAGAGATGCTCTGAGGTTTGAGGAGAGTAGAACATACTaGAAATACCCCACAGAATCCCCGGAAAGCCCAGGACTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VAFRDALRFEESRTY*KYPTESPESPGLQG
Trigger: GCCTTGAAGTCCTGGGCTTTCCGGGGATTCTGTGGGGTATTTCCAGTATGTTCTACTCTCCTCAAACCTCAGAGCATCTCTGAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp ACGCTAATGGGCATCTCCAGGTGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTTTCGCAGCAAGGACCTaGAAAGTTGTTGCAGATTCA +
Preference number: 5 (lower is better)
Translates to: TLMGISRWTPAVAHVSLSFAART*KVVADS
Trigger: TGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGAA...AGAGAGACTGACGTGAGCAACGGCTGGAGTCCACCTGGAGATGCCCATTAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp CGTCAGTATCGAGAAGGAACTCAACGCAAGGCTTCACAGCTTTCCAAGGACAGGGGTGAACCCCACTTATaGCTGGGAAAAAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RQYREGTQRKASQLSKDRGEPHL*LGKSEA
Trigger: GGCCTCACTTTTTCCCAGCAATAAGTGGGGTTCACC...CCTGTCCTTGGAAAGCTGTGAAGCCTTGCGTTGAGTTCCTTCTCGATACTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp TCCCTGTCTTTGCAAAAACCCTGGGAGATGAGGCTTCATCCTCACTaGACAGATGAGAAAATGGAGGCTCGGTACCATGAGGTCCATGGG +
Preference number: 5 (lower is better)
Translates to: SLSLQKPWEMRLHPH*TDEKMEARYHEVHG
Trigger: CCCATGGACCTCATGGTACCGAGCCTCCATTTTCTCATCTGTTCAGTGAGGATGAAGCCTCATCTCCCAGGGTTTTTGCAAAGACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 90 bp TGCTGGAAGGGTCTTCAGGTCCTGTTTCCATTATGTGCTGGCGTTTaGATTCCACAACCACGACAGCCTGGAGAATCAGAACCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: CWKGLQVLFPLCAGV*IPQPRQPGESEPGK
Trigger: TTTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAATGGAAACAGGACCTGAAGACCCTTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp GTGGCCGTGATGGGTCAGGAATGTTCAAGAGTCCAGCTAGTATCATaGGCCAGCTCCAAGAACGAGCCTGGGAAAGGAAAACTTGGAATT +
Preference number: 5 (lower is better)
Translates to: VAVMGQECSRVQLVS*ASSKNEPGKGKLGI
Trigger: AATTCCAAGTTTTCCTTTCCCAGGCTCGTTCTTGGAGCTGGCCCATGATACTAGCTGGACTCTTGAACATTCCTGACCCATCACGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp GCATCACTGGCAAGAGTTGCCTGGGATGAGCTCTGGCCATTTCTCTaGGGTACTGAAAATACACGGCAGGTGCAGAATCACACAGATCAA +
Preference number: 5 (lower is better)
Translates to: ASLARVAWDELWPFL*GTENTRQVQNHTDQ
Trigger: TTGATCTGTGTGATTCTGCACCTGCCGTGTATTTTCAGTACCCCAGAGAAATGGCCAGAGCTCATCCCAGGCAACTCTTGCCAGTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS-3UTR CAA 90 bp GGCTTCAACGGTGGCAAAGCCCTGACCAGGGTCATATTTGCACTAAGGAGCCTCTTCGCAGCAAGGACCTaGAAAGTTGTTGCAGATTCA +
Preference number: 5 (lower is better)
Translates to: GFNGGKALTRVIFALRSLFAART*KVVADS
Trigger: TGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGAA...GAGGCTCCTTAGTGCAAATATGACCCTGGTCAGGGCTTTGCCACCGTTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398104.5
ENST00000434178.6
CDS-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGACGGCATTCAGCAGTaGGATGCCGAAGCACACCTT +
Preference number: 5 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGDGIQQ*DAEAHL
Trigger: AAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS TCA 90 bp GGCTGTGTAGGACGTGCCTGCTTTCCTTTCACATTTTGCCATGATTaGAAGTTTCCTGAGGCCTCCCAGAAGCAGAAGCCACTATGCTTC +
Preference number: 5 (lower is better)
Translates to: GCVGRACFPFTFCHD*KFPEASQKQKPLCF
Trigger: GAAGCATAGTGGCTTCTGCTTCTGGGAGGCCTCAGGAAACTTTCAATCATGGCAAAATGTGAAAGGAAAGCAGGCACGTCCTACACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 90 bp TTGCCTGTGTGTCCACCTAGATCTCTAGGGCAGGATTATTCTAGATaGAGTGATCTCCAAGACAAGTGCTGGTTGTCAGGCTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LPVCPPRSLGQDYSR*SDLQDKCWLSGSAP
Trigger: AGGAGCAGAGCCTGACAACCAGCACTTGTCTTGGAGATCACTGCATCTAGAATAATCCTGCCCTAGAGATCTAGGTGGACACACAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 90 bp CTAGGGCAGGATTATTCTAGATGCAGTGATCTCCAAGACAAGTGCTaGTTGTCAGGCTCTGCTCCTACAGCCTGCGATGAAAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LGQDYSRCSDLQDKC*LSGSAPTACDEKVR
Trigger: CCTTACCTTTTCATCGCAGGCTGTAGGAGCAGAGCCTGACAACCAGCACTTGTCTTGGAGATCACTGCATCTAGAATAATCCTGCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTGTCTTGTCCTGGCTCTaGGCTAACTCCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLVLSWL*ANSMSR
Trigger: CCTGCTCATGGAGTTAGCCAAGAGCCAGGACAAGAC...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp CATTCAGGGTGGGGACGCAGTTCCTGCCGTGGCTGTCCTTTGAGAGACCCACATGCAGATGTAGAAGTCTaGTATCTGGCTTTTTATTTC +
Preference number: 5 (lower is better)
Translates to: HSGWGRSSCRGCPLRDPHADVEV*YLAFYF
Trigger: GAAATAAAAAGCCAGATACAAGACTTCTACATCTGC...ATGTGGGTCTCTCAAAGGACAGCCACGGCAGGAACTGCGTCCCCACCCTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 90 bp TGGGATTGGCTGATGGGATTTCTTTCCTGCATTTCCCTTGGCTACTaGGGAGCACGGCTGGAACTGCTAATTAGTCAGCATCTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: WDWLMGFLSCISLGY*GARLELLISQHLLS
Trigger: AGACAGAAGATGCTGACTAATTAGCAGTTCCAGCCGTGCTCCTCAGTAGCCAAGGGAAATGCAGGAAAGAAATCCCATCAGCCAATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493611.1
CDS GCA 90 bp TTGGTGCTCGCATCCTTCCAGGGGAAGATCCTTCTGAATCTAGTCTaGATCTCTCCCACTTACAAGGATTTTCTCCTGTTCAGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LVLASFQGKILLNLV*ISPTYKDFLLFSSA
Trigger: TGCAGAGCTGAACAGGAGAAAATCCTTGTAAGTGGGAGAGATGCAGACTAGATTCAGAAGGATCTTCCCCTGGAAGGATGCGAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CCA 90 bp TCTCCCACTTACAAGGATTTTCTCCTGTTCAGCTCTGCAAAGAGATaGGGCAGCTGGTCTGCACCTTCAGTTAGAATCCTGGCTCTCTTA +
Preference number: 5 (lower is better)
Translates to: SPTYKDFLLFSSAKR*GSWSAPSVRILALL
Trigger: TAAGAGAGCCAGGATTCTAACTGAAGGTGCAGACCAGCTGCCCCATCTCTTTGCAGAGCTGAACAGGAGAAAATCCTTGTAAGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CCA 90 bp TGCTGGAAGGGTCTTCAGGTCCTTTTCATTCAGCATAATTCCAGGTaGGTTGGGTGTAGCAGTCCACAGTATGGAAGTACCACAGTGTGT +
Preference number: 5 (lower is better)
Translates to: CWKGLQVLFIQHNSR*VGCSSPQYGSTTVC
Trigger: ACACACTGTGGTACTTCCATACTGTGGACTGCTACACCCAACCCACCTGGAATTATGCTGAATGAAAAGGACCTGAAGACCCTTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGCATCTCTGGGCTTTaGGAAAGGGTTCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGISGL*ERVPAF
