RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT5B (Homo sapiens)

Ensembl gene IDs: ENSG00000167889

Ensembl transcript IDs: ENST00000301618.8, ENST00000374998.3, ENST00000428789.6, ENST00000563153.5, ENST00000563627.1, ENST00000565043.5, ENST00000565675.1, ENST00000568598.1, ENST00000569840.7

Found 889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAGGAGGGCTCACAGATTAGCCCGTGGTCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGGCCAGCCAGGCCCGCAGGGCGTGCG +
Preference number: 1 (lower is better)
Translates to: RRRAHRLARGPGRCR*RPSQARPARPAGRA
Trigger: CGCACGCCCTGCGGGCCTGGCTGGCCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGCCCTCCTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 90 bp CCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTaGAGGAGCAGGCCTAGGCTGGTGGGTGGGGTTGCCTGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: PSTNSQHPGAASREG*RSRPRLVGGVAWRG
Trigger: CCCTCTCCAGGCAACCCCACCCACCAGCCTAGGCCTGCTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR GCA 90 bp GAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCC +
Preference number: 1 (lower is better)
Translates to: ERTGACLGGPRGSAC*LLLFPGTALLCQLP
Trigger: GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 90 bp GGGGGTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAGAGAGCCAGCGTGGGTGCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: GGCEEDKQPGLRTCW*FLPRQERASVGARQ
Trigger: CTGCCTGGCACCCACGCTGGCTCTCTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 90 bp CAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTT +
Preference number: 1 (lower is better)
Translates to: QERTGACLGGPRGSA*CLLLFPGTALLCQL
Trigger: AAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 90 bp TCCAGGGCCATGGGGAGGGCCCCTCCTTGGACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCTAGAGGC +
Preference number: 1 (lower is better)
Translates to: SRAMGRAPPWTLQGP*GSLVPVPLPCKSRG
Trigger: GCCTCTAGACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCCATGGCCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR TCA 90 bp GCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: ADSEQSDTCLATMLL*VPRREPEPAWEVPG
Trigger: CCCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 90 bp ACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATCCTGGGCCCAAGAACGACTGGGCCC +
Preference number: 1 (lower is better)
Translates to: TLQGPWGSLVPVPLP*KSRGPILGPRTTGP
Trigger: GGGCCCAGTCGTTCTTGGGCCCAGGATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 90 bp TGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: WAMRTLSSPTPAWPR*FCESPGENRSLPGR
Trigger: CCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: TCSWAMRTLSSPTPA*PRCFCESPGENRSL
Trigger: CAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 90 bp CTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGACTGCAGGAAGATGCAACCATTGGCG +
Preference number: 1 (lower is better)
Translates to: LEVGLPRKNSWLREL*GGLKRDCRKMQPLA
Trigger: CGCCAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 90 bp TGGGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGCGGGCTGAAGCGGGACTGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: WENTSLEVGLPRKNS*LRELWGGLKRDCRK
Trigger: CTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR GCA 90 bp AGGCAGGGGTCCCAGAGCCTGATCTCTGAGGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCCAC +
Preference number: 1 (lower is better)
Translates to: RQGSQSLISEAGLET*PLEGVGIEALEQIH
Trigger: GTGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGGGACCCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR TCA 90 bp GTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAAGGAGATaGCGGACAGCACCCCGGATGGAGTGGCAGGTGCCACCGCTCCCC +
Preference number: 1 (lower is better)
Translates to: VPQCGPNLLQIHKRR*RTAPRMEWQVPPLP
Trigger: GGGGAGCGGTGGCACCTGCCACTCCATCCGGGGTGCTGTCCGTCATCTCCTTTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
3UTR CCA 90 bp GAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGAGGGTGGGGGAATCGGGAAATCGGG +
Preference number: 1 (lower is better)
Translates to: ETIQPGSGWSLHPQL*SSSVEGGWGNREIG
Trigger: CCCGATTTCCCGATTCCCCCACCCTCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR GCA 90 bp GGATTGAGGCTTTGGAACAAATCCACCACCTGGAGTTGCAGGTCATaGCAGGATGGGTTTTGGGAGAAGCCCAGAGTGAAAAGGGTTGGA +
Preference number: 1 (lower is better)
Translates to: GLRLWNKSTTWSCRS*QDGFWEKPRVKRVG
Trigger: TCCAACCCTTTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTTCCAAAGCCTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CCA 90 bp AACAAATCCACCACCTGGAGTTGCAGGTCATGCCAGGATGGGTTTTaGGAGAAGCCCAGAGTGAAAAGGGTTGGAACAAGCAGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: NKSTTWSCRSCQDGF*EKPRVKRVGTSRRE
Trigger: CTCTCTCCTGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CCA 90 bp GCTTTGGAACAAATCCACCACCTGGAGTTGCAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAGAGTGAAAAGGGTTGGAACAAGCAG +
Preference number: 1 (lower is better)
Translates to: ALEQIHHLELQVMPG*VLGEAQSEKGWNKQ
Trigger: CTGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTTCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR TCA 90 bp TACCTGAGTTCTCATAATGGCCTTGATGGCTGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGTCCACACGTGGGGCTTGCCGATGAA +
Preference number: 1 (lower is better)
Translates to: YLSSHNGLDGCFKLL*VVVVDCPHVGLADE
Trigger: TTCATCGGCAAGCCCCACGTGTGGACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAACTCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAAGGCCTGACCCGCTaGGGCAGGCGGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEEGLTR*GRRGSG
Trigger: CCCAGAGCCCCGCCTGCCTCAGCGGGTCAGGCCTTC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGGAAAGGGGGCATCCTaGGGCAGGCGTGCCACTCGG +
Preference number: 2 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEGKGAS*GRRATR
Trigger: CCGAGTGGCACGCCTGCCCCAGGATGCCCCCTTTCC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGGAAAGGGGGCATCCTaGGGCAGGCGTGCCACTCGG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEGKGAS*GRRATR
Trigger: CCGAGTGGCACGCCTGCCCCAGGATGCCCCCTTTCC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGGGCTCTGCGGGGCGTaGGCCTCTGGTAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSGLCGA*ASGRAG
Trigger: CCCTGCCCTACCAGAGGCCCACGCCCCGCAGAGCCC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 2 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTGGGTGGCAGTGTTCTaGAGGCCTGACCCGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEWVAVF*RPDPLR
Trigger: CCTCAGCGGGTCAGGCCTTCAGAACACTGCCACCCA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGG +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSPGRCR*RPSQAR
Trigger: CCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGAACCGGAGCCTGCCTaGGAGGTCCCAGGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVEPEPA*EVPGAR
Trigger: CCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGGGCCCAAGAACGACTaGGCCCCTTTCGCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPGPKND*APFATW
Trigger: CCAGGTGGCGAAAGGGGCCCAGTCGTTCTTGGGCCC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 2 (lower is better)
Translates to: LLARLGERRVQVVHLRLGGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 2 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTGGCACAAGGCCACCTaGCCCTTGCGGAAGTCGCGG +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPWHKAT*PLRKSR
Trigger: CCGCGACTTCCGCAAGGGCCAGGTGGCCTTGTGCCA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGATCCAGAGGCGGTTTaGGGCTGGAGGAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEDPEAV*GWRKLE
Trigger: CTCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVELRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 2 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 2 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 2 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTCCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGA +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPPMGPV*LAPLTG
Trigger: TCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGG...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 2 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPDRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR TCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGAGCTGTGGGGCGGGCTaGAGCGGGACTGCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKSCGAG*SGTAGR
Trigger: TCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCT...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGAAGAACTCGTGGTTaGGGGAGCTGTGGGGCGGGC +
Preference number: 2 (lower is better)
Translates to: DASVSPQERTGACLGGPRGRTRG*GSCGAG
Trigger: GCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTLRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 2 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKRGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGCCCAGATCCGGCCTTaGACAAAGCCAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPAQIRP*TKPGAS
Trigger: GGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGGGCCCAAGAACGACTaGGCCCCTTTCGCCACCTGG +
Preference number: 2 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVGPKND*APFATW
Trigger: CCAGGTGGCGAAAGGGGCCCAGTCGTTCTTGGGCCC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPDRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: LLARLGERRVQVVHLRLGTLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTGGGCCCTGTGTGCCTaGCTCCCCTCACAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPWALCA*LPSQEK
Trigger: CTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGAGTGTAGAGGGAGGGTaGGGGAATCGGGAAATCGGG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVESVEGG*GNREIG
Trigger: CCCGATTTCCCGATTCCCCCACCCTCCCTCTACACT...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTAGGGCAACTGGAAACTaGGCAGGGCGTACCATGGGG +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPRATGN*AGRTMG
Trigger: CCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCT...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCCCCAGGAGCCAAGCTaGTGTTCCGAGCCCACTCGA +
Preference number: 2 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPPQEPS*CSEPTR
Trigger: TCGAGTGGGCTCGGAACACCAGCTTGGCTCCTGGGG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCACTCCTGGCCAGGCTaGGCGAACGCCGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAHSWPG*ANAGYR
Trigger: CCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGCGTACCATGGGGCTaGGGGTCCATCCCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGGVPWG*GSIPSP
Trigger: AGGGCTTGGGATGGACCCTCAGCCCCATGGTACGCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGAGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GEHLSGGGLASEELVVEGESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 2 (lower is better)
Translates to: DASVSPQERTGACLGGPRPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRARGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 2 (lower is better)
Translates to: WGRRATRRRTARSRGGLRPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGCCCAGATCCGGCCTTaGACAAAGCCAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PAWPRCFCESPGENRSLPAQIRP*TKPGAS
Trigger: GGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPAGLET*PLEGVG
Trigger: CCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 2 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 2 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCGACCACCTGCTCCTaGGCCATGCGGACTCTGAGC +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPTTCS*AMRTLS
Trigger: GCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPTLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSTLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: PAWPRCFCESPGENRSLPHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCAACCAGGGTCTGGGTaGTCCCTACACCCCCAACTG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPQPGSG*SLHPQL
Trigger: CAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEQVMPG*VLGEAQ
Trigger: CTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 2 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCGTGGGGCTTGCCGATaGAGTTCTCCGCGTAGGGAT +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSRGACR*SSPRRD
Trigger: ATCCCTACGCGGAGAACTTCATCGGCAAGCCCCACG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGARGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 2 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGA +
Preference number: 2 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPMGPV*LAPLTG
Trigger: TCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGATCCTGGGGCAGGCGTaGCACTCGGAGAAGGACAGC +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAILGQA*HSEKDS
Trigger: GCTGTCCTTCTCCGAGTGGCACGCCTGCCCCAGGAT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTCATCTCCGACTCGGTaGTGTCACAGGGCACCTGCA +
Preference number: 2 (lower is better)
Translates to: SACCLLLFPGTALLCQLPSSPTR*CHRAPA
Trigger: TGCAGGTGCCCTGTGACAGCACCGAGTCGGAGATGA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTGGGCCCTGTGTGCCTaGCTCCCCTCACAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: PAWPRCFCESPGENRSLPWALCA*LPSQEK
Trigger: CTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAACCAGGGTCTGGGTaGTCCCTACACCCCCAACTG +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSQPGSG*SLHPQL
Trigger: CAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKPRKNS*LRELWG
Trigger: GCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCATTCACAGACAGCCCTaGCACAAGGCCACCTGGCCC +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPIHRQP*HKATWP
Trigger: GGGCCAGGTGGCCTTGTGCCAGGGCTGTCTGTGAAT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR TCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCCAGAGCCTGATCTCTaGGGCTGGACTGGAAACCTG +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSPEPDL*GWTGNL
Trigger: CAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGCCCAGATCCGGCCTTaGACAAAGCCAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RATRRRTARSRGGLRLEEAQIRP*TKPGAS
Trigger: GGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCTCCACCACCTGGAGTTaGAGGTCATGCCAGGATGGG +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPSTTWS*RSCQDG
Trigger: CCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGA...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGGACTGCAGGAAGATaGAACCATTGGCGATGGCCT +
Preference number: 2 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGTAGR*NHWRWP
Trigger: AGGCCATCGCCAATGGTTGCATCTTCCTGCAGTCCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGAACCGGAGCCTGCCTaGGAGGTCCCAGGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: GLETCPLEGVGIEALEQIEPEPA*EVPGAR
Trigger: CCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPSPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGATGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGAC +
Preference number: 2 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGWLREL*GGLKRD
Trigger: GTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCA...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTACACCTCTCTGGAGGTaGGCTTGCCTCGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: LLARLGERRVQVVHLRLGTPLWR*ACLGRT
Trigger: AGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGT...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGGGAGAACACCTCTCTaGAGGTGGGCTTGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAGRTPL*RWACLG
Trigger: TCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTG +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPSQISP*SRQVSV
Trigger: CACCGACACCTGCCTGGACCACGGGCTAATCTGTGA...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR TCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 2 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: RATRRRTARSRGGLRLEEAGLET*PLEGVG
Trigger: CCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGGGCTGAAGCGGGACTaGAGGAAGATGCAACCATTG +
Preference number: 2 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAGLKRD*RKMQPL
Trigger: CAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCTCTGGAGGTGGGCTTaGCTCGGAAGAACTCGTGGT +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRLWRWA*LGRTRG
Trigger: ACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 2 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCATCCCAAACACCAATaGGCCCTGTGTGCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: WGRRATRRRTARSRGGLRHPKHQ*ALCAWL
Trigger: GAGCCAGGCACACAGGGCCCATTGGTGTTTGGGATG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCAGTGTAGAGGGAGGGTaGGGGAATCGGGAAATCGGG +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRSVEGG*GNREIG
Trigger: CCCGATTTCCCGATTCCCCCACCCTCCCTCTACACT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCAGCACCTGCGGAAGTaGCTAGTGCATGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAQHLRK*LVHEGH
Trigger: GTGGCCTTCATGCACTAGCCACTTCCGCAGGTGCTG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGGGAGAAGCCCAGAGTaGAAAGGGTTGGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPGRSPE*KGLEQA
Trigger: TGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGSPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PRCFCESPGENRSLPGRSLHPQL*SSSVEG
Trigger: TCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 2 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGGAGAAGCCCAGAGTaGAAAGGGTTGGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGRSPE*KGLEQA
Trigger: TGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 2 (lower is better)
Translates to: LGHDASVSPQERTGACLGGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 2 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTGGAGTTGCAGGTCATaGCAGGATGGGTTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRWSCRS*QDGFWE
Trigger: CTCCCAAAACCCATCCTGGCATGACCTGCAACTCCA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: WGRRATRRRTARSRGGLRLHPQL*SSSVEG
Trigger: TCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTCAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAQVMPG*VLGEAQ
Trigger: CTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTG...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAAGTGGACAGGGCAACTaGAAACTGGGCAGGGCGTAC +
Preference number: 2 (lower is better)
Translates to: RATRRRTARSRGGLRLEESGQGN*KLGRAY
Trigger: GTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CAA 90 bp GCTGGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTaGGAACAAATCCACCACCTGGAGTTGCAGGTCATGCCAGGATGG +
Preference number: 2 (lower is better)
Translates to: AGLETCPLEGVGIEA*EQIHHLELQVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTTGGAGTTGCAGGTCATaGCAGGATGGGTTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAWSCRS*QDGFWE
Trigger: CTCCCAAAACCCATCCTGGCATGACCTGCAACTCCA...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGTGCCAGGATGGGTTTTaGGAGAAGCCCAGAGTGAAA +
Preference number: 2 (lower is better)
Translates to: WGRRATRRRTARSRGGLRCQDGF*EKPRVK
Trigger: TTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCA...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTAACAAATCCACCACCTaGAGTTGCAGGTCATGCCAG +
Preference number: 2 (lower is better)
Translates to: PAWPRCFCESPGENRSLPNKSTT*SCRSCQ
Trigger: CTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAACAAATCCACCACCTaGAGTTGCAGGTCATGCCAG +
Preference number: 2 (lower is better)
Translates to: WGRRATRRRTARSRGGLRNKSTT*SCRSCQ
Trigger: CTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp AGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACGCACCCCGGATGGAGTaGCAGGTGCCACCGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RNALWAVPQCGPNLLQIHAPRME*QVPPLP
Trigger: GGGGAGCGGTGGCACCTGCCACTCCATCCGGGGTGC...GTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
3UTR-3UTR TCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 2 (lower is better)
Translates to: RATRRRTARSRGGLRLEEGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: GLETCPLEGVGIEALEQIEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR GCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAGTGCCACCGCTCCCCTaGTCCGTGTGCCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKVPPLP*SVCLLP
Trigger: GGGGAGGAGGCACACGGAGCAGGGGAGCGGTGGCAC...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
3UTR-3UTR GCA 90 bp AGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACGGATGGAGTGGCAGGTaGCACCGCTCCCCTGCTCCG +
Preference number: 2 (lower is better)
Translates to: RNALWAVPQCGPNLLQIHGWSGR*HRSPAP
Trigger: CGGAGCAGGGGAGCGGTGGCACCTGCCACTCCATCC...GTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
3UTR-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAAACAAATCCACCACCTaGAGTTGCAGGTCATGCCAG +
Preference number: 2 (lower is better)
Translates to: RATRRRTARSRGGLRLEENKSTT*SCRSCQ
Trigger: CTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAGGACAGCACCCCGGATaGAGTGGCAGGTGCCACCGC +
Preference number: 2 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKGQHPG*SGRCHR
Trigger: GCGGTGGCACCTGCCACTCCATCCGGGGTGCTGTCC...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
3UTR CAA 90 bp GAACAAATCCACCACCTGGAGTTGCAGGTCATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAAAAGGGTTGGAACAAGCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: EQIHHLELQVMPGWV*GEAQSEKGWNKQER
Trigger: TCTCTCCTGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR GCA 72 bp ACCGGAGCCTGCCTGGGAGGTCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: TGACLGGPRGSA*CLLLFPGTALL
