RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000152127

Ensembl transcript IDs: ENST00000281923.4, ENST00000409645.5, ENST00000468758.1, ENST00000481801.5, ENST00000488365.1

Found 935 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGGGTGCTTGGAAGCCCCGGCACAGAGCACATCATTGAGCGACTaGGGCGCCCAGCAGAGGCCAAGTGGAGGACGCCAACCGCTCACA +
Preference number: 1 (lower is better)
Translates to: EGCLEAPAQSTSLSD*GAQQRPSGGRQPLT
Trigger: TGTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGTGCTCTGTGCCGGGGCTTCCAAGCACCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp GTTAGCAGGAAGGGTGCTTGGAAGCCCCGGCACAGAGCACATCATTaGGCGACTGAGGCGCCCAGCAGAGGCCAAGTGGAGGACGCCAAC +
Preference number: 1 (lower is better)
Translates to: VSRKGAWKPRHRAHH*ATEAPSRGQVEDAN
Trigger: GTTGGCGTCCTCCACTTGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGTGCTCTGTGCCGGGGCTTCCAAGCACCCTTCCTGCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp TCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTaGCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: SHSESYQPLRLAHQF*PAEAPLGRPLLAGR
Trigger: CCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp ACAGAGCACATCATTGAGCGACTGAGGCGCCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTG +
Preference number: 1 (lower is better)
Translates to: TEHIIERLRRPAEAK*RTPTAHIRQKGSHL
Trigger: CAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGTGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp AAAAGCCAGCACCAGATTCCCACCTTTGCGAGCTACACCCTCAGGTaGGTAGCCAGGACAGGGCACTGCATTCATCCTGAGCTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: KSQHQIPTFASYTLR*VARTGHCIHPELPP
Trigger: TGGGGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGCTACTCACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGTGCTGGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp GATGCACCCATTCACATGATTCTGCCTCAGCCACACCTCAGCAAGTaGGTGGGTGGCAGGGAACACAGGCTGGTTGACACGTTGGCAACC +
Preference number: 1 (lower is better)
Translates to: DAPIHMILPQPHLSK*VGGREHRLVDTLAT
Trigger: GGTTGCCAACGTGTCAACCAGCCTGTGTTCCCTGCCACCCACGCACTTGCTGAGGTGTGGCTGAGGCAGAATCATGTGAATGGGTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp TCCCCCTGTTGGTCAGATACTTGCATTGACATCCTCAGTGTTCAATaGTCCTGGAAGAGCCCAGGAGAGGGCGGCACTGGCCCAGGGATT +
Preference number: 1 (lower is better)
Translates to: SPCWSDTCIDILSVQ*SWKSPGEGGTGPGI
Trigger: AATCCCTGGGCCAGTGCCGCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp TGCCCTAAACAACTGGAGTGTGGGCTTGTTTGCTCCAAGAGCAGCTaGCCTGTCAGTGGAACTCCGGCGCACTTCCACTCAATACTGGAC +
Preference number: 1 (lower is better)
Translates to: CPKQLECGLVCSKSS*PVSGTPAHFHSILD
Trigger: GTCCAGTATTGAGTGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTGTTTAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp TGTTGGTCAGATACTTGCATTGACATCCTCAGTGTTCAATGCTCCTaGAAGAGCCCAGGAGAGGGCGGCACTGGCCCAGGGATTGCAGGT +
Preference number: 1 (lower is better)
Translates to: CWSDTCIDILSVQCS*KSPGEGGTGPGIAG
Trigger: ACCTGCAATCCCTGGGCCAGTGCCGCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp GCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGAAATaGTGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGC +
Preference number: 1 (lower is better)
Translates to: AAVTVFPQLLLEKQK*CCARDKPGSWPDIR
Trigger: GCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp TTGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTaGGAAACAGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTG +
Preference number: 1 (lower is better)
Translates to: LPWSSCSDSLPTVAP*ETEMMLCQGQARLL
Trigger: CAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp AGTCCCAAGGTAGACCCAAAGGTATGGCAGAATCCAGCCCTTTCTTaGGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTGGAAGTGCA +
Preference number: 1 (lower is better)
Translates to: SPKVDPKVWQNPALS*GSQGFTPSSVGGSA
Trigger: TGCACTTCCACCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTACCTTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp TTAAACTTTGCTCGGCCTGCAGGCTCCCCCTGTTGGTCAGATACTTaGATTGACATCCTCAGTGTTCAATGCTCCTGGAAGAGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: LNFARPAGSPCWSDT*IDILSVQCSWKSPG
Trigger: TCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp TGGCTAAGTGGGTTAAACTTTGCTCGGCCTGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGACATCCTCAGTGTTCAATGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: WLSGLNFARPAGSPC*SDTCIDILSVQCSW
Trigger: CCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTTAACCCACTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp GCCAACCTGATGACTGATTACTCAACAAGTCAGAGTGATCCTGCCTaGAGGAAAAGCCAGCACCAGATTCCCACCTTTGCGAGCTACACC +
Preference number: 1 (lower is better)
Translates to: ANLMTDYSTSQSDPA*RKSQHQIPTFASYT
Trigger: GGTGTAGCTCGCAAAGGTGGGAATCTGGTGCTGGCTTTTCCTTCAGGCAGGATCACTCTGACTTGTTGAGTAATCAGTCATCAGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp AACTCTAGTCCCCATGAAGCGGAATTCTTCCTTTCCCTCACATTCTaGAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: NSSPHEAEFFLSLTF*KLPAITPCPSVLPS
Trigger: GCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGGAAGAATTCCGCTTCATGGGGACTAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp AAGCTAGGTAAACCACCTTGGAGAAATGGGGTGGCCACCGTGGTCTaGCCTAAAAGGCACACACCTACCTACAGACATACAGTTTCAGTC +
Preference number: 1 (lower is better)
Translates to: KLGKPPWRNGVATVV*PKRHTPTYRHTVSV
Trigger: GACTGAAACTGTATGTCTGTAGGTAGGTGTGTGCCTTTTAGGGCAGACCACGGTGGCCACCCCATTTCTCCAAGGTGGTTTACCTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp GGGAGTGTCTTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTaGAGATGGGAAATTCCAGTCACTGCATCCACAGGACGAGACTGC +
Preference number: 1 (lower is better)
Translates to: GSVLRLHKIWATEML*RWEIPVTASTGRDC
Trigger: GCAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAAGACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp ACACATTCAGGGGTCACTGACTCTTCAGATAATGCCCTAAACAACTaGAGTGTGGGCTTGTTTGCTCCAAGAGCAGCTGCCCTGTCAGTG +
Preference number: 1 (lower is better)
Translates to: THSGVTDSSDNALNN*SVGLFAPRAAALSV
Trigger: CACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATTATCTGAAGAGTCAGTGACCCCTGAATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp ATGCTAAAGTATTTCTTCTCCAAGCAGGGCCCTGAACTCCTTGGATaGACCCATTCACATGATTCTGCCTCAGCCACACCTCAGCAAGTG +
Preference number: 1 (lower is better)
Translates to: MLKYFFSKQGPELLG*THSHDSASATPQQV
Trigger: CACTTGCTGAGGTGTGGCTGAGGCAGAATCATGTGAATGGGTGCATCCAAGGAGTTCAGGGCCCTGCTTGGAGAAGAAATACTTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp CTTACAGCAAGGATGCCAGTCATCTGCCCTCCTACTGCAGGAAACTaGCCTTGCTTAAAAGAAATGCACAGGCTCATACACACACACACA +
Preference number: 1 (lower is better)
Translates to: LTARMPVICPPTAGN*PCLKEMHRLIHTHT
Trigger: TGTGTGTGTGTGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATGACTGGCATCCTTGCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp CTACAGTGGCTCAAGAACATGTCCTGTCTCTTAGCTGGAGGAGTCTaGTATTGCCCTTCAACAGCATCCGGATTCCAAAAACCCCAAAGA +
Preference number: 1 (lower is better)
Translates to: LQWLKNMSCLLAGGV*YCPSTASGFQKPQR
Trigger: TCTTTGGGGTTTTTGGAATCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGACATGTTCTTGAGCCACTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp GCCTTGTTTCCTTGGGGGCTGAAGTCTGGCATATTTTCAAACCAGTaGATTCAAGAATACAGTAAGATCCCAACCAGCAGGGTAGGCCGA +
Preference number: 1 (lower is better)
Translates to: ALFPWGLKSGIFSNQ*IQEYSKIPTSRVGR
Trigger: TCGGCCTACCCTGCTGGTTGGGATCTTACTGTATTCTTGAATGCACTGGTTTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp AATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAGTCACTaGATCCACAGGACGAGACTGCTGATTTGGCGGAACAGAATCCAA +
Preference number: 1 (lower is better)
Translates to: NLGYRDALQMGNSSH*IHRTRLLIWRNRIQ
Trigger: TTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp GCTTCAACAGCTACAGTGGCTCAAGAACATGTCCTGTCTCTTAGCTaGAGGAGTCTGCTATTGCCCTTCAACAGCATCCGGATTCCAAAA +
Preference number: 1 (lower is better)
Translates to: ASTATVAQEHVLSLS*RSLLLPFNSIRIPK
Trigger: TTTTGGAATCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGACATGTTCTTGAGCCACTGTAGCTGTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp AAGACACAGATGCAAACGGCCATTAGCTTAAAGACGTCAAGGTTGTaGCAGCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCAT +
Preference number: 1 (lower is better)
Translates to: KTQMQTAISLKTSRL*QQLQWKGRHHLLWH
Trigger: ATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGCTGTCACAACCTTGACGTCTTTAAGCTAATGGCCGTTTGCATCTGTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp CCTTGGAATGTTCTGAAAGACGTCAGTGGGGTAAGGTCCAGTATGTaGCTAGCCAAAGGTCACCTTTACCTTTTCCAGCTGGAGTTCATA +
Preference number: 1 (lower is better)
Translates to: PWNVLKDVSGVRSSM*LAKGHLYLFQLEFI
Trigger: TATGAACTCCAGCTGGAAAAGGTAAAGGTGACCTTTGGCTAGCCACATACTGGACCTTACCCCACTGACGTCTTTCAGAACATTCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp ATGGGAAATTCCAGTCACTGCATCCACAGGACGAGACTGCTGATTTaGCGGAACAGAATCCAAAGGAATTTGACGAAGTCACCAAACTCC +
Preference number: 1 (lower is better)
Translates to: MGNSSHCIHRTRLLI*RNRIQRNLTKSPNS
Trigger: GGAGTTTGGTGACTTCGTCAAATTCCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 90 bp ACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTaGACGGCGACACCTTGTTTGCAGAATCCTGCATTACTTAACCCC +
Preference number: 1 (lower is better)
Translates to: TVENKAVLSMPGQYI*TATPCLQNPALLNP
Trigger: GGGGTTAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp TCTTTCATCTCTACTTTCCTCCTCATAGCGGGGCTGGAGGGAGGGTaGGTTTACCAGAAACTCCAAAATCCCTCAATCCTGTATTTCCTT +
Preference number: 1 (lower is better)
Translates to: SFISTFLLIAGLEGG*VYQKLQNPSILYFL
Trigger: AAGGAAATACAGGATTGAGGGATTTTGGAGTTTCTGGTAAACTCACCCTCCCTCCAGCCCCGCTATGAGGAGGAAAGTAGAGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp TGCTCTCTATGCCAGGACAGTACATTTGGACGGCGACACCTTGTTTaGAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAA +
Preference number: 1 (lower is better)
Translates to: CSLCQDSTFGRRHLV*RILHYLTPEVNHTK
Trigger: TTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp GCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTGGATaGTTAACAGTGGAAATAAAAGAAGCCTGTGATCAATCCCTCCTC +
Preference number: 1 (lower is better)
Translates to: APCPKQTEQQYSEGG*LTVEIKEACDQSLL
Trigger: GAGGAGGGATTGATCACAGGCTTCTTTTATTTCCACTGTTAATCATCCACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp CCAGCTGGAGTTCATAAATTCTTGCAGCCTTGTTTCCTTGGGGGCTaGAGTCTGGCATATTTTCAAACCAGTGCATTCAAGAATACAGTA +
Preference number: 1 (lower is better)
Translates to: PAGVHKFLQPCFLGG*SLAYFQTSAFKNTV
Trigger: TACTGTATTCTTGAATGCACTGGTTTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACAAGGCTGCAAGAATTTATGAACTCCAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 90 bp TCCTTTGGCATCAACTATTATGCTATTAATACTTGGGTAGGACAATaGGCAAAATGCTTCCCAAGTTCGCTCCCTCTCAGCTTTGGCAGA +
Preference number: 1 (lower is better)
Translates to: SFGINYYAINTWVGQ*AKCFPSSLPLSFGR
Trigger: TCTGCCAAAGCTGAGAGGGAGCGAACTTGGGAAGCATTTTGCTCATTGTCCTACCCAAGTATTAATAGCATAATAGTTGATGCCAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp CATGAATCTATTTATGTCCATCCGTCTACTCACATGAAGATGCTCTaGAGCTCCACAGGGATGGATGGGATTAGAATAAAGCCAATATGG +
Preference number: 1 (lower is better)
Translates to: HESIYVHPSTHMKML*SSTGMDGIRIKPIW
Trigger: CCATATTGGCTTTATTCTAATCCCATCCATCCCTGTGGAGCTGCAGAGCATCTTCATGTGAGTAGACGGATGGACATAAATAGATTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 90 bp CACCAAACTCCAGCAAATTCCACACCTGCAATCTATCCAGAGTTGTaGCAAGACAGGGCAGGAGATAAGGAGATAGATAAAACTTTGAAT +
Preference number: 1 (lower is better)
Translates to: HQTPANSTPAIYPEL*QDRAGDKEIDKTLN
Trigger: ATTCAAAGTTTTATCTATCTCCTTATCTCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGCAGGTGTGGAATTTGCTGGAGTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGCTGCCAGGTCCCCATaGCTGTCCCTGAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVAARSP*LSLSRP
Trigger: TGGCCTGCTCAGGGACAGCCATGGGGACCTGGCAGC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCAC +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGPAEAK*RTPTAH
Trigger: GTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCCCCATGGCTGTCCCTaGGCAGGCCACCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLPHGCP*AGHQPH
Trigger: GTGGGGCTGGTGGCCTGCTCAGGGACAGCCATGGGG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTACAGGCACGTCCCCCTaGCTGAGGCAGCCCATGCTC +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTTGTSP*LRQPML
Trigger: GAGCATGGGCTGCCTCAGTCAGGGGGACGTGCCTGT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGCCAGGACAGGGCACTaGATTCATCCTGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGARTGH*IHPELP
Trigger: GGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGCCAGGACAGGGCACTaGATTCATCCTGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLARTGH*IHPELP
Trigger: GGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCTGGAGCAGCTGCAGTaGCAGTCTTCCCACAGTTGC +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGLEQLQ*QSSHSC
Trigger: GCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGGGGTCCAGTGTGTCTaGCCAGGCCAACCTGATGAC +
Preference number: 2 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLGVQCV*PGQPDD
Trigger: GTCATCAGGTTGGCCTGGTCAGACACACTGGACCCC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCCAGATTCCCACCTTTaGGAGCTACACCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLPDSHL*ELHPQV
Trigger: CACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAGGAGAGGGCGGCACTaGCCCAGGGATTGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTRRGRH*PRDCRS
Trigger: TGACCTGCAATCCCTGGGCCAGTGCCGCCCTCTCCT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCAGAGTGATCCTGCCTaGAGGAAAAGCCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGQSDPA*RKSQHQ
Trigger: CTGGTGCTGGCTTTTCCTTCAGGCAGGATCACTCTG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGACAATTGAGACGCACTaGGCAGGGATCTCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGTIETH*AGISVG
Trigger: GCCCACTGAGATCCCTGCTCAGTGCGTCTCAATTGT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGTTGCCCTGGAGCAGCTaGAGTGACAGTCTTCCCACA +
Preference number: 2 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLLPWSS*SDSLPT
Trigger: TGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCAA...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCACACGGTCTCTCTCCTaGACCCTGCCCAAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVTRSLS*TLPKAD
Trigger: GTCTGCTTTGGGCAGGGTGCAGGAGAGAGACCGTGT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCCATCTGTTTTGAGCTaGCAGGTCCCCATGGCTGTC +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGPSVLS*QVPMAV
Trigger: GACAGCCATGGGGACCTGGCAGCTCAAAACAGATGG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCTCCTTTTTCGTCCCTaGCTGGGCTCTCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLLLFRP*LGSLDN
Trigger: GTTGTCCAGAGAGCCCAGCCAGGGACGAAAAAGGAG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCCCTTCCCTGGACTTTaGTGCCATCAGAGGGGACAC +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVPFPGL*CHQRGH
Trigger: GTGTCCCCTCTGATGGCACCAAAGTCCAGGGAAGGG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTGCTGCCATCTGTTTTaGGCTGCCAGGTCCCCATGG +
Preference number: 2 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILCCHLF*AARSPW
Trigger: CCATGGGGACCTGGCAGCTCAAAACAGATGGCAGCA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTGCTGCCATCTGTTTTaGGCTGCCAGGTCCCCATGG +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTCCHLF*AARSPW
Trigger: CCATGGGGACCTGGCAGCTCAAAACAGATGGCAGCA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCCAGCCATTACGCCTTaGCCATCAGTTCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTPAITP*PSVLPS
Trigger: GCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCTGGGCATGGGGACATaGAGGAAAGGGGCCTCATCT +
Preference number: 2 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLLGMGT*RKGASS
Trigger: AGATGAGGCCCCTTTCCTCCATGTCCCCATGCCCAG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGTATGTGTCTGGGCATaGGGACATGGAGGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVVCVWA*GHGGKG
Trigger: CCCCTTTCCTCCATGTCCCCATGCCCAGACACATAC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGAGCTACACCCTCAGGTaGGTAGCCAGGACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLSYTLR*VARTGH
Trigger: GTGCCCTGTCCTGGCTACTCACCTGAGGGTGTAGCT...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGGGGTCCAGTGTGTCTaGCCAGGCCAACCTGATGAC +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLGVQCV*PGQPDD
Trigger: GTCATCAGGTTGGCCTGGTCAGACACACTGGACCCC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCTCTCTCCTGCACCCTaGCCAAAGCAGACAGAACAA +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLSPAP*PKQTEQ
Trigger: TTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTTCCCTGGACTTTGGTaGCATCAGAGGGGACACAAC +
Preference number: 2 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLFPGLW*HQRGHN
Trigger: GTTGTGTCCCCTCTGATGGCACCAAAGTCCAGGGAA...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCAGCTGCCCTGTCAGTaGAACTCCGGCGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGQLPCQ*NSGALP
Trigger: TGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTCTAGGTGCCATCTATaGCGATGCCCTGGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSRCHL*RCPGEF
Trigger: AAACTCCCCAGGGCATCGTCATAGATGGCACCTAGA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGACTGGAGATACAATTaGGACGCACTGAGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLDWRYN*DALSRD
Trigger: ATCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCTCTCCAGGATCACTaGCTAGACCTGGGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPLQDH*LDLGQV
Trigger: GACTTGGCCCAGGTCTAGTCAGTGATCCTGGAGAGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCTGGGTTGCTCGGAGTaGAGCAAGGGCAATGCCAAT +
Preference number: 2 (lower is better)
Translates to: GRQPLTLGRRGLTCISMELGCSE*SKGNAN
Trigger: ATTGGCATTGCCCTTGCTGCACTCCGAGCAACCCAG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCTCTCTCCTGCACCCTaGCCAAAGCAGACAGAACAA +
Preference number: 2 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILLSPAP*PKQTEQ
Trigger: TTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGACACGGTCTCTCTCCTaGACCCTGCCCAAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGTRSLS*TLPKAD
Trigger: GTCTGCTTTGGGCAGGGTGCAGGAGAGAGACCGTGT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGAGAAGGGGTCTCACTTaGATCAGCATGGAGATGTCA +
Preference number: 2 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLRRGLT*ISMEMS
Trigger: TGACATCTCCATGCTGATGCAAGTGAGACCCCTTCT...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGAAACTTTGCTCGGCCTaGAGGCTCCCCCTGTTGGTC +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLKLCSA*RLPLLV
Trigger: GACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTT...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGTGGCCACCGTGGTCTaGCCTAAAAGGCACACACCT +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLVATVV*PKRHTP
Trigger: AGGTGTGTGCCTTTTAGGGCAGACCACGGTGGCCAC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCATGCCCTGGGGAGTTTaGCTGTGCTTCCAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVMPWGV*LCFQSK
Trigger: TTTGCTTTGGAAGCACAGCCAAACTCCCCAGGGCAT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCACCAAGGTTTCCTTTaGACTTCTGCCCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGHQGFL*TSALLP
Trigger: AGGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp ACTTTGCTCGGCCTGCAGGCTCCCCCTGTTGGTCAGATACTTGCATaGACATCCTCAGTGTTCAATGCTCCTGGAAGAGCCCAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TLLGLQAPPVGQILA*TSSVFNAPGRAQER
Trigger: CCTCTCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGCCAGGCTCCTGGCCTaGCATACGCTCTTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQARLLA*HTLLFC
Trigger: ACAAAACAAGAGCGTATGTCAGGCCAGGAGCCTGGC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGCACGTCCCCCTGACTaGGGCAGCCCATGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTARPPD*GSPCSR
Trigger: CCTAGAGCATGGGCTGCCTCAGTCAGGGGGACGTGC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGCTGGGTTGCTCGGAGTaGAGCAAGGGCAATGCCAAT +
Preference number: 2 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQLGCSE*SKGNAN
Trigger: ATTGGCATTGCCCTTGCTGCACTCCGAGCAACCCAG...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAAGTGGGTTAAACTTTaGTCGGCCTGCAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGKWVKL*SACRLP
Trigger: GGGGAGCCTGCAGGCCGAGCAAAGTTTAACCCACTT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGACAAGCCAGGCTCCTaGCCTGACATACGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQDKPGS*PDIRSC
Trigger: ACAAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGACTTTCTTTTGCCCTaGAGCAGCTGCAGTGACAGT +
Preference number: 2 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTDFLLP*SSCSDS
Trigger: ACTGTCACTGCAGCTGCTCCAGGGCAAAAGAAAGTC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCCTGGCTGGGCTCTCTaGACAACACAGGCACGTCCC +
Preference number: 2 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSPGWAL*TTQARP
Trigger: GGGACGTGCCTGTGTTGTCCAGAGAGCCCAGCCAGG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGCCAAGGTATGTGTCTaGGCATGGGGACATGGAGGA +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLAKVCV*AWGHGG
Trigger: TCCTCCATGTCCCCATGCCCAGACACATACCTTGGC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCACCAAGGTTTCCTTTaGACTTCTGCCCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLHQGFL*TSALLP
Trigger: AGGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp GTCACTGACTCTTCAGATAATGCCCTAAACAACTGGAGTGTGGGCTaGTTTGCTCCAAGAGCAGCTGCCCTGTCAGTGGAACTCCGGCGC +
Preference number: 2 (lower is better)
Translates to: VTDSSDNALNNWSVG*FAPRAAALSVELRR
Trigger: GCGCCGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATTATCTGAAGAGTCAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp CAGTCCCAAGGTAGACCCAAAGGTATGGCAGAATCCAGCCCTTTCTaGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: QSQGRPKGMAESSPF*RFSRLHTLLCGWKC
Trigger: GCACTTCCACCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTACCTTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp CACCACATAAGCACAGGGTTCTCCAGCCGTGGGGTCAGGGTGGCATaGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGGCTACAGAGAT +
Preference number: 2 (lower is better)
Translates to: HHISTGFSSRGVRVA*RECLKAPQNLGYRD
Trigger: ATCTCTGTAGCCCAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCTGGAGAACCCTGTGCTTATGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACAGGCACGTCCCCCTaGCTGAGGCAGCCCATGCTC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTGTSP*LRQPML
Trigger: GAGCATGGGCTGCCTCAGTCAGGGGGACGTGCCTGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAGCTACACCCTCAGGTaGGTAGCCAGGACAGGGCAC +
Preference number: 2 (lower is better)
Translates to: PFPHILKATSHYALPISSSYTLR*VARTGH
Trigger: GTGCCCTGTCCTGGCTACTCACCTGAGGGTGTAGCT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTCAACAGGAAGGGAATaGGCTCAGCTCTATTTCTCA +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVSTGRE*AQLYFS
Trigger: TGAGAAATAGAGCTGAGCTCATTCCCTTCCTGTTGA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATGGGAGTCTGATCCCTaGGGACAGGAGGGGCCACCC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLWESDP*GQEGPP
Trigger: GGGTGGCCCCTCCTGTCCTCAGGGATCAGACTCCCA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCACCACAGATCCTTTaGGCACCACCCCGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLAPQIL*APPRPR
Trigger: GCGGGGACGGGGTGGTGCTCAAAGGATCTGTGGTGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCCTGGCTGGGCTCTCTaGACAACACAGGCACGTCCC +
Preference number: 2 (lower is better)
Translates to: GTHPQLHETPSFLNEHESPGWAL*TTQARP
Trigger: GGGACGTGCCTGTGTTGTCCAGAGAGCCCAGCCAGG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTAATGCCCTAAACAACTaGAGTGTGGGCTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLNALNN*SVGLFA
Trigger: AGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCTTCAACAGCTACAGTaGCTCAAGAACATGTCCTGT +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLQQLQ*LKNMSC
Trigger: ACAGGACATGTTCTTGAGCCACTGTAGCTGTTGAAG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACTTGCCCATCAGTTCTaGCCAGCGGAGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLAHQF*PAEAPL
Trigger: CAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGATCCTCAGTGTTCAATaGTCCTGGAAGAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGILSVQ*SWKSPG
Trigger: TCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGAT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGAGTTCATAAATTCTTaGAGCCTTGTTTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVEFINS*SLVSLG
Trigger: CCCCAAGGAAACAAGGCTGCAAGAATTTATGAACTC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGAC +
Preference number: 2 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMAGSPC*SDTCID
Trigger: GTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCCCACAGTTGCTCCTTaGGAAACAGAAATGATGTTG +
Preference number: 2 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEPTVAP*ETEMML
Trigger: CAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGAATCCAGCCCTTTCTTaGGGTTCTCAAGGCTTCACA +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLNPALS*GSQGFT
Trigger: TGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATT...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGACTTTCTTTTGCCCTaGAGCAGCTGCAGTGACAGT +
Preference number: 2 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMDFLLP*SSCSDS
Trigger: ACTGTCACTGCAGCTGCTCCAGGGCAAAAGAAAGTC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACTGGGCATGGGGACATaGAGGAAAGGGGCCTCATCT +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLGMGT*RKGASS