Trigger: AAAAGCAGGAACCCTTTCCAAAAGCCCAGAGATGCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp TTTTCTCAAATGGTAGAAATCAGTAATTCCTTCTTAGTGCAAAGGTaGCAGCCCCCTGCCTCTGAGGATACCGAAGCTTACTGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FSQMVEISNSFLVQR*QPPASEDTEAYCPP
Trigger: TGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGCAGGGGGCTGCCACCTTTGCACTAAGAAGGAATTACTGATTTCTACCATTTGAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 90 bp TCTGCACAAGGACTGGGGTATTTTCAAACACGGATCAAATGTCTGTaGACTCCAAGAATTGGGAGCTCGTCTGCATTGGGATCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SAQGLGYFQTRIKCL*TPRIGSSSALGSVL
Trigger: AAGCACAGATCCCAATGCAGACGAGCTCCCAATTCTTGGAGTTCACAGACATTTGATCCGTGTTTGAAAATACCCCAGTCCTTGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp TCAAAAGTGAGCTGTGAAATGCTGAAATTAGAATTGGACGGAAGGTaGCAAGCAGTGAATTCTCAGTGTACATCAAGGGCACAGGGCACG +
Preference number: 5 (lower is better)
Translates to: SKVSCEMLKLELDGR*QAVNSQCTSRAQGT
Trigger: CGTGCCCTGTGCCCTTGATGTACACTGAGAATTCACTGCTTGCCACCTTCCGTCCAATTCTAATTTCAGCATTTCACAGCTCACTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 90 bp GCCTGGTGGGAGGTGAATGCATCATGGGAATGGATTTCTCATGAATaGTTTAGTGCCATCCCCCTTGGTATTGTCTTGGTAATAGTGAGT +
Preference number: 5 (lower is better)
Translates to: AWWEVNASWEWISHE*FSAIPLGIVLVIVS
Trigger: ACTCACTATTACCAAGACAATACCAAGGGGGATGGCACTAAACCATTCATGAGAAATCCATTCCCATGATGCATTCACCTCCCACCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp TTCATAAATCTTGTCCAGTCCAGTGGTTTTAAAATCCATCCTGGGCTGATGACTACAAAGATGAGGGCCTaGGGTGTGCCTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FINLVQSSGFKIHPGLMTTKMRA*GVPVGF
Trigger: GAAACCCACAGGCACACCCAAGGCCCTCATCTTTGT...AGTCATCAGCCCAGGATGGATTTTAAAACCACTGGACTGGACAAGATTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp CATCTAAAGAGTCCCTGGTCAGGCCGCATGCTGATATTCAATTTGGGGAATGGTGGCAGAGGCTTGGCTTaGTTTTCAGTGGACATTTTA +
Preference number: 5 (lower is better)
Translates to: HLKSPWSGRMLIFNLGNGGRGLA*FSVDIL
Trigger: TAAAATGTCCACTGAAAACAAAGCCAAGCCTCTGCC...ACCATTCCCCAAATTGAATATCAGCATGCGGCCTGACCAGGGACTCTTTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS-3UTR CAA 90 bp GACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGCTCCTTAGGTCCCCAGCAGGTTaGCCTTTTATCTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: DPHVYFMEDGVGDFRKLLRSPAG*PFISSF
Trigger: AAAGGAAGAGATAAAAGGCAAACCTGCTGGGGACCT...AAGGAGCTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS-3UTR CAA 90 bp TTGAGAGACCCACATGTTTATTTCATGGAAGACGGAGTTGGTGACTTCAGGAAGATAATTCCAGGTGGGTaGGGTGTAGCAGTCCACAGT +
Preference number: 5 (lower is better)
Translates to: LRDPHVYFMEDGVGDFRKIIPGG*GVAVHS
Trigger: ACTGTGGACTGCTACACCCAACCCACCTGGAATTAT...CTTCCTGAAGTCACCAACTCCGTCTTCCATGAAATAAACATGTGGGTCTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 90 bp CCTGGGAAAGGAAAACTTGGAATTCTGGGAACTCTGCACAAGGACTaGGGTATTTTCAAACACGGATCAAATGTCTGTGAACTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: PGKGKLGILGTLHKD*GIFKHGSNVCELQE
Trigger: TTCTTGGAGTTCACAGACATTTGATCCGTGTTTGAAAATACCCCAGTCCTTGTGCAGAGTTCCCAGAATTCCAAGTTTTCCTTTCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTGGAGGCGTAGGGACTTaGTGTGGCCTGCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSGGVGT*CGLLYH
Trigger: GTGATAGAGCAGGCCACACAAAGTCCCTACGCCTCC...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS CCA 90 bp TCTGTGAGATTACAGAAGTTCCCAAACAGTGCTAGTTCCATTGTTTaGAGCTCAGGGTCAGTCAAACCTAATAAAAGTACAGACACCTGG +
Preference number: 5 (lower is better)
Translates to: SVRLQKFPNSASSIV*SSGSVKPNKSTDTW
Trigger: CCAGGTGTCTGTACTTTTATTAGGTTTGACTGACCCTGAGCTCCAAACAATGGAACTAGCACTGTTTGGGAACTTCTGTAATCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS TCA 90 bp GCACAGACATTTGGGGATGAAAGATGCTATTTCAAAAGTGAGCTGTaGAATGCTGAAATTAGAATTGGACGGAAGGTGGCAAGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: AQTFGDERCYFKSEL*NAEIRIGRKVASSE
Trigger: TTCACTGCTTGCCACCTTCCGTCCAATTCTAATTTCAGCATTTCACAGCTCACTTTTGAAATAGCATCTTTCATCCCCAAATGTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS-3UTR CAA 90 bp AAAACATCGGATTTATTAGGATTAGCTGTAGTGTACACTGATTCCTTTAGCTCTTGCCGTGGCTGTCCTTaGAGAGACCCACATGTTTAT +
Preference number: 5 (lower is better)
Translates to: KTSDLLGLAVVYTDSFSSCRGCP*RDPHVY
Trigger: ATAAACATGTGGGTCTCTCAAAGGACAGCCACGGCA...AGAGCTAAAGGAATCAGTGTACACTACAGCTAATCCTAATAAATCCGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
CDS GCA 72 bp CGCGCGACCGGCTTCGCGGCGACAGGGTGCGGCGTCTaGGCCGCCACTTTATCCCTGGGCCGGCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RATGFAATGCGV*AATLSLGRLGG
Trigger: GCCGCCGAGCCGGCCCAGGGATAAAGTGGCGGCGCAGACGCCGCACCCTGTCGCCGCGAAGCCGGTCGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS GCA 72 bp GACGAGCTGCGCGCGACCGGCTTCGCGGCGACAGGGTaGGGCGTCTGCGCCGCCACTTTATCCCTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: DELRATGFAATG*GVCAATLSLGR
Trigger: CCGGCCCAGGGATAAAGTGGCGGCGCAGACGCCGCACCCTGTCGCCGCGAAGCCGGTCGCGCGCAGCTCGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398104.5
CDS TCA 72 bp CCATGCCGGCGAAGTGGCCCGGCCTCTCTGCGGCCGTaGGGATGGCGATGGCGCCTCCCATGGAGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PCRRSGPASLRP*GWRWRLPWSGP
Trigger: TGGGCCACTCCATGGGAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS GCA 72 bp AAGGCAGCTCCGAGCCCTCTTCCCGCACCCAGACCCTaGCTTTCGGGCTGGGGCGCTCAGCCGGGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: KAAPSPLPAPRP*LSGWGAQPGAC
Trigger: GCAGGCTCCCGGCTGAGCGCCCCAGCCCGAAAGGCAGGGTCTGGGTGCGGGAAGAGGGCTCGGAGCTGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS GCA 72 bp CCTGCAGGGCCACGCGCGCACTCGACGCTTCGCGCCTaGCTCAGTTTCTCCGTGAGGCCGCACAGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: PAGPRAHSTLRA*LSFSVRPHSPS
Trigger: ACTGGGGCTGTGCGGCCTCACGGAGAAACTGAGGCAGGCGCGAAGCGTCGAGTGCGCGCGTGGCCCTGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp TTACGTGTATGGGAGCCACCAGGGTCTCCGCCTGCCTaGAGGGCCACGCGCGCACTCGACGCTTCGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LRVWEPPGSPPA*RATRALDASRL
Trigger: CAGGCGCGAAGCGTCGAGTGCGCGCGTGGCCCTGCAGGCAGGCGGAGACCCTGGTGGCTCCCATACACGTAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp GCTGTTACGTGTATGGGAGCCACCAGGGTCTCCGCCTaGCTGCAGGGCCACGCGCGCACTCGACGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: AVTCMGATRVSA*LQGHARTRRFA