Trigger: GAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 72 bp GCTCACAGATTAGCCCGTGGTCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGGCCAGCCAGGCCCGCA +
Preference number: 3 (lower is better)
Translates to: AHRLARGPGRCR*RPSQARPARPA
Trigger: TGCGGGCCTGGCTGGCCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 72 bp GCTGGTGCTTTCTCCCGCGGCAGGAGAGAGCCAGCGTaGGTGCCAGGCAGGGCGGCAGAGGCGGATTCACAG +
Preference number: 3 (lower is better)
Translates to: AGAFSRGRREPA*VPGRAAEADSQ
Trigger: CTGTGAATCCGCCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTCTCCTGCCGCGGGAGAAAGCACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 3 (lower is better)
Translates to: PRCFCESPGENRSLPGRSGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 72 bp GTGCTTTCTCCCGCGGCAGGAGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGGCGGATTCACAGACAG +
Preference number: 3 (lower is better)
Translates to: VLSPAAGESQRG*QAGRQRRIHRQ
Trigger: CTGTCTGTGAATCCGCCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTCTCCTGCCGCGGGAGAAAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 72 bp GAGCCAAGCTGGTGTTCCGAGCCCACTCGAGGTGGGTaGCATTGGGGGCCAGGACAAAGGGGCTCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: EPSWCSEPTRGG*HWGPGQRGSAG
Trigger: CCCCGCAGAGCCCCTTTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCGGAACACCAGCTTGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CAA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CAA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 3 (lower is better)
Translates to: WGRRATRRRTARSRGGLRGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CCA 72 bp ATGGGGAGGGCCCCTCCTTGGACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAG +
Preference number: 3 (lower is better)
Translates to: MGRAPPWTLQGP*GSLVPVPLPCK
Trigger: CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 72 bp CCAGGAGCCAAGCTGGTGTTCCGAGCCCACTCGAGGTaGGTGGCATTGGGGGCCAGGACAAAGGGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: PGAKLVFRAHSR*VALGARTKGLC
Trigger: GCAGAGCCCCTTTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCGGAACACCAGCTTGGCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 72 bp CACTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTaGTTCATCTCCGACTCGGTGCTGTCACAGGGCACC +
Preference number: 3 (lower is better)
Translates to: HSWPGWANAGYR*FISDSVLSQGT
Trigger: GGTGCCCTGTGACAGCACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CAA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGAGATCCAGAGGCGGTTaGAGGCTGGAGGAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: WPLHQLSASRGCLPGRVERSRGG*RLEEAG
Trigger: TCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATCT...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR TCA 72 bp GGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTTGGCCACGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: GLRPPAPGPCGL*AVRHLLGHDAS
Trigger: AGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 72 bp GAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAGAGAGCCAGCGTGGGT +
Preference number: 3 (lower is better)
Translates to: EEDKQPGLRTCW*FLPRQERASVG
Trigger: ACCCACGCTGGCTCTCTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 72 bp GGTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGGCAGGAGAGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: GCEEDKQPGLRT*WCFLPRQERAS
Trigger: GCTGGCTCTCTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR GCA 72 bp CCTCTGTCCACATCCCAAACACCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: PLSTSQTPMGPV*LAPLTGEGRAP
Trigger: GGGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGATGTGGACAGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 72 bp TGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAGGAGAGAGCCAGCGTG +
Preference number: 3 (lower is better)
Translates to: CEEDKQPGLRTC*CFLPRQERASV
Trigger: CACGCTGGCTCTCTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 72 bp CCCCTCCTTGGACCCTTCAGGGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTTGCAAGTCTAGAGGCC +
Preference number: 3 (lower is better)
Translates to: PLLGPFRDRGAA*SLFLSLASLEA
Trigger: GGCCTCTAGACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCAAGGAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 72 bp AGGAAGGGGAAGAAGGAGGGCTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTGCAGGCCCTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: RKGKKEGSQISP*SRQVSVQALPG
Trigger: GCCTGGGAGGGCCTGCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGCCCTCCTTCTTCCCCTTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCTGGAAACCTGCCCCTaGGAGGGGGTAGGGATTGAG +
Preference number: 3 (lower is better)
Translates to: SACCLLLFPGTALLCQLPLETCP*EGVGIE
Trigger: CTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGTCCACACGTGGGGCTaGCCGATGAAGTTCTCCGCG +
Preference number: 3 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPVHTWG*PMKFSA
Trigger: CGCGGAGAACTTCATCGGCAAGCCCCACGTGTGGAC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR TCA 72 bp GAGCAGTCCGACACCTGCTTGGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: EQSDTCLATMLL*VPRREPEPAWE
Trigger: CTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CAA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEMPGWV*GEAQSE
Trigger: TTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCAT...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 3 (lower is better)
Translates to: GLETCPLEGVGIEALEQIGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAAGGAAGATGCAACCATaGGCGATGGCCTCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: LGHDASVSPQERTGACLGRKMQP*AMASRG
Trigger: CCCCCTGGAGGCCATCGCCAATGGTTGCATCTTCCT...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR GCA 72 bp CGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: RTLSSPTPAWPR*FCESPGENRSL
Trigger: CAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR CCA 72 bp CAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGAGGGTGGGGGAATCGG +
Preference number: 3 (lower is better)
Translates to: QPGSGWSLHPQL*SSSVEGGWGNR
Trigger: CCGATTCCCCCACCCTCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CCA 72 bp GGCTTGCCTCGGAAGAACTCGTGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGACTGCAGGAAGATGCAA +
Preference number: 3 (lower is better)
Translates to: GLPRKNSWLREL*GGLKRDCRKMQ
Trigger: TTGCATCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGGCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR-3UTR CAA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCATCCACCACCTGGAGTaGCAGGTCATGCCAGGATGG +
Preference number: 3 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRIHHLE*QVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGAT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGAACCCGATGAAGAGTTaGGCCTTGCGCAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: LLGHDASVSPQERTGACLNPMKS*ALRSSC
Trigger: GCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTT...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR CCA 72 bp TGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAAC +
Preference number: 3 (lower is better)
Translates to: WAMRTLSSPTPA*PRCFCESPGEN
Trigger: GTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
3UTR-3UTR CAA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPMPGWV*GEAQSE
Trigger: TTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCAT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRMPGWV*GEAQSE
Trigger: TTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCAT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAATCCACCACCTGGAGTaGCAGGTCATGCCAGGATGG +
Preference number: 3 (lower is better)
Translates to: RATRRRTARSRGGLRLEEIHHLE*QVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGAT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGTTCTCATAATGGCCTaGATGGCTGCTTCAAACTCC +
Preference number: 3 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAVLIMA*MAASNS
Trigger: GGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAAC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
3UTR GCA 72 bp TCCCAGAGCCTGATCTCTGAGGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: SQSLISEAGLET*PLEGVGIEALE
Trigger: TTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR TCA 72 bp TGGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCACCACCTGGAGTTGCA +
Preference number: 3 (lower is better)
Translates to: WTGNLPLGGGRD*GFGTNPPPGVA
Trigger: TGCAACTCCAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR GCA 72 bp GGATTGAGGCTTTGGAACAAATCCACCACCTGGAGTTaGAGGTCATGCCAGGATGGGTTTTGGGAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: GLRLWNKSTTWS*RSCQDGFWEKP
Trigger: GGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTTCCAAAGCCTCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CCA 72 bp CAAATCCACCACCTGGAGTTGCAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAGAGTGAAAAGGGTTGG +
Preference number: 3 (lower is better)
Translates to: QIHHLELQVMPG*VLGEAQSEKGW
Trigger: CCAACCCTTTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR TCA 72 bp TCTCATAATGGCCTTGATGGCTGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGTCCACACGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: SHNGLDGCFKLL*VVVVDCPHVGL
Trigger: AAGCCCCACGTGTGGACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCAGCCATCAAGGCCATTATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGGGCTCTGCGGGGCGTaGGCCTCTGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEGLCGA*ASGRAG
Trigger: CCCTGCCCTACCAGAGGCCCACGCCCCGCAGAGCCC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCCTGGATCCGCTCCATaGGGCCGGCCCCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTPGSAP*GRPQGA
Trigger: TGCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGCCGCGCCGCGCCCATaGCTCTCGACGAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTAAPRP*LSTRAT
Trigger: GGTTGCCCTCGTCGAGAGCCATGGGCGCGGCGCGGC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCCGGACGCACCGTCCTaGGCCCAGCTCTCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRPDAPS*AQLSPR
Trigger: ACGCGGCGAGAGCTGGGCCCAGGACGGTGCGTCCGG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCCCCGCTTCACATTTTaGGGACCGGGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEPRFTF*GPGGGA
Trigger: CGCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGGCTCTGCGGGGCGTaGGCCTCTGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGLCGA*ASGRAG
Trigger: CCCTGCCCTACCAGAGGCCCACGCCCCGCAGAGCCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGCCTCCCGGGAAGGGTaGAGGAGCAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEASREG*RSRPRL
Trigger: CAGCCTAGGCCTGCTCCTCCACCCTTCCCGGGAGGC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGCGCCCACTGGGCTGTaGGCCTCTTGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEAPTGL*ASWSAS
Trigger: AGAAGCGGACCAAGAGGCTCACAGCCCAGTGGGCGC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGAAGGCCTGACCCGCTaGGGCAGGCGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKEGLTR*GRRGSG
Trigger: CCCAGAGCCCCGCCTGCCTCAGCGGGTCAGGCCTTC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGAAGGCCTGACCCGCTaGGGCAGGCGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPREGLTR*GRRGSG
Trigger: CCCAGAGCCCCGCCTGCCTCAGCGGGTCAGGCCTTC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGCCCGGTGGCCTCGCTaGTCAGGCCTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVARWPR*SGLGVQ
Trigger: CTGCACGCCCAGGCCTGAGCAGCGAGGCCACCGGGC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPSPPAR*SSLLFS
Trigger: GGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCTGTCTGCGGGAAAGTaGAGGTCGCCGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPLSAGK*RSPPAR
Trigger: CCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCTTGGGGTCACTGGGTaGCTCACACTGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEELGVTG*LTLVPP
Trigger: CGGCGGGACCAGTGTGAGGCACCCAGTGACCCCAAG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGACGCACCGTCCTaGGCCCAGCTCTCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAPDAPS*AQLSPR
Trigger: ACGCGGCGAGAGCTGGGCCCAGGACGGTGCGTCCGG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCGCCGGGCCGAGAACTaGCCTCCCAGAGACGTCATC +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVERRAEN*PPRDVI
Trigger: GATGACGTCTCTGGGAGGCCAGTTCTCGGCCCGGCG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTGTGCGGATGGTGAATaGCGAGTCCCCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVECADGE*RVPQAP
Trigger: CGGCGCCTGGGGGACTCGCCATTCACCATCCGCACA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCACTCCTGGCCAGGCTaGGCGAACGCCGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRHSWPG*ANAGYR
Trigger: CCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTCACTCCTGGCCAGGCTaGGCGAACGCCGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPHSWPG*ANAGYR
Trigger: CCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGAGAGCCGGCGGTACTTaGTGTTGGAGCCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEERAGGT*CWSRRS
Trigger: GCTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCT...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCCGACCACCTGCTCCTaGGCCATGCGGACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEPTTCS*AMRTLS
Trigger: GCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGAAAGGGGGCATCCTaGGGCAGGCGTGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGKGAS*GRRATR
Trigger: CCGAGTGGCACGCCTGCCCCAGGATGCCCCCTTTCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGAAAGGGGGCATCCTaGGGCAGGCGTGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRGKGAS*GRRATR
Trigger: CCGAGTGGCACGCCTGCCCCAGGATGCCCCCTTTCC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCCTCCCGGGAAGGGTaGAGGAGCAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPASREG*RSRPRL
Trigger: CAGCCTAGGCCTGCTCCTCCACCCTTCCCGGGAGGC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCTGGATCCGCTCCATaGGGCCGGCCCCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPGSAP*GRPQGA
Trigger: TGCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCTGGATCCGCTCCATaGGGCCGGCCCCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPGSAP*GRPQGA
Trigger: TGCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGAAGAACTCGTGGTTaGGGGAGCTGTGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGRTRG*GSCGAG
Trigger: GCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTGGAGCCGGCGCAGCTaGAGAGCAGAGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEWSRRS*RAEAPS
Trigger: AGAAGGAGCCTCTGCTCTTCAGCTGCGCCGGCTCCA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGCGTACCATGGGGCTaGGGGTCCATCCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGVPWG*GSIPSP
Trigger: AGGGCTTGGGATGGACCCTCAGCCCCATGGTACGCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGAAGGCCTGACCCGCTaGGGCAGGCGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLREGLTR*GRRGSG
Trigger: CCCAGAGCCCCGCCTGCCTCAGCGGGTCAGGCCTTC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTGGGTGGCAGTGTTCTaGAGGCCTGACCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEWVAVF*RPDPLR
Trigger: CCTCAGCGGGTCAGGCCTTCAGAACACTGCCACCCA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEPGAAH*CSPAWP
Trigger: TGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCTGTCTGCGGGAAAGTaGAGGTCGCCGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRALSAGK*RSPPAR
Trigger: CCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGGGGAGGGGCTTGGGTaGCCTCTGGGCAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPGEGLG*PLGSRL
Trigger: CAGACGGCTGCCCAGAGGGCACCCAAGCCCCTCCCC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGGGAGGGGCTTGGGTaGCCTCTGGGCAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGEGLG*PLGSRL
Trigger: CAGACGGCTGCCCAGAGGGCACCCAAGCCCCTCCCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGGCCCCCAGCTTCTGTaGCAGGCGCTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPGPQLL*QALGSQ
Trigger: CTGGCTGCCCAGCGCCTGGCACAGAAGCTGGGGGCC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGCCCCCAGCTTCTGTaGCAGGCGCTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGPQLL*QALGSQ
Trigger: CTGGCTGCCCAGCGCCTGGCACAGAAGCTGGGGGCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRPGRCR*RPSQAR
Trigger: CCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPPGRCR*RPSQAR
Trigger: CCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGCCGCGCCGCGCCCATaGCTCTCGACGAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAAAPRP*LSTRAT
Trigger: GGTTGCCCTCGTCGAGAGCCATGGGCGCGGCGCGGC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCTGGGTGCCTCACACTaGTCCCGCCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRLGASH*SRRPSD
Trigger: GTCAGAAGGCCGGCGGGACCAGTGTGAGGCACCCAG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTTCTGTGCCAGGCGCTaGGCAGCCAGCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPFCARR*AASAHW
Trigger: CCAGTGGGCGCTGGCTGCCCAGCGCCTGGCACAGAA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGGCTCTGCGGGGCGTaGGCCTCTGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLGLCGA*ASGRAG
Trigger: CCCTGCCCTACCAGAGGCCCACGCCCCGCAGAGCCC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGGCTCTGCGGGGCGTaGGCCTCTGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGLCGA*ASGRAG
Trigger: CCCTGCCCTACCAGAGGCCCACGCCCCGCAGAGCCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCCCCAGGAGCCAAGCTaGTGTTCCGAGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEPQEPS*CSEPTR
Trigger: TCGAGTGGGCTCGGAACACCAGCTTGGCTCCTGGGG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGTGGCACAAGGCCACCTaGCCCTTGCGGAAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRWHKAT*PLRKSR
Trigger: CCGCGACTTCCGCAAGGGCCAGGTGGCCTTGTGCCA...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGAACCGGAGCCTGCCTaGGAGGTCCCAGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKEPEPA*EVPGAR
Trigger: CCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGAACCGGAGCCTGCCTaGGAGGTCCCAGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAEPEPA*EVPGAR
Trigger: CCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVETLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCAGGCCTAGGCTGGTaGGTGGGGTTGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPAGLGW*VGLPGE
Trigger: CTCTCCAGGCAACCCCACCCACCAGCCTAGGCCTGC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGGGGCCAGCCAGGTCTaGAGGGGACTCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPGASQV*RGLPQE
Trigger: TTCCTGTGGGAGTCCCCTCCAGACCTGGCTGGCCCC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGCGCCCACTGGGCTGTaGGCCTCTTGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPAPTGL*ASWSAS
Trigger: AGAAGCGGACCAAGAGGCTCACAGCCCAGTGGGCGC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTAGCTGTGGGGCGGGCTaGAGCGGGACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGSCGAG*SGTAGR
Trigger: TCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCT...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR TCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAGCTGTGGGGCGGGCTaGAGCGGGACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPSCGAG*SGTAGR
Trigger: TCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCGTGGGGCTTGCCGATaGAGTTCTCCGCGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEERGACR*SSPRRD
Trigger: ATCCCTACGCGGAGAACTTCATCGGCAAGCCCCACG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGGAGCCGGCGCAGCTaGAGAGCAGAGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTWSRRS*RAEAPS
Trigger: AGAAGGAGCCTCTGCTCTTCAGCTGCGCCGGCTCCA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTGGAGCCGGCGCAGCTaGAGAGCAGAGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPWSRRS*RAEAPS
Trigger: AGAAGGAGCCTCTGCTCTTCAGCTGCGCCGGCTCCA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTAGGGGTCCCAGAGCCTaGTCTCTGAGGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPRGPRA*SLRLDW
Trigger: CCAGTCCAGCCTCAGAGATCAGGCTCTGGGACCCCT...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCGTACCATGGGGCTaGGGGTCCATCCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPGVPWG*GSIPSP
Trigger: AGGGCTTGGGATGGACCCTCAGCCCCATGGTACGCC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGGGTGGCAGTGTTCTaGAGGCCTGACCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTWVAVF*RPDPLR
Trigger: CCTCAGCGGGTCAGGCCTTCAGAACACTGCCACCCA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGGGCCACGAACCCTCTaGGGGCCGAAGCCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAGPRTL*GPKPRP
Trigger: CGGACGCGGCTTCGGCCCGCAGAGGGTTCGTGGCCC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGCAGGTCGCTCATCTTaGGCAGGACGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPAGRSS*AGRRGT
Trigger: AGTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCTGTCTGCGGGAAAGTaGAGGTCGCCGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALSAGK*RSPPAR
Trigger: CCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTAGGGGGCATCCTGTCTaGGGGAAAGTGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPRGHPV*GKVQVA
Trigger: GGCGACCTGCACTTTCCCGCAGACAGGATGCCCCCT...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTCTTGGGGTCACTGGGTaGCTCACACTGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGLGVTG*LTLVPP
Trigger: CGGCGGGACCAGTGTGAGGCACCCAGTGACCCCAAG...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGGAAGGAGCACTCGGTaGCGTCCACCCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEGRSTR*RPPQRR
Trigger: CCTTCTTTGGGGTGGACGGCACCGAGTGCTCCTTCC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGCCCCCAGCTTCTGTaGCAGGCGCTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGPQLL*QALGSQ