Trigger: AGATGAGGCCCCTTTCCTCCATGTCCCCATGCCCAG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGTATGTGTCTGGGCATaGGGACATGGAGGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSVCVWA*GHGGKG
Trigger: CCCCTTTCCTCCATGTCCCCATGCCCAGACACATAC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAAGAGCCCCCTTCCCTaGACTTTGGTGCCATCAGAG +
Preference number: 2 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSKSPLP*TLVPSE
Trigger: CTCTGATGGCACCAAAGTCCAGGGAAGGGGGCTCTT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAGGAGAGGGCGGCACTaGCCCAGGGATTGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPRRGRH*PRDCRS
Trigger: TGACCTGCAATCCCTGGGCCAGTGCCGCCCTCTCCT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCTCCAAGCAGGGCCCTaGACTCCTTGGATGCACCCA +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLLQAGP*TPWMHP
Trigger: TGGGTGCATCCAAGGAGTTCAGGGCCCTGCTTGGAG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGTGTTTCCTTGGGGGCTaGAGTCTGGCATATTTTCAA +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLCFLGG*SLAYFQ
Trigger: TTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACA...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATTGCCCTGGAGCAGCTaGAGTGACAGTCTTCCCACA +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLPWSS*SDSLPT
Trigger: TGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCAA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGCATTCATCCTGAGCTaGCCCCACTCCCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLAFILS*PHSPSR
Trigger: TCTGCTGGGGGAGTGGGGGCAGCTCAGGATGAATGC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGCAGGAAACTGCCCTTaGTTAAAAGAAATGCACAGG +
Preference number: 2 (lower is better)
Translates to: SRGVRVALRECLKAPQNLAGNCP*LKEMHR
Trigger: CCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACACTGGCCCAGGGATTaGAGGTCAGGGAACTCTAGC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLHWPRD*RSGNSS
Trigger: GCTAGAGTTCCCTGACCTGCAATCCCTGGGCCAGTG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGGTGGAAGTGCACATaGATACACGCTATGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGWKCT*IHAMAW
Trigger: CCAGGCCATAGCGTGTATGCATGTGCACTTCCACCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACCACACCTCAGCAAGTaGGTGGGTGGCAGGGAACAC +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPPHLSK*VGGREH
Trigger: GTGTTCCCTGCCACCCACGCACTTGCTGAGGTGTGG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTTTTTCGTCCCTGGCTaGGCTCTCTGGACAACACAG +
Preference number: 2 (lower is better)
Translates to: PFPHILKATSHYALPISSFFVPG*ALWTTQ
Trigger: CTGTGTTGTCCAGAGAGCCCAGCCAGGGACGAAAAA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACCCTTCCCTGGACTTTaGTGCCATCAGAGGGGACAC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLPFPGL*CHQRGH
Trigger: GTGTCCCCTCTGATGGCACCAAAGTCCAGGGAAGGG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAAAGAGCCCCCTTCCCTaGACTTTGGTGCCATCAGAG +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTKSPLP*TLVPSE
Trigger: CTCTGATGGCACCAAAGTCCAGGGAAGGGGGCTCTT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACCAGGGTTTGGAAGGTaGGGTCCAGTGTGTCTGACC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLPGFGR*GPVCLT
Trigger: GGTCAGACACACTGGACCCCACCTTCCAAACCCTGG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACCATGGTACTCTACCTaGCAGATGTGCTTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLPWYST*QMCLGA
Trigger: GGCCCCCAAGCACATCTGCCAGGTAGAGTACCATGG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCAGCTGCCCTGTCAGTaGAACTCCGGCGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLQLPCQ*NSGALP
Trigger: TGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATCCATGCAGGGCAGTTaGAAGCCCCCTCCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLSMQGS*KPPPQF
Trigger: AAACTGGGGAGGGGGCTTCCAACTGCCCTGCATGGA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACCACCTTGGAGAAATaGGGTGGCCACCGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTTLEK*GGHRGL
Trigger: CAGACCACGGTGGCCACCCCATTTCTCCAAGGTGGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCTGGAGCAGCTGCAGTaGCAGTCTTCCCACAGTTGC +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLLEQLQ*QSSHSC
Trigger: GCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGGGTCAGGGTGGCATTaGGGGAGTGTCTTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLGSGWH*GSVLRL
Trigger: GAGCCTTAAGACACTCCCTCAATGCCACCCTGACCC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCATTCATCCTGAGCTaGCCCCACTCCCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAFILS*PHSPSR
Trigger: TCTGCTGGGGGAGTGGGGGCAGCTCAGGATGAATGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTAGGATGCCAGTCATCTaGCCTCCTACTGCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: GTHPQLHETPSFLNEHESRMPVI*PPTAGN
Trigger: GTTTCCTGCAGTAGGAGGGCAGATGACTGGCATCCT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTGCTCCAAGAGCAGCTaGCCTGTCAGTGGAACTCCG +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLCSKSS*PVSGTP
Trigger: CGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGAGTGTGGGCTTGTTTaGTCCAAGAGCAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLECGLV*SKSSCP
Trigger: AGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGACAAGCCAGGCTCCTaGCCTGACATACGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLDKPGS*PDIRSC
Trigger: ACAAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAATGATTCAGTGGGGTaGGAACTTATACAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGNDSVG*ELIQRQ
Trigger: CTGCCTTTGTATAAGTTCCCACCCCACTGAATCATT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCAC +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTPAEAK*RTPTAH
Trigger: GTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGATGGGGTGGCCACCGTaGTCTGCCCTAAAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLMGWPP*SALKGT
Trigger: TGTGCCTTTTAGGGCAGACCACGGTGGCCACCCCAT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp TGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTAATTaGATGGAAACATGCAGAACTAACCAGTCTGGGAGTCTGATCCCT +
Preference number: 2 (lower is better)
Translates to: WGWFSPGGGQGITFN*METCRTNQSGSLIP
Trigger: AGGGATCAGACTCCCAGACTGGTTAGTTCTGCATGTTTCCATCAAATTAAAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATCTAGGTGCCATCTATaGCGATGCCCTGGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLSRCHL*RCPGEF
Trigger: AAACTCCCCAGGGCATCGTCATAGATGGCACCTAGA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCCAGATTCCCACCTTTaGGAGCTACACCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLPDSHL*ELHPQV
Trigger: CACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGACCCTGTCAGTGAGCTaGACTGGGCTCCACTCCCAA +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMTLSVS*TGLHSQ
Trigger: TTGGGAGTGGAGCCCAGTGCAGCTCACTGACAGGGT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCATCAACAGTGGCCCTaGCCACCACATAAGCACAGG +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLHQQWP*PPHKHR
Trigger: CCTGTGCTTATGTGGTGGGCAGGGCCACTGTTGATG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATCTATGACGATGCCCTaGGGAGTTTGGCTGTGCTTC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLSMTMP*GVWLCF
Trigger: GAAGCACAGCCAAACTCCCCAGGGCATCGTCATAGA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCCTGGCAGATGTGCTTaGGGGCCACCTAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTPGRCA*GPPKEW
Trigger: CCACTCCTTAGGTGGCCCCCAAGCACATCTGCCAGG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCAGAGGCCTCCCCATaGTACTCTACCTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAEASP*YSTWQM
Trigger: CATCTGCCAGGTAGAGTACCATGGGGAGGCCTCTGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAGTGTTCAATGCTCCTaGAAGAGCCCAGGAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPSVQCS*KSPGEG
Trigger: GCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGGCTGGTTGACACGTTaGCAACCAGCAGTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMGWLTR*QPAVPR
Trigger: CCTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACTAGGTAAACCACCTTaGAGAAATGGGGTGGCCACC +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLGKPP*RNGVAT
Trigger: GGTGGCCACCCCATTTCTCCAAGGTGGTTTACCTAG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp GATGGGAAATTCCAGTCACTGCATCCACAGGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAGGAATTTGACGAAGTCACCAAACTC +
Preference number: 2 (lower is better)
Translates to: DGKFQSLHPQDETAD*AEQNPKEFDEVTKL
Trigger: GAGTTTGGTGACTTCGTCAAATTCCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp GTGCTCTCTATGCCAGGACAGTACATTTGGACGGCGACACCTTGTTaGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAA +
Preference number: 2 (lower is better)
Translates to: VLSMPGQYIWTATPC*QNPALLNPRSESHK
Trigger: TTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGGGGAGTTTGGCTGTaGTTCCAAAGCAAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: PFPHILKATSHYALPISSWGVWL*FQSKSF
Trigger: GAAACTTTTGCTTTGGAAGCACAGCCAAACTCCCCA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCCAAGGTATGTGTCTaGGCATGGGGACATGGAGGA +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAKVCV*AWGHGG
Trigger: TCCTCCATGTCCCCATGCCCAGACACATACCTTGGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGATTCTCAGCCAGGTCTaGAGGCGCCCCTGTGATGAT +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMILSQV*RRPCDD
Trigger: ATCATCACAGGGGCGCCTCCAGACCTGGCTGAGAAT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAAGTCTGAGGAGGCCTaGGAGCCAGTACACATTCAG +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPKSEEA*EPVHIQ
Trigger: CTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp CACAGGACGAGACTGCTGATTTGGCGGAACAGAATCCAAAGGAATTaGACGAAGTCACCAAACTCCAGCAAATTCCACACCTGCAATCTA +
Preference number: 2 (lower is better)
Translates to: HRTRLLIWRNRIQRN*TKSPNSSKFHTCNL
Trigger: TAGATTGCAGGTGTGGAATTTGCTGGAGTTTGGTGACTTCGTCAAATTCCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGGGCTGGAGGGAGGGTaGGTTTACCAGAAACTCCAA +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTGLEGG*VYQKLQ
Trigger: TTGGAGTTTCTGGTAAACTCACCCTCCCTCCAGCCC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTACAATTGAGACGCACTaGGCAGGGATCTCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTTIETH*AGISVG
Trigger: GCCCACTGAGATCCCTGCTCAGTGCGTCTCAATTGT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTAACTGTAATGAGCAGTaGCACAAACCCAGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: GTHPQLHETPSFLNEHESNCNEQ*HKPSPN
Trigger: GTTTGGACTGGGTTTGTGTCACTGCTCATTACAGTT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAAGAAGGGGTCTCACTTaGATCAGCATGGAGATGTCA +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLRRGLT*ISMEMS
Trigger: TGACATCTCCATGCTGATGCAAGTGAGACCCCTTCT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGGAAATTCCAGTCACTaGATCCACAGGACGAGACTG +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLGNSSH*IHRTRL
Trigger: CAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCTCCTGTCCAAATCTTaGCTCAAAGATAATCCTCTC +
Preference number: 2 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSLLSKS*LKDNPL
Trigger: GAGAGGATTATCTTTGAGCCAAGATTTGGACAGGAG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTATCAAGATCAGCAATaGCAAAACCTCCGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: GTHPQLHETPSFLNEHESYQDQQ*QNLRRL
Trigger: AAGCCTGCGGAGGTTTTGCCATTGCTGATCTTGATA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 90 bp AACCCCCGAAGTGAATCACACAAAATGGCTGTAACCAGGATCTGTTaGAAGACACAGATGCAAACGGCCATTAGCTTAAAGACGTCAAGG +
Preference number: 2 (lower is better)
Translates to: NPRSESHKMAVTRIC*KTQMQTAISLKTSR
Trigger: CCTTGACGTCTTTAAGCTAATGGCCGTTTGCATCTGTGTCTTCAAACAGATCCTGGTTACAGCCATTTTGTGTGATTCACTTCGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTAGAGCATGGCAGCAATaGTTCAGTGGGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTRAWQQ*FSGVGT
Trigger: AGTTCCCACCCCACTGAATCATTGCTGCCATGCTCT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCTTTCCCTCACATTCTaGAAGCTACCAGCCATTACG +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLLSLTF*KLPAIT
Trigger: CGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCTTGAGACTTTCTTTTaGCCTGGAGCAGCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLETFF*PGAAAV
Trigger: CACTGCAGCTGCTCCAGGGCAAAAGAAAGTCTCAAG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCTTGCCCATCAGTTCTaGCCAGCGGAGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMLAHQF*PAEAPL
Trigger: CAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCATCTGCCCTCCTACTaGAGGAAACTGCCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTHLPSY*RKLPLL
Trigger: AAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACCAGCAAATGATCCTTaGAGCTTTTGGAACACAAGG +
Preference number: 2 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLPANDP*SFWNTR
Trigger: CCTTGTGTTCCAAAAGCTGCAAGGATCATTTGCTGG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATTAGCTGGAGGAGTCTaGTATTGCCCTTCAACAGCA +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPLAGGV*YCPSTA
Trigger: TGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGGAAATTCCAGTCACTaGATCCACAGGACGAGACTG +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMGNSSH*IHRTRL
Trigger: CAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAAATGATTCAGTGGGGTaGGAACTTATACAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTNDSVG*ELIQRQ
Trigger: CTGCCTTTGTATAAGTTCCCACCCCACTGAATCATT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAACGAGACTGCTGATTTaGCGGAACAGAATCCAAAGG +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPTRLLI*RNRIQR
Trigger: CCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGAGGCTCCACAAAATCTaGGCTACAGAGATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLRLHKI*ATEMLC
Trigger: GCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCCTCTCCAGGATCACTaGCTAGACCTGGGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMPLQDH*LDLGQV
Trigger: GACTTGGCCCAGGTCTAGTCAGTGATCCTGGAGAGG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTGGGGAGTTTGGCTGTaGTTCCAAAGCAAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLWGVWL*FQSKSF
Trigger: GAAACTTTTGCTTTGGAAGCACAGCCAAACTCCCCA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCCTTACAGCAAGGATaGCAGTCATCTGCCCTCCTA +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSLQQG*QSSALL
Trigger: TAGGAGGGCAGATGACTGGCATCCTTGCTGTAAGGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGATCTATCCAGAGTTGTaGCAAGACAGGGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMIYPEL*QDRAGD
Trigger: ATCTCCTGCCCTGTCTTGGCACAACTCTGGATAGAT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGTAAGGTCCAGTATGTaGCTAGCCAAAGGTCACCTT +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMVRSSM*LAKGHL
Trigger: AAGGTGACCTTTGGCTAGCCACATACTGGACCTTAC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGGCCAACCTGATGACTaGTTACTCAACAAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTGQPDD*LLNKSE
Trigger: CTCTGACTTGTTGAGTAATCAGTCATCAGGTTGGCC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGTCAACAGGAAGGGAATaGGCTCAGCTCTATTTCTCA +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMSTGRE*AQLYFS
Trigger: TGAGAAATAGAGCTGAGCTCATTCCCTTCCTGTTGA...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCCATCTGTTTTGAGCTaGCAGGTCCCCATGGCTGTC +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMPSVLS*QVPMAV
Trigger: GACAGCCATGGGGACCTGGCAGCTCAAAACAGATGG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACCTACTGCAGGAAACTaGCCTTGCTTAAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPPTAGN*PCLKEM
Trigger: CATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGCAGCAATGATTCAGTaGGGTGGGAACTTATACAAA +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLAAMIQ*GGNLYK
Trigger: TTTGTATAAGTTCCCACCCCACTGAATCATTGCTGC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAGAGCATGGCAGCAATaGTTCAGTGGGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMRAWQQ*FSGVGT
Trigger: AGTTCCCACCCCACTGAATCATTGCTGCCATGCTCT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTAACTGTAATGAGCAGTaGCACAAACCCAGTCCAAAC +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTNCNEQ*HKPSPN
Trigger: GTTTGGACTGGGTTTGTGTCACTGCTCATTACAGTT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACTCAAAAATGTTCCTTaGGGAAAACCCTTGGAATGT +
Preference number: 2 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPLKNVP*GKPLEC
Trigger: ACATTCCAAGGGTTTTCCTCAAGGAACATTTTTGAG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCATCTGCCCTCCTACTaGAGGAAACTGCCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMHLPSY*RKLPLL
Trigger: AAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTGTTGGTCAGATACTTaGATTGACATCCTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLCWSDT*IDILSV
Trigger: AACACTGAGGATGTCAATGCAAGTATCTGACCAACA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCTCCTGTCCAAATCTTaGCTCAAAGATAATCCTCTC +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLLSKS*LKDNPL
Trigger: GAGAGGATTATCTTTGAGCCAAGATTTGGACAGGAG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGAC +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMAGSPC*SDTCID
Trigger: GTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCGTCACCATCTCCTTTaGCATCAACTATTATGCTAT +
Preference number: 2 (lower is better)
Translates to: LYNSGKQSSALYARTVHLRHHLL*HQLLCY
Trigger: ATAGCATAATAGTTGATGCCAAAGGAGATGGTGACG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGACTGGAGATACAATTaGGACGCACTGAGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMDWRYN*DALSRD
Trigger: ATCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGGACAGCCAGCAAATaGTCCTTGCAGCTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: MELLSAINRFRILSRSAMGTASK*SLQLLE
Trigger: TTCCAAAAGCTGCAAGGATCATTTGCTGGCTGTCCC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCCTACTGCAGGAAACTaGCCTTGCTTAAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTPTAGN*PCLKEM
Trigger: CATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCATACACAAAATAAATaGGGTGTTTACCAGCATTCA +
Preference number: 2 (lower is better)
Translates to: PCLQNPALLNPRSESHKMHTQNK*GVYQHS
Trigger: TGAATGCTGGTAAACACCGCATTTATTTTGTGTATG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CACCCCGTCCCCGCCATCCTCCATCAACAGTGGCCCTaGCCACCACATAAGCACAGGGTTCTCCAGCCGTGG +
Preference number: 3 (lower is better)
Translates to: HPVPAILHQQWP*PPHKHRVLQPW
Trigger: CCACGGCTGGAGAACCCTGTGCTTATGTGGTGGGCAGGGCCACTGTTGATGGAGGATGGCGGGGACGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp GAGCACCACCCCGTCCCCGCCATCCTCCATCAACAGTaGCCCTGCCCACCACATAAGCACAGGGTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: EHHPVPAILHQQ*PCPPHKHRVLQ
Trigger: CTGGAGAACCCTGTGCTTATGTGGTGGGCAGGGCCACTGTTGATGGAGGATGGCGGGGACGGGGTGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp TTGGAAGCCCCGGCACAGAGCACATCATTGAGCGACTaGGGCGCCCAGCAGAGGCCAAGTGGAGGACGCCAA +
Preference number: 3 (lower is better)
Translates to: LEAPAQSTSLSD*GAQQRPSGGRQ
Trigger: TTGGCGTCCTCCACTTGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGTGCTCTGTGCCGGGGCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp CAGGTGAGTAGCCAGGACAGGGCACTGCATTCATCCTaGGCTGCCCCCACTCCCCCAGCAGACATCAAGAGC +
Preference number: 3 (lower is better)
Translates to: QVSSQDRALHSS*AAPTPPADIKS
Trigger: GCTCTTGATGTCTGCTGGGGGAGTGGGGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGCTACTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp CATGGAGGAAAGGGGCCTCATCTCCTTTTTCGTCCCTaGCTGGGCTCTCTGGACAACACAGGCACGTCCCCC +
Preference number: 3 (lower is better)
Translates to: HGGKGPHLLFRP*LGSLDNTGTSP
Trigger: GGGGGACGTGCCTGTGTTGTCCAGAGAGCCCAGCCAGGGACGAAAAAGGAGATGAGGCCCCTTTCCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp ATCATTGAGCGACTGAGGCGCCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCACATTAGGCAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: IIERLRRPAEAK*RTPTAHIRQKG
Trigger: CCCCTTCTGCCTAATGTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGAAGGTAGGGAGGCCTaGAACTTAGGGACAGCCAGC +
Preference number: 3 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLEGREA*NLGTAS
Trigger: GCTGGCTGTCCCTAAGTTCAAGGCCTCCCTACCTTC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGGAGTGTGGGCTTGTTaGCTCCAAGAGCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGGVWAC*LQEQLP
Trigger: GGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGTTCCATGCAGGGCAGTaGGAAGCCCCCTCCCCAGTT +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLFHAGQ*EAPSPV
Trigger: AACTGGGGAGGGGGCTTCCAACTGCCCTGCATGGAA...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGCAATCTATCCAGAGTaGTGCCAAGACAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVAIYPE*CQDRAG
Trigger: TCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CAGCAGACATCAAGAGCCCCCTTCCCTGGACTTTGGTaGCATCAGAGGGGACACAACACAAGCCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: QQTSRAPFPGLW*HQRGHNTSPPV
Trigger: GACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAAGTCCAGGGAAGGGGGCTCTTGATGTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CAACTGGAGTGTGGGCTTGTTTGCTCCAAGAGCAGCTaGCCTGTCAGTGGAACTCCGGCGCACTTCCACTCA +
Preference number: 3 (lower is better)
Translates to: QLECGLVCSKSS*PVSGTPAHFHS
Trigger: TGAGTGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp GATACTTGCATTGACATCCTCAGTGTTCAATGCTCCTaGAAGAGCCCAGGAGAGGGCGGCACTGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: DTCIDILSVQCS*KSPGEGGTGPG
Trigger: CCCTGGGCCAGTGCCGCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCTGCTGCCATCTGTTTaGAGCTGCCAGGTCCCCATG +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLLLPSV*SCQVPM
Trigger: CATGGGGACCTGGCAGCTCAAAACAGATGGCAGCAG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGAAGGTAGGGAGGCCTaGAACTTAGGGACAGCCAGC +
Preference number: 3 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGEGREA*NLGTAS
Trigger: GCTGGCTGTCCCTAAGTTCAAGGCCTCCCTACCTTC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAG +
Preference number: 3 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVDETAD*AEQNPK
Trigger: CTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp CACCAGATTCCCACCTTTGCGAGCTACACCCTCAGGTaGGTAGCCAGGACAGGGCACTGCATTCATCCTGAG +
Preference number: 3 (lower is better)
Translates to: HQIPTFASYTLR*VARTGHCIHPE
Trigger: CTCAGGATGAATGCAGTGCCCTGTCCTGGCTACTCACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp ACCAGCCCCACGGCACACGGTCTCTCTCCTGCACCCTaGCCAAAGCAGACAGAACAACAGTATAGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: TSPTAHGLSPAP*PKQTEQQYSEG
Trigger: ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACCGTGTGCCGTGGGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp TGCCTGAAGGAAAAGCCAGCACCAGATTCCCACCTTTaGGAGCTACACCCTCAGGTGAGTAGCCAGGACAGG +
Preference number: 3 (lower is better)
Translates to: CLKEKPAPDSHL*ELHPQVSSQDR
Trigger: CCTGTCCTGGCTACTCACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGTGCTGGCTTTTCCTTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp TGGGCTTGTTTGCTCCAAGAGCAGCTGCCCTGTCAGTaGAACTCCGGCGCACTTCCACTCAATACTGGACTG +
Preference number: 3 (lower is better)
Translates to: WACLLQEQLPCQ*NSGALPLNTGL
Trigger: CAGTCCAGTATTGAGTGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp TTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTaGAAGTGCACATGCATACACGCTATGGCCTGGCGG +
Preference number: 3 (lower is better)
Translates to: LRFSRLHTLLCG*KCTCIHAMAWR
Trigger: CCGCCAGGCCATAGCGTGTATGCATGTGCACTTCCACCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTTCCCACAGTTGCTCCTaGAGAAACAGAAATGATGTT +
Preference number: 3 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLSHSCS*RNRNDV
Trigger: AACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGA...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGACCAGCCATTACGCCTaGCCCATCAGTTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMTSHYA*PISSAQ
Trigger: CTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp GCCTGCAGGCTCCCCCTGTTGGTCAGATACTTGCATTaGCATCCTCAGTGTTCAATGCTCCTGGAAGAGCCC +
Preference number: 3 (lower is better)
Translates to: ACRLPLLVRYLH*HPQCSMLLEEP
Trigger: GGGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp GCTCGGCCTGCAGGCTCCCCCTGTTGGTCAGATACTTaGATTGACATCCTCAGTGTTCAATGCTCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: ARPAGSPCWSDT*IDILSVQCSWK
Trigger: CTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGCTCTTGTTTTGTTTaGGTGAAGACTCCACTGGGT +
Preference number: 3 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLRSCFV*VKTPLG
Trigger: ACCCAGTGGAGTCTTCACCAAAACAAAACAAGAGCG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCAGAAGGGGTCTCACTaGCATCAGCATGGAGATGTC +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLQKGSH*HQHGDV
Trigger: GACATCTCCATGCTGATGCAAGTGAGACCCCTTCTG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGGAGTTCATAAATTCTaGCAGCCTTGTTTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVGVHKF*QPCFLG
Trigger: CCCAAGGAAACAAGGCTGCAAGAATTTATGAACTCC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTACAGTCTTCCCACAGTaGCTCCTTGAGAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTTVFPQ*LLEKQK
Trigger: TTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTGCAGGAAACTGCCCTaGCTTAAAAGAAATGCACAG +
Preference number: 3 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTCRKLP*LKRNAQ
Trigger: CTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAG +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLDETAD*AEQNPK
Trigger: CTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp ACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGAAATaGTGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: TVFPQLLLEKQK*CCARDKPGSWP