Trigger: CGCGAAGCGTCGAGTGCGCGCGTGGCCCTGCAGGCAGGCGGAGACCCTGGTGGCTCCCATACACGTAACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 72 bp GCGCACACACACCGTGCACACACACACACGCACACATaGGTAGCGGGAGCCCACGCCGGGCGTGTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: AHTHRAHTHTHT*VAGAHAGRVRD
Trigger: GTCCCGGACACGCCCGGCGTGGGCTCCCGCTACCCATGTGTGCGTGTGTGTGTGTGCACGGTGTGTGTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434178.6
CDS TCA 72 bp CGCACTCGACGCTTCGCGCCTGCCTCAGTTTCTCCGTaGGGCCGCACAGCCCCAGTCTCGGGAGGCGTGACA +
Preference number: 6 (lower is better)
Translates to: RTRRFAPASVSP*GRTAPVSGGVT
Trigger: TGTCACGCCTCCCGAGACTGGGGCTGTGCGGCCTCACGGAGAAACTGAGGCAGGCGCGAAGCGTCGAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp AATGAGTACCATGCCGGCGAAGTGGCCCGGCCTCTCTaGGGCCGTGAGGATGGCGATGGCGCCTCCCATGGA +
Preference number: 6 (lower is better)
Translates to: NEYHAGEVARPL*GREDGDGASHG
Trigger: TCCATGGGAGGCGCCATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGTACTCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS GCA 72 bp CTCCGCGCACACCGAGGCACCTCGCAGACGCACAAATaGGGGTGCCCAAGGCAAAGTCGCCCCCAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: LRAHRGTSQTHK*GCPRQSRPQGF
Trigger: GAAGCCTTGGGGGCGACTTTGCCTTGGGCACCCGCATTTGTGCGTCTGCGAGGTGCCTCGGTGTGCGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS GCA 72 bp CCAGCCTTGCAGGCGCTGCTCCCAGGTCAACCCACCTaGCTGCTGGGGCCCACACAGCCTTCTCAGGGACAT +
Preference number: 6 (lower is better)
Translates to: PALQALLPGQPT*LLGPTQPSQGH
Trigger: ATGTCCCTGAGAAGGCTGTGTGGGCCCCAGCAGGCAGGTGGGTTGACCTGGGAGCAGCGCCTGCAAGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 72 bp AACGGGATGGTGTGCAAGTGCCAGCCTTGCAGGCGCTaGTCCCAGGTCAACCCACCTGCCTGCTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: NGMVCKCQPCRR*SQVNPPACWGP
Trigger: TGGGCCCCAGCAGGCAGGTGGGTTGACCTGGGAGCAGCGCCTGCAAGGCTGGCACTTGCACACCATCCCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp AGGGCGCGCTCCACCCGTGAGACGGCATTCAGCAGTTaGATGCCGAAGCACACCTTCAGCCCTGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: RARSTRETAFSS*MPKHTFSPARQ
Trigger: CTGCCGGGCAGGGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000476682.1
ENST00000484451.1
ENST00000496306.5
ENST00000648300.1
CDS TCA 72 bp GGGCACAGTCAGCTTGGGGAGGGCGCGCTCCACCCGTaGGACGGCATTCAGCAGTTGGATGCCGAAGCACAC +
Preference number: 6 (lower is better)
Translates to: GHSQLGEGALHP*DGIQQLDAEAH
Trigger: GTGTGCTTCGGCATCCAACTGCTGAATGCCGTCTCACGGGTGGAGCGCGCCCTCCCCAAGCTGACTGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000476682.1
ENST00000484451.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 72 bp GAAGCTGTCATCGGAAATGCCGCTGGGAAAACCGGGTaGGCTTCGCCGGGTGTCTGCACCGGGGAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: EAVIGNAAGKTG*ASPGVCTGEGG
Trigger: CCCACCTTCCCCGGTGCAGACACCCGGCGAAGCCCACCCGGTTTTCCCAGCGGCATTTCCGATGACAGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS GCA 72 bp CGCGCTCCACCCGTGAGACGGCATTCAGCAGTTGGATaGCGAAGCACACCTTCAGCCCTGCCCGGCAGATCA +
Preference number: 6 (lower is better)
Translates to: RAPPVRRHSAVG*RSTPSALPGRS
Trigger: TGATCTGCCGGGCAGGGCTGAAGGTGTGCTTCGGCATCCAACTGCTGAATGCCGTCTCACGGGTGGAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000476682.1
ENST00000484451.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 72 bp AGAACCAGAGGCGAAATGAGTACCATGCCGGCGAAGTaGCCCGGCCTCTCTGCGGCCGTGAGGATGGCGATG +
Preference number: 6 (lower is better)
Translates to: RTRGEMSTMPAK*PGLSAAVRMAM
Trigger: CATCGCCATCCTCACGGCCGCAGAGAGGCCGGGCCACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 72 bp AGGAGGAAGCTAGGTGACGGGCGCCGCGGTAGACGCTaGGATAAGGTCCCTGCTCCAGGGAGCTTACGGTCT +
Preference number: 6 (lower is better)
Translates to: RRKLGDGRRGRR*DKVPAPGSLRS
Trigger: AGACCGTAAGCTCCCTGGAGCAGGGACCTTATCCCAGCGTCTACCGCGGCGCCCGTCACCTAGCTTCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp CGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGACCTAGCCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: RWARGTSLAAQG*ALSQQGPSRGG
Trigger: CCCTCCCCGGCTAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 72 bp GCACACCGAGGCACCTCGCAGACGCACAAATGCGGGTaGCCAAGGCAAAGTCGCCCCCAAGGCTTCTCACAA +
Preference number: 6 (lower is better)
Translates to: AHRGTSQTHKCG*PRQSRPQGFSQ
Trigger: TTGTGAGAAGCCTTGGGGGCGACTTTGCCTTGGGCACCCGCATTTGTGCGTCTGCGAGGTGCCTCGGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS CCA 72 bp GAATCAGAACCAGGCAAATCGGGCTGTTCCCTCATCTaGGCGGCCCCAAGGCAGCAGGAAGGCAGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: ESEPGKSGCSLI*AAPRQQEGSSE
Trigger: CTCGGAGCTGCCTTCCTGCTGCCTTGGGGCCGCCCAGATGAGGGAACAGCCCGATTTGCCTGGTTCTGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 72 bp GGAGGTCCTGGTAGGGAATGCTCTGCGGGGTCCGCCTaGGGGAACTTTCCTCTGGCATGCTGGAAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: GGPGRECSAGSA*GNFPLACWKGL
Trigger: AAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATTCCCTACCAGGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000479967.5
ENST00000494830.1
ENST00000648300.1
CDS CCA 72 bp CACTCAGGAACCGCAGGAAGGCTCTGTGTAACGGGATaGTGTGCAAGTGCCAGCCTTGCAGGCGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: HSGTAGRLCVTG*CASASLAGAAP
Trigger: GGGAGCAGCGCCTGCAAGGCTGGCACTTGCACACCATCCCGTTACACAGAGCCTTCCTGCGGTTCCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp TTGGGGGAGCTGGCCAGGCAGCCGCTGCGCCCAAGGTaGGAAGTCACGTCTGAATTTTGCCCGCTCTATACC +
Preference number: 6 (lower is better)
Translates to: LGELARQPLRPR*EVTSEFCPLYT
Trigger: GGTATAGAGCGGGCAAAATTCAGACGTGACTTCCCACCTTGGGCGCAGCGGCTGCCTGGCCAGCTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp CAGCCCCCTGCCTCTGAGGATACCGAAGCTTACTGCCCTCCAGCCTaGGCATCCAGGCAAGCAGATCTCATTCTGCAGCCGCCACTGTGC +
Preference number: 6 (lower is better)
Translates to: QPPASEDTEAYCPPA*ASRQADLILQPPLC
Trigger: GCACAGTGGCGGCTGCAGAATGAGATCTGCTTGCCTGGATGCCAAGGCTGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGCAGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp CTGCTCCTGCTCTCCCACAACCTCCATCCTGAGCTGTaGGCACACCAGGGAAGCCTCAGAGGGGAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: LLLLSHNLHPEL*AHQGSLRGELL