Trigger: CTGGCTGCCCAGCGCCTGGCACAGAAGCTGGGGGCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGCCCCCAGCTTCTGTaGCAGGCGCTGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPGPQLL*QALGSQ
Trigger: CTGGCTGCCCAGCGCCTGGCACAGAAGCTGGGGGCC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAGGACAAAGGGGCTCTaGGGGGCGTGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPRTKGL*GAWASG
Trigger: ACCAGAGGCCCACGCCCCGCAGAGCCCCTTTGTCCT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPGRCR*RPSQAR
Trigger: CCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEELRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGCCCAGATCCGGCCTTaGACAAAGCCAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPAQIRP*TKPGAS
Trigger: GGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGATCCTGGGGCAGGCGTaGCACTCGGAGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRILGQA*HSEKDS
Trigger: GCTGTCCTTCTCCGAGTGGCACGCCTGCCCCAGGAT...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCGTGGTTTCTGTGGCTaGAGGGGCCAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRRGFCG*RGQPGL
Trigger: CAGACCTGGCTGGCCCCTGCAGCCACAGAAACCACG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCAGGAAGGGCCATCGTaGCCTGACGCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRQEGPS*PDAPPR
Trigger: ACGTGGTGGAGCGTCAGGGCACGATGGCCCTTCCTG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428789.6
ENST00000565043.5
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCTCGCTGCTCAGGCCTaGGCGTGCAGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALAAQA*ACSGGS
Trigger: GCTCCCTCCGCTGCACGCCCAGGCCTGAGCAGCGAG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTCGCTGCTCAGGCCTaGGCGTGCAGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRLAAQA*ACSGGS
Trigger: GCTCCCTCCGCTGCACGCCCAGGCCTGAGCAGCGAG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEECCSPA*PVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTCTGGGTGCCTCACACTaGTCCCGCCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGLGASH*SRRPSD
Trigger: GTCAGAAGGCCGGCGGGACCAGTGTGAGGCACCCAG...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGGAACTTGGGGTCACTaGGTGCCTCACACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEGTWGH*VPHTGP
Trigger: GGGACCAGTGTGAGGCACCCAGTGACCCCAAGTTCC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGCTTGGGTGCCCTCTaGGCAGCCGTCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGLGAL*AAVWFL
Trigger: GAGGAACCAGACGGCTGCCCAGAGGGCACCCAAGCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTGGCTTGGGTGCCCTCTaGGCAGCCGTCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGGLGAL*AAVWFL
Trigger: GAGGAACCAGACGGCTGCCCAGAGGGCACCCAAGCC...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCTTTGGGGAGGGGCTTaGGTGCCCTCTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSLWGGA*VPSGQP
Trigger: CGGCTGCCCAGAGGGCACCCAAGCCCCTCCCCAAAG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCCTTTGGGGAGGGGCTTaGGTGCCCTCTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVLWGGA*VPSGQP
Trigger: CGGCTGCCCAGAGGGCACCCAAGCCCCTCCCCAAAG...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCTTTGGGGAGGGGCTTaGGTGCCCTCTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRLWGGA*VPSGQP
Trigger: CGGCTGCCCAGAGGGCACCCAAGCCCCTCCCCAAAG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATTCTGTGCCAGGCGCTaGGCAGCCAGCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRFCARR*AASAHW
Trigger: CCAGTGGGCGCTGGCTGCCCAGCGCCTGGCACAGAA...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGACCAGGATCTGCTTCTaGTCCCTCTGGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRTRICF*SLWVAP
Trigger: GGGGGCCACCCAGAGGGACCAGAAGCAGATCCTGGT...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGGTAGCCGTGCAGCGTaGCGTACTCCTCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEGSRAA*RTPRGC
Trigger: ACAACCACGAGGAGTACGCCACGCTGCACGGCTACC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTCCAGTAGCCCCAGTTaGTCCGGTAGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTSSSPS*SGSRAA
Trigger: CGCTGCACGGCTACCGGACCAACTGGGGCTACTGGA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPWLREL*GGLKRD
Trigger: GTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCA...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTCCCACTCGAGGTGGGTaGCATTGGGGGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPPTRGG*HWGPGQ
Trigger: TTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGG...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCGAGCCCACTCGAGGTaGGTGGCATTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRAHSR*VALGAR
Trigger: CCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCAGAGCCGGCGGTACTTaGTGTTGGAGCCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPRAGGT*CWSRRS
Trigger: GCTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCT...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGAACCGGAGCCTGCCTaGGAGGTCCCAGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLEPEPA*EVPGAR
Trigger: CCGAGCCCCTGGGACCTCCCAGGCAGGCTCCGGTTC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGGGCCCTGTGTGCCTaGCTCCCCTCACAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTWALCA*LPSQEK
Trigger: CTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGAGGAAGCGTCCAGCCTaGCCCCTCCACCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEERKRPA*PLHQLS
Trigger: TGAGAGTTGGTGGAGGGGCCAGGCTGGACGCTTCCT...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGCGCCCACTGGGCTGTaGGCCTCTTGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPAPTGL*ASWSAS
Trigger: AGAAGCGGACCAAGAGGCTCACAGCCCAGTGGGCGC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGCGCCCACTGGGCTGTaGGCCTCTTGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRAPTGL*ASWSAS
Trigger: AGAAGCGGACCAAGAGGCTCACAGCCCAGTGGGCGC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCTCAGGACCCGAGGGCTaGACACGTCCCCGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVSGPEG*TRPRTP
Trigger: AGGAGTCCGGGGACGTGTTCAGCCCTCGGGTCCTGA...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAPSGRL*PAGHGP
Trigger: TGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVELRSSC*NSGCGK
Trigger: CTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAAGCTGTGGGGCGGGCTaGAGCGGGACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRSCGAG*SGTAGR
Trigger: TCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGCTGTGGGGCGGGCTaGAGCGGGACTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRSCGAG*SGTAGR
Trigger: TCTTCCTGCAGTCCCGCTTCAGCCCGCCCCACAGCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGATCCAGAGGCGGTTTaGGGCTGGAGGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPDPEAV*GWRKLE
Trigger: CTCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGATCCAGAGGCGGTTTaGGGCTGGAGGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRDPEAV*GWRKLE
Trigger: CTCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEWPVRP*ASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPPGAAH*CSPAWP
Trigger: TGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRASPPAR*SSLLFS
Trigger: GGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPSPPAR*SSLLFS
Trigger: GGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGAAGGAGCACTCGGTaGCGTCCACCCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRGRSTR*RPPQRR
Trigger: CCTTCTTTGGGGTGGACGGCACCGAGTGCTCCTTCC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGGACAAAGGGGCTCTaGGGGGCGTGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRTKGL*GAWASG
Trigger: ACCAGAGGCCCACGCCCCGCAGAGCCCCTTTGTCCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCAGGACAAAGGGGCTCTaGGGGGCGTGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVRTKGL*GAWASG
Trigger: ACCAGAGGCCCACGCCCCGCAGAGCCCCTTTGTCCT...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPRGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVRGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGGGCCTCCGACCACCTaGTCCTGGGCCATGCGGACT +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAGPPTT*SWAMRT
Trigger: AGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCCCGCTTCACATTTTaGGGACCGGGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPRFTF*GPGGGA
Trigger: CGCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGCCGGGCCGAGAACTaGCCTCCCAGAGACGTCATC +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRARRAEN*PPRDVI
Trigger: GATGACGTCTCTGGGAGGCCAGTTCTCGGCCCGGCG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGCCGGGCCGAGAACTaGCCTCCCAGAGACGTCATC +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPRRAEN*PPRDVI
Trigger: GATGACGTCTCTGGGAGGCCAGTTCTCGGCCCGGCG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCTGTGCGGATGGTGAATaGCGAGTCCCCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSCADGE*RVPQAP
Trigger: CGGCGCCTGGGGGACTCGCCATTCACCATCCGCACA...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTGTGCGGATGGTGAATaGCGAGTCCCCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKCADGE*RVPQAP
Trigger: CGGCGCCTGGGGGACTCGCCATTCACCATCCGCACA...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRCRSRL*RRIWST
Trigger: GGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCA...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGCTTGGGTGCCCTCTaGGCAGCCGTCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGLGAL*AAVWFL
Trigger: GAGGAACCAGACGGCTGCCCAGAGGGCACCCAAGCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCTTTGGGGAGGGGCTTaGGTGCCCTCTGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRLWGGA*VPSGQP
Trigger: CGGCTGCCCAGAGGGCACCCAAGCCCCTCCCCAAAG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGTTCTGTGCCAGGCGCTaGGCAGCCAGCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLFCARR*AASAHW
Trigger: CCAGTGGGCGCTGGCTGCCCAGCGCCTGGCACAGAA...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGTAGCCGTGCAGCGTaGCGTACTCCTCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGSRAA*RTPRGC
Trigger: ACAACCACGAGGAGTACGCCACGCTGCACGGCTACC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTTCCAGTAGCCCCAGTTaGTCCGGTAGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGSSSPS*SGSRAA
Trigger: CGCTGCACGGCTACCGGACCAACTGGGGCTACTGGA...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRWLREL*GGLKRD
Trigger: GTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCA...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCGAGCCCACTCGAGGTaGGTGGCATTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRARAHSR*VALGAR
Trigger: CCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACGAGCCCACTCGAGGTaGGTGGCATTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGRAHSR*VALGAR
Trigger: CCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEESQISP*SRQVSV
Trigger: CACCGACACCTGCCTGGACCACGGGCTAATCTGTGA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCACTCCTGGCCAGGCTaGGCGAACGCCGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPHSWPG*ANAGYR
Trigger: CCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCTGGCACAAGGCCACCTaGCCCTTGCGGAAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSWHKAT*PLRKSR
Trigger: CCGCGACTTCCGCAAGGGCCAGGTGGCCTTGTGCCA...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCATTCACAGACAGCCCTaGCACAAGGCCACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTIHRQP*HKATWP
Trigger: GGGCCAGGTGGCCTTGTGCCAGGGCTGTCTGTGAAT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGGGCCCAAGAACGACTaGGCCCCTTTCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSGPKND*APFATW
Trigger: CCAGGTGGCGAAAGGGGCCCAGTCGTTCTTGGGCCC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGGGCCCAAGAACGACTaGGCCCCTTTCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKGPKND*APFATW
Trigger: CCAGGTGGCGAAAGGGGCCCAGTCGTTCTTGGGCCC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTGGGCCCTGTGTGCCTaGCTCCCCTCACAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPWALCA*LPSQEK
Trigger: CTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCA...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCATCCCAAACACCAATaGGCCCTGTGTGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEHPKHQ*ALCAWL
Trigger: GAGCCAGGCACACAGGGCCCATTGGTGTTTGGGATG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCAGCACCTGCGGAAGTaGCTAGTGCATGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEQHLRK*LVHEGH
Trigger: GTGGCCTTCATGCACTAGCCACTTCCGCAGGTGCTG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGGAAAGGGGGCATCCTaGGGCAGGCGTGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRGKGAS*GRRATR
Trigger: CCGAGTGGCACGCCTGCCCCAGGATGCCCCCTTTCC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGCAGGCCTAGGCTGGTaGGTGGGGTTGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRAGLGW*VGLPGE
Trigger: CTCTCCAGGCAACCCCACCCACCAGCCTAGGCCTGC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGCAGGCCTAGGCTGGTaGGTGGGGTTGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRAGLGW*VGLPGE
Trigger: CTCTCCAGGCAACCCCACCCACCAGCCTAGGCCTGC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCCATCGTGGTTTCTGTaGCTGCAGGGGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPPSWFL*LQGPAR
Trigger: CCTGGCTGGCCCCTGCAGCCACAGAAACCACGATGG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTCAGGACCCGAGGGCTaGACACGTCCCCGGACTCCT +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRSGPEG*TRPRTP
Trigger: AGGAGTCCGGGGACGTGTTCAGCCCTCGGGTCCTGA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPSGRL*PAGHGP
Trigger: TGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPSGRL*PAGHGP
Trigger: TGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGAAGAACTCGTGGTTaGGGGAGCTGTGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGRTRG*GSCGAG
Trigger: GCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCTGGAGCCGGCGCAGCTaGAGAGCAGAGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSWSRRS*RAEAPS
Trigger: AGAAGGAGCCTCTGCTCTTCAGCTGCGCCGGCTCCA...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCCAGAGCCTGATCTCTaGGGCTGGACTGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTPEPDL*GWTGNL
Trigger: CAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCCAGAGCCTGATCTCTaGGGCTGGACTGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRPEPDL*GWTGNL
Trigger: CAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGCAGGTCGCTCATCTTaGGCAGGACGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLAGRSS*AGRRGT
Trigger: AGTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGCAGGTCGCTCATCTTaGGCAGGACGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAAGRSS*AGRRGT
Trigger: AGTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCAGGGGGCATCCTGTCTaGGGGAAAGTGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPRGHPV*GKVQVA
Trigger: GGCGACCTGCACTTTCCCGCAGACAGGATGCCCCCT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGGGGGCATCCTGTCTaGGGGAAAGTGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRGHPV*GKVQVA
Trigger: GGCGACCTGCACTTTCCCGCAGACAGGATGCCCCCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGTCTGACACCTTGCTGTaGAGGAGCAGACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRSDTLL*RSRLWR
Trigger: GCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGA...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCTTGGGGTCACTGGGTaGCTCACACTGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALGVTG*LTLVPP
Trigger: CGGCGGGACCAGTGTGAGGCACCCAGTGACCCCAAG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGAGGGGAGGGGCTTGGGTaGCCTCTGGGCAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGGEGLG*PLGSRL
Trigger: CAGACGGCTGCCCAGAGGGCACCCAAGCCCCTCCCC...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCAGAATGTCCGCCCACTaGACCATCTCCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPRMSAH*TISPRG
Trigger: GCCCCTAGGGGAGATGGTGCAGTGGGCGGACATTCT...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGCCCAGGACATAGAGTaGAGTCAGAATGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEAQDIE*SQNVRP
Trigger: TGGGCGGACATTCTGACTGCACTCTATGTCCTGGGC...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGGGACTGCAGGAAGATaGAACCATTGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEGTAGR*NHWRWP
Trigger: AGGCCATCGCCAATGGTTGCATCTTCCTGCAGTCCC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCTCTGGAGGTGGGCTTaGCTCGGAAGAACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRLWRWA*LGRTRG
Trigger: ACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTCATCTCCGACTCGGTaGTGTCACAGGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTSSPTR*CHRAPA
Trigger: TGCAGGTGCCCTGTGACAGCACCGAGTCGGAGATGA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGAGAGAGCCAGCGTGGGTaGCAGGCAGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGESQRG*QAGRQR
Trigger: CCTCTGCCGCCCTGCCTGGCACCCACGCTGGCTCTC...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTAGGGGCTCGGCATGCTaGCTCCTCCTATTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPRGSAC*LLLFPG
Trigger: GCCCGGGAATAGGAGGAGGCAGCATGCCGAGCCCCT...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCCCAGGGGCTCGGCATaGTGCCTCCTCCTATTCCCG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRPRGSA*CLLLFP
Trigger: CGGGAATAGGAGGAGGCAGCATGCCGAGCCCCTGGG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGCCCAGATCCGGCCTTaGACAAAGCCAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLAQIRP*TKPGAS
Trigger: GGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSPMGPV*LAPLTG
Trigger: TCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKPMGPV*LAPLTG
Trigger: TCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTCCACCACCTGGAGTTaGAGGTCATGCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPSTTWS*RSCQDG
Trigger: CCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRAGLET*PLEGVG
Trigger: CCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRAGLET*PLEGVG
Trigger: CCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGTGGTTTCTGTGGCTaGAGGGGCCAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRARGFCG*RGQPGL
Trigger: CAGACCTGGCTGGCCCCTGCAGCCACAGAAACCACG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTFWAIA*IRSMRP
Trigger: CGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCTGGGTGCCTCACACTaGTCCCGCCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALGASH*SRRPSD
Trigger: GTCAGAAGGCCGGCGGGACCAGTGTGAGGCACCCAG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCTGGGTGCCTCACACTaGTCCCGCCGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPLGASH*SRRPSD
Trigger: GTCAGAAGGCCGGCGGGACCAGTGTGAGGCACCCAG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTTTCTGTGCCAGGCGCTaGGCAGCCAGCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAFCARR*AASAHW
Trigger: CCAGTGGGCGCTGGCTGCCCAGCGCCTGGCACAGAA...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCACCAGGATCTGCTTCTaGTCCCTCTGGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRATRICF*SLWVAP
Trigger: GGGGGCCACCCAGAGGGACCAGAAGCAGATCCTGGT...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCACCAGGATCTGCTTCTaGTCCCTCTGGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSTRICF*SLWVAP
Trigger: GGGGGCCACCCAGAGGGACCAGAAGCAGATCCTGGT...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGTGGCGTACTCCTCGTaGTTGTACGCAGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRVAYSS*LYAGSV
Trigger: GACGGAACCTGCGTACAACCACGAGGAGTACGCCAC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGTAGCCGTGCAGCGTaGCGTACTCCTCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPGSRAA*RTPRGC
Trigger: ACAACCACGAGGAGTACGCCACGCTGCACGGCTACC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTGGTAGCCGTGCAGCGTaGCGTACTCCTCGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGGSRAA*RTPRGC
Trigger: ACAACCACGAGGAGTACGCCACGCTGCACGGCTACC...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTGGTTGAGGGAGCTGTaGGGCGGGCTGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPWLREL*GGLKRD
Trigger: GTCCCGCTTCAGCCCGCCCCACAGCTCCCTCAACCA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPPRKNS*LRELWG
Trigger: GCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCCCCAGGAGCCAAGCTaGTGTTCCGAGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKPQEPS*CSEPTR
Trigger: TCGAGTGGGCTCGGAACACCAGCTTGGCTCCTGGGG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCAACGCCGGGTACAGGTaGTTCATCTCCGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTNAGYR*FISDSV
Trigger: CACCGAGTCGGAGATGAACCACCTGTACCCGGCGTT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCAGAGCCGGCGGTACTTaGTGTTGGAGCCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRRAGGT*CWSRRS
Trigger: GCTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTGGCACAAGGCCACCTaGCCCTTGCGGAAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAWHKAT*PLRKSR
Trigger: CCGCGACTTCCGCAAGGGCCAGGTGGCCTTGTGCCA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVDRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRADRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRTLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGCACTCTCCAGGGCCATaGGGAGGGCCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLHSPGP*GGPLLG
Trigger: TCCAAGGAGGGGCCCTCCCCATGGCCCTGGAGAGTG...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTCATCCCAAACACCAATaGGCCCTGTGTGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPHPKHQ*ALCAWL
Trigger: GAGCCAGGCACACAGGGCCCATTGGTGTTTGGGATG...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGCATCCCAAACACCAATaGGCCCTGTGTGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRHPKHQ*ALCAWL
Trigger: GAGCCAGGCACACAGGGCCCATTGGTGTTTGGGATG...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCAACCAGGGTCTGGGTaGTCCCTACACCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPQPGSG*SLHPQL