Trigger: AGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp GTAGACCCAAAGGTATGGCAGAATCCAGCCCTTTCTTaGGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: VDPKVWQNPALS*GSQGFTPSSVG
Trigger: ACCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp AAACCACCTTGGAGAAATGGGGTGGCCACCGTGGTCTaGCCTAAAAGGCACACACCTACCTACAGACATACA +
Preference number: 3 (lower is better)
Translates to: KPPWRNGVATVV*PKRHTPTYRHT
Trigger: TGTATGTCTGTAGGTAGGTGTGTGCCTTTTAGGGCAGACCACGGTGGCCACCCCATTTCTCCAAGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp ACACACACACACACACTCACTCACCAAGGTTTCCTTTaGACTTCTGCCCTTCTTCCTAGGCCCAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: THTHTLTHQGFL*TSALLPRPKQR
Trigger: CCTCTGCTTGGGCCTAGGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTGAGTGAGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp GGGGTCACTGACTCTTCAGATAATGCCCTAAACAACTaGAGTGTGGGCTTGTTTGCTCCAAGAGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: GVTDSSDNALNN*SVGLFAPRAAA
Trigger: GGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATTATCTGAAGAGTCAGTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp GCTACAGTGGCTCAAGAACATGTCCTGTCTCTTAGCTaGAGGAGTCTGCTATTGCCCTTCAACAGCATCCGG +
Preference number: 3 (lower is better)
Translates to: ATVAQEHVLSLS*RSLLLPFNSIR
Trigger: CCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGACATGTTCTTGAGCCACTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGAGACTGGAGATACAATaGAGACGCACTGAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMRLEIQ*RRTEQG
Trigger: TCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTCT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGGAACACAGGCTGGTaGACACGTTGGCAACCAGCA +
Preference number: 3 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGNTGW*TRWQPA
Trigger: TGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCTGGCAGGGTGGGGTaGGTTTTCTCCAGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAGRVG*VFSRRR
Trigger: CCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGTTAAATCAAGAATTTTaGGCCAGAGGTGAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLLNQEF*ARGEGG
Trigger: GCCACCCTCACCTCTGGCCAAAAATTCTTGATTTAA...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGGAATACTGTTAACTTaGACTCAAGGGGTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: SRGVRVALRECLKAPQNLGILLT*TQGVQS
Trigger: AGACTGCACCCCTTGAGTCAAAGTTAACAGTATTCC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp AGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTaGGAAACAGAAATGATGTTGTGCCAGGGACAAGCC +
Preference number: 3 (lower is better)
Translates to: SSCSDSLPTVAP*ETEMMLCQGQA
Trigger: GGCTTGTCCCTGGCACAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp TATTTCTTCTCCAAGCAGGGCCCTGAACTCCTTGGATaGACCCATTCACATGATTCTGCCTCAGCCACACCT +
Preference number: 3 (lower is better)
Translates to: YFFSKQGPELLG*THSHDSASATP
Trigger: AGGTGTGGCTGAGGCAGAATCATGTGAATGGGTGCATCCAAGGAGTTCAGGGCCCTGCTTGGAGAAGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CAACACATCATACTGATGTCAACCCTGTCAGTGAGCTaGACTGGGCTCCACTCCCAAAGGGGAAGCTCATTA +
Preference number: 3 (lower is better)
Translates to: QHIILMSTLSVS*TGLHSQRGSSL
Trigger: TAATGAGCTTCCCCTTTGGGAGTGGAGCCCAGTGCAGCTCACTGACAGGGTTGACATCAGTATGATGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp GGGTTAAACTTTGCTCGGCCTGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGACATCCTCAGTGTTCAA +
Preference number: 3 (lower is better)
Translates to: GLNFARPAGSPC*SDTCIDILSVQ
Trigger: TTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAGGCTGGTTGACACGTaGGCAACCAGCAGTCCCAAG +
Preference number: 3 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPRLVDT*ATSSPK
Trigger: CTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCCT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp AGGATGCCAGTCATCTGCCCTCCTACTGCAGGAAACTaGCCTTGCTTAAAAGAAATGCACAGGCTCATACAC +
Preference number: 3 (lower is better)
Translates to: RMPVICPPTAGN*PCLKEMHRLIH
Trigger: GTGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATGACTGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp TACAGAGATGCTTTGCAGATGGGAAATTCCAGTCACTaGATCCACAGGACGAGACTGCTGATTTGGCGGAAC +
Preference number: 3 (lower is better)
Translates to: YRDALQMGNSSH*IHRTRLLIWRN
Trigger: GTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCATCTGCAAAGCATCTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp CTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATaGGAAATTCCAGTCACTGCATCCACAGGACGAGAC +
Preference number: 3 (lower is better)
Translates to: LHKIWATEMLCR*EIPVTASTGRD
Trigger: GTCTCGTCCTGTGGATGCAGTGACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGACCAGATTCCCACCTTaGCGAGCTACACCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: LYNSGKQSSALYARTVHLTRFPP*RATPSG
Trigger: ACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTCACCAAGGTTTCCTTaGGACTTCTGCCCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: GTHPQLHETPSFLNEHESSPRFP*DFCPSS
Trigger: GGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTGA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGGTCAGATACTTGCATaGACATCCTCAGTGTTCAAT +
Preference number: 3 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMGQILA*TSSVFN
Trigger: ATTGAACACTGAGGATGTCAATGCAAGTATCTGACC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGGGAACACAGGCTGGTaGACACGTTGGCAACCAGCA +
Preference number: 3 (lower is better)
Translates to: PCLQNPALLNPRSESHKMGNTGW*TRWQPA
Trigger: TGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCCC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCAATCTATCCAGAGTaGTGCCAAGACAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLAIYPE*CQDRAG
Trigger: TCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp ATGCAAACGGCCATTAGCTTAAAGACGTCAAGGTTGTaGCAGCAACTACAGTGGAAGGGACGTCACCATCTC +
Preference number: 3 (lower is better)
Translates to: MQTAISLKTSRL*QQLQWKGRHHL
Trigger: GAGATGGTGACGTCCCTTCCACTGTAGTTGCTGTCACAACCTTGACGTCTTTAAGCTAATGGCCGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp AACATGTCCTGTCTCTTAGCTGGAGGAGTCTGCTATTaGCCTTCAACAGCATCCGGATTCCAAAAACCCCAA +
Preference number: 3 (lower is better)
Translates to: NMSCLLAGGVCY*PSTASGFQKPQ
Trigger: TTGGGGTTTTTGGAATCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGACATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp TGCCAGGACAGTACATTTGGACGGCGACACCTTGTTTaGAGAATCCTGCATTACTTAACCCCCGAAGTGAAT +
Preference number: 3 (lower is better)
Translates to: CQDSTFGRRHLV*RILHYLTPEVN
Trigger: ATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp CTAAAAGAAATTACGGCCAAGGTATGTGTCTGGGCATaGGGACATGGAGGAAAGGGGCCTCATCTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: LKEITAKVCVWA*GHGGKGPHLLF
Trigger: AAAAAGGAGATGAGGCCCCTTTCCTCCATGTCCCCATGCCCAGACACATACCTTGGCCGTAATTTCTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp TACAAACTTGTACAGAGCATGGCAGCAATGATTCAGTaGGGTGGGAACTTATACAAAGGCAGAGCATGGGGG +
Preference number: 3 (lower is better)
Translates to: YKLVQSMAAMIQ*GGNLYKGRAWG
Trigger: CCCCCATGCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGTACAAGTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp TCCAGTCACTGCATCCACAGGACGAGACTGCTGATTTaGCGGAACAGAATCCAAAGGAATTTGACGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SSHCIHRTRLLI*RNRIQRNLTKS
Trigger: TGACTTCGTCAAATTCCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp AAAAAGCTCTTCCTTACAGCAAGGATGCCAGTCATCTaGCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAA +
Preference number: 3 (lower is better)
Translates to: KKLFLTARMPVI*PPTAGNCPCLK
Trigger: TTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATGACTGGCATCCTTGCTGTAAGGAAGAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CTCAAGAACATGTCCTGTCTCTTAGCTGGAGGAGTCTaGTATTGCCCTTCAACAGCATCCGGATTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: LKNMSCLLAGGV*YCPSTASGFQK
Trigger: TTTTTGGAATCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGACATGTTCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CCTTGGGGGCTGAAGTCTGGCATATTTTCAAACCAGTaGATTCAAGAATACAGTAAGATCCCAACCAGCAGG +
Preference number: 3 (lower is better)
Translates to: PWGLKSGIFSNQ*IQEYSKIPTSR
Trigger: CCTGCTGGTTGGGATCTTACTGTATTCTTGAATGCACTGGTTTGAAAATATGCCAGACTTCAGCCCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTaGAGATGGGAAATTCCAGTCACTGCATCCACAGGA +
Preference number: 3 (lower is better)
Translates to: LRLHKIWATEML*RWEIPVTASTG
Trigger: TCCTGTGGATGCAGTGACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CCA 72 bp AACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTaGACGGCGACACCTTGTTTGCAGAATCCTGCATTA +
Preference number: 3 (lower is better)
Translates to: NKAVLSMPGQYI*TATPCLQNPAL
Trigger: TAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGAGTGTGGGCTTGTTaGCTCCAAGAGCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: MELLSAINRFRILSRSAMGVWAC*LQEQLP
Trigger: GGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGGAATACTGTTAACTTaGACTCAAGGGGTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLGILLT*TQGVQS
Trigger: AGACTGCACCCCTTGAGTCAAAGTTAACAGTATTCC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp CCAGCAAATTCCACACCTGCAATCTATCCAGAGTTGTaGCAAGACAGGGCAGGAGATAAGGAGATAGATAAA +
Preference number: 3 (lower is better)
Translates to: PANSTPAIYPEL*QDRAGDKEIDK
Trigger: TTTATCTATCTCCTTATCTCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGCAGGTGTGGAATTTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCGCTCTTGTTTTGTTTaGGTGAAGACTCCACTGGGT +
Preference number: 3 (lower is better)
Translates to: PCLQNPALLNPRSESHKMRSCFV*VKTPLG
Trigger: ACCCAGTGGAGTCTTCACCAAAACAAAACAAGAGCG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCACCAAGGTTTCCTTaGGACTTCTGCCCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSPRFP*DFCPSS
Trigger: GGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGGTCAGATACTTGCATaGACATCCTCAGTGTTCAAT +
Preference number: 3 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLGQILA*TSSVFN
Trigger: ATTGAACACTGAGGATGTCAATGCAAGTATCTGACC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATTAAATCAAGAATTTTaGGCCAGAGGTGAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPLNQEF*ARGEGG
Trigger: GCCACCCTCACCTCTGGCCAAAAATTCTTGATTTAA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp CAGAAACTTACAAACTTGTACAGAGCATGGCAGCAATaGTTCAGTGGGGTGGGAACTTATACAAAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: QKLTNLYRAWQQ*FSGVGTYTKAE
Trigger: CTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGTACAAGTTTGTAAGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR GCA 72 bp ATTTATGTCCATCCGTCTACTCACATGAAGATGCTCTaGAGCTCCACAGGGATGGATGGGATTAGAATAAAG +
Preference number: 3 (lower is better)
Translates to: IYVHPSTHMKML*SSTGMDGIRIK
Trigger: CTTTATTCTAATCCCATCCATCCCTGTGGAGCTGCAGAGCATCTTCATGTGAGTAGACGGATGGACATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGTGCAGGAAACTGCCCTaGCTTAAAAGAAATGCACAG +
Preference number: 3 (lower is better)
Translates to: PCLQNPALLNPRSESHKMCRKLP*LKRNAQ
Trigger: CTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCA...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGTAACCAGGATCTGTTaGAAGACACAGATGCAAACG +
Preference number: 3 (lower is better)
Translates to: PCLQNPALLNPRSESHKMVTRIC*KTQMQT
Trigger: CGTTTGCATCTGTGTCTTCAAACAGATCCTGGTTAC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp GTTCATAAATTCTTGCAGCCTTGTTTCCTTGGGGGCTaGAGTCTGGCATATTTTCAAACCAGTGCATTCAAG +
Preference number: 3 (lower is better)
Translates to: VHKFLQPCFLGG*SLAYFQTSAFK
Trigger: CTTGAATGCACTGGTTTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACAAGGCTGCAAGAATTTATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR TCA 72 bp ATCAACTATTATGCTATTAATACTTGGGTAGGACAATaGGCAAAATGCTTCCCAAGTTCGCTCCCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: INYYAINTWVGQ*AKCFPSSLPLS
Trigger: GCTGAGAGGGAGCGAACTTGGGAAGCATTTTGCTCATTGTCCTACCCAAGTATTAATAGCATAATAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCCCACAGTTGCTCCTaGAGAAACAGAAATGATGTT +
Preference number: 3 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSHSCS*RNRNDV
Trigger: AACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGCACGTCCCCCTGACTaGGGCAGCCCATGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGARPPD*GSPCSR
Trigger: CCTAGAGCATGGGCTGCCTCAGTCAGGGGGACGTGC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCCTGGCACACCTGCTTaGAGGACTGCCCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLPGTPA*RTARAQ
Trigger: CTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCACAGGCACGTCCCCCTaGCTGAGGCAGCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVTGTSP*LRQPML
Trigger: GAGCATGGGCTGCCTCAGTCAGGGGGACGTGCCTGT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCCTGGCACACCTGCTTaGAGGACTGCCCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVPGTPA*RTARAQ
Trigger: CTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLPAEAK*RTPTAH
Trigger: GTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTACCTCAGCAAGTGCGTaGGTGGCAGGGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLTSASA*VAGNTG
Trigger: GCCTGTGTTCCCTGCCACCCACGCACTTGCTGAGGT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCCCATGGCTGTCCCTaGGCAGGCCACCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPHGCP*AGHQPH
Trigger: GTGGGGCTGGTGGCCTGCTCAGGGACAGCCATGGGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGGGTCAGGGTGGCATTaGGGGAGTGTCTTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLGSGWH*GSVLRL
Trigger: GAGCCTTAAGACACTCCCTCAATGCCACCCTGACCC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCGCGCAGCATGGAGCTaGTTTCAGGCTGAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLRAAWS*FQAEFA
Trigger: AGCGAACTCAGCCTGAAAGCAGCTCCATGCTGCGCG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGACCTGCTTGCAGGACTaGCCGGGCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLTCLQD*PGSASL
Trigger: CAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGT...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCCTGGGGTGGGCGCCTaGACAGCTGAAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILPGVGA*TAEEQE
Trigger: CTCCTGCTCTTCAGCTGTGCAGGCGCCCACCCCAGG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGGGCAGACCCTCTGGTaGCTGGGGTGGGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLGQTLW*LGWAPA
Trigger: TGCAGGCGCCCACCCCAGGCACCAGAGGGTCTGCCC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGCATTCATCCTGAGCTaGCCCCACTCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLAFILS*PHSPSR
Trigger: TCTGCTGGGGGAGTGGGGGCAGCTCAGGATGAATGC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCACTGGCCCAGGGATTaGAGGTCAGGGAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLHWPRD*RSGNSS
Trigger: GCTAGAGTTCCCTGACCTGCAATCCCTGGGCCAGTG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTAAACTTTGCTCGGCCTaGAGGCTCCCCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLKLCSA*RLPLLV
Trigger: GACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTTGCTCCAAGAGCAGCTaGCCTGTCAGTGGAACTCCG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLCSKSS*PVSGTP
Trigger: CGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCA...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCAGCTGCCCTGTCAGTaGAACTCCGGCGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGQLPCQ*NSGALP
Trigger: TGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCATTCTGCTCCTTGTTaGGCAGCAGCAGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGHSAPC*AAAAAG
Trigger: CCCGGCTGCTGCTGCTGCCCAACAAGGAGCAGAATG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409645.5
CDS-3UTR TCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGCACGTCCCCCTGACTaGGGCAGCCCATGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEARPPD*GSPCSR
Trigger: CCTAGAGCATGGGCTGCCTCAGTCAGGGGGACGTGC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCAGAGTGATCCTGCCTaGAGGAAAAGCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLQSDPA*RKSQHQ
Trigger: CTGGTGCTGGCTTTTCCTTCAGGCAGGATCACTCTG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGGGCAGGGCGGGTTGTaGCTTGGAAAAGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLGQGGL*LGKEGE
Trigger: TTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCACCTGCTTGCAGGACTaGCCGGGCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVTCLQD*PGSASL
Trigger: CAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTAAGTGGGTTAAACTTTaGTCGGCCTGCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLKWVKL*SACRLP
Trigger: GGGGAGCCTGCAGGCCGAGCAAAGTTTAACCCACTT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGAGTGTGGGCTTGTTTaGTCCAAGAGCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLECGLV*SKSSCP
Trigger: AGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGACCCTGTCAGTGAGCTaGACTGGGCTCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGTLSVS*TGLHSQ
Trigger: TTGGGAGTGGAGCCCAGTGCAGCTCACTGACAGGGT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTAGCTTCCAGGGGAGCTaGGCCCTCGTAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILSFQGS*ALVREP
Trigger: GGGTTCCCTTACGAGGGCCCAGCTCCCCTGGAAGCT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGTATGTGTCTGGGCATaGGGACATGGAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLVCVWA*GHGGKG
Trigger: CCCCTTTCCTCCATGTCCCCATGCCCAGACACATAC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCCAGCAGAGGCCAAGTaGAGGACGCCAACCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTPAEAK*RTPTAH
Trigger: GTGAGCGGTTGGCGTCCTCCACTTGGCCTCTGCTGG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCCTGGCAGATGTGCTTaGGGGCCACCTAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLPGRCA*GPPKEW
Trigger: CCACTCCTTAGGTGGCCCCCAAGCACATCTGCCAGG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGCAGAGGCCTCCCCATaGTACTCTACCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLAEASP*YSTWQM
Trigger: CATCTGCCAGGTAGAGTACCATGGGGAGGCCTCTGC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGTCAGTGAGCTGCACTaGGCTCCACTCCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLVSELH*APLPKG
Trigger: CCCCTTTGGGAGTGGAGCCCAGTGCAGCTCACTGAC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCTGGCAGGGTGGGGTTaGTTTTCTCCAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLLAGWG*FSPGGG
Trigger: GCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGGGCGCCTGCACAGCTaGAGAGCAGGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEGRLHS*RAGGHL
Trigger: AAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCGCCC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCTGGAGCAGCTGCAGTaGCAGTCTTCCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLLEQLQ*QSSHSC
Trigger: GCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGGGGTCCAGTGTGTCTaGCCAGGCCAACCTGATGAC +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLGVQCV*PGQPDD
Trigger: GTCATCAGGTTGGCCTGGTCAGACACACTGGACCCC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCTGGAGTTCAGGTGCTaGTCAACCACAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLLEFRC*STTNPR
Trigger: TCTGGGGTTTGTGGTTGAGCAGCACCTGAACTCCAG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGTCTCGAAGAAGGAACTaGAGGTCCCGTCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGSRRRN*RSRPLR
Trigger: CCTCAGTGGACGGGACCTGCAGTTCCTTCTTCGAGA...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCCAGCCATTACGCCTTaGCCATCAGTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVPAITP*PSVLPS
Trigger: GCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEGSQMS*LSWHTC
Trigger: GCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCCTGGCTGGGCTCTCTaGACAACACAGGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEPGWAL*TTQARP
Trigger: GGGACGTGCCTGTGTTGTCCAGAGAGCCCAGCCAGG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGAAGAGCCCCCTTCCCTaGACTTTGGTGCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGKSPLP*TLVPSE
Trigger: CTCTGATGGCACCAAAGTCCAGGGAAGGGGGCTCTT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGAGTGTTCAATGCTCCTaGAAGAGCCCAGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGSVQCS*KSPGEG
Trigger: GCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTCCATGCAGGGCAGTTaGAAGCCCCCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLSMQGS*KPPPQF
Trigger: AAACTGGGGAGGGGGCTTCCAACTGCCCTGCATGGA...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTACCTCAGCAAGTGCGTaGGTGGCAGGGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTTSASA*VAGNTG
Trigger: GCCTGTGTTCCCTGCCACCCACGCACTTGCTGAGGT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGTCAGTGAGCTGCACTaGGCTCCACTCCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLVSELH*APLPKG
Trigger: CCCCTTTGGGAGTGGAGCCCAGTGCAGCTCACTGAC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGTCAGGAACTGTAAGCTaGGGGGAAATCTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGSGTVS*GEIWLG
Trigger: GCCTAGCCAGATTTCCCCTCAGCTTACAGTTCCTGA...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS-3UTR TCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGCAGGTCCCGTCCACTaGGGATACCATGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLAGPVH*GYHGFS
Trigger: TGAAAAACCATGGTATCCTCAGTGGACGGGACCTGC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGTCCTTGGCCAGCTCTaGGCTTTGGCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTVLGQL*ALAGHL
Trigger: AAGGTGACCTGCCAAAGCTCAGAGCTGGCCAAGGAC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGGGCTGGAGGGAGGGTaGGTTTACCAGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVGLEGG*VYQKLQ
Trigger: TTGGAGTTTCTGGTAAACTCACCCTCCCTCCAGCCC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGGAACACAGGCTGGTTaGCACGTTGGCAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTGTQAG*HVGNQQ
Trigger: CTGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTTGGGAGTCTGATCCCTaGGGACAGGAGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALWESDP*GQEGPP
Trigger: GGGTGGCCCCTCCTGTCCTCAGGGATCAGACTCCCA...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGATTGCTTGGATCCATaGGTCAGCCATTCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGDCLDP*VSHSPD
Trigger: ATCCGGCGAATGGCTGACGCATGGATCCAAGCAATC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGTGCCAGGGACTTGATTaGTTGGATCCATGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGCQGLD*LDPCVS
Trigger: GCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCA...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGCTCTCCTGGCACACCTaGTTGCAGGACTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMLSWHT*LQDCPG
Trigger: GCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAG...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTCCTCTCCTCTTCCATaGAGGGCAGTTGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSSPLP*RAVGSP
Trigger: GGGGCTTCCAACTGCCCTGCATGGAAGAGGAGAGGA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCCACACCTCAGCAAGTaGGTGGGTGGCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEPHLSK*VGGREH
Trigger: GTGTTCCCTGCCACCCACGCACTTGCTGAGGTGTGG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCACCCTGTCAGTGAGCTaGACTGGGCTCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLTLSVS*TGLHSQ
Trigger: TTGGGAGTGGAGCCCAGTGCAGCTCACTGACAGGGT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGAGCTTCCAGGGGAGCTaGGCCCTCGTAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLSFQGS*ALVREP
Trigger: GGGTTCCCTTACGAGGGCCCAGCTCCCCTGGAAGCT...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTAACAGTCCACACATGTaGCCGCCCGATGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLNSPHM*PPDENF
Trigger: GAAGTTTTCATCGGGCGGCCACATGTGTGGACTGTT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTTGCAGAGAGCCACCTaGCCCTTGATGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILLQRAT*PLMKSR
Trigger: CCGGGACTTCATCAAGGGCCAGGTGGCTCTCTGCAA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTATGCCCTGGGGAGTTTaGCTGTGCTTCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLMPWGV*LCFQSK
Trigger: TTTGCTTTGGAAGCACAGCCAAACTCCCCAGGGCAT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCCTGGCTGGGCTCTCTaGACAACACAGGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLPGWAL*TTQARP
Trigger: GGGACGTGCCTGTGTTGTCCAGAGAGCCCAGCCAGG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCTCCTTTTTCGTCCCTaGCTGGGCTCTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLLLFRP*LGSLDN
Trigger: GTTGTCCAGAGAGCCCAGCCAGGGACGAAAAAGGAG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCCATGGTACTCTACCTaGCAGATGTGCTTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILPWYST*QMCLGA
Trigger: GGCCCCCAAGCACATCTGCCAGGTAGAGTACCATGG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGCAGCCTTGTTTCCTTaGGGGCTGAAGTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGAALFP*GLKSGI
Trigger: TATGCCAGACTTCAGCCCCCAAGGAAACAAGGCTGC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCCAGGACAGTACATTTaGACGGCGACACCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLPGQYI*TATPCL
Trigger: CAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGAGCTGCTTTCAGGCTaGGTTCGCTGCTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLELLSG*VRCWMV
Trigger: TACCATCCAGCAGCGAACTCAGCCTGAAAGCAGCTC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTGAGCTGCTTTCAGGCTaGGTTCGCTGCTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILELLSG*VRCWMV
Trigger: TACCATCCAGCAGCGAACTCAGCCTGAAAGCAGCTC...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGATCATAAGCTGTCATaGCTCCAGCGTATGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLDHKLS*LQRMAH