Trigger: GAGCAACTCCCCTCTGAGGCTTCCCTGGTGTGCTCACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS GCA 72 bp TGGCAGCCCCCTGCCTCTGAGGATACCGAAGCTTACTaGCCTCCAGCCTTGGCATCCAGGCAAGCAGATCTC +
Preference number: 6 (lower is better)
Translates to: WQPPASEDTEAY*PPALASRQADL
Trigger: GAGATCTGCTTGCCTGGATGCCAAGGCTGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGCAGGGGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp CCGTGGGTCTTGGCACCAGCGGCCACTGATGTTCTTTaGGGGGACAAGATTGCTGTGCTTGCCCACCCTCCC +
Preference number: 6 (lower is better)
Translates to: PWVLAPAATDVL*GDKIAVLAHPP
Trigger: GGGAGGGTGGGCAAGCACAGCAATCTTGTCCCCCAAAAGAACATCAGTGGCCGCTGGTGCCAAGACCCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp GGCGTAAGCCACGGCGCCCGGCCAGTCTCCCTGTCTTaGCAAAAACCCTGGGAGATGAGGCTTCATCCTCAC +
Preference number: 6 (lower is better)
Translates to: GVSHGARPVSLS*QKPWEMRLHPH
Trigger: GTGAGGATGAAGCCTCATCTCCCAGGGTTTTTGCAAAGACAGGGAGACTGGCCGGGCGCCGTGGCTTACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 72 bp CCGCTGCGCCCAAGGTGGGAAGTCACGTCTGAATTTTaGCCGCTCTATACCCTCCCCATGATCGCTCATGGG +
Preference number: 6 (lower is better)
Translates to: PLRPRWEVTSEF*PLYTLPMIAHG
Trigger: CCCATGAGCGATCATGGGGAGGGTATAGAGCGGGCAAAATTCAGACGTGACTTCCCACCTTGGGCGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp GAGCACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTaGCAGCACAAGGTTGAGCACTTTCGCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: EHAGVDGPEGQV*QHKVEHFRSKD
Trigger: GTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000476682.1
ENST00000487473.5
ENST00000496306.5
ENST00000648300.1
CDS CCA 72 bp GCAGTGGGCTGTGGCTCTGTGGCCTTCACTAGACTCTaGCTGTGTAAGGACGAGTGTTCCAGGGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: AVGCGSVAFTRL*LCKDECSRALA
Trigger: CGCTAAGGCCCTGGAACACTCGTCCTTACACAGCCAGAGTCTAGTGAAGGCCACAGAGCCACAGCCCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp CGTGGGTCTTGGCACCAGCGGCCACTGATGTTCTTTTaGGGGACAAGATTGCTGTGCTTGCCCACCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RGSWHQRPLMFF*GTRLLCLPTLP
Trigger: AGGGAGGGTGGGCAAGCACAGCAATCTTGTCCCCCAAAAGAACATCAGTGGCCGCTGGTGCCAAGACCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp CTAACCTTCCCGTGGGTCTTGGCACCAGCGGCCACTGATGTTCTTTaGGGGGACAAGATTGCTGTGCTTGCCCACCCTCCCTGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: LTFPWVLAPAATDVL*GDKIAVLAHPPCRP
Trigger: TGGCCTACAGGGAGGGTGGGCAAGCACAGCAATCTTGTCCCCCAAAAGAACATCAGTGGCCGCTGGTGCCAAGACCCACGGGAAGGTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp TTCCTTCTTAGTGCAAAGGTGGCAGCCCCCTGCCTCTaGGGATACCGAAGCTTACTGCCCTCCAGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: FLLSAKVAAPCL*GYRSLLPSSLG
Trigger: GCCAAGGCTGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGCAGGGGGCTGCCACCTTTGCACTAAGAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp AATGCTCTGCGGGGTCCGCCTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTCAGGTCCTGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: NALRGPPGGTFL*HAGRVFRSCFH
Trigger: ATGGAAACAGGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 72 bp GGGGACCCATCACCTGATTCTGCAGGGACCTGGGCCTaGAGGTGCCAGTCCATCTTCAGGATCAGTCATTTG +
Preference number: 6 (lower is better)
Translates to: GDPSPDSAGTWA*RCQSIFRISHL
Trigger: CAAATGACTGATCCTGAAGATGGACTGGCACCTCCAGGCCCAGGTCCCTGCAGAATCAGGTGATGGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp GCCTCTGAGGATACCGAAGCTTACTGCCCTCCAGCCTaGGCATCCAGGCAAGCAGATCTCATTCTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: ASEDTEAYCPPA*ASRQADLILQP
Trigger: CGGCTGCAGAATGAGATCTGCTTGCCTGGATGCCAAGGCTGGAGGGCAGTAAGCTTCGGTATCCTCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp TTGCAGATTCAGGATTGGCAAGAACCAGAGGCGAAATaGGTACCATGCCGGCGAAGTGGCCCGGCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LQIQDWQEPEAK*VPCRRSGPASL
Trigger: CAGAGAGGCCGGGCCACTTCGCCGGCATGGTACTCATTTCGCCTCTGGTTCTTGCCAATCCTGAATCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000496306.5
ENST00000648300.1
CDS TCA 72 bp TGGCGCCTCAAGGATCAGCGCAGCTTGAGCCATCCTTaGAGTGGTTTCACAGAGGTTGGGGAAGGGGGAACA +
Preference number: 6 (lower is better)
Translates to: WRLKDQRSLSHP*SGFTEVGEGGT
Trigger: TGTTCCCCCTTCCCCAACCTCTGTGAAACCACTTCAAGGATGGCTCAAGCTGCGCTGATCCTTGAGGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp CCACAAACACCTCCTCCCAGTGCTGCCCTGAGAGACTaGTTGTATTGGCCGAAGTGGAGCCCTGGCATCAGT +
Preference number: 6 (lower is better)
Translates to: PQTPPPSAALRD*LYWPKWSPGIS
Trigger: ACTGATGCCAGGGCTCCACTTCGGCCAATACAATCAGTCTCTCAGGGCAGCACTGGGAGGAGGTGTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GTGCCAGGTGCTTTGCTGAGCCCTGGGCTCCGACTTTaGCTGTCTAGTATAGAAGCATGCGGCAGCCTGACT +
Preference number: 6 (lower is better)
Translates to: VPGALLSPGLRL*LSSIEACGSLT
Trigger: AGTCAGGCTGCCGCATGCTTCTATACTAGACAGTCAAAGTCGGAGCCCAGGGCTCAGCAAAGCACCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp CGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTTaGGCACTTTCGCAGCAAGGACCCAAAAAGGACGTG +
Preference number: 6 (lower is better)
Translates to: RWARGTSLAAQG*ALSQQGPKKDV
Trigger: CACGTCCTTTTTGGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496306.5
CDS GCA 72 bp TCACATTGTCGAGGTCGACCAGATGACTGCTGCTCCTaGTCTCCCACAACCTCCATCCTGAGCTGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: SHCRGRPDDCCS*SPTTSILSCEH
Trigger: GTGCTCACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS GCA 72 bp CCAGATGGATCACATTGTCGAGGTCGACCAGATGACTaGTGCTCCTGCTCTCCCACAACCTCCATCCTGAGC +
Preference number: 6 (lower is better)
Translates to: PDGSHCRGRPDD*CSCSPTTSILS
Trigger: GCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGATCCATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS CCA 72 bp AATGCTCTGCGGGGTCCGCCTGGGGGAACTTTCCTCTaGCATGCTGGAAGGGTCTTCAGGTCATTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: NALRGPPGGTFL*HAGRVFRSFLA
Trigger: TGCAAGAAATGACCTGAAGACCCTTCCAGCATGCCAGAGGAAAGTTCCCCCAGGCGGACCCCGCAGAGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494830.1