Trigger: CAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCAGTGGACAGGGCAACTaGAAACTGGGCAGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTSGQGN*KLGRAY
Trigger: GTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAGGAAGCGTCCAGCCTaGCCCCTCCACCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPRKRPA*PLHQLS
Trigger: TGAGAGTTGGTGGAGGGGCCAGGCTGGACGCTTCCT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCATCGTGGTTTCTGTaGCTGCAGGGGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAPSWFL*LQGPAR
Trigger: CCTGGCTGGCCCCTGCAGCCACAGAAACCACGATGG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTGGTCCGCTTCTTCATaGAGATCAGGGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEWSASS*RSGTPS
Trigger: GGAAGGAGTCCCTGATCTTCATGAAGAAGCGGACCA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTGGTCCGCTTCTTCATaGAGATCAGGGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEWSASS*RSGTPS
Trigger: GGAAGGAGTCCCTGATCTTCATGAAGAAGCGGACCA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGTAGTCGGTGTAGATaGGGTCGAAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGSRCR*GRRAGA
Trigger: TGCCCCTGCCCTTCGACCTCATCTACACCGACTACC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGCTTCTCCGTCTCGTTaGGCTCCTCGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRASPSR*APRTRS
Trigger: GCTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCGTGGGGCTTGCCGATaGAGTTCTCCGCGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRGACR*SSPRRD
Trigger: ATCCCTACGCGGAGAACTTCATCGGCAAGCCCCACG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGCCACGATGCTTCTGTaGGTCCCCAGGAGAGAACCG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSATMLL*VPRREP
Trigger: CGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTAGGGGTCCCAGAGCCTaGTCTCTGAGGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPRGPRA*SLRLDW
Trigger: CCAGTCCAGCCTCAGAGATCAGGCTCTGGGACCCCT...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGGCGTACCATGGGGCTaGGGGTCCATCCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAGVPWG*GSIPSP
Trigger: AGGGCTTGGGATGGACCCTCAGCCCCATGGTACGCC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTGGGTGGCAGTGTTCTaGAGGCCTGACCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPWVAVF*RPDPLR
Trigger: CCTCAGCGGGTCAGGCCTTCAGAACACTGCCACCCA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGCCCGGTGGCCTCGCTaGTCAGGCCTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIARWPR*SGLGVQ
Trigger: CTGCACGCCCAGGCCTGAGCAGCGAGGCCACCGGGC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGTTCAAACTTGTTGGTaGGAGCAGCCGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSVQTCW*EQPRAR
Trigger: CCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAAC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSLQPGQ*VHALHH
Trigger: ATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPGAAH*CSPAWP
Trigger: TGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAATCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEESPPAR*SSLLFS
Trigger: GGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGA...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTCTGACACCTTGCTGTaGAGGAGCAGACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPSDTLL*RSRLWR
Trigger: GCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGCCTTCTGACACCTTaGTGTGCAGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGLLTP*CAGADC
Trigger: ACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGGAAGGAGCACTCGGTaGCGTCCACCCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKGRSTR*RPPQRR
Trigger: CCTTCTTTGGGGTGGACGGCACCGAGTGCTCCTTCC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGGGACTCCTTCCCGCTaGCCATCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSGTPSR*PSGPEG
Trigger: ACCTTCTGGACCTGATGGGCAGCGGGAAGGAGTCCC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGGACTCCTTCCCGCTaGCCATCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGTPSR*PSGPEG
Trigger: ACCTTCTGGACCTGATGGGCAGCGGGAAGGAGTCCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGGGACTCCTTCCCGCTaGCCATCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAGTPSR*PSGPEG
Trigger: ACCTTCTGGACCTGATGGGCAGCGGGAAGGAGTCCC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGGGACTCCTTCCCGCTaGCCATCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPGTPSR*PSGPEG
Trigger: ACCTTCTGGACCTGATGGGCAGCGGGAAGGAGTCCC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGATGTGGACCAGGATCTaGTTCTGGTCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRMWTRI*FWSLWV
Trigger: CACCCAGAGGGACCAGAAGCAGATCCTGGTCCACAT...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGAATGTCCGCCCACTaGACCATCTCCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRMSAH*TISPRG
Trigger: GCCCCTAGGGGAGATGGTGCAGTGGGCGGACATTCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCGGGGCCCTCGTAGGGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGAGAATGTCCGCCCACTaGACCATCTCCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGALVGEAKPDEEFGLAQRMSAH*TISPRG
Trigger: GCCCCTAGGGGAGATGGTGCAGTGGGCGGACATTCT...CTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGCCCAGGACATAGAGTaGAGTCAGAATGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTAQDIE*SQNVRP
Trigger: TGGGCGGACATTCTGACTGCACTCTATGTCCTGGGC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGGACTGCAGGAAGATaGAACCATTGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGTAGR*NHWRWP
Trigger: AGGCCATCGCCAATGGTTGCATCTTCCTGCAGTCCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCTCTGGAGGTGGGCTTaGCTCGGAAGAACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPLWRWA*LGRTRG
Trigger: ACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCTGTCACAGGGCACCTaGAGCTTGAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRALSQGT*SLRKAS
Trigger: GGACGCCTTCCTCAAGCTGCAGGTGCCCTGTGACAG...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCTGTCACAGGGCACCTaGAGCTTGAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKLSQGT*SLRKAS
Trigger: GGACGCCTTCCTCAAGCTGCAGGTGCCCTGTGACAG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKLRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVLRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCAATGGGCCCTGTGTaGCTGGCTCCCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPMGPV*LAPLTG
Trigger: TCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTCCACCACCTGGAGTTaGAGGTCATGCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPSTTWS*RSCQDG
Trigger: CCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCAGGAAGGGCCATCGTaGCCTGACGCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPQEGPS*PDAPPR
Trigger: ACGTGGTGGAGCGTCAGGGCACGATGGCCCTTCCTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428789.6
ENST00000565043.5
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKCCSPA*PVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCA...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPFWAIA*IRSMRP
Trigger: CGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCTGTGGCGCAGGATCTaGTCCACCTTCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPLWRRI*STFTAM
Trigger: CATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVCRSRL*RRIWST
Trigger: GGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCA...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGAACTTGGGGTCACTaGGTGCCTCACACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGTWGH*VPHTGP
Trigger: GGGACCAGTGTGAGGCACCCAGTGACCCCAAGTTCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGACCAGGATCTGCTTCTaGTCCCTCTGGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRTRICF*SLWVAP
Trigger: GGGGGCCACCCAGAGGGACCAGAAGCAGATCCTGGT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTCCAGTAGCCCCAGTTaGTCCGGTAGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPSSSPS*SGSRAA
Trigger: CGCTGCACGGCTACCGGACCAACTGGGGCTACTGGA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRPRKNS*LRELWG
Trigger: GCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSPRKNS*LRELWG
Trigger: GCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCACACCTCTCTGGAGGTaGGCTTGCCTCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTTPLWR*ACLGRT
Trigger: AGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGGGAGAACACCTCTCTaGAGGTGGGCTTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVGRTPL*RWACLG
Trigger: TCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCCCACTCGAGGTGGGTaGCATTGGGGGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRPTRGG*HWGPGQ
Trigger: TTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCCACTCGAGGTGGGTaGCATTGGGGGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPTRGG*HWGPGQ
Trigger: TTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACGAGCCCACTCGAGGTaGGTGGCATTGGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEERAHSR*VALGAR
Trigger: CCTGGCCCCCAATGCCACCCACCTCGAGTGGGCTCG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCCCAGGAGCCAAGCTaGTGTTCCGAGCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPQEPS*CSEPTR
Trigger: TCGAGTGGGCTCGGAACACCAGCTTGGCTCCTGGGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACACTCCTGGCCAGGCTaGGCGAACGCCGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEHSWPG*ANAGYR
Trigger: CCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAGTG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGDRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTGGGCCCTGTGTGCCTaGCTCCCCTCACAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAWALCA*LPSQEK
Trigger: CTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVELHPQL*SSSVEG
Trigger: TCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCAGCACCTGCGGAAGTaGCTAGTGCATGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPQHLRK*LVHEGH
Trigger: GTGGCCTTCATGCACTAGCCACTTCCGCAGGTGCTG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCATCGTGGTTTCTGTaGCTGCAGGGGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPSWFL*LQGPAR
Trigger: CCTGGCTGGCCCCTGCAGCCACAGAAACCACGATGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAATCAGGACCCGAGGGCTaGACACGTCCCCGGACTCCT +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEESGPEG*TRPRTP
Trigger: AGGAGTCCGGGGACGTGTTCAGCCCTCGGGTCCTGA...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGGTAGTCGGTGTAGATaGGGTCGAAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAGSRCR*GRRAGA
Trigger: TGCCCCTGCCCTTCGACCTCATCTACACCGACTACC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGCACCGGTACTTCTTaGAGGAGAGTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGTGTS*RRVPCA
Trigger: GGCACATGGGACTCTCCTTCAAGAAGTACCGGTGCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGGCACCGGTACTTCTTaGAGGAGAGTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVGTGTS*RRVPCA
Trigger: GGCACATGGGACTCTCCTTCAAGAAGTACCGGTGCC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCGGACACGAAGCCCATaGAGGAGTTGTCGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRRTRSP*RSCRGY
Trigger: ATACCCCCGACAACTCCTTCATGGGCTTCGTGTCCG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGCTTCTCCGTCTCGTTaGGCTCCTCGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGASPSR*APRTRS
Trigger: GCTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGCTTCTCCGTCTCGTTaGGCTCCTCGGACACGAAGC +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRASPSR*APRTRS
Trigger: GCTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGATTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRLRSSC*NSGCGK
Trigger: CTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAA...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCGTGGGGCTTGCCGATaGAGTTCTCCGCGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRRGACR*SSPRRD
Trigger: ATCCCTACGCGGAGAACTTCATCGGCAAGCCCCACG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACGTGGGGCTTGCCGATaGAGTTCTCCGCGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGRGACR*SSPRRD
Trigger: ATCCCTACGCGGAGAACTTCATCGGCAAGCCCCACG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAGGGGTCCCAGAGCCTaGTCTCTGAGGCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGARGPRA*SLRLDW
Trigger: CCAGTCCAGCCTCAGAGATCAGGCTCTGGGACCCCT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGTTCAAACTTGTTGGTaGGAGCAGCCGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLVQTCW*EQPRAR
Trigger: CCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAAC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR GCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCTGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAWPVRP*ASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCA...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRLQPGQ*VHALHH
Trigger: ATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGCTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLLQPGQ*VHALHH
Trigger: ATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAG...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAGGGGGCATCCTGTCTaGGGGAAAGTGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGARGHPV*GKVQVA
Trigger: GGCGACCTGCACTTTCCCGCAGACAGGATGCCCCCT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCTCTGACACCTTGCTGTaGAGGAGCAGACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPSDTLL*RSRLWR
Trigger: GCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGA...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACTTGGGGTCACTGGGTaGCTCACACTGGTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEELGVTG*LTLVPP
Trigger: CGGCGGGACCAGTGTGAGGCACCCAGTGACCCCAAG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGAAGGAGCACTCGGTaGCGTCCACCCCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGRSTR*RPPQRR
Trigger: CCTTCTTTGGGGTGGACGGCACCGAGTGCTCCTTCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGGGAGGGGCTTGGGTaGCCTCTGGGCAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGEGLG*PLGSRL
Trigger: CAGACGGCTGCCCAGAGGGCACCCAAGCCCCTCCCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGAAGGTGGGACAGGTTaGTTCGGAAAACTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPEGGTG*FGKLPG
Trigger: TCCAGGCAGTTTTCCGAAGCAACCTGTCCCACCTTC...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCATGTGGACCAGGATCTaGTTCTGGTCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPMWTRI*FWSLWV
Trigger: CACCCAGAGGGACCAGAAGCAGATCCTGGTCCACAT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAAGGAGAGTCCCATGTaGCGCTTCATCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPKESPM*RFICCR
Trigger: CCTGCAGCAGATGAAGCGGCACATGGGACTCTCCTT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCAGATGCTCGCCTCCTTaGCGTACACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPRCSPP*RTPRPC
Trigger: ACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCCTTCCCCTTCCAGATaGTCGCCTCCTTGCCGTACA +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRPSPSR*SPPCRT
Trigger: TGTACGGCAAGGAGGCGAGCATCTGGAAGGGGAAGG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000428789.6
CDS-3UTR GCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCTCTGGAGGTGGGCTTaGCTCGGAAGAACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRLWRWA*LGRTRG
Trigger: ACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCCCAGGCAGGTGTCGGTaGAGGCCCTCCCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIPGRCR*RPSQAR
Trigger: CCGTGCCTGGGAGGGCCTGCACCGACACCTGCCTGG...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCTCAGAACCTGCTGGTaGTTTCTCCCGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRLRTCW*FLPRQE
Trigger: CTCCTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTCGTGGTTTCTGTGGCTaGAGGGGCCAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGARGFCG*RGQPGL
Trigger: CAGACCTGGCTGGCCCCTGCAGCCACAGAAACCACG...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGATGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGCCSPA*PVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCA...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCATGTCGGAGACGTTCTaGGCAATAGCCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPMSETF*AIAWIR
Trigger: GCGGATCCAGGCTATTGCCCAGAACGTCTCCGACAT...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCATGTCGGAGACGTTCTaGGCAATAGCCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPMSETF*AIAWIR
Trigger: GCGGATCCAGGCTATTGCCCAGAACGTCTCCGACAT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTGTGGCGCAGGATCTaGTCCACCTTCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPLWRRI*STFTAM
Trigger: CATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAG...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRACRSRL*RRIWST
Trigger: GGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGGAACTTGGGGTCACTaGGTGCCTCACACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAGTWGH*VPHTGP
Trigger: GGGACCAGTGTGAGGCACCCAGTGACCCCAAGTTCC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGATCAGGTCCAGAAGGTaGGACAGGTTGCTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEIRSRR*DRLLRK
Trigger: TTTCCGAAGCAACCTGTCCCACCTTCTGGACCTGAT...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGTGGCGTACTCCTCGTaGTTGTACGCAGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRVAYSS*LYAGSV
Trigger: GACGGAACCTGCGTACAACCACGAGGAGTACGCCAC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTTCCAGTAGCCCCAGTTaGTCCGGTAGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGASSSPS*SGSRAA
Trigger: CGCTGCACGGCTACCGGACCAACTGGGGCTACTGGA...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGGAGAACACCTCTCTaGAGGTGGGCTTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLGRTPL*RWACLG
Trigger: TCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGGGAGAACACCTCTCTaGAGGTGGGCTTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRGRTPL*RWACLG
Trigger: TCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRASQISP*SRQVSV
Trigger: CACCGACACCTGCCTGGACCACGGGCTAATCTGTGA...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAAACGCCGGGTACAGGTaGTTCATCTCCGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRNAGYR*FISDSV
Trigger: CACCGAGTCGGAGATGAACCACCTGTACCCGGCGTT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAAGAGCCGGCGGTACTTaGTGTTGGAGCCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEERAGGT*CWSRRS
Trigger: GCTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGATTCACAGACAGCCCTaGCACAAGGCCACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRIHRQP*HKATWP
Trigger: GGGCCAGGTGGCCTTGTGCCAGGGCTGTCTGTGAAT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGATTCACAGACAGCCCTaGCACAAGGCCACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLIHRQP*HKATWP
Trigger: GGGCCAGGTGGCCTTGTGCCAGGGCTGTCTGTGAAT...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGGGCTCAGAACCTGCTaGTGCTTTCTCCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAGLRTC*CFLPRQ
Trigger: CTGCCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACCGACCACCTGCTCCTaGGCCATGCGGACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEPTTCS*AMRTLS
Trigger: GCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGCCCCTTTCGCCACCTaGCCCAGATCCGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEAPFAT*PRSGLA
Trigger: TGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGGGGC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGGGCCCAAGAACGACTaGGCCCCTTTCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEGPKND*APFATW
Trigger: CCAGGTGGCGAAAGGGGCCCAGTCGTTCTTGGGCCC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGAGTGTAGAGGGAGGGTaGGGGAATCGGGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKSVEGG*GNREIG
Trigger: CCCGATTTCCCGATTCCCCCACCCTCCCTCTACACT...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCAGTGTAGAGGGAGGGTaGGGGAATCGGGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRASVEGG*GNREIG
Trigger: CCCGATTTCCCGATTCCCCCACCCTCCCTCTACACT...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCAACCAGGGTCTGGGTaGTCCCTACACCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAQPGSG*SLHPQL
Trigger: CAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCCAACCAGGGTCTGGGTaGTCCCTACACCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRQPGSG*SLHPQL
Trigger: CAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTG...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGGGCAACTGGAAACTaGGCAGGGCGTACCATGGGG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRARATGN*AGRTMG
Trigger: CCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAAGGGCAACTGGAAACTaGGCAGGGCGTACCATGGGG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGRATGN*AGRTMG
Trigger: CCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCT...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCAGTGGACAGGGCAACTaGAAACTGGGCAGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSSGQGN*KLGRAY
Trigger: GTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACT...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGATAAAACTGGGTGGGTaGCAGTGTTCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEIKLGG*QCSEGL
Trigger: CAGGCCTTCAGAACACTGCCACCCACCCAGTTTTAT...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGATAAAACTGGGTGGGTaGCAGTGTTCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEIKLGG*QCSEGL
Trigger: CAGGCCTTCAGAACACTGCCACCCACCCAGTTTTAT...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGTGGGTGGGGTTGCCTaGAGAGGGAGCGGGATTATA +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRVGGVA*RGSGII
Trigger: TATAATCCCGCTCCCTCTCCAGGCAACCCCACCCAC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGAGGAAGCGTCCAGCCTaGCCCCTCCACCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLRKRPA*PLHQLS