Trigger: ATGGGCCATACGCTGGAGTCATGACAGCTTATGATC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGCAGGTCCCGTCCACTaGGGATACCATGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVAGPVH*GYHGFS
Trigger: TGAAAAACCATGGTATCCTCAGTGGACGGGACCTGC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCTTCCTCCTGATTGTTaGGGTCAACAGTCCACACAT +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLLPPDC*GQQSTH
Trigger: ATGTGTGGACTGTTGACCTCAACAATCAGGAGGAAG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGGGCGCCTGCACAGCTaGAGAGCAGGAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALGRLHS*RAGGHL
Trigger: AAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCGCCC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTACAGGCACGTCCCCCTaGCTGAGGCAGCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGTGTSP*LRQPML
Trigger: GAGCATGGGCTGCCTCAGTCAGGGGGACGTGCCTGT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTACAATTGAGACGCACTaGGCAGGGATCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTTIETH*AGISVG
Trigger: GCCCACTGAGATCCCTGCTCAGTGCGTCTCAATTGT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCCTCTCCAGGATCACTaGCTAGACCTGGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEPLQDH*LDLGQV
Trigger: GACTTGGCCCAGGTCTAGTCAGTGATCCTGGAGAGG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTACAGGACGAGACTGCTaGTTTGGCGGAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLTGRDC*FGGTES
Trigger: GGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCCTGACACGCTGTCCTaGGAGGCGTGTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLPDTLS*EACRPP
Trigger: TGGAGGTCTACACGCCTCTCAGGACAGCGTGTCAGG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCTGGGTTGCTCGGAGTaGAGCAAGGGCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILLGCSE*SKGNAN
Trigger: ATTGGCATTGCCCTTGCTGCACTCCGAGCAACCCAG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCCATCTGTTTTGAGCTaGCAGGTCCCCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTPSVLS*QVPMAV
Trigger: GACAGCCATGGGGACCTGGCAGCTCAAAACAGATGG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAAGTGGGTTAAACTTTaGTCGGCCTGCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTKWVKL*SACRLP
Trigger: GGGGAGCCTGCAGGCCGAGCAAAGTTTAACCCACTT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGAGTGTGGGCTTGTTTaGTCCAAGAGCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLECGLV*SKSSCP
Trigger: AGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGGGTGGAAGTGCACATaGATACACGCTATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTGWKCT*IHAMAW
Trigger: CCAGGCCATAGCGTGTATGCATGTGCACTTCCACCC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGTGGCCACCGTGGTCTaGCCTAAAAGGCACACACCT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEVATVV*PKRHTP
Trigger: AGGTGTGTGCCTTTTAGGGCAGACCACGGTGGCCAC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCATCAACAGTGGCCCTaGCCACCACATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILHQQWP*PPHKHR
Trigger: CCTGTGCTTATGTGGTGGGCAGGGCCACTGTTGATG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTCCTCACTTCCATTCTaGTCCTTGTTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLSSLPF*SLLGSS
Trigger: GCTGCTGCCCAACAAGGAGCAGAATGGAAGTGAGGA...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCATGACTCCAGCGTATaGCCCATCCACCACATTCCT +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLHDSSV*PIHHIP
Trigger: AGGAATGTGGTGGATGGGCCATACGCTGGAGTCATG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGATGAGCTGGCTCTCCTaGCACACCTGCTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEMSWLS*HTCLQD
Trigger: GTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCAT...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAGACCCTCTGGTGCCTaGGGTGGGCGCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSRPSGA*GGRLHS
Trigger: GCTGTGCAGGCGCCCACCCCAGGCACCAGAGGGTCT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTGACAAGCCAGGCTCCTaGCCTGACATACGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILDKPGS*PDIRSC
Trigger: ACAAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTC...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTCTATGACGATGCCCTaGGGAGTTTGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVSMTMP*GVWLCF
Trigger: GAAGCACAGCCAAACTCCCCAGGGCATCGTCATAGA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTTTTTCGTCCCTGGCTaGGCTCTCTGGACAACACAG +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVFFVPG*ALWTTQ
Trigger: CTGTGTTGTCCAGAGAGCCCAGCCAGGGACGAAAAA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCAAGAGCCCCCTTCCCTaGACTTTGGTGCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLKSPLP*TLVPSE
Trigger: CTCTGATGGCACCAAAGTCCAGGGAAGGGGGCTCTT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCAGTGTTCAATGCTCCTaGAAGAGCCCAGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLSVQCS*KSPGEG
Trigger: GCCCTCTCCTGGGCTCTTCCAGGAGCATTGAACACT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGCAGCTGCCCTGTCAGTaGAACTCCGGCGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQQLPCQ*NSGALP
Trigger: TGGAAGTGCGCCGGAGTTCCACTGACAGGGCAGCTG...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCTTGGAGAAATGGGGTaGCCACCGTGGTCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMELGEMG*PPWSAL
Trigger: TAGGGCAGACCACGGTGGCCACCCCATTTCTCCAAG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGACCACCTTGGAGAAATaGGGTGGCCACCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMETTLEK*GGHRGL
Trigger: CAGACCACGGTGGCCACCCCATTTCTCCAAGGTGGT...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCTGGCAGGGTGGGGTTaGTTTTCTCCAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALLAGWG*FSPGGG
Trigger: GCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCATCCTCCATCAACAGTaGCCCTGCCCACCACATAAG +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVILHQQ*PCPPHK
Trigger: CTTATGTGGTGGGCAGGGCCACTGTTGATGGAGGAT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTGCGTAGCAGGGATCTaGACGCCACATGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVCVAGI*TPHVFH
Trigger: ATGAAAGACATGTGGCGTTCAGATCCCTGCTACGCA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGTCAGGAGTCCCAGGTaGACGAGGACTTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLVRSPR*TRTFFR
Trigger: GCGGAAGAAAGTCCTCGTTCACCTGGGACTCCTGAC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTCAAGAGGGCCACCACTaGAAGCTGTCTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILQEGHH*KLSLQS
Trigger: AGATTGCAGAGACAGCTTTCAGTGGTGGCCCTCTTG...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCAAGAGGGCCACCACTaGAAGCTGTCTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLQEGHH*KLSLQS
Trigger: AGATTGCAGAGACAGCTTTCAGTGGTGGCCCTCTTG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGGCCAACCTGATGACTaGTTACTCAACAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGGQPDD*LLNKSE
Trigger: CTCTGACTTGTTGAGTAATCAGTCATCAGGTTGGCC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTACATCATTGAGCGACTaGGGCGCCCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALTSLSD*GAQQRP
Trigger: TGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCACCACAGATCCTTTaGGCACCACCCCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSAPQIL*APPRPR
Trigger: GCGGGGACGGGGTGGTGCTCAAAGGATCTGTGGTGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTGGAGTTCAGGTGCTaGTCAACCACAAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTLEFRC*STTNPR
Trigger: TCTGGGGTTTGTGGTTGAGCAGCACCTGAACTCCAG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGCTATAGGCAGTCTTTaGAGAGAGCCACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEAIGSL*REPPGP
Trigger: AGGGCCAGGTGGCTCTCTGCAAAGACTGCCTATAGC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGCATTCATCCTGAGCTaGCCCCACTCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMAFILS*PHSPSR
Trigger: TCTGCTGGGGGAGTGGGGGCAGCTCAGGATGAATGC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTCCAGCAAATGATCCTTaGAGCTTTTGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLPANDP*SFWNTR
Trigger: CCTTGTGTTCCAAAAGCTGCAAGGATCATTTGCTGG...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGGAGGAGTCTGCTATTaGCCTTCAACAGCATCCGGA +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTGGVCY*PSTASG
Trigger: TCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGGAGGAGTCTGCTATTaGCCTTCAACAGCATCCGGA +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLGGVCY*PSTASG
Trigger: TCCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTCTCTGTGGGTGGAAGTaGACATGCATACACGCTATG +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLLCGWK*TCIHAM
Trigger: CATAGCGTGTATGCATGTGCACTTCCACCCACAGAG...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGGAAATTCCAGTCACTaGATCCACAGGACGAGACTG +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLGNSSH*IHRTRL
Trigger: CAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTAACTTCACCTGTCCTTaGCTCTTAACGCGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLNFTCP*LLTRRR
Trigger: TCTTCTACGCGTTAAGAGCCAAGGACAGGTGAAGTT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCAGAAAGCTGTTGTCTaGGGTATGAGGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLQKAVV*GMREHG
Trigger: ACCATGTTCCCTCATACCCCAGACAACAGCTTTCTG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAAGACCCTCTGGTGCCTaGGGTGGGCGCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTRPSGA*GGRLHS
Trigger: GCTGTGCAGGCGCCCACCCCAGGCACCAGAGGGTCT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCTGCCAGGTCCCCATaGCTGTCCCTGAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSAARSP*LSLSRP
Trigger: TGGCCTGCTCAGGGACAGCCATGGGGACCTGGCAGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTATGCCCTGGGGAGTTTaGCTGTGCTTCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLMPWGV*LCFQSK
Trigger: TTTGCTTTGGAAGCACAGCCAAACTCCCCAGGGCAT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCTTTTTCGTCCCTGGCTaGGCTCTCTGGACAACACAG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLFFVPG*ALWTTQ
Trigger: CTGTGTTGTCCAGAGAGCCCAGCCAGGGACGAAAAA...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCAGGGTTTGGAAGGTaGGGTCCAGTGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPGFGR*GPVCLT
Trigger: GGTCAGACACACTGGACCCCACCTTCCAAACCCTGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGCCATGGTACTCTACCTaGCAGATGTGCTTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQPWYST*QMCLGA
Trigger: GGCCCCCAAGCACATCTGCCAGGTAGAGTACCATGG...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGCAGAGGCCTCCCCATaGTACTCTACCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGAEASP*YSTWQM
Trigger: CATCTGCCAGGTAGAGTACCATGGGGAGGCCTCTGC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTTATCAAGATCAGCAATaGCAAAACCTCCGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLYQDQQ*QNLRRL
Trigger: AAGCCTGCGGAGGTTTTGCCATTGCTGATCTTGATA...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGATGGGGTGGCCACCGTaGTCTGCCCTAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGMGWPP*SALKGT
Trigger: TGTGCCTTTTAGGGCAGACCACGGTGGCCACCCCAT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGACCACCTTGGAGAAATaGGGTGGCCACCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQTTLEK*GGHRGL
Trigger: CAGACCACGGTGGCCACCCCATTTCTCCAAGGTGGT...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp TTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTaGCCCATCAGTTCTGCCCAGCGGAGGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: FPHILKATSHYA*PISSAQRRLHW
Trigger: CCAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTACAACTTCCACGGAGTaGAGAGAGCCATTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTTTSTE*REPLLS
Trigger: AGAGAGCAATGGCTCTCTTCACTCCGTGGAAGTTGT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGATCATAAGCTGTCATaGCTCCAGCGTATGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLDHKLS*LQRMAH
Trigger: ATGGGCCATACGCTGGAGTCATGACAGCTTATGATC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTTGTTCCGGTGCCATTaGCAACAAGATTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLFRCH*QQDCPP
Trigger: AGGTGGACAATCTTGTTGTCAATGGCACCGGAACAA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTGCGTAGCAGGGATCTaGACGCCACATGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILCVAGI*TPHVFH
Trigger: ATGAAAGACATGTGGCGTTCAGATCCCTGCTACGCA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTCCTCTACTTCCTCCTaGTTGTTGAGGTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLSSTSS*LLRSTV
Trigger: GACTGTTGACCTCAACAATCAGGAGGAAGTAGAGGA...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCCCCATGGCTGTCCCTaGGCAGGCCACCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLPHGCP*AGHQPH
Trigger: GTGGGGCTGGTGGCCTGCTCAGGGACAGCCATGGGG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCAGAGTGATCCTGCCTaGAGGAAAAGCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLQSDPA*RKSQHQ
Trigger: CTGGTGCTGGCTTTTCCTTCAGGCAGGATCACTCTG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCTTTCCCTCACATTCTaGAAGCTACCAGCCATTACG +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLSLTF*KLPAIT
Trigger: CGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGACAATTGAGACGCACTaGGCAGGGATCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQTIETH*AGISVG
Trigger: GCCCACTGAGATCCCTGCTCAGTGCGTCTCAATTGT...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGACTGGAGATACAATTaGGACGCACTGAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLDWRYN*DALSRD
Trigger: ATCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCAGTGAAGAGAGCCATTaGTCTCTGGCAACTTCACCT +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVSEESH*SLATSP
Trigger: AGGTGAAGTTGCCAGAGAGCAATGGCTCTCTTCACT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGATTGCTTGGATCCATaGGTCAGCCATTCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEDCLDP*VSHSPD
Trigger: ATCCGGCGAATGGCTGACGCATGGATCCAAGCAATC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGTCACTGGAGTTCAGGTaGTGCTCAACCACAAACCCC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMESLEFR*CSTTNP
Trigger: GGGGTTTGTGGTTGAGCAGCACCTGAACTCCAGTGA...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGGTGGCCACATCACTTaGCCATGGCAGAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGGGHIT*PWQKSC
Trigger: ACAGGACTTCTGCCATGGGCAAGTGATGTGGCCACC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGGTGGCCACATCACTTaGCCATGGCAGAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQGGHIT*PWQKSC
Trigger: ACAGGACTTCTGCCATGGGCAAGTGATGTGGCCACC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCCTGGGGTGGGCGCCTaGACAGCTGAAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESPGVGA*TAEEQE
Trigger: CTCCTGCTCTTCAGCTGTGCAGGCGCCCACCCCAGG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCATCTGTTTTGAGCTaGCAGGTCCCCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPSVLS*QVPMAV
Trigger: GACAGCCATGGGGACCTGGCAGCTCAAAACAGATGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCACTGGCCCAGGGATTaGAGGTCAGGGAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALHWPRD*RSGNSS
Trigger: GCTAGAGTTCCCTGACCTGCAATCCCTGGGCCAGTG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGGAAATTCCAGTCACTaGATCCACAGGACGAGACTG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLGNSSH*IHRTRL
Trigger: CAGTCTCGTCCTGTGGATGCAGTGACTGGAATTTCC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTCCTTGTTGAGGTGCTaGAAGAAAGAAGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSLLRC*KKEGSQ
Trigger: CTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCTCCTTTTTCGTCCCTaGCTGGGCTCTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLLLFRP*LGSLDN
Trigger: GTTGTCCAGAGAGCCCAGCCAGGGACGAAAAAGGAG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCCCTTCCCTGGACTTTaGTGCCATCAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALPFPGL*CHQRGH
Trigger: GTGTCCCCTCTGATGGCACCAAAGTCCAGGGAAGGG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGATTCTCAGCCAGGTCTaGAGGCGCCCCTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLILSQV*RRPCDD
Trigger: ATCATCACAGGGGCGCCTCCAGACCTGGCTGAGAAT...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTGTAGCAGTGGCTAAGTaGGTTAAACTTTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTVAVAK*VKLCSA
Trigger: GGCCGAGCAAAGTTTAACCCACTTAGCCACTGCTAC...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCTTCAACAGCTACAGTaGCTCAAGAACATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGLQQLQ*LKNMSC
Trigger: ACAGGACATGTTCTTGAGCCACTGTAGCTGTTGAAG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTAGGGTTCTCCAGCCGTaGGGTCAGGGTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGRVLQP*GQGGIE
Trigger: CTCAATGCCACCCTGACCCCACGGCTGGAGAACCCT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp GGCCTGCAGGCTCCCCCTGTTGGTCAGATACTTGCATaGACATCCTCAGTGTTCAATGCTCCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLQAPPVGQILA*TSSVFNAPGRA
Trigger: GGCTCTTCCAGGAGCATTGAACACTGAGGATGTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGAGTTGGCTTGCCAATaGAAAAGTCTGTGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLELACQ*KSLCFC
Trigger: GCAAAAACACAGACTTTTTCATTGGCAAGCCAACTC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCTGTCCTTGTCCTTGTTaGGGTGCTGGAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLCPCPC*GAGRKK
Trigger: CTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACA...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTCTAGGTGCCATCTATaGCGATGCCCTGGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGSRCHL*RCPGEF
Trigger: AAACTCCCCAGGGCATCGTCATAGATGGCACCTAGA...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGTCTAGGTGCCATCTATaGCGATGCCCTGGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQSRCHL*RCPGEF
Trigger: AAACTCCCCAGGGCATCGTCATAGATGGCACCTAGA...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAGAGCATGGCAGCAATaGTTCAGTGGGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGRAWQQ*FSGVGT
Trigger: AGTTCCCACCCCACTGAATCATTGCTGCCATGCTCT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGACTGGAGATACAATTaGGACGCACTGAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEDWRYN*DALSRD
Trigger: ATCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTCCTCTCCAGGATCACTaGCTAGACCTGGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGPLQDH*LDLGQV
Trigger: GACTTGGCCCAGGTCTAGTCAGTGATCCTGGAGAGG...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCCTGACACGCTGTCCTaGGAGGCGTGTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSPDTLS*EACRPP
Trigger: TGGAGGTCTACACGCCTCTCAGGACAGCGTGTCAGG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTCCTCACTTCCATTCTaGTGTGAAGGAGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVSSLPF*CEGGEE
Trigger: TTCTTCTCCTCCTTCACAGCAGAATGGAAGTGAGGA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCTGCTGGATGGTAAAGTaGAGAAGCATCATACCCCAA +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVCWMVK*RSIIPQ
Trigger: TTGGGGTATGATGCTTCTGCACTTTACCATCCAGCA...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGGGCAGACCCTCTGGTaGCTGGGGTGGGCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMGQTLW*LGWAPA
Trigger: TGCAGGCGCCCACCCCAGGCACCAGAGGGTCTGCCC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGCTATAGGCAGTCTTTaGAGAGAGCCACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALAIGSL*REPPGP
Trigger: AGGGCCAGGTGGCTCTCTGCAAAGACTGCCTATAGC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTTTGCCCTGGAGCAGCTaGAGTGACAGTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALLPWSS*SDSLPT
Trigger: TGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCAA...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCCAGATTCCCACCTTTaGGAGCTACACCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALPDSHL*ELHPQV
Trigger: CACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCATCTGCCCTCCTACTaGAGGAAACTGCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGHLPSY*RKLPLL
Trigger: AAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTATCTATCCAGAGTTGTaGCAAGACAGGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTIYPEL*QDRAGD
Trigger: ATCTCCTGCCCTGTCTTGGCACAACTCTGGATAGAT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCATGACTCCAGCGTATaGCCCATCCACCACATTCCT +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLHDSSV*PIHHIP
Trigger: AGGAATGTGGTGGATGGGCCATACGCTGGAGTCATG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCAGGGACTTGATTGCTTaGATCCATGCGTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLRDLIA*IHASAI
Trigger: AATGGCTGACGCATGGATCCAAGCAATCAAGTCCCT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGGTTTTTCACGTAACTaGGAATATTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLGFSRN*EYSLCW
Trigger: CCAGCACAAAGAATATTCCCAGTTACGTGAAAAACC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGAACAGTCCACACATGTaGCCGCCCGATGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMENSPHM*PPDENF
Trigger: GAAGTTTTCATCGGGCGGCCACATGTGTGGACTGTT...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGSQMS*LSWHTC
Trigger: GCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTCTATGACGATGCCCTaGGGAGTTTGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGSMTMP*GVWLCF
Trigger: GAAGCACAGCCAAACTCCCCAGGGCATCGTCATAGA...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCCTGGCAGATGTGCTTaGGGGCCACCTAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSPGRCA*GPPKEW
Trigger: CCACTCCTTAGGTGGCCCCCAAGCACATCTGCCAGG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTAGGAGAGGGCGGCACTaGCCCAGGGATTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESRRGRH*PRDCRS
Trigger: TGACCTGCAATCCCTGGGCCAGTGCCGCCCTCTCCT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGTCCTGTCTCTTAGCTaGAGGAGTCTGCTATTGCCC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGVLSLS*RSLLLP
Trigger: GGGCAATAGCAGACTCCTCCAGCTAAGAGACAGGAC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGCAAAGGGACCTGCCTaGGGAATGTGTAAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLAKGPA*GMCKFN
Trigger: ATTGAACTTACACATTCCCCAGGCAGGTCCCTTTGC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCAGGCTCCACAAAATCTaGGCTACAGAGATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLRLHKI*ATEMLC
Trigger: GCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp GGTAGACCCAAAGGTATGGCAGAATCCAGCCCTTTCTaGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRPKGMAESSPF*RFSRLHTLLCG
Trigger: CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAAAAAGCCCAGCTTCTaGGAGGACAACTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGKKPSF*EDNFHG
Trigger: TCCGTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTTT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTGTCTTTCATCCACTTaGTCTTTCCCTCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILCLSST*SFPHSE
Trigger: CTCACTGTGAGGGAAAGATCAAGTGGATGAAAGACA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTGCTCTCCAAGGTAAATaGGGACACCAATTTTCAACC +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILALQGK*GHQFST
Trigger: GGTTGAAAATTGGTGTCCTCATTTACCTTGGAGAGC...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTGCTTTTGGGTGGGTTaGACTTGGGATTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTCFWVG*TWDSEK
Trigger: CTTTTCTGAATCCCAAGTTCAACCCACCCAAAAGCA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGAGTTGGCTTGCCAATaGAAAAGTCTGTGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLELACQ*KSLCFC
Trigger: GCAAAAACACAGACTTTTTCATTGGCAAGCCAACTC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCATGTGGCCGCCCGATaGAAACTTCAGCGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALHVAAR*KLQRKD
Trigger: ATCCTTACGCTGAAGTTTTCATCGGGCGGCCACATG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAAGAAGGCTCGCAGATaGGCTGGCTCTCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSKKARR*AGSPGT
Trigger: TGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAGCATGGTGCAGGGCTaGGCAGGTAGCTGCTATAGG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSSMVQG*AGSCYR
Trigger: CCTATAGCAGCTACCTGCTCAGCCCTGCACCATGCT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAGCATGGTGCAGGGCTaGGCAGGTAGCTGCTATAGG +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSSMVQG*AGSCYR
Trigger: CCTATAGCAGCTACCTGCTCAGCCCTGCACCATGCT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCCCACAGTTGCTCCTTaGGAAACAGAAATGATGTTG +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLPTVAP*ETEMML
Trigger: CAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGCTGCCATCTGTTTTaGGCTGCCAGGTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSCCHLF*AARSPW
Trigger: CCATGGGGACCTGGCAGCTCAAAACAGATGGCAGCA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAACTGTAATGAGCAGTaGCACAAACCCAGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTNCNEQ*HKPSPN
Trigger: GTTTGGACTGGGTTTGTGTCACTGCTCATTACAGTT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATGGGAGTCTGATCCCTaGGGACAGGAGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPWESDP*GQEGPP
Trigger: GGGTGGCCCCTCCTGTCCTCAGGGATCAGACTCCCA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTACAGGACGAGACTGCTaGTTTGGCGGAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALTGRDC*FGGTES
Trigger: GGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACTGAGGTCCAGGATCTaGTCGCGCAGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLRSRI*SRSMEL
Trigger: CAGCTCCATGCTGCGCGAGCAGATCCTGGACCTCAG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCCTTCGACTCCAACTTaGCAATGCGCTGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEPSTPT*QCAAKC
Trigger: ACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTGCCAGGGACTTGATTaGTTGGATCCATGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMCQGLD*LDPCVS