CDS CAA 72 bp TTGGCGCCTCAAGGATCAGCGCAGCTTGAGCCATCCTaGAAGTGGTTTCACAGAGGTTGGGGAAGGGGGAAC +
Preference number: 6 (lower is better)
Translates to: LAPQGSAQLEPS*KWFHRGWGRGN
Trigger: GTTCCCCCTTCCCCAACCTCTGTGAAACCACTTCAAGGATGGCTCAAGCTGCGCTGATCCTTGAGGCGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp GTCCAAGCCCACCACCAGATTTCTCATTGTGCCACCATTTGTGTTTaGGGGACCCATCACCTGATTCTGCAGGGACCTGGGCCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: VQAHHQISHCATICV*GTHHLILQGPGPGG
Trigger: ACCTCCAGGCCCAGGTCCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTGGGCTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp ACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGGACCCAAAAAGGACGTGGAATCCAA +
Preference number: 6 (lower is better)
Translates to: TLESMGPRDKFGSTR*STFAARTQKGRGIQ
Trigger: TTGGATTCCACGTCCTTTTTGGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496306.5
CDS TCA 72 bp TCCAGTACCTGCAGAAGAGGTACTGTCCGTCTGCATTaGCCAGGTGAGGGAGGTCCTGGTAGGGAATGCTCT +
Preference number: 6 (lower is better)
Translates to: SSTCRRGTVRLH*PGEGGPGRECS
Trigger: AGAGCATTCCCTACCAGGACCTCCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTCTGCAGGTACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000479967.5
ENST00000494830.1
ENST00000648300.1
CDS TCA 72 bp CTGCCTGCTGGGGCCCACACAGCCTTCTCAGGGACATaGCTGTTTTATGTAAGCCAGCTTCCTACCCATTCC +
Preference number: 6 (lower is better)
Translates to: LPAGAHTAFSGT*LFYVSQLPTHS
Trigger: GGAATGGGTAGGAAGCTGGCTTACATAAAACAGTCATGTCCCTGAGAAGGCTGTGTGGGCCCCAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp TCTAACCTTCCCGTGGGTCTTGGCACCAGCGGCCACTaGTGTTCTTTTGGGGGACAAGATTGCTGTGCTTGC +
Preference number: 6 (lower is better)
Translates to: SNLPVGLGTSGH*CSFGGQDCCAC
Trigger: GCAAGCACAGCAATCTTGTCCCCCAAAAGAACATCAGTGGCCGCTGGTGCCAAGACCCACGGGAAGGTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GGATTGCTGGGTTTGATTCCTAGCTCTGCTGCCTCGTaGACATGGGCTGGGATTTCCACATCGCTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: GLLGLIPSSAAS*TWAGISTSLSL
Trigger: GAGGCTCAGCGATGTGGAAATCCCAGCCCATGTTCACGAGGCAGCAGAGCTAGGAATCAAACCCAGCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp TTCTCTCGGGTGGAAGTAGAAATAGCACCAGCTCGATaGGGAGGCTGTGTGGCAGAGGGAAGGATTGCTGGG +
Preference number: 6 (lower is better)
Translates to: FSRVEVEIAPAR*GGCVAEGRIAG
Trigger: CCCAGCAATCCTTCCCTCTGCCACACAGCCTCCTCATCGAGCTGGTGCTATTTCTACTTCCACCCGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 72 bp GGGTTTCCAGTACCTGCAGAAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGGAGGTCCTGGTAGGGAAT +
Preference number: 6 (lower is better)
Translates to: GFPVPAEEVLSV*IDQVREVLVGN
Trigger: ATTCCCTACCAGGACCTCCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTCTGCAGGTACTGGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000479967.5
ENST00000494830.1
ENST00000648300.1
CDS GCA 72 bp CAAGGCAAAGTCGCCCCCAAGGCTTCTCACAAACTTTaGTTCCTGTGCGTCTCCGACAGCACAGGACACGTA +
Preference number: 6 (lower is better)
Translates to: QGKVAPKASHKL*FLCVSDSTGHV
Trigger: TACGTGTCCTGTGCTGTCGGAGACGCACAGGAAGCAAAGTTTGTGAGAAGCCTTGGGGGCGACTTTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434178.6
ENST00000453507.6
CDS GCA 72 bp GATGGATCACATTGTCGAGGTCGACCAGATGACTGCTaGTCCTGCTCTCCCACAACCTCCATCCTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: DGSHCRGRPDDC*SCSPTTSILSC
Trigger: ACAGCTCAGGATGGAGGTTGTGGGAGAGCAGGAGCAGCAGTCATCTGGTCGACCTCGACAATGTGATCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479967.5
CDS GCA 72 bp AGGTTCGTCTCCCAAGCCTGCGTCCTTAAGCCTGCATaGCCAAGGACTCTCCCTTCTGACTCAGCCTCTATT +
Preference number: 6 (lower is better)
Translates to: RFVSQACVLKPA*PRTLPSDSASI
Trigger: AATAGAGGCTGAGTCAGAAGGGAGAGTCCTTGGGCATGCAGGCTTAAGGACGCAGGCTTGGGAGACGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp AAATGTCGACCTCTGTCTTATTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGGACAAGTTTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: KCRPLSYSERAR*SRWARGTSLAA
Trigger: TGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGAATAAGACAGAGGTCGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000476682.1
ENST00000496306.5
ENST00000648300.1
CDS CCA 72 bp TATGTAAGCCAGCTTCCTACCCATTCCCTGACCAGATaGCTCAGAGCCAAGAAAAGGCCCAGGGACCCAGCA +
Preference number: 6 (lower is better)
Translates to: YVSQLPTHSLTR*LRAKKRPRDPA
Trigger: TGCTGGGTCCCTGGGCCTTTTCTTGGCTCTGAGCCATCTGGTCAGGGAATGGGTAGGAAGCTGGCTTACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp TGGACTCCAGCCGTTGCTCACGTCAGTCTCTCTGCCTaGCGTTTCCGGTCTCATTACAGCCTCCTCATTACT +
Preference number: 6 (lower is better)
Translates to: WTPAVAHVSLSA*RFRSHYSLLIT
Trigger: AGTAATGAGGAGGCTGTAATGAGACCGGAAACGCCAGGCAGAGAGACTGACGTGAGCAACGGCTGGAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 72 bp TCGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGGACCCAAAAAGGACGT +
Preference number: 6 (lower is better)
Translates to: SMGPRDKFGSTR*STFAARTQKGR
Trigger: ACGTCCTTTTTGGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496306.5
CDS CAA 72 bp TTCAGTAGGGAAATCAGTGGGCCACCAGGCCCCTACTaGCCTGTGTGTCCACCTAGATCTCTAGGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: FSREISGPPGPY*PVCPPRSLGQD
Trigger: ATCCTGCCCTAGAGATCTAGGTGGACACACAGGCAAGTAGGGGCCTGGTGGCCCACTGATTTCCCTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 90 bp CCATTTCGTCCAAGCCCACCACCAGATTTCTCATTGTGCCACCATTaGTGTTTTGGGGACCCATCACCTGATTCTGCAGGGACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PFRPSPPPDFSLCHH*CFGDPSPDSAGTWA
Trigger: GGCCCAGGTCCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTGGGCTTGGACGAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp TGTGCAAAAGCCCAGGGAACACAGCAGGAGCTTAACACATGCTCATaGAACTTGAGCCTGATTGAGGCCCAAACCTTCCCACCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CAKAQGTQQELNTCS*NLSLIEAQTFPPPP
Trigger: GGGAGGGGGTGGGAAGGTTTGGGCCTCAATCAGGCTCAAGTTCAATGAGCATGTGTTAAGCTCCTGCTGTGTTCCCTGGGCTTTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GCACACCTTCAGCCCTGCCCGGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTCTGTCTTATTCCGAGA +
Preference number: 6 (lower is better)
Translates to: AHLQPCPADQGV*VINVDLCLIPR