Trigger: TGAGAGTTGGTGGAGGGGCCAGGCTGGACGCTTCCT...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGGGGCCAGCCAGGTCTaGAGGGGACTCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEGASQV*RGLPQE
Trigger: TTCCTGTGGGAGTCCCCTCCAGACCTGGCTGGCCCC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGGTAGTCGGTGTAGATaGGGTCGAAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAGSRCR*GRRAGA
Trigger: TGCCCCTGCCCTTCGACCTCATCTACACCGACTACC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGCACCGGTACTTCTTaGAGGAGAGTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGGTGTS*RRVPCA
Trigger: GGCACATGGGACTCTCCTTCAAGAAGTACCGGTGCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCGGACACGAAGCCCATaGAGGAGTTGTCGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRRTRSP*RSCRGY
Trigger: ATACCCCCGACAACTCCTTCATGGGCTTCGTGTCCG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALRSSC*NSGCGK
Trigger: CTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPLRSSC*NSGCGK
Trigger: CTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGAGGGCCATGCGGACTCTaGGCAGTCCGACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGGPCGL*AVRHLL
Trigger: AAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCC...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTTACGAATGAGTGCATaGGTGAAGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEELRMSA*VKEARE
Trigger: CTCCCTTGCTTCCTTCACTCATGCACTCATTCGTAA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428789.6
CDS-3UTR GCA 90 bp GGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGGGGCCACGAACCCTCTaGGGGCCGAAGCCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: GGRNALWAVPQCGPNLLQGPRTL*GPKPRP
Trigger: CGGACGCGGCTTCGGCCCGCAGAGGGTTCGTGGCCC...CTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRWPVRP*ASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGACCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGPGAAH*CSPAWP
Trigger: TGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTCTGACACCTTGCTGTaGAGGAGCAGACTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRSDTLL*RSRLWR
Trigger: GCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCGCCCAGGACATAGAGTaGAGTCAGAATGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVAQDIE*SQNVRP
Trigger: TGGGCGGACATTCTGACTGCACTCTATGTCCTGGGC...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGAAGGAGAGTCCCATGTaGCGCTTCATCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKKESPM*RFICCR
Trigger: CCTGCAGCAGATGAAGCGGCACATGGGACTCTCCTT...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAGATGCTCGCCTCCTTaGCGTACACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRRCSPP*RTPRPC
Trigger: ACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGAGATGCTCGCCTCCTTaGCGTACACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLRCSPP*RTPRPC
Trigger: ACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCT...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCTTCCCCTTCCAGATaGTCGCCTCCTTGCCGTACA +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPSPSR*SPPCRT
Trigger: TGTACGGCAAGGAGGCGAGCATCTGGAAGGGGAAGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000428789.6
CDS-3UTR GCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGGGACTGCAGGAAGATaGAACCATTGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSGTAGR*NHWRWP
Trigger: AGGCCATCGCCAATGGTTGCATCTTCCTGCAGTCCC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGGCTGAAGCGGGACTaGAGGAAGATGCAACCATTG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGLKRD*RKMQPL
Trigger: CAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGATCATCTCCGACTCGGTaGTGTCACAGGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGSSPTR*CHRAPA
Trigger: TGCAGGTGCCCTGTGACAGCACCGAGTCGGAGATGA...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGTCATCTCCGACTCGGTaGTGTCACAGGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLSSPTR*CHRAPA
Trigger: TGCAGGTGCCCTGTGACAGCACCGAGTCGGAGATGA...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGACCAGGGCTCAGAACCTaGTGGTGCTTTCTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGPGLRT*WCFLPR
Trigger: CCGCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGG...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCCTGCTTGGCCACGATaGTTCTGTGAGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPPAWPR*FCESPG
Trigger: TCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGCGGGGCCCTCGTAGGGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGCCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GGALVGEAKPDEEFGLAQPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...CTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCTGGAGTTGCAGGTCATaGCAGGATGGGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPWSCRS*QDGFWE
Trigger: CTCCCAAAACCCATCCTGGCATGACCTGCAACTCCA...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTCCACCACCTGGAGTTaGAGGTCATGCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPSTTWS*RSCQDG
Trigger: CCCATCCTGGCATGACCTGCAACTCCAGGTGGTGGA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCCTGGAGCTTCCAGATaGTCGCCTCCTTGCCGTACA +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRPGASR*SPPCRT
Trigger: TGTACGGCAAGGAGGCGAGCATCTGGAAGCTCCAGG...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCCCGGACGCACCGTCCTaGGCCCAGCTCTCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: WVVEMHSGLYHSVVQIFSPDAPS*AQLSPR
Trigger: ACGCGGCGAGAGCTGGGCCCAGGACGGTGCGTCCGG...GGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCATTGTTCAAACTTGTTaGTGCGAGCAGCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPIVQTC*CEQPRA
Trigger: CGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAAT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRFWAIA*IRSMRP
Trigger: CGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGATGTCGGAGACGTTCTaGGCAATAGCCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRMSETF*AIAWIR
Trigger: GCGGATCCAGGCTATTGCCCAGAACGTCTCCGACAT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCTGTGGCGCAGGATCTaGTCCACCTTCACAGCGATG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPLWRRI*STFTAM
Trigger: CATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGTCAGGAAGCCGATGTaGACCAGGATCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPVRKPM*TRICFW
Trigger: CCAGAAGCAGATCCTGGTCCACATCGGCTTCCTGAC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGTCAGGAAGCCGATGTaGACCAGGATCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSVRKPM*TRICFW
Trigger: CCAGAAGCAGATCCTGGTCCACATCGGCTTCCTGAC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGTGGCGTACTCCTCGTaGTTGTACGCAGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRVAYSS*LYAGSV
Trigger: GACGGAACCTGCGTACAACCACGAGGAGTACGCCAC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGTGGCGTACTCCTCGTaGTTGTACGCAGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPVAYSS*LYAGSV
Trigger: GACGGAACCTGCGTACAACCACGAGGAGTACGCCAC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGTGCGGTAAGAGGCCGTaGTTCTTCACAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRCGKRP*FFTKAG
Trigger: GCCAGCCTTTGTGAAGAACCACGGCCTCTTACCGCA...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTGCGGTAAGAGGCCGTaGTTCTTCACAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKCGKRP*FFTKAG
Trigger: GCCAGCCTTTGTGAAGAACCACGGCCTCTTACCGCA...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAACACCTCTCTGGAGGTaGGCTTGCCTCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRTPLWR*ACLGRT
Trigger: AGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACCCACTCGAGGTGGGTaGCATTGGGGGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEPTRGG*HWGPGQ
Trigger: TTGTCCTGGCCCCCAATGCCACCCACCTCGAGTGGG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPSQISP*SRQVSV
Trigger: CACCGACACCTGCCTGGACCACGGGCTAATCTGTGA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTCACAGATTAGCCCGTaGTCCAGGCAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRSQISP*SRQVSV
Trigger: CACCGACACCTGCCTGGACCACGGGCTAATCTGTGA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAAACGCCGGGTACAGGTaGTTCATCTCCGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGNAGYR*FISDSV
Trigger: CACCGAGTCGGAGATGAACCACCTGTACCCGGCGTT...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKSPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRCFCESPGENRSLPGRSSPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRASPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGAGACCGTGGGGCAGCCTaGTCCCTGTTCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGDRGAA*SLFLSL
Trigger: AAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTC...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGGGAGGGCCCCTCCTTaGACCCTTCAGGGACCGTGG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIGRAPP*TLQGPW
Trigger: CCACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTGCCAGGATGGGTTTTaGGAGAAGCCCAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPCQDGF*EKPRVK
Trigger: TTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRQVMPG*VLGEAQ
Trigger: CTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCAGGTCATGCCAGGATaGGTTTTGGGAGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRQVMPG*VLGEAQ
Trigger: CTGGGCTTCTCCCAAAACCCATCCTGGCATGACCTG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCAGCACCTGCGGAAGTaGCTAGTGCATGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPQHLRK*LVHEGH
Trigger: GTGGCCTTCATGCACTAGCCACTTCCGCAGGTGCTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAGGGCAACTGGAAACTaGGCAGGGCGTACCATGGGG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGARATGN*AGRTMG
Trigger: CCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGCCTCCCGGGAAGGGTaGAGGAGCAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIASREG*RSRPRL
Trigger: CAGCCTAGGCCTGCTCCTCCACCCTTCCCGGGAGGC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTCAGGACCCGAGGGCTaGACACGTCCCCGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWSGPEG*TRPRTP
Trigger: AGGAGTCCGGGGACGTGTTCAGCCCTCGGGTCCTGA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWPSGRL*PAGHGP
Trigger: TGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGGAAGAACTCGTGGTTaGGGGAGCTGTGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIGRTRG*GSCGAG
Trigger: GCCCGCCCCACAGCTCCCTCAACCACGAGTTCTTCC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGTGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGT +
Preference number: 4 (lower is better)
Translates to: PLHQLSASRGCLPGRVEECFKLL*VVVVDC
Trigger: ACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCA...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGGGAGAAGCCCAGAGTaGAAAGGGTTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: DASVSPQERTGACLGGPRGRSPE*KGLEQA
Trigger: TGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGTTACGAATGAGTGCATaGGTGAAGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRLRMSA*VKEARE
Trigger: CTCCCTTGCTTCCTTCACTCATGCACTCATTCGTAA...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428789.6
ENST00000565043.5
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGCAGGTCGCTCATCTTaGGCAGGACGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIAGRSS*AGRRGT
Trigger: AGTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGGGCCTTCTGACACCTTaGTGTGCAGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRGLLTP*CAGADC
Trigger: ACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCC...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGGCCTTCTGACACCTTaGTGTGCAGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAGLLTP*CAGADC
Trigger: ACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGAAGGTGGGACAGGTTaGTTCGGAAAACTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPREGGTG*FGKLPG
Trigger: TCCAGGCAGTTTTCCGAAGCAACCTGTCCCACCTTC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTATGTGGACCAGGATCTaGTTCTGGTCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPMWTRI*FWSLWV
Trigger: CACCCAGAGGGACCAGAAGCAGATCCTGGTCCACAT...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAAGAATGTCCGCCCACTaGACCATCTCCCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEERMSAH*TISPRG
Trigger: GCCCCTAGGGGAGATGGTGCAGTGGGCGGACATTCT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGCCCAGGACATAGAGTaGAGTCAGAATGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPAQDIE*SQNVRP
Trigger: TGGGCGGACATTCTGACTGCACTCTATGTCCTGGGC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGGACTGCAGGAAGATaGAACCATTGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGTAGR*NHWRWP
Trigger: AGGCCATCGCCAATGGTTGCATCTTCCTGCAGTCCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGGGCTGAAGCGGGACTaGAGGAAGATGCAACCATTG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRGLKRD*RKMQPL
Trigger: CAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGGCTGAAGCGGGACTaGAGGAAGATGCAACCATTG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLGLKRD*RKMQPL
Trigger: CAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGGCTGAAGCGGGACTaGAGGAAGATGCAACCATTG +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGGLKRD*RKMQPL
Trigger: CAATGGTTGCATCTTCCTGCAGTCCCGCTTCAGCCC...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCAGGACAAAGGGGCTCTaGGGGGCGTGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIRTKGL*GAWASG
Trigger: ACCAGAGGCCCACGCCCCGCAGAGCCCCTTTGTCCT...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACTGTCACAGGGCACCTaGAGCTTGAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEELSQGT*SLRKAS
Trigger: GGACGCCTTCCTCAAGCTGCAGGTGCCCTGTGACAG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACCTGTTCCTCTCCCTTaGAAGTCTAGAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGPVPLP*KSRGPI
Trigger: GATGGGGCCTCTAGACTTGCAAGGGAGAGGAACAGG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCTGTGCGGATGGTGAATaGCGAGTCCCCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQICADGE*RVPQAP
Trigger: CGGCGCCTGGGGGACTCGCCATTCACCATCCGCACA...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGGCTTGGGTGCCCTCTaGGCAGCCGTCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIGLGAL*AAVWFL
Trigger: GAGGAACCAGACGGCTGCCCAGAGGGCACCCAAGCC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTATCAGGTCCAGAAGGTaGGACAGGTTGCTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGIRSRR*DRLLRK
Trigger: TTTCCGAAGCAACCTGTCCCACCTTCTGGACCTGAT...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGTCAGGAAGCCGATGTaGACCAGGATCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRVRKPM*TRICFW
Trigger: CCAGAAGCAGATCCTGGTCCACATCGGCTTCCTGAC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGTCAGGAAGCCGATGTaGACCAGGATCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLGHDASVSPQERTGACLVRKPM*TRICFW
Trigger: CCAGAAGCAGATCCTGGTCCACATCGGCTTCCTGAC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTGCGGTAAGAGGCCGTaGTTCTTCACAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRCGKRP*FFTKAG
Trigger: GCCAGCCTTTGTGAAGAACCACGGCCTCTTACCGCA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCACACCTCTCTGGAGGTaGGCTTGCCTCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRTPLWR*ACLGRT
Trigger: AGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGACACCTCTCTGGAGGTaGGCTTGCCTCGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRATPLWR*ACLGRT
Trigger: AGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGAGGGAGAACACCTCTCTaGAGGTGGGCTTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGGRTPL*RWACLG
Trigger: TCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCCC...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAACGCCGGGTACAGGTaGTTCATCTCCGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGANAGYR*FISDSV
Trigger: CACCGAGTCGGAGATGAACCACCTGTACCCGGCGTT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAGTCCGACACCTGCTTaGCCACGATGCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WGRRATRRRTARSRGGLRSPTPA*PRCFCE
Trigger: CTCACAGAAGCATCGTGGCCAAGCAGGTGTCGGACT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCAACAAATCCACCACCTaGAGTTGCAGGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPNKSTT*SCRSCQ
Trigger: CTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAGTGGACAGGGCAACTaGAAACTGGGCAGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGASGQGN*KLGRAY
Trigger: GTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGTGGGTGGGGTTGCCTaGAGAGGGAGCGGGATTATA +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAVGGVA*RGSGII
Trigger: TATAATCCCGCTCCCTCTCCAGGCAACCCCACCCAC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGGGCCAGCCAGGTCTaGAGGGGACTCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGASQV*RGLPQE
Trigger: TTCCTGTGGGAGTCCCCTCCAGACCTGGCTGGCCCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGGCACCGGTACTTCTTaGAGGAGAGTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEGTGTS*RRVPCA
Trigger: GGCACATGGGACTCTCCTTCAAGAAGTACCGGTGCC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGT +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTCFKLL*VVVVDC
Trigger: ACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACCAGAGCCTGATCTCTaGGGCTGGACTGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEPEPDL*GWTGNL
Trigger: CAGGTTTCCAGTCCAGCCTCAGAGATCAGGCTCTGG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ATTTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCGCCCGGTGGCCTCGCTaGTCAGGCCTGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: IWVVEMHSGLYHSVVQIFARWPR*SGLGVQ
Trigger: CTGCACGCCCAGGCCTGAGCAGCGAGGCCACCGGGC...GAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGATGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGWPVRP*ASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCA...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGAAGGTGGGACAGGTTaGTTCGGAAAACTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPEGGTG*FGKLPG
Trigger: TCCAGGCAGTTTTCCGAAGCAACCTGTCCCACCTTC...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCACCCCTAAGTTACTCTaGAGCTCCTTCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPTPKLL*SSFRET
Trigger: AGTCTCCCTGAAGGAGCTGCAGAGTAACTTAGGGGT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAACCCCTAAGTTACTCTaGAGCTCCTTCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRTPKLL*SSFRET
Trigger: AGTCTCCCTGAAGGAGCTGCAGAGTAACTTAGGGGT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTAAGGAGAGTCCCATGTaGCGCTTCATCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAKESPM*RFICCR
Trigger: CCTGCAGCAGATGAAGCGGCACATGGGACTCTCCTT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCAACATGGTCATGAACTaGTTGGGGTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SACCLLLFPGTALLCQLPNMVMN*LGLRFQ
Trigger: CTGGAACCTCAACCCCAAGCAGTTCATGACCATGTT...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGTATTTGTTCAGGATaGCCAGGAACTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTCICSG*PGTSPS
Trigger: GGAAGGAGAAGTTCCTGGGCATCCTGAACAAATACA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTTCTCGTAGTACACGGTaGCATGGATCTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPSRSTR*HGSPCI
Trigger: AATACATGGAGATCCATGGCACCGTGTACTACGAGA...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGCTGGACTGGAAACCTaGCCCTTGGAGGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWAGLET*PLEGVG
Trigger: CCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCCAGC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCATCCTGGGGCAGGCGTaGCACTCGGAGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIILGQA*HSEKDS
Trigger: GCTGTCCTTCTCCGAGTGGCACGCCTGCCCCAGGAT...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGACTCGCTGCTCAGGCCTaGGCGTGCAGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRLAAQA*ACSGGS
Trigger: GCTCCCTCCGCTGCACGCCCAGGCCTGAGCAGCGAG...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGATTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGFWAIA*IRSMRP
Trigger: CGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAA...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAATCAGGTCCAGAAGGTaGGACAGGTTGCTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRIRSRR*DRLLRK
Trigger: TTTCCGAAGCAACCTGTCCCACCTTCTGGACCTGAT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCATCAGGTCCAGAAGGTaGGACAGGTTGCTTCGGAAA +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPIRSRR*DRLLRK
Trigger: TTTCCGAAGCAACCTGTCCCACCTTCTGGACCTGAT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCACCCTTCAGGGACCGTaGGGCAGCCTGGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQITLQGP*GSLVPV
Trigger: AACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGT...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRALHPQL*SSSVEG
Trigger: TCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTGCCAGGATGGGTTTTaGGAGAAGCCCAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKCQDGF*EKPRVK
Trigger: TTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCA...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCAACAAATCCACCACCTaGAGTTGCAGGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPNKSTT*SCRSCQ
Trigger: CTGGCATGACCTGCAACTCCAGGTGGTGGATTTGTT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp TTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCGCACCCCGGATGGAGTaGCAGGTGCCACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGGRNALWAVPQCGPNLLAPRME*QVPPLP
Trigger: GGGGAGCGGTGGCACCTGCCACTCCATCCGGGGTGC...GAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp TGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCGGACAGCACCCCGGATaGAGTGGCAGGTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: WVVEMHSGLYHSVVQIFSGQHPG*SGRCHR