Trigger: GCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTCTTTTCAAGGTTCTaGTTTTCTGCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTLFSRF*FSARDL
Trigger: CAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAGAG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGCTCTCTCCTGCACCCTaGCCAAAGCAGACAGAACAA +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMLSPAP*PKQTEQ
Trigger: TTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAG...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGCCAGGACAGGGCACTaGATTCATCCTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESARTGH*IHPELP
Trigger: GGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGCCAGGACAGGGCACTaGATTCATCCTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTARTGH*IHPELP
Trigger: GGGCAGCTCAGGATGAATGCAGTGCCCTGTCCTGGC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTAGGATGCCAGTCATCTaGCCTCCTACTGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALRMPVI*PPTAGN
Trigger: GTTTCCTGCAGTAGGAGGGCAGATGACTGGCATCCT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGTCCTTACAGCAAGGATaGCAGTCATCTGCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQSLQQG*QSSALL
Trigger: TAGGAGGGCAGATGACTGGCATCCTTGCTGTAAGGA...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTGCTCCAAGAGCAGCTaGCCTGTCAGTGGAACTCCG +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSCSKSS*PVSGTP
Trigger: CGGAGTTCCACTGACAGGGCAGCTGCTCTTGGAGCA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCACATGAAGATGCTCTaGAGCTCCACAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGHMKML*SSTGMD
Trigger: ATCCATCCCTGTGGAGCTGCAGAGCATCTTCATGTG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTCAAGGGGTGCAGTCTaGCAGAGAACCCATTTTAAT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSRGAV*QRTHFN
Trigger: ATTAAAATGGGTTCTCTGGCAGACTGCACCCCTTGA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTTCTGTCTCCTACAGTTaGGCAGCCAGATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALSVSYS*AARSVS
Trigger: GGAAACCGATCTGGCTGCCCAACTGTAGGAGACAGA...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTATTTCATTAATGTGGTaGATATCACTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLISLMW*ISLEFR
Trigger: CCTGAACTCCAGTGATATCCACCACATTAATGAAAT...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTTTGCTGCTTTTGGGTaGGTTGAACTTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILFAAFG*VELGIQ
Trigger: CTGAATCCCAAGTTCAACCCACCCAAAAGCAGCAAA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTCTGGGCATGGGGACATaGAGGAAAGGGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSLGMGT*RKGASS
Trigger: AGATGAGGCCCCTTTCCTCCATGTCCCCATGCCCAG...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCTCCTGTCCAAATCTTaGCTCAAAGATAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLLSKS*LKDNPL
Trigger: GAGAGGATTATCTTTGAGCCAAGATTTGGACAGGAG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAATGCCCTAAACAACTaGAGTGTGGGCTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTNALNN*SVGLFA
Trigger: AGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTATCAAGATCAGCAATaGCAAAACCTCCGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILYQDQQ*QNLRRL
Trigger: AAGCCTGCGGAGGTTTTGCCATTGCTGATCTTGATA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAACAGCTACAGTaGCTCAAGAACATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTLQQLQ*LKNMSC
Trigger: ACAGGACATGTTCTTGAGCCACTGTAGCTGTTGAAG...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGTTATAGGGAGCGTCTaGTGTCCAGCTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGVIGSV*CPASTA
Trigger: AGCTGTTGAAGCTGGACACCAGACGCTCCCTATAAC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGACCCTCCTCTGTGGGTaGAAGTGCACATGCATACAC +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMTLLCG*KCTCIH
Trigger: GTGTATGCATGTGCACTTCCACCCACAGAGGAGGGT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTATGGGGTGGCCACCGTaGTCTGCCCTAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSMGWPP*SALKGT
Trigger: TGTGCCTTTTAGGGCAGACCACGGTGGCCACCCCAT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTATCCTCCATCAACAGTaGCCCTGCCCACCACATAAG +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALILHQQ*PCPPHK
Trigger: CTTATGTGGTGGGCAGGGCCACTGTTGATGGAGGAT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGTTGTTCCGGTGCCATTaGCAACAAGATTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQLFRCH*QQDCPP
Trigger: AGGTGGACAATCTTGTTGTCAATGGCACCGGAACAA...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGTCAGGAGTCCCAGGTaGACGAGGACTTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTVRSPR*TRTFFR
Trigger: GCGGAAGAAAGTCCTCGTTCACCTGGGACTCCTGAC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGTCCAAGAGTTTTCTTaGATTGAGCAAGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVVQEFS*IEQVLQ
Trigger: TTGTAGGACTTGCTCAATTCAAGAAAACTCTTGGAC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACATCATTGAGCGACTaGGGCGCCCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTSLSD*GAQQRP
Trigger: TGGCCTCTGCTGGGCGCCTCAGTCGCTCAATGATGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGAAAACATTCAGTCATaGGCAGCCTCTAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQENIQS*AASRSC
Trigger: ACAGCTCCTAGAGGCTGCTCATGACTGAATGTTTTC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGGGTCAGGGTGGCATTaGGGGAGTGTCTTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTGSGWH*GSVLRL
Trigger: GAGCCTTAAGACACTCCCTCAATGCCACCCTGACCC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAAGACGTCAAGGTTGTaGCAGCAACTACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGKTSRL*QQLQWK
Trigger: CTTCCACTGTAGTTGCTGTCACAACCTTGACGTCTT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGAGTGAAGAGAGCCATTaGTCTCTGGCAACTTCACCT +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQSEESH*SLATSP
Trigger: AGGTGAAGTTGCCAGAGAGCAATGGCTCTCTTCACT...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCATTCCTGTTTTCTTCTaGCAGTGCCTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLIPVFF*QCLDVP
Trigger: AGGTACATCAAGGCACTGGCAGAAGAAAACAGGAAT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCTTCGACTCCAACTTaGCAATGCGCTGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPSTPT*QCAAKC
Trigger: ACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTTCACTGGAGTTCAGGTaGTGCTCAACCACAAACCCC +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGSLEFR*CSTTNP
Trigger: GGGGTTTGTGGTTGAGCAGCACCTGAACTCCAGTGA...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGAGAAGCTATCCACTTTaGCATACACAAGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMERSYPL*HTQGTG
Trigger: ACCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCT...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCTGGGTTGCTCGGAGTaGAGCAAGGGCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSLGCSE*SKGNAN
Trigger: ATTGGCATTGCCCTTGCTGCACTCCGAGCAACCCAG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAACACGGTCTCTCTCCTaGACCCTGCCCAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTTRSLS*TLPKAD
Trigger: GTCTGCTTTGGGCAGGGTGCAGGAGAGAGACCGTGT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACTTGCCCATCAGTTCTaGCCAGCGGAGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLAHQF*PAEAPL
Trigger: CAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACCAGCCATTACGCCTTaGCCATCAGTTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTPAITP*PSVLPS
Trigger: GCTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTCATCTGCCCTCCTACTaGAGGAAACTGCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGHLPSY*RKLPLL
Trigger: AAGCAAGGGCAGTTTCCTGCAGTAGGAGGGCAGATG...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATCCTCTCCTCTTCCATaGAGGGCAGTTGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTSSPLP*RAVGSP
Trigger: GGGGCTTCCAACTGCCCTGCATGGAAGAGGAGAGGA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTAGTGTGAGAGTCTGCTaGTCTCACTCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGSVRVC*SHSGSC
Trigger: ACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATCTGCTCGCGCAGCATaGAGCTGCTTTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTSARAA*SCFQAE
Trigger: CTCAGCCTGAAAGCAGCTCCATGCTGCGCGAGCAGA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCGAAATCCTAATGTCATaGCCCAGTAAGTACAGAGAT +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVEILMS*PSKYRD
Trigger: ATCTCTGTACTTACTGGGCCATGACATTAGGATTTC...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCCATACACAAGGGACTaGTTCTGCCTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLPYTRD*FCLLIS
Trigger: TGAAATCAAAAGGCAGAACCAGTCCCTTGTGTATGG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTATGAGCTGGCTCTCCTaGCACACCTGCTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESMSWLS*HTCLQD
Trigger: GTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCAT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGACAAGCCAGGCTCCTaGCCTGACATACGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSDKPGS*PDIRSC
Trigger: ACAAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTAATGATTCAGTGGGGTaGGAACTTATACAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILNDSVG*ELIQRQ
Trigger: CTGCCTTTGTATAAGTTCCCACCCCACTGAATCATT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGCAGCAATGATTCAGTaGGGTGGGAACTTATACAAA +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLAAMIQ*GGNLYK
Trigger: TTTGTATAAGTTCCCACCCCACTGAATCATTGCTGC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTATTCTCAGCCAGGTCTaGAGGCGCCCCTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSILSQV*RRPCDD
Trigger: ATCATCACAGGGGCGCCTCCAGACCTGGCTGAGAAT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGTTATAGGGAGCGTCTaGTGTCCAGCTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMVIGSV*CPASTA
Trigger: AGCTGTTGAAGCTGGACACCAGACGCTCCCTATAAC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGCTGGTTGACACGTTaGCAACCAGCAGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGWLTR*QPAVPR
Trigger: CCTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCAGGGAACACAGGCTaGTTGACACGTTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSAGNTG*LTRWQP
Trigger: TGGTTGCCAACGTGTCAACCAGCCTGTGTTCCCTGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAAGGGTTCTCCAGCCGTaGGGTCAGGGTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLRVLQP*GQGGIE
Trigger: CTCAATGCCACCCTGACCCCACGGCTGGAGAACCCT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGTTTTCTCTACAACAGTaGAAAACAAAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLFSLQQ*KTKQCS
Trigger: AGAGCACTGCTTTGTTTTCCACTGTTGTAGAGAAAA...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTAAAAAGCCCAGCTTCTaGGAGGACAACTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGKKPSF*EDNFHG
Trigger: TCCGTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTTT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTGTCCTTGTCCTTGTTaGGGTGCTGGAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMCPCPC*GAGRKK
Trigger: CTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGAGCAGGAGGTCACCTTaGAACACACAGTGCTTATTC +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMSRRSP*NTQCLF
Trigger: GAATAAGCACTGTGTGTTTCAAGGTGACCTCCTGCT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACTGGAGCAGCTGCAGTaGCAGTCTTCCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLEQLQ*QSSHSC
Trigger: GCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGGCCAACCTGATGACTaGTTACTCAACAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALGQPDD*LLNKSE
Trigger: CTCTGACTTGTTGAGTAATCAGTCATCAGGTTGGCC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACTCCAAGCAGGGCCCTaGACTCCTTGGATGCACCCA +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPLQAGP*TPWMHP
Trigger: TGGGTGCATCCAAGGAGTTCAGGGCCCTGCTTGGAG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTATCCGTCTACTCACATaGAGATGCTCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGIRLLT*RCSAAP
Trigger: TGGAGCTGCAGAGCATCTTCATGTGAGTAGACGGAT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCTCAAAAATGTTCCTTaGGGAAAACCCTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLLKNVP*GKPLEC
Trigger: ACATTCCAAGGGTTTTCCTCAAGGAACATTTTTGAG...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGCACCACAGATCCTTTaGGCACCACCCCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTAPQIL*APPRPR
Trigger: GCGGGGACGGGGTGGTGCTCAAAGGATCTGTGGTGC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTATTAATTTTCTCAAGTaGAACCAAGCTGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILINFLK*NQAGNS
Trigger: GCTGTTCCCAGCTTGGTTGCACTTGAGAAAATTAAT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGGAGCCATAAACAGTTaGATGCACTTCCATGTATGT +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEGAINS*MHFHVC
Trigger: ACATACATGGAAGTGCATGCAACTGTTTATGGCTCC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATCTCGAAGAAGGAACTaGAGGTCCCGTCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTSRRRN*RSRPLR
Trigger: CCTCAGTGGACGGGACCTGCAGTTCCTTCTTCGAGA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTTTGTCCTTGTTGAGGTaGTGGAAGAAAGAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALLSLLR*WKKEGS
Trigger: CGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAA...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTTGCCCTGGAGCAGCTaGAGTGACAGTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESLPWSS*SDSLPT
Trigger: TGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCAA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGTGGGGAGTTTGGCTGTaGTTCCAAAGCAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQWGVWL*FQSKSF
Trigger: GAAACTTTTGCTTTGGAAGCACAGCCAAACTCCCCA...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGTGGGGAGTTTGGCTGTaGTTCCAAAGCAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLWGVWL*FQSKSF
Trigger: GAAACTTTTGCTTTGGAAGCACAGCCAAACTCCCCA...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTTCCCTGGACTTTGGTaGCATCAGAGGGGACACAAC +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSFPGLW*HQRGHN
Trigger: GTTGTGTCCCCTCTGATGGCACCAAAGTCCAGGGAA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTATCCTCAGTGTTCAATaGTCCTGGAAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGILSVQ*SWKSPG
Trigger: TCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGAT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCTGTTGGTCAGATACTTaGATTGACATCCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLCWSDT*IDILSV
Trigger: AACACTGAGGATGTCAATGCAAGTATCTGACCAACA...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCATACACAAAATAAATaGGGTGTTTACCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGHTQNK*GVYQHS
Trigger: TGAATGCTGGTAAACACCGCATTTATTTTGTGTATG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGCTCCATTTATACATGTaGAAATCAAACTGCATACAC +
Preference number: 4 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGLHLYM*KSNCIH
Trigger: GTGTATGCAGTTTGATTTGCACATGTATAAATGGAG...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGAGTTCATAAATTCTTaGAGCCTTGTTTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEEFINS*SLVSLG
Trigger: CCCCAAGGAAACAAGGCTGCAAGAATTTATGAACTC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTAATTTGATGGAAACATaGAGAACTAACCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILNLMET*RTNQSG
Trigger: CCCAGACTGGTTAGTTCTGCATGTTTCCATCAAATT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCTGCTGGTCTCACTCTaGCTCCTGTGTCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESLLVSL*LLCQLV
Trigger: AACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGAAATCCTAATGTCATaGCCCAGTAAGTACAGAGAT +
Preference number: 4 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLEILMS*PSKYRD
Trigger: ATCTCTGTACTTACTGGGCCATGACATTAGGATTTC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTCTGTCTCCTACAGTTaGGCAGCCAGATCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSSVSYS*AARSVS
Trigger: GGAAACCGATCTGGCTGCCCAACTGTAGGAGACAGA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGGGTATGAGGGAACATaGTATAAAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLGYEGT*YKTAEG
Trigger: ACCCTCAGCAGTTTTATACCATGTTCCCTCATACCC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTATTTCATTAATGTGGTaGATATCACTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLISLMW*ISLEFR
Trigger: CCTGAACTCCAGTGATATCCACCACATTAATGAAAT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGTTGATTTCATTAATGTaGTGGATATCACTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLLISLM*WISLEF
Trigger: GAACTCCAGTGATATCCACCACATTAATGAAATCAA...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCAGCTCTCTCAGAGTTaGCTTGCCAATGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLQLSQS*LANEKV
Trigger: GACTTTTTCATTGGCAAGCCAACTCTGAGAGAGCTG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCACATCACTTGCCCATaGCAGAAGTCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRGVRVALRECLKAPQNLHITCP*QKSCFS
Trigger: TGAAAAACAGGACTTCTGCCATGGGCAAGTGATGTG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGTATGTGTCTGGGCATaGGGACATGGAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESVCVWA*GHGGKG
Trigger: CCCCTTTCCTCCATGTCCCCATGCCCAGACACATAC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGCCAAGGTATGTGTCTaGGCATGGGGACATGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESAKVCV*AWGHGG
Trigger: TCCTCCATGTCCCCATGCCCAGACACATACCTTGGC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAGGAGAGGGCGGCACTaGCCCAGGGATTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMRRGRH*PRDCRS
Trigger: TGACCTGCAATCCCTGGGCCAGTGCCGCCCTCTCCT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAAGTCTGAGGAGGCCTaGGAGCCAGTACACATTCAG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSKSEEA*EPVHIQ
Trigger: CTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTCTAGGTAAACCACCTTaGAGAAATGGGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSLGKPP*RNGVAT
Trigger: GGTGGCCACCCCATTTCTCCAAGGTGGTTTACCTAG...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTCTGAAAGACGTCAGTaGGGTAAGGTCCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMSERRQ*GKVQYV
Trigger: CACATACTGGACCTTACCCCACTGACGTCTTTCAGA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCTTGAGGAAAACCCTTaGAATGTTCTGAAAGACGTC +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMELEENP*NVLKDV
Trigger: GACGTCTTTCAGAACATTCCAAGGGTTTTCCTCAAG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGACGAGACTGCTGATTTaGCGGAACAGAATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMTRLLI*RNRIQR
Trigger: CCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTGGTTCAATATCTTATaGTTCAGGAACTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTWFNIL*FRNCKL
Trigger: CAGCTTACAGTTCCTGAATCATAAGATATTGAACCA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS-3UTR TCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTACTTCCATTCTGCTGTaGAGGAGGAGAAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALTSILL*RRRRIS
Trigger: GCTAATTCTTCTCCTCCTTCACAGCAGAATGGAAGT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCATCCGTCTACTCACATaGAGATGCTCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSIRLLT*RCSAAP
Trigger: TGGAGCTGCAGAGCATCTTCATGTGAGTAGACGGAT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTAAAAGCACATCCATTTaGGATAGCTTCCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGKSTSI*DSFQGS
Trigger: GCTCCCCTGGAAGCTATCGCAAATGGATGTGCTTTT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTCTTGAGACTTTCTTTTaGCCTGGAGCAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSLETFF*PGAAAV
Trigger: CACTGCAGCTGCTCCAGGGCAAAAGAAAGTCTCAAG...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCTTGCCCATCAGTTCTaGCCAGCGGAGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLAHQF*PAEAPL
Trigger: CAGTGGAGCCTCCGCTGGGCAGAACTGATGGGCAAG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCTCCATTTATACATGTaGAAATCAAACTGCATACAC +
Preference number: 4 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVLHLYM*KSNCIH
Trigger: GTGTATGCAGTTTGATTTGCACATGTATAAATGGAG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGGGTGGAAGTGCACATaGATACACGCTATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLGWKCT*IHAMAW
Trigger: CCAGGCCATAGCGTGTATGCATGTGCACTTCCACCC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAGTGGCCACCGTGGTCTaGCCTAAAAGGCACACACCT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPVATVV*PKRHTP
Trigger: AGGTGTGTGCCTTTTAGGGCAGACCACGGTGGCCAC...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCACATGAAGATGCTCTaGAGCTCCACAGGGATGGAT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSHMKML*SSTGMD
Trigger: ATCCATCCCTGTGGAGCTGCAGAGCATCTTCATGTG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACATCAACAGTGGCCCTaGCCACCACATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLHQQWP*PPHKHR
Trigger: CCTGTGCTTATGTGGTGGGCAGGGCCACTGTTGATG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGAAGAATTAGCCAAGTaGTCATGGCACAATACAGCA +
Preference number: 4 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQEELAK*SWHNTA
Trigger: TGCTGTATTGTGCCATGACCACTTGGCTAATTCTTC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTAGTGTGAGAGTCTGCTaGTCTCACTCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESSVRVC*SHSGSC
Trigger: ACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTAACTTCACCTGTCCTTaGCTCTTAACGCGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALNFTCP*LLTRRR
Trigger: TCTTCTACGCGTTAAGAGCCAAGGACAGGTGAAGTT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTCAGAAAGCTGTTGTCTaGGGTATGAGGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGQKAVV*GMREHG
Trigger: ACCATGTTCCCTCATACCCCAGACAACAGCTTTCTG...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCCATACACAAGGGACTaGTTCTGCCTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGPYTRD*FCLLIS
Trigger: TGAAATCAAAAGGCAGAACCAGTCCCTTGTGTATGG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAGCACCAGGATGTCCTTaGCCAGCTCTGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPAPGCP*PALSFG
Trigger: GCCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGC...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTAGSPC*SDTCID
Trigger: GTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCCAGGACAGTACATTTaGACGGCGACACCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSPGQYI*TATPCL
Trigger: CAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTTTTCTCTACAACAGTaGAAAACAAAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILFSLQQ*KTKQCS
Trigger: AGAGCACTGCTTTGTTTTCCACTGTTGTAGAGAAAA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp TCTTCAGATAATGCCCTAAACAACTGGAGTGTGGGCTaGTTTGCTCCAAGAGCAGCTGCCCTGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSDNALNNWSVG*FAPRAAALSVE
Trigger: TTCCACTGACAGGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATTATCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTGTAGTGGAGTTGGTTaGGTTTGTTCCGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSCSGVG*VCSGAI
Trigger: AATGGCACCGGAACAAACTCAACCAACTCCACTACA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGTAGTGGAGTTGGTTaGGTTTGTTCCGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSCSGVG*VCSGAI
Trigger: AATGGCACCGGAACAAACTCAACCAACTCCACTACA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGTCCAAGAGTTTTCTTaGATTGAGCAAGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGVQEFS*IEQVLQ
Trigger: TTGTAGGACTTGCTCAATTCAAGAAAACTCTTGGAC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAGCCAGGCTCCTGGCCTaGCATACGCTCTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPARLLA*HTLLFC
Trigger: ACAAAACAAGAGCGTATGTCAGGCCAGGAGCCTGGC...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGGGCTGGAGGGAGGGTaGGTTTACCAGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLGLEGG*VYQKLQ
Trigger: TTGGAGTTTCTGGTAAACTCACCCTCCCTCCAGCCC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGGACAGCCAGCAAATaGTCCTTGCAGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGTASK*SLQLLE
Trigger: TTCCAAAAGCTGCAAGGATCATTTGCTGGCTGTCCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAATCCAGCCCTTTCTTaGGGTTCTCAAGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSNPALS*GSQGFT
Trigger: TGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGGAGCCATAAACAGTTaGATGCACTTCCATGTATGT +
Preference number: 4 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMGAINS*MHFHVC
Trigger: ACATACATGGAAGTGCATGCAACTGTTTATGGCTCC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAAACTTTGCTCGGCCTaGAGGCTCCCCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMKLCSA*RLPLLV
Trigger: GACCAACAGGGGGAGCCTGCAGGCCGAGCAAAGTTT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACTCTGTGGGTGGAAGTaGACATGCATACACGCTATG +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLCGWK*TCIHAM
Trigger: CATAGCGTGTATGCATGTGCACTTCCACCCACAGAG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCCACACCTCAGCAAGTaGGTGGGTGGCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTPHLSK*VGGREH
Trigger: GTGTTCCCTGCCACCCACGCACTTGCTGAGGTGTGG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCTGCTGGTCTCACTCTaGCTCCTGTGTCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLLLVSL*LLCQLV
Trigger: AACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCCAGCTCTGAGCTTTaGCAGGTCACCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLASSEL*QVTLYF
Trigger: GAAGTACAAGGTGACCTGCCAAAGCTCAGAGCTGGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGCCAAGGTATGTGTCTaGGCATGGGGACATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLAKVCV*AWGHGG
Trigger: TCCTCCATGTCCCCATGCCCAGACACATACCTTGGC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCCCTTCCCTGGACTTTaGTGCCATCAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMPFPGL*CHQRGH