Trigger: TCTCGGAATAAGACAGAGGTCGACATTTATAACTCAGACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000476682.1
ENST00000496306.5
ENST00000648300.1
CDS GCA 72 bp TTCCTGTGTCCTAGGCCCGCACAAGTGTGGCGTGACTaGCCACCACGATTGTTTCTCAACCATCCAGTATCA +
Preference number: 6 (lower is better)
Translates to: FLCPRPAQVWRD*PPRLFLNHPVS
Trigger: TGATACTGGATGGTTGAGAAACAATCGTGGTGGGCAGTCACGCCACACTTGTGCGGGCCTAGGACACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS GCA 72 bp TGCGGAAGGGCCCACAGGAGCCACACAGAGAAAGTGTaGGTCCATTTCTCTCGGGTGGAAGTAGAAATAGCA +
Preference number: 6 (lower is better)
Translates to: CGRAHRSHTEKV*VHFSRVEVEIA
Trigger: TGCTATTTCTACTTCCACCCGAGAGAAATGGACGCACACTTTCTCTGTGTGGCTCCTGTGGGCCCTTCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp ATGTGCTGGCGTTTGCATTCCACAACCACGACAGCCTaGAGAATCAGAACCAGGCAAATCGGGCTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: MCWRLHSTTTTA*RIRTRQIGLFP
Trigger: AGGGAACAGCCCGATTTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CAA 72 bp GGGCCAGCTCCAAGAACGAGCCTGGGAAAGGAAAACTaGGAATTCTGGGAACTCTGCACAAGGACTGGGGTA +
Preference number: 6 (lower is better)
Translates to: GPAPRTSLGKEN*EFWELCTRTGV
Trigger: TACCCCAGTCCTTGTGCAGAGTTCCCAGAATTCCAAGTTTTCCTTTCCCAGGCTCGTTCTTGGAGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp ACGCTGGAGTCGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGGACCTTGAAAGTTGTTGCAGATTCA +
Preference number: 6 (lower is better)
Translates to: TLESMGPRDKFGSTR*STFAARTLKVVADS
Trigger: TGAATCTGCAACAACTTTCAAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000487473.5
ENST00000648300.1
CDS CAA 90 bp ACCACAAACACCTCCTCCCAGTGCTGCCCTGAGAGACTGATTGTATaGGCCGAAGTGGAGCCCTGGCATCAGTGCCTTTTTAAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: TTNTSSQCCPERLIV*AEVEPWHQCLFKVP
Trigger: GGGAACTTTAAAAAGGCACTGATGCCAGGGCTCCACTTCGGCCAATACAATCAGTCTCTCAGGGCAGCACTGGGAGGAGGTGTTTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GCACACCTTCAGCCCTGCCCGGCAGATCAGGGGGTCTaGGTTATAAATGTCGACCTTGAAAGTTGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: AHLQPCPADQGV*VINVDLESCCR
Trigger: TCTGCAACAACTTTCAAGGTCGACATTTATAACTCAGACCCCCTGATCTGCCGGGCAGGGCTGAAGGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453507.6
ENST00000484451.1
CDS CCA 72 bp GAATCCACATGCTGCAACACATCCCTGACGAAAACGTaGAAGTCAGACACTACCATCCTCTCCCCTTCGCTC +
Preference number: 6 (lower is better)
Translates to: ESTCCNTSLTKT*KSDTTILSPSL
Trigger: GAGCGAAGGGGAGAGGATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGCATGTGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS CCA 72 bp GGCCAGCTCCAAGAACGAGCCTGGGAAAGGAAAACTTaGAATTCTGGGAACTCTGCACAAGGACTGGGGTAT +
Preference number: 6 (lower is better)
Translates to: GQLQERAWERKT*NSGNSAQGLGY
Trigger: ATACCCCAGTCCTTGTGCAGAGTTCCCAGAATTCCAAGTTTTCCTTTCCCAGGCTCGTTCTTGGAGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp CTTCATAAATCTCTGTCTTATTCCGAGAGAGCACGCTaGAGTCGATGGGCCCGAGGGACAAGTTTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LHKSLSYSERAR*SRWARGTSLAA
Trigger: TGCTGCCAAACTTGTCCCTCGGGCCCATCGACTCCAGCGTGCTCTCTCGGAATAAGACAGAGATTTATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487473.5
CDS CAA 72 bp TCGATGGGCCCGAGGGACAAGTTTGGCAGCACAAGGTaGAGCACTTTCGCAGCAAGGACCTTGAAAGTTGTT +
Preference number: 6 (lower is better)
Translates to: SMGPRDKFGSTR*STFAARTLKVV
Trigger: AACAACTTTCAAGGTCCTTGCTGCGAAAGTGCTCAACCTTGTGCTGCCAAACTTGTCCCTCGGGCCCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000487473.5
ENST00000648300.1
CDS CAA 72 bp CACCACCAGATTTCTCATTGTGCCACCATTTGTGTTTaGGGGACCCATCACCTGATTCTGCAGGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: HHQISHCATICV*GTHHLILQGPG
Trigger: CCCAGGTCCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp CCAAGCCCACCACCAGATTTCTCATTGTGCCACCATTaGTGTTTTGGGGACCCATCACCTGATTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PSPPPDFSLCHH*CFGDPSPDSAG
Trigger: CCCTGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp TTGCCCGCTCTATACCCTCCCCATGATCGCTCATGGGTTGTAATTTaGCATCACTGGCAAGAGTTGCCTGGGATGAGCTCTGGCCATTTC +
Preference number: 6 (lower is better)
Translates to: LPALYPPHDRSWVVI*HHWQELPGMSSGHF
Trigger: GAAATGGCCAGAGCTCATCCCAGGCAACTCTTGCCAGTGATGCAAAATTACAACCCATGAGCGATCATGGGGAGGGTATAGAGCGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp ATGCTGGAAGGGTCTTCAGGTCCTGTTTCCATTATGTGCTGGCGTTaGCATTCCACAACCACGACAGCCTGGAGAATCAGAACCAGGCAA +
Preference number: 6 (lower is better)
Translates to: MLEGSSGPVSIMCWR*HSTTTTAWRIRTRQ
Trigger: TTGCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAATGGAAACAGGACCTGAAGACCCTTCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CAA 90 bp CCAGCATCCACACCATTTCGTCCAAGCCCACCACCAGATTTCTCATaGTGCCACCATTTGTGTTTTGGGGACCCATCACCTGATTCTGCA +
Preference number: 6 (lower is better)
Translates to: PASTPFRPSPPPDFS*CHHLCFGDPSPDSA
Trigger: TGCAGAATCAGGTGATGGGTCCCCAAAACACAAATGGTGGCACAATGAGAAATCTGGTGGTGGGCTTGGACGAAATGGTGTGGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GGAGCTTACGGTCTATTCACTAACGTCAAAGAGCAGTaGGTGCTGTTACGTGTATGGGAGCCACCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: GAYGLFTNVKEQ*VLLRVWEPPGS
Trigger: AGACCCTGGTGGCTCCCATACACGTAACAGCACTCACTGCTCTTTGACGTTAGTGAATAGACCGTAAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp GTGCAATTGCTGAGCACCATGTTGTTCCTCAGGTCCTaGGGTCCCCAGCAGGTTTGCCTTTTATCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: VQLLSTMLFLRS*GPQQVCLLSLP
Trigger: AGGAAGAGATAAAAGGCAAACCTGCTGGGGACCTCAGGACCTGAGGAACAACATGGTGCTCAGCAATTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp CTCTCCCACTTACAAGGATTTTCTCCTGTTCAGCTCTaGAAAGAGATGGGGCAGCTGGTCTGCACCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LSHLQGFSPVQL*KEMGQLVCTFS
Trigger: ACTGAAGGTGCAGACCAGCTGCCCCATCTCTTTGCAGAGCTGAACAGGAGAAAATCCTTGTAAGTGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CCA 72 bp CCCCATGATCGCTCATGGGTTGTAATTTTGCATCACTaGCAAGAGTTGCCTGGGATGAGCTCTGGCCATTTC +
Preference number: 6 (lower is better)
Translates to: PHDRSWVVILHH*QELPGMSSGHF