Trigger: GCGGTGGCACCTGCCACTCCATCCGGGGTGCTGTCC...GGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGATCCAGAGGCGGTTTaGGGCTGGAGGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWDPEAV*GWRKLE
Trigger: CTCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp AGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACCTGTCTGCGGGAAAGTaGAGGTCGCCGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RNALWAVPQCGPNLLQIHLSAGK*RSPPAR
Trigger: CCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAG...GTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCACCCCTAAGTTACTCTaGAGCTCCTTCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRTPKLL*SSFRET
Trigger: AGTCTCCCTGAAGGAGCTGCAGAGTAACTTAGGGGT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CTCCTGGCCAGGCTGGGCGAACGCCGGGTACAGGTGGTTCATCTCCGACTCGGTTGTATTTGTTCAGGATaGCCAGGAACTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLARLGERRVQVVHLRLGCICSG*PGTSPS
Trigger: GGAAGGAGAAGTTCCTGGGCATCCTGAACAAATACA...ACCGAGTCGGAGATGAACCACCTGTACCCGGCGTTCGCCCAGCCTGGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCTGTCACAGGGCACCTaGAGCTTGAGGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWLSQGT*SLRKAS
Trigger: GGACGCCTTCCTCAAGCTGCAGGTGCCCTGTGACAG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTAAAGAGTGTCTCTATTaGTTTCCCCCACAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPKECLY*FPPQVS
Trigger: ACTAACCTGTGGGGGAAAGCAATAGAGACACTCTTT...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCCCACCACGTACCGGCTaGACAAATGTTTTACGAATG +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVPPRTG*TNVLRM
Trigger: CATTCGTAAAACATTTGTGCAGCCGGTACGTGGTGG...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428789.6
ENST00000565043.5
CDS-3UTR GCA 90 bp AGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACGTGCCACCGCTCCCCTaGTCCGTGTGCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RNALWAVPQCGPNLLQIHVPPLP*SVCLLP
Trigger: GGGGAGGAGGCACACGGAGCAGGGGAGCGGTGGCAC...GTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGACCCCGCTTCACATTTTaGGGACCGGGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRPRFTF*GPGGGA
Trigger: CGCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGG...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAATTGTTCAAACTTGTTaGTGCGAGCAGCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEIVQTC*CEQPRA
Trigger: CGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAAT...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CCA 90 bp TGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCTGTGCGGATGGTGAATaGCGAGTCCCCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WVVEMHSGLYHSVVQIFSCADGE*RVPQAP
Trigger: CGGCGCCTGGGGGACTCGCCATTCACCATCCGCACA...GGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWCCSPA*PVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWCRSRL*RRIWST
Trigger: GGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCCCTCGGAAGAACTCGTaGTTGAGGGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIPRKNS*LRELWG
Trigger: GCCCCACAGCTCCCTCAACCACGAGTTCTTCCGAGG...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGATAAAACTGGGTGGGTaGCAGTGTTCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAIKLGG*QCSEGL
Trigger: CAGGCCTTCAGAACACTGCCACCCACCCAGTTTTAT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WVVEMHSGLYHSVVQIFSPGAAH*CSPAWP
Trigger: TGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG...GGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGAAGGTGGGACAGGTTaGTTCGGAAAACTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RATRRRTARSRGGLRLEEEGGTG*FGKLPG
Trigger: TCCAGGCAGTTTTCCGAAGCAACCTGTCCCACCTTC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCAACATGGTCATGAACTaGTTGGGGTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRNMVMN*LGLRFQ
Trigger: CTGGAACCTCAACCCCAAGCAGTTCATGACCATGTT...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCTGTATTTGTTCAGGATaGCCAGGAACTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVCICSG*PGTSPS
Trigger: GGAAGGAGAAGTTCCTGGGCATCCTGAACAAATACA...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCTCTGGAGGTGGGCTTaGCTCGGAAGAACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWLWRWA*LGRTRG
Trigger: ACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTCATCTCCGACTCGGTaGTGTCACAGGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWSSPTR*CHRAPA
Trigger: TGCAGGTGCCCTGTGACAGCACCGAGTCGGAGATGA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGAGCAGTCCGACACCTaGTTGGCCACGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWEQSDT*LATMLL
Trigger: CAGAAGCATCGTGGCCAAGCAGGTGTCGGACTGCTC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCAAAGAGTGTCTCTATTaGTTTCCCCCACAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPKECLY*FPPQVS
Trigger: ACTAACCTGTGGGGGAAAGCAATAGAGACACTCTTT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ATTTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCGGATGGAGTGGCAGGTaGCACCGCTCCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: IWVVEMHSGLYHSVVQIFGWSGR*HRSPAP
Trigger: CGGAGCAGGGGAGCGGTGGCACCTGCCACTCCATCC...GAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGACGCCGGGCCGAGAACTaGCCTCCCAGAGACGTCATC +
Preference number: 4 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRRRAEN*PPRDVI
Trigger: GATGACGTCTCTGGGAGGCCAGTTCTCGGCCCGGCG...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR TCA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGATGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGT +
Preference number: 4 (lower is better)
Translates to: LGHDASVSPQERTGACLGCFKLL*VVVVDC
Trigger: ACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCA...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp AGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACGCAGGTCGCTCATCTTaGGCAGGACGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RNALWAVPQCGPNLLQIHAGRSS*AGRRGT
Trigger: AGTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGC...GTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAATCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKSPPAR*SSLLFS
Trigger: GGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGA...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGCCTTCTGACACCTTaGTGTGCAGGAGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGLLTP*CAGADC
Trigger: ACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGAAGGAGAGTCCCATGTaGCGCTTCATCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWKESPM*RFICCR
Trigger: CCTGCAGCAGATGAAGCGGCACATGGGACTCTCCTT...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTGTATTTGTTCAGGATaGCCAGGAACTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRACICSG*PGTSPS
Trigger: GGAAGGAGAAGTTCCTGGGCATCCTGAACAAATACA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTCTCGTAGTACACGGTaGCATGGATCTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: PAWPRCFCESPGENRSLPSRSTR*HGSPCI
Trigger: AATACATGGAGATCCATGGCACCGTGTACTACGAGA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCTCTCGTAGTACACGGTaGCATGGATCTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRSRSTR*HGSPCI
Trigger: AATACATGGAGATCCATGGCACCGTGTACTACGAGA...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR GCA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAAAAGAGTGTCTCTATTaGTTTCCCCCACAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRKECLY*FPPQVS
Trigger: ACTAACCTGTGGGGGAAAGCAATAGAGACACTCTTT...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTGCGGTAAGAGGCCGTaGTTCTTCACAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWCGKRP*FFTKAG
Trigger: GCCAGCCTTTGTGAAGAACCACGGCCTCTTACCGCA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
3UTR CAA 72 bp GAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTaGGAACAAATCCACCACCTGGAGTTGCAGGTCATG +
Preference number: 4 (lower is better)
Translates to: ETCPLEGVGIEA*EQIHHLELQVM
Trigger: CATGACCTGCAACTCCAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTTGCTTCAAACTCCTCTaGGTTGTTGTAGTCGACTGT +
Preference number: 4 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGACFKLL*VVVVDC
Trigger: ACAGTCGACTACAACAACTCAGAGGAGTTTGAAGCA...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGGAGAAGCCCAGAGTaGAAAGGGTTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGRSPE*KGLEQA
Trigger: TGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGGGAGAAGCCCAGAGTaGAAAGGGTTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIGRSPE*KGLEQA
Trigger: TGCTTGTTCCAACCCTTTTCACTCTGGGCTTCTCCC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGGGAGGGGGTAGGGATTaGGGCTTTGGAACAAATCCA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWGGGRD*GFGTNP
Trigger: TGGATTTGTTCCAAAGCCTCAATCCCTACCCCCTCC...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGACTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRLQPGQ*VHALHH
Trigger: ATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAG...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCTGGAGTTGCAGGTCATaGCAGGATGGGTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIWSCRS*QDGFWE
Trigger: CTCCCAAAACCCATCCTGGCATGACCTGCAACTCCA...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp ATTTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCGTCCCCTCACCTGTCTaGGGGAAAGTGCAGGTCGCC +
Preference number: 4 (lower is better)
Translates to: IWVVEMHSGLYHSVVQIFVPSPV*GKVQVA
Trigger: GGCGACCTGCACTTTCCCGCAGACAGGTGAGGGGAC...GAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCTACACCCCCAACTGTaGTCCTCAAGTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWLHPQL*SSSVEG
Trigger: TCCCTCTACACTTGAGGACCACAGTTGGGGGTGTAG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp TTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCTGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGGRNALWAVPQCGPNLLWPVRP*ASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCA...GAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GGAGAACACCTCTCTGGAGGTGGGCTTGCCTCGGAAGAACTCGTGGTTGAGGGATCTCGTAGTACACGGTaGCATGGATCTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: GEHLSGGGLASEELVVEGSRSTR*HGSPCI
Trigger: AATACATGGAGATCCATGGCACCGTGTACTACGAGA...TCCCTCAACCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGAGGTGTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCTGCCAGGATGGGTTTTaGGAGAAGCCCAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQICQDGF*EKPRVK
Trigger: TTTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCA...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR TCA 90 bp GGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAAGGAGATaGCGGACAGCACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: GGRNALWAVPQCGPNLLQIHKRR*RTAPRM
Trigger: CATCCGGGGTGCTGTCCGTCATCTCCTTTTGTGAAT...CTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAGTTCAAACTTGTTGGTaGGAGCAGCCGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKVQTCW*EQPRAR
Trigger: CCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAAC...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR GCA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGAACATGGTCATGAACTaGTTGGGGTTGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWNMVMN*LGLRFQ
Trigger: CTGGAACCTCAACCCCAAGCAGTTCATGACCATGTT...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR GCA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCCCACCACGTACCGGCTaGACAAATGTTTTACGAATG +
Preference number: 4 (lower is better)
Translates to: GLETCPLEGVGIEALEQIPPRTG*TNVLRM
Trigger: CATTCGTAAAACATTTGTGCAGCCGGTACGTGGTGG...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428789.6
CDS-3UTR CCA 90 bp TTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCATTGTTCAAACTTGTTaGTGCGAGCAGCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LGGRNALWAVPQCGPNLLIVQTC*CEQPRA
Trigger: CGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAAT...GAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAATGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKCCSPA*PVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCA...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp TTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCGGCTGTACCACAGTGTaGTCCAAATCTTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LGGRNALWAVPQCGPNLLGCTTV*SKSSPD
Trigger: ATCTGGAGAAGATTTGGACCACACTGTGGTACAGCC...GAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAGGTAGAAATGCACTCTaGGCTGTACCACAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKGRNAL*AVPQCG
Trigger: ACCACACTGTGGTACAGCCCAGAGTGCATTTCTACC...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR TCA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAAAACAGGCCACAAATGTaGCCAAATGTTAACGGTTGT +
Preference number: 4 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKNRPQM*PNVNGC
Trigger: ACAACCGTTAACATTTGGTCACATTTGTGGCCTGTT...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS CCA 90 bp ACTTGTTGGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTaGGCCCAGCTCTCGCCGCGTCCGGGCCACGAACCCTCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: TCWCEQPRARPDAPS*AQLSPRPGHEPSAG
Trigger: GCCCGCAGAGGGTTCGTGGCCCGGACGCGGCGAGAGCTGGGCCCAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS GCA 90 bp GGGGGCATCCTGTCTGCGGGAAAGTGCAGGTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCCAGCCTGGCCAGTGCGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: GGILSAGKCRSPPAR*SSLLFSSLASASMR
Trigger: GCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAGGATGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 90 bp GGCGGGAGAAGGCCCAGCCGTCGGGGGCCCTGCCATGCTCGGCATTaGGGGTGGAGGTCTGGTGGGCTCTCACATCCTGTGCCATGCCCA +
Preference number: 5 (lower is better)
Translates to: GGRRPSRRGPCHARH*GWRSGGLSHPVPCP
Trigger: TGGGCATGGCACAGGATGTGAGAGCCCACCAGACCTCCACCCCCAATGCCGAGCATGGCAGGGCCCCCGACGGCTGGGCCTTCTCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568598.1
CDS-3UTR CAA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGTCCCCGCTTCACATTTaGGGGACCGGGAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: WPLHQLSASRGCLPGRVESPLHI*GTGRRR
Trigger: GCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGGA...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCAGAGCCGGCGGTACTaGGTGTTGGAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: WPLHQLSASRGCLPGRVEQSRRY*VLEPAQ
Trigger: CTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCTG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 90 bp TCCCCTCACCTGTCTGCGGGAAAGTGCAGGTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCCAGCCTGGCCAGTGCGTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: SPHLSAGKCRSPPAR*SSLLFSSLASASMR
Trigger: GCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAGGTGAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS CCA 90 bp GCAGGTCGCCGCCGGCCCGGTGCAGCTCACTGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCTTCACCATCAGCTCCAGCAGGTCGC +
Preference number: 5 (lower is better)
Translates to: AGRRRPGAAHCCSPA*PVRPCASPSAPAGR
Trigger: GCGACCTGCTGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS CCA 90 bp AGAAGGCCCAGCCGTCGGGGGCCCTGCCATGCTCGGCATTGGGGGTaGAGGTCTGGTGGGCTCTCACATCCTGTGCCATGCCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RRPSRRGPCHARHWG*RSGGLSHPVPCPGS
Trigger: GCTCCCTGGGCATGGCACAGGATGTGAGAGCCCACCAGACCTCCACCCCCAATGCCGAGCATGGCAGGGCCCCCGACGGCTGGGCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568598.1
CDS-3UTR CAA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGCGGCGGTACTTGGTGTaGGAGCCGGCGCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PLHQLSASRGCLPGRVEERRYLV*EPAQLK
Trigger: CTTCAGCTGCGCCGGCTCCAACACCAAGTACCGCCG...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 5 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGGGGAGGGCCCCTCCTaGGACCCTTCAGGGACCGTG +
Preference number: 5 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAGEGPS*DPSGTV
Trigger: CACGGTCCCTGAAGGGTCCAAGGAGGGGCCCTCCCC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCCCGGAGGCGCCGCATaGTTCCTCGGAGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAPGGAA*FLGGGG
Trigger: GCCGCCTCCTCCGAGGAACAATGCGGCGCCTCCGGG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569840.7
CDS GCA 90 bp GCCTCTGGTGACCTGGAAGACGCAGCTTGGCCAGAGGAGGGGTGGTaGCCCTCTGCCATCTGGCATCCCATCCGGCTGGAGCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ASGDLEDAAWPEEGW*PSAIWHPIRLELLG
Trigger: ACCCAGCAGCTCCAGCCGGATGGGATGCCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS-3UTR CAA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGCAGGTCGCTCATCTaGCGCAGGACGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: DASVSPQERTGACLGGPRSRSLI*RRTPRD
Trigger: GTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCGGGGCCCTCGTAGGGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGAGCAGGTCGCTCATCTaGCGCAGGACGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: GGALVGEAKPDEEFGLAQSRSLI*RRTPRD
Trigger: GTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGCT...CTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CAA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCGGCCTTCTGACACCTaGCTGTGCAGGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: WPLHQLSASRGCLPGRVERPSDT*LCRSRL
Trigger: CAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGCCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGCGCTTCTCCGTCTCGTaGAGCTCCTCGGACACGAAG +
Preference number: 5 (lower is better)
Translates to: WPLHQLSASRGCLPGRVERFSVS*SSSDTK
Trigger: CTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCG...CTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCCAGGGCACCTGCAGCTaGAGGAAGGCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPQGTCS*RKASWL
Trigger: CAGCCAGGACGCCTTCCTCAAGCTGCAGGTGCCCTG...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCGGCGGTACTTGGTGTaGGAGCCGGCGCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPRRYLV*EPAQLK
Trigger: CTTCAGCTGCGCCGGCTCCAACACCAAGTACCGCCG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGAGCCGGCGGTACTaGGTGTTGGAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PRCFCESPGENRSLPGRSQSRRY*VLEPAQ
Trigger: CTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCTG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCGGGGCCCTCGTAGGGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGCAGAGCCGGCGGTACTaGGTGTTGGAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GGALVGEAKPDEEFGLAQQSRRY*VLEPAQ
Trigger: CTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCTG...CTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CAA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGAGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS GCA 90 bp GCCGCCGGCCCGGTGCAGCTCACTGCTGTTCTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCATCAGCTCCAGCAGGTCGCTCATCTT +
Preference number: 5 (lower is better)
Translates to: AAGPVQLTAVLQPGQ*VHALHHQLQQVAHL
Trigger: AAGATGAGCGACCTGCTGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 90 bp TGTCTGCGGGAAAGTGCAGGTCGCCGCCGGCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCAGTGCGTCCATGCGCTTCACCATCA +
Preference number: 5 (lower is better)
Translates to: CLRESAGRRRPGAAH*CSPAWPVRPCASPS
Trigger: TGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS CCA 90 bp TGGCGCAGGATCTGGTCCACCTTCACAGCGATGTCGGAGACGTTCTaGGCAATAGCCTGGATCCGCTCCATGAGGCCGGCCCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: WRRIWSTFTAMSETF*AIAWIRSMRPAPGG
Trigger: GCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAACGTCTCCGACATCGCTGTGAAGGTGGACCAGATCCTGCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 90 bp GAAGACGCAGCTTGGCCAGAGGAGGGGTGGTGCCCCTCTGCCATCTaGCATCCCATCCGGCTGGAGCTGCTGGGTCATCTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: EDAAWPEEGWCPSAI*HPIRLELLGHLLLL
Trigger: CAGCAGGAGGAGATGACCCAGCAGCTCCAGCCGGATGGGATGCCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CCA 90 bp GTTGCCTCTGGTGACCTGGAAGACGCAGCTTGGCCAGAGGAGGGGTaGTGCCCCTCTGCCATCTGGCATCCCATCCGGCTGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VASGDLEDAAWPEEG*CPSAIWHPIRLELL
Trigger: CAGCAGCTCCAGCCGGATGGGATGCCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCAGGTCGCTCATCTaGCGCAGGACGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRASRSLI*RRTPRD
Trigger: GTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGCT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGAGCAGTCAGGGAACTaGGGGTCACTGGGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GMLPPPIPGHGSPLPASREQSGN*GSLGAS
Trigger: TGAGGCACCCAGTGACCCCAAGTTCCCTGACTGCTC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGCGTACTCCTCGTGGTaGTACGCAGGTTCCGTCCCG +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPAYSSW*YAGSVP
Trigger: CGGGACGGAACCTGCGTACAACCACGAGGAGTACGC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCTGGCCTTGCCGCCTTaGATGAGCCGCTTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPLALPP*MSRFSV
Trigger: GACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGTCCACACGTGGGGCTaGCCGATGAAGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPVHTWG*PMKFSA
Trigger: CGCGGAGAACTTCATCGGCAAGCCCCACGTGTGGAC...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACAGGGCACCTGCAGCTaGAGGAAGGCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRQGTCS*RKASWL
Trigger: CAGCCAGGACGCCTTCCTCAAGCTGCAGGTGCCCTG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCGGGGCCCTCGTAGGGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGCAGGGCACCTGCAGCTaGAGGAAGGCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GGALVGEAKPDEEFGLAQQGTCS*RKASWL