Trigger: GTGTCCCCTCTGATGGCACCAAAGTCCAGGGAAGGG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCCAGGGTTTGGAAGGTaGGGTCCAGTGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMPGFGR*GPVCLT
Trigger: GGTCAGACACACTGGACCCCACCTTCCAAACCCTGG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCACCAAGGTTTCCTTTaGACTTCTGCCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSHQGFL*TSALLP
Trigger: AGGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCAGGCTCCCCCTGTTaGTCAGATACTTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLAGSPC*SDTCID
Trigger: GTCAATGCAAGTATCTGACCAACAGGGGGAGCCTGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACCCTCCTCTGTGGGTaGAAGTGCACATGCATACAC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTLLCG*KCTCIH
Trigger: GTGTATGCATGTGCACTTCCACCCACAGAGGAGGGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGTAGACCCAAAGGTATaGCAGAATCCAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSVDPKV*QNPALS
Trigger: AGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTAC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCAGCCTTGTTTCCTTaGGGGCTGAAGTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLAALFP*GLKSGI
Trigger: TATGCCAGACTTCAGCCCCCAAGGAAACAAGGCTGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAGGCTCCACAAAATCTaGGCTACAGAGATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSRLHKI*ATEMLC
Trigger: GCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp TTCCAGTCACTGCATCCACAGGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAGGAATTTGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: FQSLHPQDETAD*AEQNPKEFDEV
Trigger: GACTTCGTCAAATTCCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTCCTGTGGATGCAGTGACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp ATGCCAGGACAGTACATTTGGACGGCGACACCTTGTTaGCAGAATCCTGCATTACTTAACCCCCGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: MPGQYIWTATPC*QNPALLNPRSE
Trigger: TTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACAACTTCCACGGAGTaGAGAGAGCCATTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTTSTE*REPLLS
Trigger: AGAGAGCAATGGCTCTCTTCACTCCGTGGAAGTTGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAGAGCATGGCAGCAATaGTTCAGTGGGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPRAWQQ*FSGVGT
Trigger: AGTTCCCACCCCACTGAATCATTGCTGCCATGCTCT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGGGACAGCCAGCAAATaGTCCTTGCAGCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLGTASK*SLQLLE
Trigger: TTCCAAAAGCTGCAAGGATCATTTGCTGGCTGTCCC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGGAACACAGGCTGGTTaGCACGTTGGCAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTGTQAG*HVGNQQ
Trigger: CTGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGTTTCCTTGGGGGCTaGAGTCTGGCATATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSCFLGG*SLAYFQ
Trigger: TTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGCTGGATGGTAAAGTaGAGAAGCATCATACCCCAA +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSCWMVK*RSIIPQ
Trigger: TTGGGGTATGATGCTTCTGCACTTTACCATCCAGCA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCAGAAGCTATCCACTTTaGCATACACAAGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSRSYPL*HTQGTG
Trigger: ACCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCT...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCTCTCCTGGCACACCTaGTTGCAGGACTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMLSWHT*LQDCPG
Trigger: GCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTTGTCCTTGTTGAGGTaGTGGAAGAAAGAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESLSLLR*WKKEGS
Trigger: CGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCAGGAAACTGCCCTTaGTTAAAAGAAATGCACAGG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSAGNCP*LKEMHR
Trigger: CCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCATACACAAAATAAATaGGGTGTTTACCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEHTQNK*GVYQHS
Trigger: TGAATGCTGGTAAACACCGCATTTATTTTGTGTATG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGGGTATGAGGGAACATaGTATAAAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSGYEGT*YKTAEG
Trigger: ACCCTCAGCAGTTTTATACCATGTTCCCTCATACCC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGTCCAACAAACAACTTaGTTTCTCGAAGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALVQQTT*FLEEGT
Trigger: AGTTCCTTCTTCGAGAAACCAAGTTGTTTGTTGGAC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCACATCACTTGCCCATaGCAGAAGTCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSHITCP*QKSCFS
Trigger: TGAAAAACAGGACTTCTGCCATGGGCAAGTGATGTG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGCCAGCTCTGAGCTTTaGCAGGTCACCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLASSEL*QVTLYF
Trigger: GAAGTACAAGGTGACCTGCCAAAGCTCAGAGCTGGC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGTAGACCCAAAGGTATaGCAGAATCCAGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESVDPKV*QNPALS
Trigger: AGAAAGGGCTGGATTCTGCCATACCTTTGGGTCTAC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCAGGGAACACAGGCTaGTTGACACGTTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAGNTG*LTRWQP
Trigger: TGGTTGCCAACGTGTCAACCAGCCTGTGTTCCCTGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTTGGAGAAATGGGGTaGCCACCGTGGTCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLGEMG*PPWSAL
Trigger: TAGGGCAGACCACGGTGGCCACCCCATTTCTCCAAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGCTAGGTAAACCACCTTaGAGAAATGGGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLLGKPP*RNGVAT
Trigger: GGTGGCCACCCCATTTCTCCAAGGTGGTTTACCTAG...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGCAAAGGGACCTGCCTaGGGAATGTGTAAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESAKGPA*GMCKFN
Trigger: ATTGAACTTACACATTCCCCAGGCAGGTCCCTTTGC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCATCATACCCCAAATaGAGCCAAAAGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLASYPK*SQKSPG
Trigger: TCCTGGTGACTTTTGGCTTCATTTGGGGTATGATGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTACGAATTTCCGCCAATaGATTATGATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGTNFRQ*IMISFF
Trigger: GAAGAAGCTGATCATAATTCATTGGCGGAAATTCGT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACTTCCTCCTGATTGTTaGGGTCAACAGTCCACACAT +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLPPDC*GQQSTH
Trigger: ATGTGTGGACTGTTGACCTCAACAATCAGGAGGAAG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAAACTGTAATGAGCAGTaGCACAAACCCAGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTNCNEQ*HKPSPN
Trigger: GTTTGGACTGGGTTTGTGTCACTGCTCATTACAGTT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTCAACAGGAAGGGAATaGGCTCAGCTCTATTTCTCA +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESSTGRE*AQLYFS
Trigger: TGAGAAATAGAGCTGAGCTCATTCCCTTCCTGTTGA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTCTCAAAAATGTTCCTTaGGGAAAACCCTTGGAATGT +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGLKNVP*GKPLEC
Trigger: ACATTCCAAGGGTTTTCCTCAAGGAACATTTTTGAG...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGAAAACATTCAGTCATaGGCAGCCTCTAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLENIQS*AASRSC
Trigger: ACAGCTCCTAGAGGCTGCTCATGACTGAATGTTTTC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAACTTGGGTAGGACAATaGGCAAAATGCTTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTTWVGQ*AKCFPS
Trigger: ACTTGGGAAGCATTTTGCTCATTGTCCTACCCAAGT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTACAAGGGACTGGTTCTaGCTTTTGATTTCATTAATG +
Preference number: 4 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALTRDWF*LLISLM
Trigger: CATTAATGAAATCAAAAGGCAGAACCAGTCCCTTGT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAGCAGGAAACTGCCCTTaGTTAAAAGAAATGCACAGG +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTAGNCP*LKEMHR
Trigger: CCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGC...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGATCCTCAGTGTTCAATaGTCCTGGAAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLILSVQ*SWKSPG
Trigger: TCCTGGGCTCTTCCAGGAGCATTGAACACTGAGGAT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATTAGCTGGAGGAGTCTaGTATTGCCCTTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLAGGV*YCPSTA
Trigger: TGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATGTGGTGGATATCACTaGAGTTCAGGTGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLCGGYH*SSGAAQ
Trigger: TTGAGCAGCACCTGAACTCCAGTGATATCCACCACA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGTTGATTTCATTAATGTaGTGGATATCACTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGLISLM*WISLEF
Trigger: GAACTCCAGTGATATCCACCACATTAATGAAATCAA...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACAGCTCTCTCAGAGTTaGCTTGCCAATGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTQLSQS*LANEKV
Trigger: GACTTTTTCATTGGCAAGCCAACTCTGAGAGAGCTG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTCCTTGTTGAGGTGCTaGAAGAAAGAAGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLSLLRC*KKEGSQ
Trigger: CTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGACTTTCTTTTGCCCTaGAGCAGCTGCAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLDFLLP*SSCSDS
Trigger: ACTGTCACTGCAGCTGCTCCAGGGCAAAAGAAAGTC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACACCAAGGTTTCCTTTaGACTTCTGCCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLHQGFL*TSALLP
Trigger: AGGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGTAGCAGTGGCTAAGTaGGTTAAACTTTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLVAVAK*VKLCSA
Trigger: GGCCGAGCAAAGTTTAACCCACTTAGCCACTGCTAC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAAGTCTGAGGAGGCCTaGGAGCCAGTACACATTCAG +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMKSEEA*EPVHIQ
Trigger: CTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp AAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTaGGACGGCGACACCTTGTTTGCAGAATCCTGCATT +
Preference number: 4 (lower is better)
Translates to: KQSSALYARTVH*DGDTLFAESCI
Trigger: AATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGCATCATACCCCAAATaGAGCCAAAAGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLASYPK*SQKSPG
Trigger: TCCTGGTGACTTTTGGCTTCATTTGGGGTATGATGC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAGCTCTCCAAGGTAAATaGGGACACCAATTTTCAACC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLALQGK*GHQFST
Trigger: GGTTGAAAATTGGTGTCCTCATTTACCTTGGAGAGC...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTCCTCTACTTCCTCCTaGTTGTTGAGGTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLSSTSS*LLRSTV
Trigger: GACTGTTGACCTCAACAATCAGGAGGAAGTAGAGGA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAGCTACACCCTCAGGTaGGTAGCCAGGACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMSYTLR*VARTGH
Trigger: GTGCCCTGTCCTGGCTACTCACCTGAGGGTGTAGCT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGGGTCCAGTGTGTCTaGCCAGGCCAACCTGATGAC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMGVQCV*PGQPDD
Trigger: GTCATCAGGTTGGCCTGGTCAGACACACTGGACCCC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCTGAGGTCCAGGATCTaGTCGCGCAGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMLRSRI*SRSMEL
Trigger: CAGCTCCATGCTGCGCGAGCAGATCCTGGACCTCAG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTCTCTCCTGCACCCTaGCCAAAGCAGACAGAACAA +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLSPAP*PKQTEQ
Trigger: TTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTTCCCTGGACTTTGGTaGCATCAGAGGGGACACAAC +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTFPGLW*HQRGHN
Trigger: GTTGTGTCCCCTCTGATGGCACCAAAGTCCAGGGAA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGAGAAGGGGTCTCACTTaGATCAGCATGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLRRGLT*ISMEMS
Trigger: TGACATCTCCATGCTGATGCAAGTGAGACCCCTTCT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAATTTGATGGAAACATaGAGAACTAACCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSNLMET*RTNQSG
Trigger: CCCAGACTGGTTAGTTCTGCATGTTTCCATCAAATT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAATCTATCCAGAGTTGTaGCAAGACAGGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPIYPEL*QDRAGD
Trigger: ATCTCCTGCCCTGTCTTGGCACAACTCTGGATAGAT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATGTGGTGGATATCACTaGAGTTCAGGTGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPCGGYH*SSGAAQ
Trigger: TTGAGCAGCACCTGAACTCCAGTGATATCCACCACA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTGCACGTAAATTCATATaGCATGTATGGCTCAATCTT +
Preference number: 4 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGARKFI*HVWLNL
Trigger: AAGATTGAGCCATACATGCCATATGAATTTACGTGC...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAGTAAGGTCCAGTATGTaGCTAGCCAAAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPVRSSM*LAKGHL
Trigger: AAGGTGACCTTTGGCTAGCCACATACTGGACCTTAC...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGACGAGACTGCTGATTTaGCGGAACAGAATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLTRLLI*RNRIQR
Trigger: CCTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp TTTTCTCCAGGAGGCGGCCAGGGAATAACCTTTAATTaGATGGAAACATGCAGAACTAACCAGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FSPGGGQGITFN*METCRTNQSGS
Trigger: ACTCCCAGACTGGTTAGTTCTGCATGTTTCCATCAAATTAAAGGTTATTCCCTGGCCGCCTCCTGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTGCTTTTGGGTGGGTTaGACTTGGGATTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLCFWVG*TWDSEK
Trigger: CTTTTCTGAATCCCAAGTTCAACCCACCCAAAAGCA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAAGAAGGCTCGCAGATaGGCTGGCTCTCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMKKARR*AGSPGT
Trigger: TGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGTCCTTGGCCAGCTCTaGGCTTTGGCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMVLGQL*ALAGHL
Trigger: AAGGTGACCTGCCAAAGCTCAGAGCTGGCCAAGGAC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTGCTGCCATCTGTTTTaGGCTGCCAGGTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMCCHLF*AARSPW
Trigger: CCATGGGGACCTGGCAGCTCAAAACAGATGGCAGCA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGGCAGGGCGGGTTGTaGCTTGGAAAAGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMGQGGL*LGKEGE
Trigger: TTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGACTTGGGTAGGACAATaGGCAAAATGCTTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLTWVGQ*AKCFPS
Trigger: ACTTGGGAAGCATTTTGCTCATTGTCCTACCCAAGT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAACTCCAACTTGCCAATaGGCTGCAAAATGTTATCTA +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTTPTCQ*AAKCYL
Trigger: TAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAAGGTTCTGCTTTTCTaGCAGGGACTTGATTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPKVLLF*QGLDCL
Trigger: CAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAAAAGCACATCCATTTaGGATAGCTTCCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMKSTSI*DSFQGS
Trigger: GCTCCCCTGGAAGCTATCGCAAATGGATGTGCTTTT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAGAAGGGGTCTCACTTaGATCAGCATGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMRRGLT*ISMEMS
Trigger: TGACATCTCCATGCTGATGCAAGTGAGACCCCTTCT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATGTTGGTCAGATACTTaGATTGACATCCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTCWSDT*IDILSV
Trigger: AACACTGAGGATGTCAATGCAAGTATCTGACCAACA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGTTAGCTGGAGGAGTCTaGTATTGCCCTTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLAGGV*YCPSTA
Trigger: TGCTGTTGAAGGGCAATAGCAGACTCCTCCAGCTAA...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACCTGAACTCCTTGGATaGACCCATTCACATGATTCT +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPPELLG*THSHDS
Trigger: AGAATCATGTGAATGGGTGCATCCAAGGAGTTCAGG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTCTGCTCGCGCAGCATaGAGCTGCTTTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMSARAA*SCFQAE
Trigger: CTCAGCCTGAAAGCAGCTCCATGCTGCGCGAGCAGA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGAATATTCTTTGTGCTaGAGCCATAAACAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: PFPHILKATSHYALPISSEYSLC*SHKQLH
Trigger: ATGCAACTGTTTATGGCTCCAGCACAAAGAATATTC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGCACGTAAATTCATATaGCATGTATGGCTCAATCTT +
Preference number: 4 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSARKFI*HVWLNL
Trigger: AAGATTGAGCCATACATGCCATATGAATTTACGTGC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGCACCAGGATGTCCTTaGCCAGCTCTGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMAPGCP*PALSFG
Trigger: GCCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTTGCAGAGAGCCACCTaGCCCTTGATGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMLQRAT*PLMKSR
Trigger: CCGGGACTTCATCAAGGGCCAGGTGGCTCTCTGCAA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACTCCTGTCCAAATCTTaGCTCAAAGATAATCCTCTC +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLLLSKS*LKDNPL
Trigger: GAGAGGATTATCTTTGAGCCAAGATTTGGACAGGAG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTCCATGCAGGGCAGTTaGAAGCCCCCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMSMQGS*KPPPQF
Trigger: AAACTGGGGAGGGGGCTTCCAACTGCCCTGCATGGA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGCTGGTTGACACGTTaGCAACCAGCAGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMGWLTR*QPAVPR
Trigger: CCTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCGTCACCATCTCCTTTaGCATCAACTATTATGCTAT +
Preference number: 4 (lower is better)
Translates to: GTHPQLHETPSFLNEHESRHHLL*HQLLCY
Trigger: ATAGCATAATAGTTGATGCCAAAGGAGATGGTGACG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGCCAGGCTCCTGGCCTaGCATACGCTCTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMARLLA*HTLLFC
Trigger: ACAAAACAAGAGCGTATGTCAGGCCAGGAGCCTGGC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTTTCCCTCACATTCTaGAAGCTACCAGCCATTACG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLSLTF*KLPAIT
Trigger: CGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGTCAGATACTTGCATTaGCATCCTCAGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLVRYLH*HPQCSM
Trigger: CATTGAACACTGAGGATGTCAATGCAAGTATCTGAC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACTCCAACTTGCCAATaGGCTGCAAAATGTTATCTA +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTPTCQ*AAKCYL
Trigger: TAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAAGGTTCTGCTTTTCTaGCAGGGACTTGATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMKVLLF*QGLDCL
Trigger: CAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCTCTTTTCAAGGTTCTaGTTTTCTGCCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLFSRF*FSARDL
Trigger: CAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAGAG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTATGGGAATATTCTTTGTaGTGGAGCCATAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLWEYSL*WSHKQL
Trigger: CAACTGTTTATGGCTCCAGCACAAAGAATATTCCCA...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCCTGAACTCCTTGGATaGACCCATTCACATGATTCT +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMPELLG*THSHDS
Trigger: AGAATCATGTGAATGGGTGCATCCAAGGAGTTCAGG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGAAGCAGTGCTCTCTATaGCAGGACAGTACATTTGGA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMKQCSL*QDSTFG
Trigger: TCCAAATGTACTGTCCTGGCATAGAGAGCACTGCTT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGTAAGGTCCAGTATGTaGCTAGCCAAAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTVRSSM*LAKGHL
Trigger: AAGGTGACCTTTGGCTAGCCACATACTGGACCTTAC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTACGTCACCATCTCCTTTaGCATCAACTATTATGCTAT +
Preference number: 4 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLRHHLL*HQLLCY
Trigger: ATAGCATAATAGTTGATGCCAAAGGAGATGGTGACG...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp GCCTCTATTATTGCATTCAAAGGAATACTGTTAACTTaGACTCAAGGGGTGCAGTCTGCCAGAGAACCCATT +
Preference number: 4 (lower is better)
Translates to: ASIIAFKGILLT*TQGVQSAREPI
Trigger: AATGGGTTCTCTGGCAGACTGCACCCCTTGAGTCAAAGTTAACAGTATTCCTTTGAATGCAATAATAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAACGAATTTCCGCCAATaGATTATGATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPTNFRQ*IMISFF
Trigger: GAAGAAGCTGATCATAATTCATTGGCGGAAATTCGT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCCCACAGTTGCTCCTTaGGAAACAGAAATGATGTTG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTPTVAP*ETEMML
Trigger: CAACATCATTTCTGTTTCTCAAGGAGCAACTGTGGG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCAACAGGAAGGGAATaGGCTCAGCTCTATTTCTCA +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSTGRE*AQLYFS
Trigger: TGAGAAATAGAGCTGAGCTCATTCCCTTCCTGTTGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGATTCCTGTTTTCTTCTaGCAGTGCCTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMIPVFF*QCLDVP
Trigger: AGGTACATCAAGGCACTGGCAGAAGAAAACAGGAAT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCAAGGGGTGCAGTCTaGCAGAGAACCCATTTTAAT +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSRGAV*QRTHFN
Trigger: ATTAAAATGGGTTCTCTGGCAGACTGCACCCCTTGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTAAGCAGTGCTCTCTATaGCAGGACAGTACATTTGGA +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTKQCSL*QDSTFG
Trigger: TCCAAATGTACTGTCCTGGCATAGAGAGCACTGCTT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTTTGCTGCTTTTGGGTaGGTTGAACTTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTFAAFG*VELGIQ
Trigger: CTGAATCCCAAGTTCAACCCACCCAAAAGCAGCAAA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGGCAGCAATGATTCAGTaGGGTGGGAACTTATACAAA +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMAAMIQ*GGNLYK
Trigger: TTTGTATAAGTTCCCACCCCACTGAATCATTGCTGC...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTAATGCCCTAAACAACTaGAGTGTGGGCTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTNALNN*SVGLFA
Trigger: AGCAAACAAGCCCACACTCCAGTTGTTTAGGGCATT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
3UTR CAA 72 bp AGTGAATCACACAAAATGGCTGTAACCAGGATCTGTTaGAAGACACAGATGCAAACGGCCATTAGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SESHKMAVTRIC*KTQMQTAISLK
Trigger: CTTTAAGCTAATGGCCGTTTGCATCTGTGTCTTCAAACAGATCCTGGTTACAGCCATTTTGTGTGATTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGATTAATTTTCTCAAGTaGAACCAAGCTGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PCLQNPALLNPRSESHKMINFLK*NQAGNS
Trigger: GCTGTTCCCAGCTTGGTTGCACTTGAGAAAATTAAT...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAACTGAAAGCTGTCTCTaGAATCTTAAATCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPTESCL*NLKSRF
Trigger: GAATCTGGATTTAAGATTGCAGAGACAGCTTTCAGT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGACAAGGGACTGGTTCTaGCTTTTGATTTCATTAATG +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLTRDWF*LLISLM
Trigger: CATTAATGAAATCAAAAGGCAGAACCAGTCCCTTGT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGAGTTCATAAATTCTTaGAGCCTTGTTTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTEFINS*SLVSLG
Trigger: CCCCAAGGAAACAAGGCTGCAAGAATTTATGAACTC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGATAGACACAAATTCATaGTGTAGGTTGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LYNSGKQSSALYARTVHLIDTNS*CRLSVR
Trigger: TCTCACACTCAACCTACACCATGAATTTGTGTCTAT...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGACTTTCTTTTGCCCTaGAGCAGCTGCAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMDFLLP*SSCSDS
Trigger: ACTGTCACTGCAGCTGCTCCAGGGCAAAAGAAAGTC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTTGAGGAAAACCCTTaGAATGTTCTGAAAGACGTC +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLEENP*NVLKDV
Trigger: GACGTCTTTCAGAACATTCCAAGGGTTTTCCTCAAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAGCAGGAGGTCACCTTaGAACACACAGTGCTTATTC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMSRRSP*NTQCLF
Trigger: GAATAAGCACTGTGTGTTTCAAGGTGACCTCCTGCT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAAGACGTCAAGGTTGTaGCAGCAACTACAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMKTSRL*QQLQWK
Trigger: CTTCCACTGTAGTTGCTGTCACAACCTTGACGTCTT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTGGGAATATTCTTTGTaGTGGAGCCATAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTWEYSL*WSHKQL
Trigger: CAACTGTTTATGGCTCCAGCACAAAGAATATTCCCA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAGGGACTTGATTGCTTaGATCCATGCGTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMRDLIA*IHASAI
Trigger: AATGGCTGACGCATGGATCCAAGCAATCAAGTCCCT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGTCCAACAAACAACTTaGTTTCTCGAAGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTVQQTT*FLEEGT
Trigger: AGTTCCTTCTTCGAGAAACCAAGTTGTTTGTTGGAC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTGTCTTTCATCCACTTaGTCTTTCCCTCACAGTGAG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMCLSST*SFPHSE
Trigger: CTCACTGTGAGGGAAAGATCAAGTGGATGAAAGACA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTGTTTCCTTGGGGGCTaGAGTCTGGCATATTTTCAA +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMCFLGG*SLAYFQ
Trigger: TTGAAAATATGCCAGACTTCAGCCCCCAAGGAAACA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCCAGCAAATGATCCTTaGAGCTTTTGGAACACAAGG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMPANDP*SFWNTR
Trigger: CCTTGTGTTCCAAAAGCTGCAAGGATCATTTGCTGG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCGGCGACACCTTGTTTaGAGAATCCTGCATTACTTA +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMRRHLV*RILHYL