Trigger: GAAATGGCCAGAGCTCATCCCAGGCAACTCTTGCCAGTGATGCAAAATTACAACCCATGAGCGATCATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp GGGTCTTCAGGTCCTGTTTCCATTATGTGCTGGCGTTaGCATTCCACAACCACGACAGCCTGGAGAATCAGA +
Preference number: 6 (lower is better)
Translates to: GSSGPVSIMCWR*HSTTTTAWRIR
Trigger: TCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAATGGAAACAGGACCTGAAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CAA 72 bp CGCTCATGGGTTGTAATTTTGCATCACTGGCAAGAGTaGCCTGGGATGAGCTCTGGCCATTTCTCTGGGGTA +
Preference number: 6 (lower is better)
Translates to: RSWVVILHHWQE*PGMSSGHFSGV
Trigger: TACCCCAGAGAAATGGCCAGAGCTCATCCCAGGCAACTCTTGCCAGTGATGCAAAATTACAACCCATGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp GGGCAGGATTATTCTAGATGCAGTGATCTCCAAGACAAGTGCTGGTaGTCAGGCTCTGCTCCTACAGCCTGCGATGAAAAGGTAAGGGTT +
Preference number: 6 (lower is better)
Translates to: GQDYSRCSDLQDKCW*SGSAPTACDEKVRV
Trigger: AACCCTTACCTTTTCATCGCAGGCTGTAGGAGCAGAGCCTGACAACCAGCACTTGTCTTGGAGATCACTGCATCTAGAATAATCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 90 bp GCTGAGCACCATGTTGTTCCTCAGGTCCTGAGGTCCCCAGCAGGTTaGCCTTTTATCTCTTCCTTTCAGCATCCTCTTACGTTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: AEHHVVPQVLRSPAG*PFISSFQHPLTLVV
Trigger: TACAACCAACGTAAGAGGATGCTGAAAGGAAGAGATAAAAGGCAAACCTGCTGGGGACCTCAGGACCTGAGGAACAACATGGTGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp GGCCAGTCTCCCTGTCTTTGCAAAAACCCTGGGAGATaGGGCTTCATCCTCACTGAACAGATGAGAAAATGG +
Preference number: 6 (lower is better)
Translates to: GQSPCLCKNPGR*GFILTEQMRKW
Trigger: CCATTTTCTCATCTGTTCAGTGAGGATGAAGCCTCATCTCCCAGGGTTTTTGCAAAGACAGGGAGACTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp GGACGTGCCTGCTTTCCTTTCACATTTTGCCATGATTaGAAGTTTCCTGAGGCCTCCCAGAAGCAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: GRACFPFTFCHD*KFPEASQKQKP
Trigger: TGGCTTCTGCTTCTGGGAGGCCTCAGGAAACTTTCAATCATGGCAAAATGTGAAAGGAAAGCAGGCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp GGTCTTCAGGTCCTGTTTCCATTATGTGCTGGCGTTTaGATTCCACAACCACGACAGCCTGGAGAATCAGAA +
Preference number: 6 (lower is better)
Translates to: GLQVLFPLCAGV*IPQPRQPGESE
Trigger: TTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAGCACATAATGGAAACAGGACCTGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265052.10
ENST00000434178.6
ENST00000453507.6
CDS CCA 72 bp ATGGGTCAGGAATGTTCAAGAGTCCAGCTAGTATCATaGGCCAGCTCCAAGAACGAGCCTGGGAAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: MGQECSRVQLVS*ASSKNEPGKGK
Trigger: TTTTCCTTTCCCAGGCTCGTTCTTGGAGCTGGCCCATGATACTAGCTGGACTCTTGAACATTCCTGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp AGAGATGCTCTGAGGTTTGAGGAGAGTAGAACATACTaGAAATACCCCACAGAATCCCCGGAAAGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: RDALRFEESRTY*KYPTESPESPG
Trigger: TCCTGGGCTTTCCGGGGATTCTGTGGGGTATTTCCAGTATGTTCTACTCTCCTCAAACCTCAGAGCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 90 bp GTTTCCAGCACGTGCTCGCTCCCCGCCTTCTCCCATTCCCTCCCTTaGTATGGTTTCAGAGGAGAAAAATGTATAAATTCTGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: VSSTCSLPAFSHSLP*YGFRGEKCINSGIL
Trigger: GAGAATGCCAGAATTTATACATTTTTCTCCTCTGAAACCATACAAAGGGAGGGAATGGGAGAAGGCGGGGAGCGAGCACGTGCTGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CAA 90 bp GCTTTTTATTTCAGTAGGGAAATCAGTGGGCCACCAGGCCCCTACTaGCCTGTGTGTCCACCTAGATCTCTAGGGCAGGATTATTCTAGA +
Preference number: 6 (lower is better)
Translates to: AFYFSREISGPPGPY*PVCPPRSLGQDYSR
Trigger: TCTAGAATAATCCTGCCCTAGAGATCTAGGTGGACACACAGGCAAGTAGGGGCCTGGTGGCCCACTGATTTCCCTACTGAAATAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp CTTTCTGCATGGAATCCACATGCTGCAACACATCCCTaGCGAAAACGTGGAAGTCAGACACTACCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LSAWNPHAATHP*RKRGSQTLPSS
Trigger: AGAGGATGGTAGTGTCTGACTTCCACGTTTTCGTCAGGGATGTGTTGCAGCATGTGGATTCCATGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265052.10
ENST00000398101.7
ENST00000398104.5
ENST00000434178.6
ENST00000453507.6
ENST00000465597.5
ENST00000479967.5
ENST00000484451.1
ENST00000487473.5
ENST00000493611.1
ENST00000648300.1
CDS TCA 72 bp CGGGCTTTTCTCCTAAAGGGCTTTGTTCCATGTGCATaGACCTATTCGGAGTTCCATGTGGTCAACACTCCT +
Preference number: 6 (lower is better)
Translates to: RAFLLKGFVPCA*TYSEFHVVNTP
Trigger: AGGAGTGTTGACCACATGGAACTCCGAATAGGTTCATGCACATGGAACAAAGCCCTTTAGGAGAAAAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp TTGCAAAAACCCTGGGAGATGAGGCTTCATCCTCACTaGACAGATGAGAAAATGGAGGCTCGGTACCATGAG +
Preference number: 6 (lower is better)
Translates to: LQKPWEMRLHPH*TDEKMEARYHE
Trigger: CTCATGGTACCGAGCCTCCATTTTCTCATCTGTTCAGTGAGGATGAAGCCTCATCTCCCAGGGTTTTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS TCA 72 bp CTGATGGGATTTCTTTCCTGCATTTCCCTTGGCTACTaGGGAGCACGGCTGGAACTGCTAATTAGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: LMGFLSCISLGY*GARLELLISQH
Trigger: ATGCTGACTAATTAGCAGTTCCAGCCGTGCTCCTCAGTAGCCAAGGGAAATGCAGGAAAGAAATCCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493611.1
CDS CCA 72 bp TACAAGGATTTTCTCCTGTTCAGCTCTGCAAAGAGATaGGGCAGCTGGTCTGCACCTTCAGTTAGAATCCTG +
Preference number: 6 (lower is better)
Translates to: YKDFLLFSSAKR*GSWSAPSVRIL
Trigger: CAGGATTCTAACTGAAGGTGCAGACCAGCTGCCCCATCTCTTTGCAGAGCTGAACAGGAGAAAATCCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CCA 72 bp ATGGTAGAAATCAGTAATTCCTTCTTAGTGCAAAGGTaGCAGCCCCCTGCCTCTGAGGATACCGAAGCTTAC +
Preference number: 6 (lower is better)
Translates to: MVEISNSFLVQR*QPPASEDTEAY
Trigger: GTAAGCTTCGGTATCCTCAGAGGCAGGGGGCTGCCACCTTTGCACTAAGAAGGAATTACTGATTTCTACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp ATGGGTTGTAATTTTGCATCACTGGCAAGAGTTGCCTaGGATGAGCTCTGGCCATTTCTCTGGGGTACTGAA +
Preference number: 6 (lower is better)
Translates to: MGCNFASLARVA*DELWPFLWGTE
Trigger: TTCAGTACCCCAGAGAAATGGCCAGAGCTCATCCCAGGCAACTCTTGCCAGTGATGCAAAATTACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp ATGTCTCTGGCAGTAGAGGTGACAAGGATGGTGACCTaGAGGCCAGTAAAACTCAGTCTCAGGACTTTTCTA +
Preference number: 6 (lower is better)
Translates to: MSLAVEVTRMVT*RPVKLSLRTFL
Trigger: TAGAAAAGTCCTGAGACTGAGTTTTACTGGCCTCCAGGTCACCATCCTTGTCACCTCTACTGCCAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 72 bp TGGGACACAAAGATGAGGGCCCTGATATTTCTGGGATaGGCTGATGGGATTTCTTTCCTGCATTTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: WDTKMRALIFLG*ADGISFLHFPW