Trigger: CAGCCAGGACGCCTTCCTCAAGCTGCAGGTGCCCTG...CTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CAA 90 bp GACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGTCCGGCGGTACTTGGTGTaGGAGCCGGCGCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: DPSGTVGQPGPCSSPLQVRRYLV*EPAQLK
Trigger: CTTCAGCTGCGCCGGCTCCAACACCAAGTACCGCCG...GACTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCAGAGCCGGCGGTACTaGGTGTTGGAGCCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: PAWPRCFCESPGENRSLPQSRRY*VLEPAQ
Trigger: CTGCGCCGGCTCCAACACCAAGTACCGCCGGCTCTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 90 bp TGGTCCACCTTCACAGCGATGTCGGAGACGTTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCGGCCCCAGGGGGCATCCTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: WSTFTAMSETFWAIA*IRSMRPAPGGILSA
Trigger: CGCAGACAGGATGCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAACGTCTCCGACATCGCTGTGAAGGTGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCCGGCACCGGTACTTCTaGAAGGAGAGTCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTRHRYF*KESPMC
Trigger: GCACATGGGACTCTCCTTCAAGAAGTACCGGTGCCG...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGCGTACTCCTCGTGGTaGTACGCAGGTTCCGTCCCG +
Preference number: 5 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAAYSSW*YAGSVP
Trigger: CGGGACGGAACCTGCGTACAACCACGAGGAGTACGC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCTGGCCTTGCCGCCTTaGATGAGCCGCTTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: PRCFCESPGENRSLPGRSLALPP*MSRFSV
Trigger: GACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCTGGCCTTGCCGCCTTaGATGAGCCGCTTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKLALPP*MSRFSV
Trigger: GACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGCCATGTTGCTGGCCTaGCCGCCTTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAAMLLA*PPLMSR
Trigger: GCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGATGCTCGCCTCCTaGCCGTACACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: PRCFCESPGENRSLPGRSQMLAS*PYTTAM
Trigger: CATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCAACCCGATGAAGAGTTaGGCCTTGCGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTNPMKS*ALRSSC
Trigger: GCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTCTCTGGAGGTGGGCTaGCCTCGGAAGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPSLEVG*PRKNSW
Trigger: CCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCGTCCACACGTGGGGCTaGCCGATGAAGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: PRCFCESPGENRSLPGRSVHTWG*PMKFSA
Trigger: CGCGGAGAACTTCATCGGCAAGCCCCACGTGTGGAC...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTGGCCCAGATCCGGCCTaGCACAAAGCCAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAGPDPA*HKARGL
Trigger: GAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCC...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCATCCACCACCTGGAGTaGCAGGTCATGCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTIHHLE*QVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGAT...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 90 bp ATCTTCCCATCGGGGTTGACGGTGATCATTGTTCAAACTTGTTGGTaGGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: IFPSGLTVIIVQTCW*EQPRARPDAPSWAQ
Trigger: CTGGGCCCAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS GCA 90 bp CCCGGTGCAGCTCACTGCTGTTCTCCAGCCTGGCCAGTGCGTCCATaGGCTTCACCATCAGCTCCAGCAGGTCGCTCATCTTGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: PGAAHCCSPAWPVRP*ASPSAPAGRSSCAG
Trigger: TCCTGCGCAAGATGAGCGACCTGCTGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 90 bp CTCGACAGAGTGACAGGTGCTGATCCTGCCTGGGAACTGCTGGCCTaGGGGAATGACAGCAGGGAGGGGTGCAGCGGAAGCCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: LDRVTGADPAWELLA*GNDSREGCSGSQCW
Trigger: CCAACACTGGCTTCCGCTGCACCCCTCCCTGCTGTCATTCCCGCAGGCCAGCAGTTCCCAGGCAGGATCAGCACCTGTCACTCTGTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGAGCAGTCAGGGAACTaGGGGTCACTGGGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAEQSGN*GSLGAS
Trigger: TGAGGCACCCAGTGACCCCAAGTTCCCTGACTGCTC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGGAGCAGTCAGGGAACTaGGGGTCACTGGGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKEQSGN*GSLGAS
Trigger: TGAGGCACCCAGTGACCCCAAGTTCCCTGACTGCTC...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCCGGCACCGGTACTTCTaGAAGGAGAGTCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPRHRYF*KESPMC
Trigger: GCACATGGGACTCTCCTTCAAGAAGTACCGGTGCCG...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGCGCTTCTCCGTCTCGTaGAGCTCCTCGGACACGAAG +
Preference number: 5 (lower is better)
Translates to: DASVSPQERTGACLGGPRRFSVS*SSSDTK
Trigger: CTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCG...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGCCATGTTGCTGGCCTaGCCGCCTTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: VARRTSSQGSEPAGAFSRAMLLA*PPLMSR
Trigger: GCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGCCATGTTGCTGGCCTaGCCGCCTTTGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAAMLLA*PPLMSR
Trigger: GCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTCAGATGCTCGCCTCCTaGCCGTACACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: PAWPRCFCESPGENRSLPQMLAS*PYTTAM
Trigger: CATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTG...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGCAGATGCTCGCCTCCTaGCCGTACACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: LLGHDASVSPQERTGACLQMLAS*PYTTAM
Trigger: CATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTG...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGAGGAAGATGCAACCATaGGCGATGGCCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: DASVSPQERTGACLGGPRRKMQP*AMASRG
Trigger: CCCCCTGGAGGCCATCGCCAATGGTTGCATCTTCCT...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGTCTCTGGAGGTGGGCTaGCCTCGGAAGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: DASVSPQERTGACLGGPRSLEVG*PRKNSW
Trigger: CCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGA...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGGTCCACACGTGGGGCTaGCCGATGAAGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAVHTWG*PMKFSA
Trigger: CGCGGAGAACTTCATCGGCAAGCCCCACGTGTGGAC...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCATCCACCACCTGGAGTaGCAGGTCATGCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPIHHLE*QVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGAT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp ACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTGCTTGGCCACGACTGGAAACCTGCCCCTaGGAGGGGGTAGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: TCSWAMRTLSSPTPAWPRLETCP*EGVGIE
Trigger: CTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAG...TCGTGGCCAAGCAGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 90 bp CCTGCCTGGGAACTGCTGGCCTGCGGGAATGACAGCAGGGAGGGGTaGAGCGGAAGCCAGTGTTGGCATCACCTTGAATGGCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PAWELLACGNDSREG*SGSQCWHHLEWPCS
Trigger: AGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCTGCACCCCTCCCTGCTGTCATTCCCGCAGGCCAGCAGTTCCCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 90 bp TGGTCCCGCCGGCCTTCTGACACCTTGCTGTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACCTTCACAGCGATGTCGGAGACGTTC +
Preference number: 5 (lower is better)
Translates to: WSRRPSDTLLCRSRL*RRIWSTFTAMSETF
Trigger: GAACGTCTCCGACATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCGGCGGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 90 bp TGCGCCCTAATCAGTCTCGACAGAGTGACAGGTGCTGATCCTGCCTaGGAACTGCTGGCCTGCGGGAATGACAGCAGGGAGGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CALISLDRVTGADPA*ELLACGNDSREGCS
Trigger: GCTGCACCCCTCCCTGCTGTCATTCCCGCAGGCCAGCAGTTCCCAGGCAGGATCAGCACCTGTCACTCTGTCGAGACTGATTAGGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS-3UTR CAA 90 bp CTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGACGGCCTTCTGACACCTaGCTGTGCAGGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: LGHDASVSPQERTGACLGRPSDT*LCRSRL
Trigger: CAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCG...TCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GTTGCGAGGAGGACAAGCAGCCAGGGCTCAGAACCTGCTGGTGCTTTCTCCCGCGAGCAGTCAGGGAACTaGGGGTCACTGGGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VARRTSSQGSEPAGAFSREQSGN*GSLGAS
Trigger: TGAGGCACCCAGTGACCCCAAGTTCCCTGACTGCTC...GCGGGAGAAAGCACCAGCAGGTTCTGAGCCCTGGCTGCTTGTCCTCCTCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGACCCTTCAGGGACCGTGGGGCAGCCTGGTCCCTGTTCCTCTCCCTTGCAAGCGGCACCGGTACTTCTaGAAGGAGAGTCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: WTLQGPWGSLVPVPLPCKRHRYF*KESPMC
Trigger: GCACATGGGACTCTCCTTCAAGAAGTACCGGTGCCG...CTTGCAAGGGAGAGGAACAGGGACCAGGCTGCCCCACGGTCCCTGAAGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCGGCACCGGTACTTCTaGAAGGAGAGTCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: PRCFCESPGENRSLPGRSRHRYF*KESPMC
Trigger: GCACATGGGACTCTCCTTCAAGAAGTACCGGTGCCG...GGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCGCTTCTCCGTCTCGTaGAGCTCCTCGGACACGAAG +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRARFSVS*SSSDTK
Trigger: CTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp AAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCAACCCGATGAAGAGTTaGGCCTTGCGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KHQWALCAWLPSQEKGEPNPMKS*ALRSSC
Trigger: GCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTT...GGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTAGGAAGATGCAACCATaGGCGATGGCCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PAWPRCFCESPGENRSLPRKMQP*AMASRG
Trigger: CCCCCTGGAGGCCATCGCCAATGGTTGCATCTTCCT...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAGGAAGATGCAACCATaGGCGATGGCCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: WGRRATRRRTARSRGGLRRKMQP*AMASRG
Trigger: CCCCCTGGAGGCCATCGCCAATGGTTGCATCTTCCT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGTCTCTGGAGGTGGGCTaGCCTCGGAAGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRASLEVG*PRKNSW
Trigger: CCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGA...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGTCTCTGGAGGTGGGCTaGCCTCGGAAGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: LLGHDASVSPQERTGACLSLEVG*PRKNSW
Trigger: CCACGAGTTCTTCCGAGGCAAGCCCACCTCCAGAGA...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGGCCTCCGACCACCTGCTCCTGGGCCATGCGGACTCTGAGCAGTCCGACACCTATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GPPTTCSWAMRTLSSPTPMPGWV*GEAQSE
Trigger: TTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCAT...AGGTGTCGGACTGCTCAGAGTCCGCATGGCCCAGGAGCAGGTGGTCGGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 90 bp CCACATCTGGCTTGCTCTTGGCTACTCCTCAGTCTCCTTTGCCTCTaGAGCTCCTTCAGGGAGACTGTGACCCGCAGGCCATGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PHLACSWLLLSLLCL*SSFRETVTRRPWPR
Trigger: CCTGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS GCA 90 bp GCCTTGCTCTGGACACAGAGATGTCCACAGGCAAACCCAGGGAGGTaGAGAGACACAGAAGGGGTGCCGGGCCCTGGTTTTCCATGGCTG +
Preference number: 5 (lower is better)
Translates to: ALLWTQRCPQANPGR*RDTEGVPGPGFPWL
Trigger: CAGCCATGGAAAACCAGGGCCCGGCACCCCTTCTGTGTCTCTGCACCTCCCTGGGTTTGCCTGTGGACATCTCTGTGTCCAGAGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 90 bp ATTATCTTCCCATCGGGGTTGACGGTGATCATTGTTCAAACTTGTTaGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: IIFPSGLTVIIVQTC*CEQPRARPDAPSWA
Trigger: GGCCCAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAGATAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CCA 90 bp TTCATCTGGGACAAGGTTGCCTCTGGTGACCTGGAAGACGCAGCTTaGCCAGAGGAGGGGTGGTGCCCCTCTGCCATCTGGCATCCCATC +
Preference number: 5 (lower is better)
Translates to: FIWDKVASGDLEDAA*PEEGWCPSAIWHPI
Trigger: GATGGGATGCCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGCAACCTTGTCCCAGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS-3UTR CAA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTCCCCGCTTCACATTTaGGGGACCGGGAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWSPLHI*GTGRRR
Trigger: GCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGGA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGCATTGTTCAAACTTGTaGGTGCGAGCAGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRAHCSNL*VRAAAG
Trigger: GCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATG...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CAA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGAGCAGGTCGCTCATCTaGCGCAGGACGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWSRSLI*RRTPRD
Trigger: GTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGCT...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAACCCGATGAAGAGTTaGGCCTTGCGCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WGRRATRRRTARSRGGLRNPMKS*ALRSSC
Trigger: GCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGTCCACACGTGGGGCTaGCCGATGAAGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RATRRRTARSRGGLRLEEVHTWG*PMKFSA
Trigger: CGCGGAGAACTTCATCGGCAAGCCCCACGTGTGGAC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCCCTCCACCAACTCTCAGCATCCCGGGGCTGCCTCCCGGGAAGGGTGGAGGAGGTTCTCATAATGGCCTaGATGGCTGCTTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: PLHQLSASRGCLPGRVEEVLIMA*MAASNS
Trigger: GGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAAC...CTCCTCCACCCTTCCCGGGAGGCAGCCCCGGGATGCTGAGAGTTGGTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCATGCCAGGATGGGTTTaGGGAGAAGCCCAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPMPGWV*GEAQSE
Trigger: TTCACTCTGGGCTTCTCCCAAAACCCATCCTGGCAT...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTCTGGAAACCTGCCCCTaGGAGGGGGTAGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGALETCP*EGVGIE
Trigger: CTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAG...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TGGGGCAGGCGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGAGATCCAGAGGCGGTTaGAGGCTGGAGGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: WGRRATRRRTARSRGGLRRSRGG*RLEEAG
Trigger: TCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATCT...CCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACGCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp ATCCCAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGATCCAGAGGCGGTTaGAGGCTGGAGGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: IPNTNGPCVPGSPHRRRARSRGG*RLEEAG
Trigger: TCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATCT...CGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CCA 90 bp GCCTGCGGGAATGACAGCAGGGAGGGGTGCAGCGGAAGCCAGTGTTaGCATCACCTTGAATGGCCTTGCTCTGGACACAGAGATGTCCAC +
Preference number: 5 (lower is better)
Translates to: ACGNDSREGCSGSQC*HHLEWPCSGHRDVH
Trigger: GTGGACATCTCTGTGTCCAGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCTGCACCCCTCCCTGCTGTCATTCCCGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAACGGCCTTCTGACACCTaGCTGTGCAGGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: RATRRRTARSRGGLRLEERPSDT*LCRSRL
Trigger: CAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCG...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGACGGCCTTCTGACACCTaGCTGTGCAGGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGRPSDT*LCRSRL
Trigger: CAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCG...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CAA 90 bp CCTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTTGGGCTGTGAGCCTCTaGGTCCGCTTCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: PAWPRCFCESPGENRSLPWAVSL*VRFFMK
Trigger: CTTCATGAAGAAGCGGACCAAGAGGCTCACAGCCCA...AGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAATACACCACGGCCATGTaGCTGGCCTTGCCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RATRRRTARSRGGLRLEEYTTAM*LALPPL
Trigger: CAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTA...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTTTCGCCACCTGGCCCAGATCCGGCCTTGCACAAAGCCAGGGGCCTCCGACCTGGATCTCCATGTATTaGTTCAGGATGCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PFATWPRSGLAQSQGPPTWISMY*FRMPRN
Trigger: GTTCCTGGGCATCCTGAACAAATACATGGAGATCCA...GGTCGGAGGCCCCTGGCTTTGTGCAAGGCCGGATCTGGGCCAGGTGGCGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCGGGTTCTCATAATGGCCTaGATGGCTGCTTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: GMLPPPIPGHGSPLPASRVLIMA*MAASNS
Trigger: GGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAAC...CCGGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCAGGGCACCTGCAGCTaGAGGAAGGCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWQGTCS*RKASWL
Trigger: CAGCCAGGACGCCTTCCTCAAGCTGCAGGTGCCCTG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGCGGCGGTACTTGGTGTaGGAGCCGGCGCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWRRYLV*EPAQLK
Trigger: CTTCAGCTGCGCCGGCTCCAACACCAAGTACCGCCG...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTATCCACCACCTGGAGTaGCAGGTCATGCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAIHHLE*QVMPGW
Trigger: CCATCCTGGCATGACCTGCAACTCCAGGTGGTGGAT...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGTAGGGATTGAGGCTTaGGAACAAATCCACCACCTG +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPVGIEA*EQIHHL
Trigger: CAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTAC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 90 bp GAGGGGTGCAGCGGAAGCCAGTGTTGGCATCACCTTGAATGGCCTTaGTCTGGACACAGAGATGTCCACAGGCAAACCCAGGGAGGTGCA +
Preference number: 5 (lower is better)
Translates to: EGCSGSQCWHHLEWP*SGHRDVHRQTQGGA
Trigger: TGCACCTCCCTGGGTTTGCCTGTGGACATCTCTGTGTCCAGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCTGCACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS GCA 90 bp GACGACGTTCCGCCTGCCACGAATCTCCTGCCGGAGGAGCCAGCCTaGCTGGCCTGGAAATTACCCCCATTAGGTCTAATTACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: DDVPPATNLLPEEPA*LAWKLPPLGLITGV
Trigger: CACACCTGTAATTAGACCTAATGGGGGTAATTTCCAGGCCAGGCAGGCTGGCTCCTCCGGCAGGAGATTCGTGGCAGGCGGAACGTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 90 bp CCTTCTGACACCTTGCTGTGCAGGAGCAGACTGTGGCGCAGGATCTaGTCCACCTTCACAGCGATGTCGGAGACGTTCTGGGCAATAGCC +
Preference number: 5 (lower is better)
Translates to: PSDTLLCRSRLWRRI*STFTAMSETFWAIA
Trigger: GGCTATTGCCCAGAACGTCTCCGACATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 90 bp AGCAGGGAGGGGTGCAGCGGAAGCCAGTGTTGGCATCACCTTGAATaGCCTTGCTCTGGACACAGAGATGTCCACAGGCAAACCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SREGCSGSQCWHHLE*PCSGHRDVHRQTQG
Trigger: TCCCTGGGTTTGCCTGTGGACATCTCTGTGTCCAGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCTGCACCCCTCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 90 bp CCGCCTGCCACGAATCTCCTGCCGGAGGAGCCAGCCTGCCTGGCCTaGAAATTACCCCCATTAGGTCTAATTACAGGTGTGCGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: PPATNLLPEEPACLA*KLPPLGLITGVRPN
Trigger: ATTAGGGCGCACACCTGTAATTAGACCTAATGGGGGTAATTTCCAGGCCAGGCAGGCTGGCTCCTCCGGCAGGAGATTCGTGGCAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS-3UTR CAA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGATCATTGTTCAAACTaGTTGGTGCGAGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: LLGHDASVSPQERTGACLDHCSN*LVRAAA
Trigger: CGCGGCTGCTCGCACCAACAAGTTTGAACAATGATC...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CAA 90 bp CCTAGGGTAAGTGGACAGGGCAACTGGAAACTGGGCAGGGCGTACCATGGGGCTTGGGCTGTGAGCCTCTaGGTCCGCTTCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: PRVSGQGNWKLGRAYHGAWAVSL*VRFFMK
Trigger: CTTCATGAAGAAGCGGACCAAGAGGCTCACAGCCCA...AGCCCCATGGTACGCCCTGCCCAGTTTCCAGTTGCCCTGTCCACTTACCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp TCGGCATGCTGCCTCCTCCTATTCCCGGGCACGGCTCTCCTCTGCCAGCTTCCCTGGATCTCCATGTATTaGTTCAGGATGCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SACCLLLFPGTALLCQLPWISMY*FRMPRN
Trigger: GTTCCTGGGCATCCTGAACAAATACATGGAGATCCA...GGGAAGCTGGCAGAGGAGAGCCGTGCCCGGGAATAGGAGGAGGCAGCATGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp AACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCCCGTTCTCATAATGGCCTaGATGGCTGCTTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: NTNGPCVPGSPHRRRASPVLIMA*MAASNS
Trigger: GGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAAC...GGGGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS-3UTR CAA 90 bp CAAACACCAATGGGCCCTGTGTGCCTGGCTCCCCTCACAGGAGAAGGGCGAGCCGTAGGGATTGAGGCTTaGGAACAAATCCACCACCTG +
Preference number: 5 (lower is better)
Translates to: QTPMGPVCLAPLTGEGRAVGIEA*EQIHHL
Trigger: CAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTAC...GGCTCGCCCTTCTCCTGTGAGGGGAGCCAGGCACACAGGGCCCATTGGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGGGAGGTCCCAGGGTAGGGATTGAGGCTTaGGAACAAATCCACCACCTG +
Preference number: 5 (lower is better)
Translates to: DASVSPQERTGACLGGPRVGIEA*EQIHHL
Trigger: CAGGTGGTGGATTTGTTCCAAAGCCTCAATCCCTAC...CCTGGGACCTCCCAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS TCA 90 bp CTGGCGGTACCCCTAAGTTACTCTGCAGCTCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCAGGACATAGAGTGCAGTCAGAATGT +
Preference number: 5 (lower is better)
Translates to: LAVPLSYSAAPSGRL*PAGHGPGHRVQSEC
Trigger: ACATTCTGACTGCACTCTATGTCCTGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGTAACTTAGGGGTACCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS GCA 90 bp ATGACTCCACATCTGGCTTGCTCTTGGCTACTCCTCAGTCTCCTTTaGCTCTGCAGCTCCTTCAGGGAGACTGTGACCCGCAGGCCATGG +
Preference number: 5 (lower is better)
Translates to: MTPHLACSWLLLSLL*LCSSFRETVTRRPW
Trigger: CCATGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS-3UTR CAA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATCCCCGCTTCACATTTaGGGGACCGGGAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRSPLHI*GTGRRR