Trigger: TAAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR TCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGTCAGATACTTGCATTaGCATCCTCAGTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMVRYLH*HPQCSM
Trigger: CATTGAACACTGAGGATGTCAATGCAAGTATCTGAC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGGTTTTTCACGTAACTaGGAATATTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMGFSRN*EYSLCW
Trigger: CCAGCACAAAGAATATTCCCAGTTACGTGAAAAACC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR GCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGACTGAAAGCTGTCTCTaGAATCTTAAATCCAGATTC +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMTESCL*NLKSRF
Trigger: GAATCTGGATTTAAGATTGCAGAGACAGCTTTCAGT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGATAGACACAAATTCATaGTGTAGGTTGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMIDTNS*CRLSVR
Trigger: TCTCACACTCAACCTACACCATGAATTTGTGTCTAT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CCA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGGAATATTCTTTGTGCTaGAGCCATAAACAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: MELLSAINRFRILSRSAMEYSLC*SHKQLH
Trigger: ATGCAACTGTTTATGGCTCCAGCACAAAGAATATTC...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp CGGCGCGTCCACACTCAGCCCCGAGACGCAGCAGAGGCGCTCCTGTaGGAGCTCAGTCGACCAGGGCGGGAGTCCGTCCTCAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: RRVHTQPRDAAEALL*ELSRPGRESVLNFW
Trigger: CCAGAAATTGAGGACGGACTCCCGCCCTGGTCGACTGAGCTCCCACAGGAGCGCCTCTGCTGCGTCTCGGGGCTGAGTGTGGACGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468758.1
ENST00000481801.5
CDS GCA 90 bp GGCTCGCAGATGAGCTGGCTCTCCTGGCACACCTGCTTGCAGGACTaGCCGGGCTCAGCAAGCTTGACCTGTAGGGCGCTGAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GSQMSWLSWHTCLQD*PGSASLTCRALRGG
Trigger: GCCACCCCTCAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGTCCTGGCACACCTGCTaGCAGGACTGCCCGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLSWHTC*QDCPGS
Trigger: TGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGA...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGGGCACCAGGATGTCCTaGGCCAGCTCTGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGGTRMS*ASSELW
Trigger: CCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGCC...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGAAGGTAGGGAGGCCTaGAACTTAGGGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLEGREA*NLGTAS
Trigger: GCTGGCTGTCCCTAAGTTCAAGGCCTCCCTACCTTC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTGCTGGCAGGGTGGGGTaGGTTTTCTCCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILAGRVG*VFSRRR
Trigger: CCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGC...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGAGGCTGGTTGACACGTaGGCAACCAGCAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGRLVDT*ATSSPK
Trigger: CTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCCT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp TTGAGGTGCTGGAAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCCTaGCACACCTGCTTGCAGGACTGCCCGGGCTCAGCAAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: LRCWKKEGSQMSWLS*HTCLQDCPGSASLT
Trigger: GGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGACCAGATTCCCACCTTaGCGAGCTACACCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGTRFPP*RATPSG
Trigger: ACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGT...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCGCTCCCTCTCAGCTTaGGCAGATGTGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVRSLSA*ADVKLL
Trigger: GAGCAGCTTCACATCTGCCAAAGCTGAGAGGGAGCG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp TTGTCCTTGTTGAGGTGCTGGAAGAAAGAAGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGCTTGCAGGACTGCCCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LSLLRCWKKEGSQMS*LSWHTCLQDCPGSA
Trigger: TGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTACCAGCCATTACGCCTaGCCCATCAGTTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILTSHYA*PISSAQ
Trigger: CTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp TGCCTGGGGTGGGCGCCTGCACAGCTGAAGAGCAGGAGGTCACCTTaGAACACACAGTGCTTATTCTTAGGGTCAAAGGAGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: CLGWAPAQLKSRRSP*NTQCLFLGSKEGTR
Trigger: CCTGGTGCCCTCCTTTGACCCTAAGAATAAGCACTGTGTGTTTCAAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCGCCCACCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGGCACCAGGATGTCCTaGGCCAGCTCTGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGGTRMS*ASSELW
Trigger: CCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGCC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTGTCTGGCCCGGGCAGGGCGGGTTGTGACTTGGAAAAGAAGGGGAAGGTAGGGTCACCAAGGTTTCCTTaGGACTTCTGCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSGPGRAGCDLEKKGKVGSPRFP*DFCPSS
Trigger: GGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTGA...CCCTACCTTCCCCTTCTTTTCCAAGTCACAACCCGCCCTGCCCGGGCCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTGGAGGAGTCTGCTATaGCCCTTCAACAGCATCCGG +
Preference number: 5 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTWRSLL*PFNSIR
Trigger: CCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTAGGGCCCTGAACTCCTaGGATGCACCCATTCACATG +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILRALNS*DAPIHM
Trigger: CATGTGAATGGGTGCATCCAAGGAGTTCAGGGCCCT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLDETAD*AEQNPK
Trigger: CTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTC...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGGAATACTGTTAACTTaGACTCAAGGGGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLGILLT*TQGVQS
Trigger: AGACTGCACCCCTTGAGTCAAAGTTAACAGTATTCC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCTGGCAGGGTGGGGTaGGTTTTCTCCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSAGRVG*VFSRRR
Trigger: CCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTCTGCCCAGCGGAGGCTCCACTGGGCCGCCCTCTGTTAGCAGGAAGGGTGCTTGTAACCAGGATCTGTTaGAAGACACAGATGCAAACG +
Preference number: 5 (lower is better)
Translates to: FCPAEAPLGRPLLAGRVLVTRIC*KTQMQT
Trigger: CGTTTGCATCTGTGTCTTCAAACAGATCCTGGTTAC...AAGCACCCTTCCTGCTAACAGAGGGCGGCCCAGTGGAGCCTCCGCTGGGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTGCCAGGACAGTACATTaGGACGGCGACACCTTGTTT +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILARTVH*DGDTLF
Trigger: AAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGC...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCTTCCATTCTGCTCCTaGTTGGGCAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SRGVRVALRECLKAPQNLLPFCS*LGSSSS
Trigger: GCTGCTGCTGCTGCCCAACAAGGAGCAGAATGGAAG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409645.5
CDS TCA 90 bp CTGAGGTCCAGGATCTGCTCGCGCAGCATGGAGCTGCTTTCAGGCTaGGTTCGCTGCTGGATGGTAAAGTGCAGAAGCATCATACCCCAA +
Preference number: 5 (lower is better)
Translates to: LRSRICSRSMELLSG*VRCWMVKCRSIIPQ
Trigger: TTGGGGTATGATGCTTCTGCACTTTACCATCCAGCAGCGAACTCAGCCTGAAAGCAGCTCCATGCTGCGCGAGCAGATCCTGGACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
CDS-3UTR CAA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATT +
Preference number: 5 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLSCVSW*PFLTSI
Trigger: AATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGA...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCAATTCATGGTGTAGGTaGAGTGTGAGAGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVNSWCR*SVRVCW
Trigger: CCAGCAGACTCTCACACTCAACCTACACCATGAATT...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTGAGAGGCGTGTAGACCTCCAGCACCACAGATCCTTTGAGCACCACCCCGTCCCATTGACAACAAGATaGTCCACCTTCGACTCCAAC +
Preference number: 5 (lower is better)
Translates to: PERRVDLQHHRSFEHHPVPLTTR*STFDSN
Trigger: GTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGG...GACGGGGTGGTGCTCAAAGGATCTGTGGTGCTGGAGGTCTACACGCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCTTTTCTGCCAGGGACTaGATTGCTTGGATCCATGCG +
Preference number: 5 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLFSARD*IAWIHA
Trigger: CGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAA...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTTTTTCTGCCAGGGACTaGATTGCTTGGATCCATGCG +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILFSARD*IAWIHA
Trigger: CGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAA...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCTGCTTTTGGGTGGGTaGAACTTGGGATTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLLLLGG*NLGFRK
Trigger: TTTTCTGAATCCCAAGTTCAACCCACCCAAAAGCAG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCCGGGCTCAGCAAGCTaGACCTGTAGGGCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESPGSAS*TCRALR
Trigger: CCTCAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCAGACTGGAGATACAATaGAGACGCACTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLRLEIQ*RRTEQG
Trigger: TCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTCT...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGGGGAACACAGGCTGGTaGACACGTTGGCAACCAGCA +
Preference number: 5 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMGNTGW*TRWQPA
Trigger: TGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCCC...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 90 bp TGGCAGGTCACCTTGTACTTCAGCATGTCCTTGTCCTTGTTGAGGTaGTGGAAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: WQVTLYFSMSLSLLR*WKKEGSQMSWLSWH
Trigger: GTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACATGCTGAAGTACAAGGTGACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp CAGGTCACCTTGTACTTCAGCATGTCCTTGTCCTTGTTGAGGTGCTaGAAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCCTGGCACACC +
Preference number: 5 (lower is better)
Translates to: QVTLYFSMSLSLLRC*KKEGSQMSWLSWHT
Trigger: GGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACATGCTGAAGTACAAGGTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAATTCATGGTGTAGGTaGAGTGTGAGAGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTNSWCR*SVRVCW
Trigger: CCAGCAGACTCTCACACTCAACCTACACCATGAATT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGCAGGGACTTGATTGCTaGGATCCATGCGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SRGVRVALRECLKAPQNLQGLDC*DPCVSH
Trigger: ATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTG...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTTGCTATAGGCAGTCTTaGCAGAGAGCCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGCYRQS*QRATWP
Trigger: GGGCCAGGTGGCTCTCTGCAAAGACTGCCTATAGCA...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGGCGCCCCTGTGATGATGCTCAGGGCAGAGGCCTCCCCATGGTACTCTACCTGCAGAAACTTACAAACTaGTACAGAGCATGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: RRPCDDAQGRGLPMVLYLQKLTN*YRAWQQ
Trigger: TTGCTGCCATGCTCTGTACAAGTTTGTAAGTTTCTG...CAGGTAGAGTACCATGGGGAGGCCTCTGCCCTGAGCATCATCACAGGGGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTACCAGCCATTACGCCTaGCCCATCAGTTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGTSHYA*PISSAQ
Trigger: CTGGGCAGAACTGATGGGCAAGGCGTAATGGCTGGT...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGAACTGGAGTGTGGGCTaGTTTGCTCCAAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGNWSVG*FAPRAA
Trigger: AGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTGGAATACTGTTAACTTaGACTCAAGGGGTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLGILLT*TQGVQS
Trigger: AGACTGCACCCCTTGAGTCAAAGTTAACAGTATTCC...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CACAACACAAGCCCACCTGTCAGGAGCCCAGCTCCGGTCGCGCCACAAATTCTTACGGCGACACCTTGTTaGCAGAATCCTGCATTACTT +
Preference number: 5 (lower is better)
Translates to: HNTSPPVRSPAPVAPQILTATPC*QNPALL
Trigger: AAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGT...AAGAATTTGTGGCGCGACCGGAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGCCAGGACAGTACATTaGGACGGCGACACCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SRGVRVALRECLKAPQNLARTVH*DGDTLF
Trigger: AAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp TCACCAGGAAAAAGCCCAGCTTCTGAGAGGACAACTTCCACGGAGTaGAGAGAGCCATTGCTCTCTGGCAACTTCACCTGTCCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SPGKSPASERTTSTE*REPLLSGNFTCPWL
Trigger: GAGCCAAGGACAGGTGAAGTTGCCAGAGAGCAATGGCTCTCTTCACTCCGTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTTTCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
ENST00000488365.1
CDS-3UTR CAA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTAGTCCAACAAACAACTaGGTTTCTCGAAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLSPTNN*VSRRRN
Trigger: GTTCCTTCTTCGAGAAACCAAGTTGTTTGTTGGACT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCACCGGGCTCAGCAAGCTaGACCTGTAGGGCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPPGSAS*TCRALR
Trigger: CCTCAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGG...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTGCTATAGGCAGTCTTaGCAGAGAGCCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSCYRQS*QRATWP
Trigger: GGGCCAGGTGGCTCTCTGCAAAGACTGCCTATAGCA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCGCTCTTGTTTTGTTTaGGTGAAGACTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: GRQPLTLGRRGLTCISMERSCFV*VKTPLG
Trigger: ACCCAGTGGAGTCTTCACCAAAACAAAACAAGAGCG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTCTGCTGCCATCTGTTTaGAGCTGCCAGGTCCCCATG +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSLLPSV*SCQVPM
Trigger: CATGGGGACCTGGCAGCTCAAAACAGATGGCAGCAG...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGAGTGTGGGCTTGTTaGCTCCAAGAGCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGVWAC*LQEQLP
Trigger: GGGCAGCTGCTCTTGGAGCAAACAAGCCCACACTCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTTCCATGCAGGGCAGTaGGAAGCCCCCTCCCCAGTT +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESFHAGQ*EAPSPV
Trigger: AACTGGGGAGGGGGCTTCCAACTGCCCTGCATGGAA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGGAATCCAGCCCTTTCTaGAGGTTCTCAAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQESSPF*RFSRLH
Trigger: GTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTC...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGGGAACACAGGCTGGTaGACACGTTGGCAACCAGCA +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSGNTGW*TRWQPA
Trigger: TGCTGGTTGCCAACGTGTCAACCAGCCTGTGTTCCC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGACGAGACTGCTGATTaGGCGGAACAGAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGDETAD*AEQNPK
Trigger: CTTTGGATTCTGTTCCGCCAAATCAGCAGTCTCGTC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCAGCTGGCAGGGTGGGGTTGGTTTTCTCCAGGAGGCGGCCAGGGAATAACCTTACGTCACCATCTCCTTaGGCATCAACTATTATGCTA +
Preference number: 5 (lower is better)
Translates to: PAGRVGLVFSRRRPGNNLTSPSP*ASTIML
Trigger: TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGT...AAGGTTATTCCCTGGCCGCCTCCTGGAGAAAACCAACCCCACCCTGCCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp ATTCTTAGGGTCAAAGGAGGGCACCAGGATGTCCTTGGCCAGCTCTaGGCTTTGGCAGGTCACCTTGTACTTCAGCATGTCCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ILRVKGGHQDVLGQL*ALAGHLVLQHVLVL
Trigger: AAGGACAAGGACATGCTGAAGTACAAGGTGACCTGCCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGCCCTCCTTTGACCCTAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 90 bp CATGACTCCAGCGTATGGCCCATCCACCACATTCCTGTTTTCTTCTaGCAGTGCCTTGATGTACCTTTTGCTGAGGTCCAGGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: HDSSVWPIHHIPVFF*QCLDVPFAEVQDLL
Trigger: GAGCAGATCCTGGACCTCAGCAAAAGGTACATCAAGGCACTGGCAGAAGAAAACAGGAATGTGGTGGATGGGCCATACGCTGGAGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
CDS-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTCTTCTGCCAGTGCCTaGATGTACCTTTTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMSSASA*MYLLLR
Trigger: CCTCAGCAAAAGGTACATCAAGGCACTGGCAGAAGA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTCAGAAGCTATCCACTTaGCCATACACAAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALQKLST*PYTRDW
Trigger: CCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCTG...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTAGTCCAACAAACAACTaGGTTTCTCGAAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSPTNN*VSRRRN
Trigger: GTTCCTTCTTCGAGAAACCAAGTTGTTTGTTGGACT...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGCTGCTTTTGGGTGGGTaGAACTTGGGATTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GRQPLTLGRRGLTCISMELLLGG*NLGFRK
Trigger: TTTTCTGAATCCCAAGTTCAACCCACCCAAAAGCAG...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGGGCCAAGTCTGAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTTCCCACAGTTGCTCCTaGAGAAACAGAAATGATGTT +
Preference number: 5 (lower is better)
Translates to: WAKSEEAWEPVHIQGSLTSHSCS*RNRNDV
Trigger: AACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGA...AGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTCAGACTTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGACAGTCTTCCCACAGTaGCTCCTTGAGAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: GRQPLTLGRRGLTCISMETVFPQ*LLEKQK
Trigger: TTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGT...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTTGGTGCCATCAGAGGGGACACAACACAAGCCCACCTGTCAGGAGCCCAGCTCGGTCAGATACTTGCATaGACATCCTCAGTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: FGAIRGDTTQAHLSGAQLGQILA*TSSVFN
Trigger: ATTGAACACTGAGGATGTCAATGCAAGTATCTGACC...GAGCTGGGCTCCTGACAGGTGGGCTTGTGTTGTGTCCCCTCTGATGGCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGGCTACAGAGATGCTTaGCAGATGGGAAATTCCAGT +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGGYRDA*QMGNSS
Trigger: ACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCGCTCCCTCTCAGCTTaGGCAGATGTGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESRSLSA*ADVKLL
Trigger: GAGCAGCTTCACATCTGCCAAAGCTGAGAGGGAGCG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGACGGCGACACCTTGTTaGCAGAATCCTGCATTACTT +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGTATPC*QNPALL
Trigger: AAGTAATGCAGGATTCTGCAAACAAGGTGTCGCCGT...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp GGCTCCTGTGTCAGCTGGTTGCCTTTCCTCACTTCCATTCTGCTGTaGAGGAGGAGAAGAATTAGCCAAGTGGTCATGGCACAATACAGC +
Preference number: 5 (lower is better)
Translates to: GSCVSWLPFLTSILL*RRRRISQVVMAQYS
Trigger: GCTGTATTGTGCCATGACCACTTGGCTAATTCTTCTCCTCCTTCACAGCAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS TCA 90 bp AGAGCAGGTGGATCCATCCACTCCATAGTCTGCGTAGCAGGGATCTaGACGCCACATGTCTTTCATCCACTTGATCTTTCCCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: RAGGSIHSIVCVAGI*TPHVFHPLDLSLTV
Trigger: CACTGTGAGGGAAAGATCAAGTGGATGAAAGACATGTGGCGTTCAGATCCCTGCTACGCAGACTATGGAGTGGATGGATCCACCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp TCTTCCGCTTTCTCTTTTCAAGGTTCTGCTTTTCTGCCAGGGACTTaGTTGCTTGGATCCATGCGTCAGCCATTCGCCGGATCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: SSAFSFQGSAFLPGT*LLGSMRQPFAGSVV
Trigger: GACTACGGATCCGGCGAATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAGAGAAAGCGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGCCTTGATGTACCTTTaGCTGAGGTCCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSALMYL*LRSRIC
Trigger: GCAGATCCTGGACCTCAGCAAAAGGTACATCAAGGC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTTTGTTCCGGTGCCATaGACAACAAGATTGTCCACC +
Preference number: 5 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMFVPVP*TTRLST
Trigger: GGTGGACAATCTTGTTGTCAATGGCACCGGAACAAA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTTTTCCCCAAGGGGTCTaGTGGCCTTTCGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESFPQGV*WPFDWA
Trigger: TGCCCAATCGAAAGGCCACAAGACCCCTTGGGGAAA...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTCCTGGCACACCTGCTaGCAGGACTGCCCGGGCTCA +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTSWHTC*QDCPGS
Trigger: TGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TGCCCTGGAGCAGCTGCAGTGACAGTCTTCCCACAGTTGCTCCTTGAGAAACAGTGCAGGAAACTGCCCTaGCTTAAAAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: CPGAAAVTVFPQLLLEKQCRKLP*LKRNAQ
Trigger: CTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCA...CTGTTTCTCAAGGAGCAACTGTGGGAAGACTGTCACTGCAGCTGCTCCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGACGCCAACCGCTCACATTAGGCAGAAGGGGTCTCACTTGCATCAGCATGGAGGGTCAGATACTTGCATaGACATCCTCAGTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: GRQPLTLGRRGLTCISMEGQILA*TSSVFN
Trigger: ATTGAACACTGAGGATGTCAATGCAAGTATCTGACC...CTCCATGCTGATGCAAGTGAGACCCCTTCTGCCTAATGTGAGCGGTTGGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTAACTGGAGTGTGGGCTaGTTTGCTCCAAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSNWSVG*FAPRAA
Trigger: AGCTGCTCTTGGAGCAAACAAGCCCACACTCCAGTT...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGCAATCTATCCAGAGTaGTGCCAAGACAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSAIYPE*CQDRAG
Trigger: TCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGCAATCTATCCAGAGTaGTGCCAAGACAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSAIYPE*CQDRAG
Trigger: TCCTGCCCTGTCTTGGCACAACTCTGGATAGATTGC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 90 bp ACTCTGGCTCCTGTGTCAGCTGGTTGCCTTTCCTCACTTCCATTCTaGTGTGAAGGAGGAGAAGAATTAGCCAAGTGGTCATGGCACAAT +
Preference number: 5 (lower is better)
Translates to: TLAPVSAGCLSSLPF*CEGGEELAKWSWHN
Trigger: ATTGTGCCATGACCACTTGGCTAATTCTTCTCCTCCTTCACAGCAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS GCA 90 bp GATCTTGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGTTGGTCTaGCTCTTACTGTTTTCCCATTGCCTCCTTGTTGGGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DLEAISFQSPGSLLV*LLLFSHCLLVGQQQ
Trigger: CTGCTGCTGCCCAACAAGGAGGCAATGGGAAAACAGTAAGAGGCAGACCAACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468758.1
CDS CCA 90 bp TTTCTCTTTTCAAGGTTCTGCTTTTCTGCCAGGGACTTGATTGCTTaGATCCATGCGTCAGCCATTCGCCGGATCCGTAGTCTCATCCAC +
Preference number: 5 (lower is better)
Translates to: FLFSRFCFSARDLIA*IHASAIRRIRSLIH
Trigger: GTGGATGAGACTACGGATCCGGCGAATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp AGCAGGATCTTGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGTTaGTCTGCCTCTTACTGTTTTCCCATTGCCTCCTTGTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRILKQLAFRALDHC*SASYCFPIASLLGS
Trigger: GCTGCCCAACAAGGAGGCAATGGGAAAACAGTAAGAGGCAGACCAACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAAGATCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468758.1
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATT +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSSCVSW*PFLTSI
Trigger: AATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGA...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCTTCGTAGGGATTTTTaGCTCTCCAAGGTAAATGAG +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGLRRDF*LSKVNE
Trigger: CTCATTTACCTTGGAGAGCAAAAAATCCCTACGAAG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACAGGGACTTGATTGCTaGGATCCATGCGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTQGLDC*DPCVSH
Trigger: ATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGTTCTTCATGATTTCCTaGAGCTCAGCCAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMFFMIS*SSASEA
Trigger: AGCTTCACTGGCTGAGCTCAAGGAAATCATGAAGAA...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGCTTGTGGCCTTTCGATaGGGCATAATTTGCATGATT +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGLVAFR*GIICMI
Trigger: AATCATGCAAATTATGCCCAATCGAAAGGCCACAAG...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAGGAGGCCTGGGAGCCAGTACACATTCAGGGGTCACTGACTCTTCAGATAATGACAGTCTTCCCACAGTaGCTCCTTGAGAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: EEAWEPVHIQGSLTLQIMTVFPQ*LLEKQK
Trigger: TTTCTGTTTCTCAAGGAGCAACTGTGGGAAGACTGT...CATTATCTGAAGAGTCAGTGACCCCTGAATGTGTACTGGCTCCCAGGCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAACTACAGTGGAAGGGACGTCACCATCTCCTTTGGCATCAACTATTATGCTAACCAGATTCCCACCTTaGCGAGCTACACCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: ATTVEGTSPSPLASTIMLTRFPP*RATPSG
Trigger: ACCTGAGGGTGTAGCTCGCAAAGGTGGGAATCTGGT...TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGTCCCTTCCACTGTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGCCGTGGGGTCAGGGTGGCATTGAGGGAGTGTCTTAAGGCTCCACAAAATCTGGTCTCCCACTTTTTGTaGAAGCGAACAAGAATCACA +
Preference number: 5 (lower is better)
Translates to: SRGVRVALRECLKAPQNLVSHFL*KRTRIT
Trigger: TGTGATTCTTGTTCGCTTCAACAAAAAGTGGGAGAC...CAGATTTTGTGGAGCCTTAAGACACTCCCTCAATGCCACCCTGACCCCACGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGGAGTTCATAAATTCTaGCAGCCTTGTTTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALGVHKF*QPCFLG
Trigger: CCCAAGGAAACAAGGCTGCAAGAATTTATGAACTCC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GCAGAATCCAGCCCTTTCTTGAGGTTCTCAAGGCTTCACACCCTCCTCTGTGGGGCTCAAAAATGTTCCTaGAGGAAAACCCTTGGAATG +
Preference number: 5 (lower is better)
Translates to: AESSPFLRFSRLHTLLCGAQKCS*RKTLGM
Trigger: CATTCCAAGGGTTTTCCTCAAGGAACATTTTTGAGC...CCCACAGAGGAGGGTGTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp AAGATAGACACAAATTCATGGTGTAGGTTGAGTGTGAGAGTCTGCTaGTCTCACTCTGGCTCCTGTGTCAGCTGGTTGCCTTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: KIDTNSWCRLSVRVC*SHSGSCVSWLPFLT
Trigger: AGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACTCAACCTACACCATGAATTTGTGTCTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
ENST00000488365.1
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTACCTTCGACTCCAACTaGCCAATGCGCTGCAAAATG +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESTFDSN*PMRCKM