Trigger: CCAAGGGAAATGCAGGAAAGAAATCCCATCAGCCAATCCCAGAAATATCAGGGCCCTCATCTTTGTGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493611.1
CDS TCA 72 bp CACAAAGATGAGGGCCCTGATATTTCTGGGATTGGCTaGTGGGATTTCTTTCCTGCATTTCCCTTGGCTACT +
Preference number: 6 (lower is better)
Translates to: HKDEGPDISGIG*WDFFPAFPLAT
Trigger: AGTAGCCAAGGGAAATGCAGGAAAGAAATCCCATCAGCCAATCCCAGAAATATCAGGGCCCTCATCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493611.1
CDS CAA 72 bp TTCAGGTCCTTTTCATTCAGCATAATTCCAGGTGGGTaGGGTGTAGCAGTCCACAGTATGGAAGTACCACAG +
Preference number: 6 (lower is better)
Translates to: FRSFSFSIIPGG*GVAVHSMEVPQ
Trigger: CTGTGGTACTTCCATACTGTGGACTGCTACACCCAACCCACCTGGAATTATGCTGAATGAAAAGGACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 90 bp AGTAGGGAAAAGCACATCCACTCCACCTTTGCAGATGTAGAAGTCTaGTATCTGGCTTTTTATTTCAGTAGGGAAATCAGTGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: SREKHIHSTFADVEV*YLAFYFSREISGPP
Trigger: TGGTGGCCCACTGATTTCCCTACTGAAATAAAAAGCCAGATACAAGACTTCTACATCTGCAAAGGTGGAGTGGATGTGCTTTTCCCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 72 bp TCAAACACGGATCAAATGTCTGTGAACTCCAAGAATTaGGAGCTCGTCTGCATTGGGATCTGTGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: SNTDQMSVNSKN*ELVCIGICAFK
Trigger: TTTGAAAGCACAGATCCCAATGCAGACGAGCTCCCAATTCTTGGAGTTCACAGACATTTGATCCGTGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp AGCTGTGAAATGCTGAAATTAGAATTGGACGGAAGGTaGCAAGCAGTGAATTCTCAGTGTACATCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SCEMLKLELDGR*QAVNSQCTSRA
Trigger: TGCCCTTGATGTACACTGAGAATTCACTGCTTGCCACCTTCCGTCCAATTCTAATTTCAGCATTTCACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp GAGGTGAATGCATCATGGGAATGGATTTCTCATGAATaGTTTAGTGCCATCCCCCTTGGTATTGTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: EVNASWEWISHE*FSAIPLGIVLV
Trigger: TACCAAGACAATACCAAGGGGGATGGCACTAAACCATTCATGAGAAATCCATTCCCATGATGCATTCACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp AACACAAATGTTCTTGTGTGGCCTTCAGAGATGCTCTaGGGTTTGAGGAGAGTAGAACATACTGGAAATACC +
Preference number: 6 (lower is better)
Translates to: NTNVLVWPSEML*GLRRVEHTGNT
Trigger: GGTATTTCCAGTATGTTCTACTCTCCTCAAACCTCAGAGCATCTCTGAAGGCCACACAAGAACATTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp TGCCATCCCCCTTGGTATTGTCTTGGTAATAGTGAGTaGGTTCTCGTGAGATCTGGTTGTTTAAAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: CHPPWYCLGNSE*VLVRSGCLKVC
Trigger: ACACACTTTTAAACAACCAGATCTCACGAGAACTCACTCACTATTACCAAGACAATACCAAGGGGGATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CCA 72 bp GGAAAACTTGGAATTCTGGGAACTCTGCACAAGGACTaGGGTATTTTCAAACACGGATCAAATGTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: GKLGILGTLHKD*GIFKHGSNVCE
Trigger: TTCACAGACATTTGATCCGTGTTTGAAAATACCCCAGTCCTTGTGCAGAGTTCCCAGAATTCCAAGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp TGGGGTATTTTCAAACACGGATCAAATGTCTGTGAACTCCAAGAATaGGGAGCTCGTCTGCATTGGGATCTGTGCTTTCAAAGGTTAAAA +
Preference number: 6 (lower is better)
Translates to: WGIFKHGSNVCELQE*GARLHWDLCFQRLK
Trigger: TTTTAACCTTTGAAAGCACAGATCCCAATGCAGACGAGCTCCCAATTCTTGGAGTTCACAGACATTTGATCCGTGTTTGAAAATACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 90 bp TCTAACAGGTCATCTGCTGAAGGATATCTGCGTTGTTTCCAGTGTTaGTTGATTAAGAATAAAGCTGCTGTAAACCTCCGTGTACATGTT +
Preference number: 6 (lower is better)
Translates to: SNRSSAEGYLRCFQC*LIKNKAAVNLRVHV
Trigger: AACATGTACACGGAGGTTTACAGCAGCTTTATTCTTAATCAACAAACACTGGAAACAACGCAGATATCCTTCAGCAGATGACCTGTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS GCA 72 bp AAGACAGACTTACCTTCATCCTTGAACATATGTTTCTaGTGCTGGCACCTCTTAACCCAAAACTTTTATACC +
Preference number: 6 (lower is better)
Translates to: KTDLPSSLNICF*CWHLLTQNFYT
Trigger: GGTATAAAAGTTTTGGGTTAAGAGGTGCCAGCAGCAGAAACATATGTTCAAGGATGAAGGTAAGTCTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CCA 72 bp TTACAGAAGTTCCCAAACAGTGCTAGTTCCATTGTTTaGAGCTCAGGGTCAGTCAAACCTAATAAAAGTACA +
Preference number: 6 (lower is better)
Translates to: LQKFPNSASSIV*SSGSVKPNKST
Trigger: TGTACTTTTATTAGGTTTGACTGACCCTGAGCTCCAAACAATGGAACTAGCACTGTTTGGGAACTTCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398101.7
CDS CAA 72 bp ATTTCAAAAGTGAGCTGTGAAATGCTGAAATTAGAATaGGACGGAAGGTGGCAAGCAGTGAATTCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: ISKVSCEMLKLE*DGRWQAVNSQC
Trigger: ACACTGAGAATTCACTGCTTGCCACCTTCCGTCCAATTCTAATTTCAGCATTTCACAGCTCACTTTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476682.1
CDS CAA 72 bp AAGCACATCCACTCCACCTTTGCAGATGTAGAAGTCTaGTATCTGGCTTTTTATTTCAGTAGGGAAATCAGT +
Preference number: 6 (lower is better)
Translates to: KHIHSTFADVEV*YLAFYFSREIS
Trigger: ACTGATTTCCCTACTGAAATAAAAAGCCAGATACAAGACTTCTACATCTGCAAAGGTGGAGTGGATGTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 72 bp TCTGCTGAAGGATATCTGCGTTGTTTCCAGTGTTTGTaGATTAAGAATAAAGCTGCTGTAAACCTCCGTGTA +
Preference number: 6 (lower is better)
Translates to: SAEGYLRCFQCL*IKNKAAVNLRV
Trigger: TACACGGAGGTTTACAGCAGCTTTATTCTTAATCAACAAACACTGGAAACAACGCAGATATCCTTCAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS CAA 72 bp TCATCTGCTGAAGGATATCTGCGTTGTTTCCAGTGTTaGTTGATTAAGAATAAAGCTGCTGTAAACCTCCGT +
Preference number: 6 (lower is better)
Translates to: SSAEGYLRCFQC*LIKNKAAVNLR
Trigger: ACGGAGGTTTACAGCAGCTTTATTCTTAATCAACAAACACTGGAAACAACGCAGATATCCTTCAGCAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648300.1
CDS TCA 72 bp GGTCTTCAGGTCATTTCTTGCAAACCTCTCCAAGACTaGAAAATCCCATTTGTTCTTAAGAAAATGCTCACT +
Preference number: 6 (lower is better)
Translates to: GLQVISCKPLQD*KIPFVLKKMLT
Trigger: AGTGAGCATTTTCTTAAGAACAAATGGGATTTTTCAGTCTTGGAGAGGTTTGCAAGAAATGACCTGAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494830.1
CDS CAA 72 bp TTGCCTTTTATCTCTTCCTTTCAGCATCCTCTTACGTaGGTTGTATACATAATGTCCAGGGTTTTTAGTCAT +
Preference number: 6 (lower is better)
Translates to: LPFISSFQHPLT*VVYIMSRVFSH
Trigger: ATGACTAAAAACCCTGGACATTATGTATACAACCAACGTAAGAGGATGCTGAAAGGAAGAGATAAAAGGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648300.1