Trigger: GCGCCGCCTCCCGGTCCCCAAAATGTGAAGCGGGGA...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CAA 90 bp TTGGGTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCAGCAGGTCGCTCATCTaGCGCAGGACGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: LGGRNALWAVPQCGPNLLSRSLI*RRTPRD
Trigger: GTCCCGCGGCGTCCTGCGCAAGATGAGCGACCTGCT...GAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CAA 90 bp GGGCTTGCCGATGAAGTTCTCCGCGTAGGGATGCTGGGAGAACACCTCTCTGGATGGGCTGTGAGCCTCTaGGTCCGCTTCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: GLADEVLRVGMLGEHLSGWAVSL*VRFFMK
Trigger: CTTCATGAAGAAGCGGACCAAGAGGCTCACAGCCCA...TCCAGAGAGGTGTTCTCCCAGCATCCCTACGCGGAGAACTTCATCGGCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565043.5
CDS-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAATGGGCTGTGAGCCTCTaGGTCCGCTTCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: RATRRRTARSRGGLRLEEWAVSL*VRFFMK
Trigger: CTTCATGAAGAAGCGGACCAAGAGGCTCACAGCCCA...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GAGAGAGAAACAATTCAACCAGGGTCTGGGTGGTCCCTACACCCCCAACTGTGGTACACCACGGCCATGTaGCTGGCCTTGCCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: ERETIQPGSGWSLHPQLWYTTAM*LALPPL
Trigger: CAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTA...CCACAGTTGGGGGTGTAGGGACCACCCAGACCCTGGTTGAATTGTTTCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCCTGGAAACCTGCCCCTaGGAGGGGGTAGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: GLETCPLEGVGIEALEQILETCP*EGVGIE
Trigger: CTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAG...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS TCA 90 bp GGGAAGCCAAACCCGATGAAGAGTTTGGCCTTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAGAGGCCGTGGTTCTTCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GKPNPMKSLALRSSC*NSGCGKRPWFFTKA
Trigger: AGCCTTTGTGAAGAACCACGGCCTCTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTTTGGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS TCA 90 bp TACTCCTCAGTCTCCTTTGCCTCTGCAGCTCCTTCAGGGAGACTGTaGCCCGCAGGCCATGGCCCAGGACATAGAGTGCAGTCAGAATGT +
Preference number: 5 (lower is better)
Translates to: YSSVSFASAAPSGRL*PAGHGPGHRVQSEC
Trigger: ACATTCTGACTGCACTCTATGTCCTGGGCCATGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS-3UTR CAA 90 bp CGTGCCACTCGGAGAAGGACAGCTAGATCCAGAGGCGGTTTGAGGCTGGAGGAAGATCATTGTTCAAACTaGTTGGTGCGAGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: RATRRRTARSRGGLRLEEDHCSN*LVRAAA
Trigger: CGCGGCTGCTCGCACCAACAAGTTTGAACAATGATC...TTCCTCCAGCCTCAAACCGCCTCTGGATCTAGCTGTCCTTCTCCGAGTGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000569840.7
CDS-3UTR CAA 90 bp CTGCTTGGCCACGATGCTTCTGTGAGTCCCCAGGAGAGAACCGGAGCCTGCCTGTGGATCTCCATGTATTaGTTCAGGATGCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LLGHDASVSPQERTGACLWISMY*FRMPRN
Trigger: GTTCCTGGGCATCCTGAACAAATACATGGAGATCCA...CAGGCAGGCTCCGGTTCTCTCCTGGGGACTCACAGAAGCATCGTGGCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS TCA 90 bp TGCTGGCCACATCTCCTTCTAGAAGCATCTTCTCACAGGCACCCATaGCTCCACATCTGGCTTGCTCTTGGCTACTCCTCAGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CWPHLLLEASSHRHP*LHIWLALGYSSVSF
Trigger: AAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCATGGGTGCCTGTGAGAAGATGCTTCTAGAAGGAGATGTGGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS CCA 90 bp GTACCCCTAAGTTACTGCCGGGTTATTTACACACAGGTTTTCATCTaGGACAAGGTTGCCTCTGGTGACCTGGAAGACGCAGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VPLSYCRVIYTQVFI*DKVASGDLEDAAWP
Trigger: TGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGCAACCTTGTCCCAGATGAAAACCTGTGTGTAAATAACCCGGCAGTAACTTAGGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS-3UTR CAA 90 bp GGACTGGAAACCTGCCCCTTGGAGGGGGTAGGGATTGAGGCTTTGGAACAAATCGTTCTCATAATGGCCTaGATGGCTGCTTCAAACTCC +
Preference number: 5 (lower is better)
Translates to: GLETCPLEGVGIEALEQIVLIMA*MAASNS
Trigger: GGAGTTTGAAGCAGCCATCAAGGCCATTATGAGAAC...GATTTGTTCCAAAGCCTCAATCCCTACCCCCTCCAAGGGGCAGGTTTCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS-3UTR CAA 90 bp AATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGATTCACAAACATTGTTCAAACTTGTaGGTGCGAGCAGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: NALWAVPQCGPNLLQIHKHCSNL*VRAAAG
Trigger: GCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATG...TTTGTGAATCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS-3UTR CAA 90 bp GTGGTAGAAATGCACTCTGGGCTGTACCACAGTGTGGTCCAAATCTTCTCCAGAGATCATTGTTCAAACTaGTTGGTGCGAGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: VVEMHSGLYHSVVQIFSRDHCSN*LVRAAA
Trigger: CGCGGCTGCTCGCACCAACAAGTTTGAACAATGATC...TCTGGAGAAGATTTGGACCACACTGTGGTACAGCCCAGAGTGCATTTCTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565675.1
CDS GCA 72 bp GAGCGAAGCTGGGAGCGCGCGGCCCGGTGGCCTCGCTaGTCAGGCCTGGGCGTGCAGCGGAGGGAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: ERSWERAARWPR*SGLGVQRRERR
Trigger: GCGCCGCTCCCTCCGCTGCACGCCCAGGCCTGAGCAGCGAGGCCACCGGGCCGCGCGCTCCCAGCTTCGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CCA 72 bp TGCGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTaGGCCCAGCTCTCGCCGCGTCCGGGCCACGAACCC +
Preference number: 6 (lower is better)
Translates to: CEQPRARPDAPS*AQLSPRPGHEP
Trigger: GGGTTCGTGGCCCGGACGCGGCGAGAGCTGGGCCCAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp GGCCCAGCTCTCGCCGCGTCCGGGCCACGAACCCTCTaGGGGCCGAAGCCGCGTCCGAGCGAAGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: GPALAASGPRTL*GPKPRPSEAGS
Trigger: GCTCCCAGCTTCGCTCGGACGCGGCTTCGGCCCGCAGAGGGTTCGTGGCCCGGACGCGGCGAGAGCTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp AGGCCGGCCCCAGGGGGCATCCTGTCTGCGGGAAAGTaGAGGTCGCCGCCGGCCCGGTGCAGCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: RPAPGGILSAGK*RSPPARCSSLL
Trigger: CAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAGGATGCCCCCTGGGGCCGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CAA 90 bp GGGCGGGAGAAGGCCCAGCCGTCGGGGGCCCTGCCATGCTCGGCATaGGGGGTGGAGGTCTGGTGGGCTCTCACATCCTGTGCCATGCCC +
Preference number: 6 (lower is better)
Translates to: GREKAQPSGALPCSA*GVEVWWALTSCAMP
Trigger: GGGCATGGCACAGGATGTGAGAGCCCACCAGACCTCCACCCCCAATGCCGAGCATGGCAGGGCCCCCGACGGCTGGGCCTTCTCCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568598.1
CDS GCA 72 bp CTGTCTGCGGGAAAGTGCAGGTCGCCGCCGGCCCGGTaGAGCTCACTGCTGTTCTCCAGCCTGGCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: LSAGKCRSPPAR*SSLLFSSLASA
Trigger: CGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTCCCGCAGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp GAAAGTGCAGGTCGCCGCCGGCCCGGTGCAGCTCACTaGTGTTCTCCAGCCTGGCCAGTGCGTCCATGCGCT +
Preference number: 6 (lower is better)
Translates to: ESAGRRRPGAAH*CSPAWPVRPCA
Trigger: AGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGCGACCTGCACTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp GGGGTCTACGGCCAACGACGACGACGACGTTCCGCCTaGCACGAATCTCCTGCCGGAGGAGCCAGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: GVYGQRRRRRSA*HESPAGGASLP
Trigger: AGGCAGGCTGGCTCCTCCGGCAGGAGATTCGTGGCAGGCGGAACGTCGTCGTCGTCGTTGGCCGTAGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 72 bp GCCCTGCCATGCTCGGCATTGGGGGTGGAGGTCTGGTaGGCTCTCACATCCTGTGCCATGCCCAGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: ALPCSALGVEVW*ALTSCAMPREP
Trigger: CGGCTCCCTGGGCATGGCACAGGATGTGAGAGCCCACCAGACCTCCACCCCCAATGCCGAGCATGGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568598.1
CDS CCA 72 bp AGCCGTCGGGGGCCCTGCCATGCTCGGCATTGGGGGTaGAGGTCTGGTGGGCTCTCACATCCTGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: SRRGPCHARHWG*RSGGLSHPVPC
Trigger: GCATGGCACAGGATGTGAGAGCCCACCAGACCTCCACCCCCAATGCCGAGCATGGCAGGGCCCCCGACGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568598.1
CDS GCA 72 bp GACCTGGAAGACGCAGCTTGGCCAGAGGAGGGGTGGTaGCCCTCTGCCATCTGGCATCCCATCCGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: DLEDAAWPEEGW*PSAIWHPIRLE
Trigger: CTCCAGCCGGATGGGATGCCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CCA 72 bp CGCCGGCCCGGTGCAGCTCACTGCTGTTCTCCAGCCTaGCCAGTGCGTCCATGCGCTTCACCATCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: RRPGAAHCCSPA*PVRPCASPSAP
Trigger: TGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS CCA 72 bp GTGAATGGCGAGTCCCCCAGGCGCCGGGCCGAGAACTaGCCTCCCAGAGACGTCATCAGGAAGCAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: VNGESPRRRAEN*PPRDVIRKQRV
Trigger: CACTCTCTGCTTCCTGATGACGTCTCTGGGAGGCCAGTTCTCGGCCCGGCGCCTGGGGGACTCGCCATTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp CCGGTGCAGCTCACTGCTGTTCTCCAGCCTGGCCAGTaGGTCCATGCGCTTCACCATCAGCTCCAGCAGGTC +
Preference number: 6 (lower is better)
Translates to: PVQLTAVLQPGQ*VHALHHQLQQV
Trigger: GACCTGCTGGAGCTGATGGTGAAGCGCATGGACGCACTGGCCAGGCTGGAGAACAGCAGTGAGCTGCACCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp TCTCCTTCCCCTGGAGCTTCCAGATGCTCGCCTCCTTaGCGTACACCACGGCCATGTTGCTGGCCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: SPSPGASRCSPP*RTPRPCCWPCR
Trigger: GCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGCTCCAGGGGAAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569840.7
CDS CCA 72 bp CCATCGGGGTTGACGGTGATCATTGTTCAAACTTGTTaGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACCG +
Preference number: 6 (lower is better)
Translates to: PSGLTVIIVQTC*CEQPRARPDAP
Trigger: CGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CCA 72 bp TTCACAGCGATGTCGGAGACGTTCTGGGCAATAGCCTaGATCCGCTCCATGAGGCCGGCCCCAGGGGGCATC +
Preference number: 6 (lower is better)
Translates to: FTAMSETFWAIA*IRSMRPAPGGI
Trigger: GATGCCCCCTGGGGCCGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAACGTCTCCGACATCGCTGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 72 bp TCCAGTAGCCCCAGTTGGTCCGGTAGCCGTGCAGCGTaGCGTACTCCTCGTGGTTGTACGCAGGTTCCGTCC +
Preference number: 6 (lower is better)
Translates to: SSSPSWSGSRAA*RTPRGCTQVPS
Trigger: GGACGGAACCTGCGTACAACCACGAGGAGTACGCCACGCTGCACGGCTACCGGACCAACTGGGGCTACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 72 bp GACAAGGTTGCCTCTGGTGACCTGGAAGACGCAGCTTaGCCAGAGGAGGGGTGGTGCCCCTCTGCCATCTGG +
Preference number: 6 (lower is better)
Translates to: DKVASGDLEDAA*PEEGWCPSAIW
Trigger: CCAGATGGCAGAGGGGCACCACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGCAACCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CAA 72 bp CCCATCGGGGTTGACGGTGATCATTGTTCAAACTTGTaGGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACC +
Preference number: 6 (lower is better)
Translates to: PIGVDGDHCSNL*VRAAAGEAGRT
Trigger: GGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CAA 90 bp GCCTCCTTGCCGTACACCACGGCCATGTTGCTGGCCTTGCCGCCTTaGATGAGCCGCTTCTCCGTCTCGTTGAGCTCCTCGGACACGAAG +
Preference number: 6 (lower is better)
Translates to: ASLPYTTAMLLALPP*MSRFSVSLSSSDTK
Trigger: CTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 90 bp CAGATGCTCGCCTCCTTGCCGTACACCACGGCCATGTTGCTGGCCTaGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTTGAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: QMLASLPYTTAMLLA*PPLMSRFSVSLSSS
Trigger: CGAGGAGCTCAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS GCA 72 bp GGAACTTCTCCTTCCCCTTCCAGATGCTCGCCTCCTTaGCGTACACCACGGCCATGTTGCTGGCCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: GTSPSPSRCSPP*RTPRPCCWPCR
Trigger: GCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGGGGAAGGAGAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000428789.6
CDS CAA 72 bp CTTCCCATCGGGGTTGACGGTGATCATTGTTCAAACTaGTTGGTGCGAGCAGCCGCGGGCGAGGCCGGACGC +
Preference number: 6 (lower is better)
Translates to: LPIGVDGDHCSN*LVRAAAGEAGR
Trigger: GCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CAA 72 bp CCGTACACCACGGCCATGTTGCTGGCCTTGCCGCCTTaGATGAGCCGCTTCTCCGTCTCGTTGAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PYTTAMLLALPP*MSRFSVSLSSS
Trigger: CGAGGAGCTCAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 72 bp GCCTCCTTGCCGTACACCACGGCCATGTTGCTGGCCTaGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: ASLPYTTAMLLA*PPLMSRFSVSL
Trigger: CAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 72 bp CAGATGCTCGCCTCCTTGCCGTACACCACGGCCATGTaGCTGGCCTTGCCGCCTTTGATGAGCCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QMLASLPYTTAM*LALPPLMSRFS
Trigger: GGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 72 bp TTCTCCTTCCCCTGGAGCTTCCAGATGCTCGCCTCCTaGCCGTACACCACGGCCATGTTGCTGGCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: FSFPWSFQMLAS*PYTTAMLLALP
Trigger: CGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGCTCCAGGGGAAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569840.7
CDS CAA 90 bp CATTATCTTCCCATCGGGGTTGACGGTGATCATTGTTCAAACTTGTaGGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: HYLPIGVDGDHCSNL*VRAAAGEAGRTVLG
Trigger: GCCCAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAGATAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CAA 90 bp TTCCCCTTCCAGATGCTCGCCTCCTTGCCGTACACCACGGCCATGTaGCTGGCCTTGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: FPFQMLASLPYTTAM*LALPPLMSRFSVSL
Trigger: CAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000428789.6
CDS CAA 90 bp TGGAGCTTCCAGATGCTCGCCTCCTTGCCGTACACCACGGCCATGTaGCTGGCCTTGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: WSFQMLASLPYTTAM*LALPPLMSRFSVSL
Trigger: CAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569840.7
CDS CCA 72 bp ATCTGGTCCACCTTCACAGCGATGTCGGAGACGTTCTaGGCAATAGCCTGGATCCGCTCCATGAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: IWSTFTAMSETF*AIAWIRSMRPA
Trigger: GGCCGGCCTCATGGAGCGGATCCAGGCTATTGCCCAGAACGTCTCCGACATCGCTGTGAAGGTGGACCAGAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CCA 72 bp CGGCCTTCTGACACCTTGCTGTGCAGGAGCAGACTGTaGCGCAGGATCTGGTCCACCTTCACAGCGATGTCG +
Preference number: 6 (lower is better)
Translates to: RPSDTLLCRSRL*RRIWSTFTAMS
Trigger: CGACATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCACAGCAAGGTGTCAGAAGGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CAA 72 bp AGGAACTTCTCCTTCCCCTTCCAGATGCTCGCCTCCTaGCCGTACACCACGGCCATGTTGCTGGCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: RNFSFPFQMLAS*PYTTAMLLALP
Trigger: CGGCAAGGCCAGCAACATGGCCGTGGTGTACGGCAAGGAGGCGAGCATCTGGAAGGGGAAGGAGAAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301618.8
ENST00000428789.6
CDS CAA 90 bp GACCATTATCTTCCCATCGGGGTTGACGGTGATCATTGTTCAAACTaGTTGGTGCGAGCAGCCGCGGGCGAGGCCGGACGCACCGTCCTG +
Preference number: 6 (lower is better)
Translates to: DHYLPIGVDGDHCSN*LVRAAAGEAGRTVL
Trigger: CAGGACGGTGCGTCCGGCCTCGCCCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAGATAATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS GCA 72 bp GCTTGCTCTTGGCTACTCCTCAGTCTCCTTTGCCTCTaGAGCTCCTTCAGGGAGACTGTGACCCGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: ACSWLLLSLLCL*SSFRETVTRRP
Trigger: TGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS GCA 72 bp CCGCCTGCCACGAATCTCCTGCCGGAGGAGCCAGCCTaGCTGGCCTGGAAATTACCCCCATTAGGTCTAATT +
Preference number: 6 (lower is better)
Translates to: PPATNLLPEEPA*LAWKLPPLGLI
Trigger: AATTAGACCTAATGGGGGTAATTTCCAGGCCAGGCAGGCTGGCTCCTCCGGCAGGAGATTCGTGGCAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 72 bp ACCTTGCTGTGCAGGAGCAGACTGTGGCGCAGGATCTaGTCCACCTTCACAGCGATGTCGGAGACGTTCTGG +
Preference number: 6 (lower is better)
Translates to: TLLCRSRLWRRI*STFTAMSETFW
Trigger: CCAGAACGTCTCCGACATCGCTGTGAAGGTGGACCAGATCCTGCGCCACAGTCTGCTCCTGCACAGCAAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CAA 72 bp GCCTTGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTaGAGCTCCTCGGACACGAAGCCCATGAAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: ALPPLMSRFSVS*SSSDTKPMKEL
Trigger: CAACTCCTTCATGGGCTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 90 bp ATGTTGCTGGCCTTGCCGCCTTTGATGAGCCGCTTCTCCGTCTCGTaGAGCTCCTCGGACACGAAGCCCATGAAGGAGTTGTCGGGGGTA +
Preference number: 6 (lower is better)
Translates to: MLLALPPLMSRFSVS*SSSDTKPMKELSGV
Trigger: TACCCCCGACAACTCCTTCATGGGCTTCGTGTCCGAGGAGCTCAACGAGACGGAGAAGCGGCTCATCAAAGGCGGCAAGGCCAGCAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000569840.7
CDS CAA 90 bp CATGACTCCACATCTGGCTTGCTCTTGGCTACTCCTCAGTCTCCTTaGCCTCTGCAGCTCCTTCAGGGAGACTGTGACCCGCAGGCCATG +
Preference number: 6 (lower is better)
Translates to: HDSTSGLLLATPQSP*PLQLLQGDCDPQAM
Trigger: CATGGCCTGCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS CAA 90 bp ATGACAGCAGGGAGGGGTGCAGCGGAAGCCAGTGTTGGCATCACCTaGAATGGCCTTGCTCTGGACACAGAGATGTCCACAGGCAAACCC +
Preference number: 6 (lower is better)
Translates to: MTAGRGAAEASVGIT*NGLALDTEMSTGKP
Trigger: GGGTTTGCCTGTGGACATCTCTGTGTCCAGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCTGCACCCCTCCCTGCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS GCA 72 bp CATCTGGCTTGCTCTTGGCTACTCCTCAGTCTCCTTTaGCTCTGCAGCTCCTTCAGGGAGACTGTGACCCGC +
Preference number: 6 (lower is better)
Translates to: HLACSWLLLSLL*LCSSFRETVTR
Trigger: GCGGGTCACAGTCTCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS GCA 72 bp CATCCGTACAAACCAGCTCCTCCCGCCAGAAGCCCCTaGTTATTCCAACTCCACAGCCTCGGTTTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: HPYKPAPPARSP*LFQLHSLGFSP
Trigger: AGGGGAGAAACCGAGGCTGTGGAGTTGGAATAAGCAGGGGCTTCTGGCGGGAGGAGCTGGTTTGTACGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CCA 72 bp AGGGACTCCTTCCCGCTGCCCATCAGGTCCAGAAGGTaGGACAGGTTGCTTCGGAAAACTGCCTGGACTTTG +
Preference number: 6 (lower is better)
Translates to: RDSFPLPIRSRR*DRLLRKTAWTL
Trigger: CAAAGTCCAGGCAGTTTTCCGAAGCAACCTGTCCCACCTTCTGGACCTGATGGGCAGCGGGAAGGAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS TCA 72 bp AACCCGATGAAGAGTTTGGCCTTGCGCAGCAGCTGCTaGAACTCAGGCTGCGGTAAGAGGCCGTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: NPMKSLALRSSC*NSGCGKRPWFF
Trigger: GAAGAACCACGGCCTCTTACCGCAGCCTGAGTTTCAGCAGCTGCTGCGCAAGGCCAAACTCTTCATCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000428789.6
ENST00000565043.5
ENST00000569840.7
CDS CAA 72 bp CTCACAGGCACCCATGACTCCACATCTGGCTTGCTCTaGGCTACTCCTCAGTCTCCTTTGCCTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LTGTHDSTSGLL*ATPQSPLPLQL
Trigger: GAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCATGGGTGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS GCA 72 bp AGCGGAAGCCAGTGTTGGCATCACCTTGAATGGCCTTaGTCTGGACACAGAGATGTCCACAGGCAAACCCAG +
Preference number: 6 (lower is better)
Translates to: SGSQCWHHLEWP*SGHRDVHRQTQ
Trigger: CTGGGTTTGCCTGTGGACATCTCTGTGTCCAGAGCAAGGCCATTCAAGGTGATGCCAACACTGGCTTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563153.5
CDS CCA 72 bp GGACAGGAGGACATGGAAGGACATGACCACACCCCATaGCTTCCTCTAGAATCCCCACATCTGCTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GQEDMEGHDHTP*LPLESPHLLSP
Trigger: TGGACTGAGCAGATGTGGGGATTCTAGAGGAAGCCATGGGGTGTGGTCATGTCCTTCCATGTCCTCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CAA 90 bp CTCAGGGTGACCAGGCATCTTCTGACCATTATCTTCCCATCGGGGTaGACGGTGATCATTGTTCAAACTTGTTGGTGCGAGCAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: LRVTRHLLTIIFPSG*TVIIVQTCWCEQPR
Trigger: CCGCGGCTGCTCGCACCAACAAGTTTGAACAATGATCACCGTCAACCCCGATGGGAAGATAATGGTCAGAAGATGCCTGGTCACCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301618.8
ENST00000374998.3
ENST00000565675.1
ENST00000569840.7
CDS CAA 90 bp AAGCATCTTCTCACAGGCACCCATGACTCCACATCTGGCTTGCTCTaGGCTACTCCTCAGTCTCCTTTGCCTCTGCAGCTCCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: KHLLTGTHDSTSGLL*ATPQSPLPLQLLQG
Trigger: TCCCTGAAGGAGCTGCAGAGGCAAAGGAGACTGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCATGGGTGCCTGTGAGAAGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS CAA 90 bp GTTACTGCCGGGTTATTTACACACAGGTTTTCATCTGGGACAAGGTaGCCTCTGGTGACCTGGAAGACGCAGCTTGGCCAGAGGAGGGGT +
Preference number: 6 (lower is better)
Translates to: VTAGLFTHRFSSGTR*PLVTWKTQLGQRRG
Trigger: ACCCCTCCTCTGGCCAAGCTGCGTCTTCCAGGTCACCAGAGGCAACCTTGTCCCAGATGAAAACCTGTGTGTAAATAACCCGGCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS TCA 72 bp TCACTTATTCATTCAGTTAAGTCTATGCCGAGCCCCTaGGTCAGGTGGGATGTACCGTCCTCCGCAGAGACG +
Preference number: 6 (lower is better)
Translates to: SLIHSVKSMPSP*VRWDVPSSAET
Trigger: CGTCTCTGCGGAGGACGGTACATCCCACCTGACTCAGGGGCTCGGCATAGACTTAACTGAATGAATAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS TCA 72 bp CATCTCCTTCTAGAAGCATCTTCTCACAGGCACCCATaGCTCCACATCTGGCTTGCTCTTGGCTACTCCTCA +
Preference number: 6 (lower is better)
Translates to: HLLLEASSHRHP*LHIWLALGYSS
Trigger: TGAGGAGTAGCCAAGAGCAAGCCAGATGTGGAGTCATGGGTGCCTGTGAGAAGATGCTTCTAGAAGGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS CCA 72 bp AGTTACTGCCGGGTTATTTACACACAGGTTTTCATCTaGGACAAGGTTGCCTCTGGTGACCTGGAAGACGCA +
Preference number: 6 (lower is better)
Translates to: SYCRVIYTQVFI*DKVASGDLEDA
Trigger: TGCGTCTTCCAGGTCACCAGAGGCAACCTTGTCCCAGATGAAAACCTGTGTGTAAATAACCCGGCAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563627.1
CDS CAA 90 bp CATTTTTCAGTCTCCTTCTTACTTGGCTTTTCAATGAGCAATGTGTaGCTGGCCACATCTCCTTCTAGAAGCATCTTCTCACAGGCACCC +
Preference number: 6 (lower is better)
Translates to: HFSVSFLLGFSMSNV*LATSPSRSIFSQAP
Trigger: GGGTGCCTGTGAGAAGATGCTTCTAGAAGGAGATGTGGCCAGCAACACATTGCTCATTGAAAAGCCAAGTAAGAAGGAGACTGAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374998.3
CDS CAA 72 bp GTCTCCTTCTTACTTGGCTTTTCAATGAGCAATGTGTaGCTGGCCACATCTCCTTCTAGAAGCATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VSFLLGFSMSNV*LATSPSRSIFS
Trigger: TGAGAAGATGCTTCTAGAAGGAGATGTGGCCAGCAACACATTGCTCATTGAAAAGCCAAGTAAGAAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374998.3