Trigger: CATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGT...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACAACCTTCGACTCCAACTaGCCAATGCGCTGCAAAATG +
Preference number: 5 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTTFDSN*PMRCKM
Trigger: CATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGT...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCCATTGACAACAAGATaGTCCACCTTCGACTCCAAC +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSPLTTR*STFDSN
Trigger: GTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTTTCCCCAAGGGGTCTaGTGGCCTTTCGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: LYNSGKQSSALYARTVHLFPQGV*WPFDWA
Trigger: TGCCCAATCGAAAGGCCACAAGACCCCTTGGGGAAA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGACTGGTTCTGCCTTTaGATTTCATTAATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALDWFCL*ISLMWW
Trigger: CCACCACATTAATGAAATCAAAAGGCAGAACCAGTC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTCAGAAGCTATCCACTTaGCCATACACAAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESQKLST*PYTRDW
Trigger: CCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCTG...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTTCTCTCAGAGTTGGCTaGCCAATGAAAAAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGSLRVG*PMKKSV
Trigger: CACAGACTTTTTCATTGGCAAGCCAACTCTGAGAGA...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACACTTTGGCAGGTCACCTaGTACTTCAGCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLWQVT*YFSMSL
Trigger: CAAGGACATGCTGAAGTACAAGGTGACCTGCCAAAG...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCGCTCTTGTTTTGTTTaGGTGAAGACTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSRSCFV*VKTPLG
Trigger: ACCCAGTGGAGTCTTCACCAAAACAAAACAAGAGCG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATGGAGGAGTCTGCTATaGCCCTTCAACAGCATCCGG +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPWRSLL*PFNSIR
Trigger: CCGGATGCTGTTGAAGGGCAATAGCAGACTCCTCCA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCAAGGGCCCTGAACTCCTaGGATGCACCCATTCACATG +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPRALNS*DAPIHM
Trigger: CATGTGAATGGGTGCATCCAAGGAGTTCAGGGCCCT...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTTTAAATCAAGAATTTTaGGCCAGAGGTGAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGLNQEF*ARGEGG
Trigger: GCCACCCTCACCTCTGGCCAAAAATTCTTGATTTAA...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTGCTCAAAAATGTTCCTaGAGGAAAACCCTTGGAATG +
Preference number: 5 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALAQKCS*RKTLGM
Trigger: CATTCCAAGGGTTTTCCTCAAGGAACATTTTTGAGC...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp AGAAATGATGTTGTGCCAGGGACAAGCCAGGCTCCTGGCCTGACATACGCTCTTACGTCACCATCTCCTTaGGCATCAACTATTATGCTA +
Preference number: 5 (lower is better)
Translates to: RNDVVPGTSQAPGLTYALTSPSP*ASTIML
Trigger: TAGCATAATAGTTGATGCCAAAGGAGATGGTGACGT...AAGAGCGTATGTCAGGCCAGGAGCCTGGCTTGTCCCTGGCACAACATCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCCTCCTACTGCAGGAAACTGCCCTTGCTTAAAAGAAATGCACAGGCTCATACATTGGACGGCGACACCTaGTTTGCAGAATCCTGCATT +
Preference number: 5 (lower is better)
Translates to: PSYCRKLPLLKRNAQAHTLDGDT*FAESCI
Trigger: AATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAA...TGTATGAGCCTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCAGTAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp TTTCTCAAGTGCAACCAAGCTGGGAACAGCTGTAGTGGAGTTGGTTaGGTTTGTTCCGGTGCCATTGACAACAAGATTGTCCACCTTCGA +
Preference number: 5 (lower is better)
Translates to: FLKCNQAGNSCSGVG*VCSGAIDNKIVHLR
Trigger: TCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGCTGTTCCCAGCTTGGTTGCACTTGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp AGCAAGGGTTTTCTTCAGATCATAAGCTGTCATGACTCCAGCGTATaGCCCATCCACCACATTCCTGTTTTCTTCTGCCAGTGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SKGFLQIISCHDSSV*PIHHIPVFFCQCLD
Trigger: ATCAAGGCACTGGCAGAAGAAAACAGGAATGTGGTGGATGGGCCATACGCTGGAGTCATGACAGCTTATGATCTGAAGAAAACCCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTTGCAGGAAACTGCCCTaGCTTAAAAGAAATGCACAG +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSCRKLP*LKRNAQ
Trigger: CTGTGCATTTCTTTTAAGCAAGGGCAGTTTCCTGCA...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGAAGGTAGGGAGGCCTaGAACTTAGGGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTEGREA*NLGTAS
Trigger: GCTGGCTGTCCCTAAGTTCAAGGCCTCCCTACCTTC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGTCTCTCTCCTGCACCCTGCCCAAAGCAGACAGAACAACAGTATAGTGAAGGTTTGGTCTCCCACTTTTaGTTGAAGCGAACAAGAATC +
Preference number: 5 (lower is better)
Translates to: GLSPAPCPKQTEQQYSEGLVSHF*LKRTRI
Trigger: GATTCTTGTTCGCTTCAACAAAAAGTGGGAGACCAA...ACCTTCACTATACTGTTGTTCTGTCTGCTTTGGGCAGGGTGCAGGAGAGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTTCCCTCACATTCTGAAAGCTACCAGCCATTACGCCTTGCCCATCAGTTCTGGAGTTCATAAATTCTaGCAGCCTTGTTTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PFPHILKATSHYALPISSGVHKF*QPCFLG
Trigger: CCCAAGGAAACAAGGCTGCAAGAATTTATGAACTCC...AGAACTGATGGGCAAGGCGTAATGGCTGGTAGCTTTCAGAATGTGAGGGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GGAACTCACCCTCAGCTTCACGAAACTCCCAGCTTCCTAAATGAGCATGAATCTGGCTACAGAGATGCTTaGCAGATGGGAAATTCCAGT +
Preference number: 5 (lower is better)
Translates to: GTHPQLHETPSFLNEHESGYRDA*QMGNSS
Trigger: ACTGGAATTTCCCATCTGCAAAGCATCTCTGTAGCC...AGATTCATGCTCATTTAGGAAGCTGGGAGTTTCGTGAAGCTGAGGGTGAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTCTTCTGCCAGTGCCTaGATGTACCTTTTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LYNSGKQSSALYARTVHLSSASA*MYLLLR
Trigger: CCTCAGCAAAAGGTACATCAAGGCACTGGCAGAAGA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCGACTGGTTCTGCCTTTaGATTTCATTAATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSDWFCL*ISLMWW
Trigger: CCACCACATTAATGAAATCAAAAGGCAGAACCAGTC...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ACAGAGCATGGCAGCAATGATTCAGTGGGGTGGGAACTTATACAAAGGCAGAGCCAGAAACTTACAAACTaGTACAGAGCATGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TEHGSNDSVGWELIQRQSQKLTN*YRAWQQ
Trigger: TTGCTGCCATGCTCTGTACAAGTTTGTAAGTTTCTG...GCTCTGCCTTTGTATAAGTTCCCACCCCACTGAATCATTGCTGCCATGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATCACCAAGGTTTCCTTaGGACTTCTGCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPSPRFP*DFCPSS
Trigger: GGAAGAAGGGCAGAAGTCCAAAGGAAACCTTGGTGA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGAATCCAGCCCTTTCTaGAGGTTCTCAAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LYNSGKQSSALYARTVHLESSPF*RFSRLH
Trigger: GTGAAGCCTTGAGAACCTCAAGAAAGGGCTGGATTC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGTTTGTTCCGGTGCCATaGACAACAAGATTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LYNSGKQSSALYARTVHLFVPVP*TTRLST
Trigger: GGTGGACAATCTTGTTGTCAATGGCACCGGAACAAA...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGCTTTGGCAGGTCACCTaGTACTTCAGCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PCLQNPALLNPRSESHKMLWQVT*YFSMSL
Trigger: CAAGGACATGCTGAAGTACAAGGTGACCTGCCAAAG...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCAGAAGGGGTCTCACTaGCATCAGCATGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTQKGSH*HQHGDV
Trigger: GACATCTCCATGCTGATGCAAGTGAGACCCCTTCTG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp CGATTGGGCATAATTTGCATGATTAAATTCGGGTTCAGTACCAAATaGATCAAGGACTCGGAGCATGCACTGGTAATGAACCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: RLGIICMIKFGFSTK*IKDSEHALVMNPGW
Trigger: CCATCCTGGGTTCATTACCAGTGCATGCTCCGAGTCCTTGATTCATTTGGTACTGAACCCGAATTTAATCATGCAAATTATGCCCAATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATTCTTCATGATTTCCTaGAGCTCAGCCAGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPFFMIS*SSASEA
Trigger: AGCTTCACTGGCTGAGCTCAAGGAAATCATGAAGAA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp TTAAGGCTCCACAAAATCTGGGCTACAGAGATGCTTTGCAGATGGGAAATTCCATGGAGCCATAAACAGTaGCATGCACTTCCATGTATG +
Preference number: 5 (lower is better)
Translates to: LRLHKIWATEMLCRWEIPWSHKQ*HALPCM
Trigger: CATACATGGAAGTGCATGCAACTGTTTATGGCTCCA...TGGAATTTCCCATCTGCAAAGCATCTCTGTAGCCCAGATTTTGTGGAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGCTGCTGCCATCTGTTTaGAGCTGCCAGGTCCCCATG +
Preference number: 5 (lower is better)
Translates to: MELLSAINRFRILSRSAMLLPSV*SCQVPM
Trigger: CATGGGGACCTGGCAGCTCAAAACAGATGGCAGCAG...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTAGACTGGAGATACAATaGAGACGCACTGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTRLEIQ*RRTEQG
Trigger: TCCCTGCTCAGTGCGTCTCAATTGTATCTCCAGTCT...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGAGGCTGGTTGACACGTaGGCAACCAGCAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: MELLSAINRFRILSRSAMRLVDT*ATSSPK
Trigger: CTTGGGACTGCTGGTTGCCAACGTGTCAACCAGCCT...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 90 bp ATGTCATGGCCCAGTAAGTACAGAGATGTAATTAAATCACTCCATTaGACTAATTCACCAAGAGGGCCACCACTGAAAGCTGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: MSWPSKYRDVIKSLH*TNSPRGPPLKAVSA
Trigger: TGCAGAGACAGCTTTCAGTGGTGGCCCTCTTGGTGAATTAGTTCAATGGAGTGATTTAATTACATCTCTGTACTTACTGGGCCATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 90 bp TTCTTCCAGAAGCTATCCACTTTGCCATACACAAGGGACTGGTTCTaGCTTTTGATTTCATTAATGTGGTGGATATCACTGGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: FFQKLSTLPYTRDWF*LLISLMWWISLEFR
Trigger: CCTGAACTCCAGTGATATCCACCACATTAATGAAATCAAAAGGCAGAACCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCTGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CCTTGTTTGCAGAATCCTGCATTACTTAACCCCCGAAGTGAATCACACAAAATGTGGAGCCATAAACAGTaGCATGCACTTCCATGTATG +
Preference number: 5 (lower is better)
Translates to: PCLQNPALLNPRSESHKMWSHKQ*HALPCM
Trigger: CATACATGGAAGTGCATGCAACTGTTTATGGCTCCA...CATTTTGTGTGATTCACTTCGGGGGTTAAGTAATGCAGGATTCTGCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp CTCTACAACAGTGGAAAACAAAGCAGTGCTCTCTATGCCAGGACAGTACATTTGGTCTCCCACTTTTTGTaGAAGCGAACAAGAATCACA +
Preference number: 5 (lower is better)
Translates to: LYNSGKQSSALYARTVHLVSHFL*KRTRIT
Trigger: TGTGATTCTTGTTCGCTTCAACAAAAAGTGGGAGAC...CAAATGTACTGTCCTGGCATAGAGAGCACTGCTTTGTTTTCCACTGTTGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTGTAACCAGGATCTGTTaGAAGACACAGATGCAAACG +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTVTRIC*KTQMQT
Trigger: CGTTTGCATCTGTGTCTTCAAACAGATCCTGGTTAC...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 90 bp TTGACAACAAGATTGTCCACCTTCGACTCCAACTTGCCAATGCGCTaGAAAATGTTATCTAATAACACAGCAAGGGTTTTCTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: LTTRLSTFDSNLPMR*KMLSNNTARVFFRS
Trigger: TGATCTGAAGAAAACCCTTGCTGTGTTATTAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTTCGTAGGGATTTTTaGCTCTCCAAGGTAAATGAG +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLRRDF*LSKVNE
Trigger: CTCATTTACCTTGGAGAGCAAAAAATCCCTACGAAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTCTTGTGGCCTTTCGATaGGGCATAATTTGCATGATT +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLVAFR*GIICMI
Trigger: AATCATGCAAATTATGCCCAATCGAAAGGCCACAAG...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp GAAACTCCCAGCTTCCTAAATGAGCATGAATCTATTTATGTCCATCCGTCTACTTTGGTCTCCCACTTTTaGTTGAAGCGAACAAGAATC +
Preference number: 5 (lower is better)
Translates to: ETPSFLNEHESIYVHPSTLVSHF*LKRTRI
Trigger: GATTCTTGTTCGCTTCAACAAAAAGTGGGAGACCAA...AGTAGACGGATGGACATAAATAGATTCATGCTCATTTAGGAAGCTGGGAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTTGGACGGCGACACCTaGTTTGCAGAATCCTGCATT +
Preference number: 5 (lower is better)
Translates to: MELLSAINRFRILSRSAMLDGDT*FAESCI
Trigger: AATGCAGGATTCTGCAAACAAGGTGTCGCCGTCCAA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 90 bp TACAATATCAATGTAAATGAGCTCAACAATTCTGTCTCCTACAGTTaGGCAGCCAGATCGGTTTCCTACAACCTTCTTCATGATTTCCTT +
Preference number: 5 (lower is better)
Translates to: YNINVNELNNSVSYS*AARSVSYNLLHDFL
Trigger: AAGGAAATCATGAAGAAGGTTGTAGGAAACCGATCTGGCTGCCCAACTGTAGGAGACAGAATTGTTGAGCTCATTTACATTGATATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTCTCTCAGAGTTGGCTaGCCAATGAAAAAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: MELLSAINRFRILSRSAMSLRVG*PMKKSV
Trigger: CACAGACTTTTTCATTGGCAAGCCAACTCTGAGAGA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS-3UTR CAA 90 bp ATGGAACTGTTATCAGCTATAAATCGGTTTAGGATTCTATCAAGATCAGCAATGTCCCACAGTTGCTCCTaGAGAAACAGAAATGATGTT +
Preference number: 5 (lower is better)
Translates to: MELLSAINRFRILSRSAMSHSCS*RNRNDV
Trigger: AACATCATTTCTGTTTCTCAAGGAGCAACTGTGGGA...CATTGCTGATCTTGATAGAATCCTAAACCGATTTATAGCTGATAACAGTTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp CACACTCAGCCCCGAGACGCAGCAGAGGCGCTCCTGTaGGAGCTCAGTCGACCAGGGCGGGAGTCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: HTQPRDAAEALL*ELSRPGRESVL
Trigger: GAGGACGGACTCCCGCCCTGGTCGACTGAGCTCCCACAGGAGCGCCTCTGCTGCGTCTCGGGGCTGAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468758.1
ENST00000481801.5
CDS CAA 90 bp CTCTCCTGGCACACCTGCTTGCAGGACTGCCCGGGCTCAGCAAGCTaGACCTGTAGGGCGCTGAGGGGTGGCCACATCACTTGCCCATGG +
Preference number: 6 (lower is better)
Translates to: LSWHTCLQDCPGSAS*TCRALRGGHITCPW
Trigger: CCATGGGCAAGTGATGTGGCCACCCCTCAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp ATGAGCTGGCTCTCCTGGCACACCTGCTTGCAGGACTaGCCGGGCTCAGCAAGCTTGACCTGTAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: MSWLSWHTCLQD*PGSASLTCRAL
Trigger: CAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp CACACCTGCTTGCAGGACTGCCCGGGCTCAGCAAGCTaGACCTGTAGGGCGCTGAGGGGTGGCCACATCACT +
Preference number: 6 (lower is better)
Translates to: HTCLQDCPGSAS*TCRALRGGHIT
Trigger: AGTGATGTGGCCACCCCTCAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp GGCTCGCAGATGAGCTGGCTCTCCTGGCACACCTGCTaGCAGGACTGCCCGGGCTCAGCAAGCTTGACCTGT +
Preference number: 6 (lower is better)
Translates to: GSQMSWLSWHTC*QDCPGSASLTC
Trigger: ACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp AAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCCTGGCACACCTGCTaGCAGGACTGCCCGGGCTCAGCAAGCTTGACCTGTAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: KKEGSQMSWLSWHTC*QDCPGSASLTCRAL
Trigger: CAGCGCCCTACAGGTCAAGCTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 72 bp AGACCCTCTGGTGCCTGGGGTGGGCGCCTGCACAGCTaGAGAGCAGGAGGTCACCTTGAAACACACAGTGCT +
Preference number: 6 (lower is better)
Translates to: RPSGAWGGRLHS*RAGGHLETHSA
Trigger: AGCACTGTGTGTTTCAAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCGCCCACCCCAGGCACCAGAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TGGAAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCCTaGCACACCTGCTTGCAGGACTGCCCGGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: WKKEGSQMSWLS*HTCLQDCPGSA
Trigger: TGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTGAGGTGCTGGAAGAAAGAAGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGCTTGCAGGACTGCCCG +
Preference number: 6 (lower is better)
Translates to: LRCWKKEGSQMS*LSWHTCLQDCP
Trigger: CGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp GAGGGCACCAGGATGTCCTTGGCCAGCTCTGAGCTTTaGCAGGTCACCTTGTACTTCAGCATGTCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: EGTRMSLASSEL*QVTLYFSMSLS
Trigger: GGACAAGGACATGCTGAAGTACAAGGTGACCTGCCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp AGTGTGAGAGTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTCTGCTCCTTGTTGGGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SVRVCWSHSGSCVSW*PFLTSILLLVGQQQ
Trigger: CTGCTGCTGCCCAACAAGGAGCAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409645.5
CDS CAA 90 bp AGTGTGAGAGTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTCTCCTTGTTGGGCAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SVRVCWSHSGSCVSW*PFLTSILLVGQQQQ
Trigger: CTGCTGCTGCTGCCCAACAAGGAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481801.5
CDS TCA 72 bp AGGATCTGCTCGCGCAGCATGGAGCTGCTTTCAGGCTaGGTTCGCTGCTGGATGGTAAAGTGCAGAAGCATC +
Preference number: 6 (lower is better)
Translates to: RICSRSMELLSG*VRCWMVKCRSI
Trigger: GATGCTTCTGCACTTTACCATCCAGCAGCGAACTCAGCCTGAAAGCAGCTCCATGCTGCGCGAGCAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
CDS CAA 72 bp GTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTCTGCTCCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: VCWSHSGSCVSW*PFLTSILLLVG
Trigger: CCCAACAAGGAGCAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409645.5
CDS CAA 72 bp GTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTCTCCTTGTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: VCWSHSGSCVSW*PFLTSILLVGQ
Trigger: CTGCCCAACAAGGAGAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481801.5
CDS CAA 90 bp GCGTATGGCCCATCCACCACATTCCTGTTTTCTTCTGCCAGTGCCTaGATGTACCTTTTGCTGAGGTCCAGGATCTGCTCGCGCAGCATG +
Preference number: 6 (lower is better)
Translates to: AYGPSTTFLFSSASA*MYLLLRSRICSRSM
Trigger: CATGCTGCGCGAGCAGATCCTGGACCTCAGCAAAAGGTACATCAAGGCACTGGCAGAAGAAAACAGGAATGTGGTGGATGGGCCATACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
CDS TCA 72 bp TGGGCGCCTGCACAGCTGAAGAGCAGGAGGTCACCTTaGAACACACAGTGCTTATTCTTAGGGTCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: WAPAQLKSRRSP*NTQCLFLGSKE
Trigger: CTCCTTTGACCCTAAGAATAAGCACTGTGTGTTTCAAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp CTTTTCAAGGTTCTGCTTTTCTGCCAGGGACTTGATTaGTTGGATCCATGCGTCAGCCATTCGCCGGATCCG +
Preference number: 6 (lower is better)
Translates to: LFKVLLFCQGLD*LDPCVSHSPDP
Trigger: CGGATCCGGCGAATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp TTGACCTGTAGGGCGCTGAGGGGTGGCCACATCACTTaGCCATGGCAGAAGTCCTGTTTTTCAATGAAAGCA +
Preference number: 6 (lower is better)
Translates to: LTCRALRGGHIT*PWQKSCFSMKA
Trigger: TGCTTTCATTGAAAAACAGGACTTCTGCCATGGGCAAGTGATGTGGCCACCCCTCAGCGCCCTACAGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TCAAGGTTCTGCTTTTCTGCCAGGGACTTGATTGCTTaGATCCATGCGTCAGCCATTCGCCGGATCCGTAGT +
Preference number: 6 (lower is better)
Translates to: SRFCFSARDLIA*IHASAIRRIRS
Trigger: ACTACGGATCCGGCGAATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp ACACAGTGCTTATTCTTAGGGTCAAAGGAGGGCACCAGGATGTCCTaGGCCAGCTCTGAGCTTTGGCAGGTCACCTTGTACTTCAGCATG +
Preference number: 6 (lower is better)
Translates to: TQCLFLGSKEGTRMS*ASSELWQVTLYFSM
Trigger: CATGCTGAAGTACAAGGTGACCTGCCAAAGCTCAGAGCTGGCCAAGGACATCCTGGTGCCCTCCTTTGACCCTAAGAATAAGCACTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp CTGGGAACAGCTGTAGTGGAGTTGGTTGAGTTTGTTCCGGTGCCATaGACAACAAGATTGTCCACCTTCGACTCCAACTTGCCAATGCGC +
Preference number: 6 (lower is better)
Translates to: LGTAVVELVEFVPVP*TTRLSTFDSNLPMR
Trigger: GCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGCTGTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 72 bp AAAAGCCCAGCTTCTGAGAGGACAACTTCCACGGAGTaGAGAGAGCCATTGCTCTCTGGCAACTTCACCTGT +
Preference number: 6 (lower is better)
Translates to: KSPASERTTSTE*REPLLSGNFTC
Trigger: ACAGGTGAAGTTGCCAGAGAGCAATGGCTCTCTTCACTCCGTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
ENST00000488365.1
CDS GCA 72 bp ACCTTGTACTTCAGCATGTCCTTGTCCTTGTTGAGGTaGTGGAAGAAAGAAGGCTCGCAGATGAGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TLYFSMSLSLLR*WKKEGSQMSWL
Trigger: GAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACATGCTGAAGTACAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp TCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTTaGCTTTCCTCACTTCCATTATGCTTCAGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SAGLTLAPVSAG*LSSLPLCFSQR
Trigger: CCTTTGACTGAAGCATAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488365.1
CDS CCA 72 bp ACAAATTCATGGTGTAGGTTGAGTGTGAGAGTCTGCTaGTCTCACTCTGGCTCCTGTGTCAGCTGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: TNSWCRLSVRVC*SHSGSCVSWLP
Trigger: AGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACTCAACCTACACCATGAATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281923.4
ENST00000409645.5
ENST00000468758.1
ENST00000481801.5
ENST00000488365.1
CDS CCA 72 bp AAAAGCACATCCATTTGCGATAGCTTCCAGGGGAGCTaGGCCCTCGTAAGGGAACCCAAGTCCAACAAACAA +
Preference number: 6 (lower is better)
Translates to: KSTSICDSFQGS*ALVREPKSNKQ
Trigger: TTGTTTGTTGGACTTGGGTTCCCTTACGAGGGCCCAGCTCCCCTGGAAGCTATCGCAAATGGATGTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTCCTCCTGATTGTTGAGGTCAACAGTCCACACATGTaGCCGCCCGATGAAAACTTCAGCGTAAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: FLLIVEVNSPHM*PPDENFSVRML
Trigger: CAGCATCCTTACGCTGAAGTTTTCATCGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTGTACTTCAGCATGTCCTTGTCCTTGTTGAGGTGCTaGAAGAAAGAAGGCTCGCAGATGAGCTGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LYFSMSLSLLRC*KKEGSQMSWLS
Trigger: GGAGAGCCAGCTCATCTGCGAGCCTTCTTTCTTCCAGCACCTCAACAAGGACAAGGACATGCTGAAGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp GTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTATGCTTCAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: VCWSHSGSCVSW*PFLTSIMLQSK
Trigger: CTTTGACTGAAGCATAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488365.1
CDS CAA 90 bp TTCTTCCGCTTTCTCTTTTCAAGGTTCTGCTTTTCTGCCAGGGACTaGATTGCTTGGATCCATGCGTCAGCCATTCGCCGGATCCGTAGT +
Preference number: 6 (lower is better)
Translates to: FFRFLFSRFCFSARD*IAWIHASAIRRIRS
Trigger: ACTACGGATCCGGCGAATGGCTGACGCATGGATCCAAGCAATCAAGTCCCTGGCAGAAAAGCAGAACCTTGAAAAGAGAAAGCGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp TTGGTTGAGTTTGTTCCGGTGCCATTGACAACAAGATaGTCCACCTTCGACTCCAACTTGCCAATGCGCTGC +
Preference number: 6 (lower is better)
Translates to: LVEFVPVPLTTR*STFDSNLPMRC
Trigger: GCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp AGTGTGAGAGTCTGCTGGTCTCACTCTGGCTCCTGTGTCAGCTGGTaGCCTTTCCTCACTTCCATTATGCTTCAGTCAAAGGATTCTTCT +
Preference number: 6 (lower is better)
Translates to: SVRVCWSHSGSCVSW*PFLTSIMLQSKDSS
Trigger: AGAAGAATCCTTTGACTGAAGCATAATGGAAGTGAGGAAAGGCAACCAGCTGACACAGGAGCCAGAGTGAGACCAGCAGACTCTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488365.1
CDS TCA 72 bp TGCAACCAAGCTGGGAACAGCTGTAGTGGAGTTGGTTaGGTTTGTTCCGGTGCCATTGACAACAAGATTGTC +
Preference number: 6 (lower is better)
Translates to: CNQAGNSCSGVG*VCSGAIDNKIV
Trigger: GACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGCTGTTCCCAGCTTGGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp TCATTAATGTGGTGGATATCACTGGAGTTCAGGTGCTaGTCAACCACAAACCCCAGAAAGCTGTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SLMWWISLEFRC*STTNPRKLLSG
Trigger: CCCAGACAACAGCTTTCTGGGGTTTGTGGTTGAGCAGCACCTGAACTCCAGTGATATCCACCACATTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp GCTGTAGTGGAGTTGGTTGAGTTTGTTCCGGTGCCATaGACAACAAGATTGTCCACCTTCGACTCCAACTTG +
Preference number: 6 (lower is better)
Translates to: AVVELVEFVPVP*TTRLSTFDSNL
Trigger: CAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp TCAAGTGCAACCAAGCTGGGAACAGCTGTAGTGGAGTaGGTTGAGTTTGTTCCGGTGCCATTGACAACAAGA +
Preference number: 6 (lower is better)
Translates to: SSATKLGTAVVE*VEFVPVPLTTR
Trigger: TCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGCTGTTCCCAGCTTGGTTGCACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp GGATTCTTCTTTGCAAGCGGCCCAAAAGAAAATGGTAGCAGGATCTaGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGTTGGTCTGCC +
Preference number: 6 (lower is better)
Translates to: GFFFASGPKENGSRI*KQLAFRALDHCWSA
Trigger: GGCAGACCAACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAAGATCCTGCTACCATTTTCTTTTGGGCCGCTTGCAAAGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468758.1
ENST00000488365.1
CDS CAA 90 bp GTAGTGGAGTTGGTTGAGTTTGTTCCGGTGCCATTGACAACAAGATaGTCCACCTTCGACTCCAACTTGCCAATGCGCTGCAAAATGTTA +
Preference number: 6 (lower is better)
Translates to: VVELVEFVPVPLTTR*STFDSNLPMRCKML
Trigger: TAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS TCA 72 bp TGGTTTCTCGAAGAAGGAACTGCAGGTCCCGTCCACTaGGGATACCATGGTTTTTCACGTAACTGGGAATAT +
Preference number: 6 (lower is better)
Translates to: WFLEEGTAGPVH*GYHGFSRNWEY
Trigger: ATATTCCCAGTTACGTGAAAAACCATGGTATCCTCAGTGGACGGGACCTGCAGTTCCTTCTTCGAGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTTCTTCAGATCATAAGCTGTCATGACTCCAGCGTATaGCCCATCCACCACATTCCTGTTTTCTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: FLQIISCHDSSV*PIHHIPVFFCQ
Trigger: CTGGCAGAAGAAAACAGGAATGTGGTGGATGGGCCATACGCTGGAGTCATGACAGCTTATGATCTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp AAGGACTCGGAGCATGCACTGGTAATGAACCCAGGATaGTCCAAGAGTTTTCTTGAATTGAGCAAGTCCTAC +
Preference number: 6 (lower is better)
Translates to: KDSEHALVMNPG*SKSFLELSKSY
Trigger: GTAGGACTTGCTCAATTCAAGAAAACTCTTGGACCATCCTGGGTTCATTACCAGTGCATGCTCCGAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGTTaGTCTGCCTCTTACTGTTTTCCCATTGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LKQLAFRALDHC*SASYCFPIASL
Trigger: CAAGGAGGCAATGGGAAAACAGTAAGAGGCAGACCAACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468758.1
CDS CAA 72 bp CTTGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGTaGGTCTGCCTCTTACTGTTTTCCCATTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LEAISFQSPGSL*VCLLLFSHCLL
Trigger: AAGGAGGCAATGGGAAAACAGTAAGAGGCAGACCAACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468758.1
CDS CAA 90 bp GTTCCGGTGCCATTGACAACAAGATTGTCCACCTTCGACTCCAACTaGCCAATGCGCTGCAAAATGTTATCTAATAACACAGCAAGGGTT +
Preference number: 6 (lower is better)
Translates to: VPVPLTTRLSTFDSN*PMRCKMLSNNTARV
Trigger: AACCCTTGCTGTGTTATTAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGGCACCGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp TTAATTTTCTCAAGTGCAACCAAGCTGGGAACAGCTGTAGTGGAGTaGGTTGAGTTTGTTCCGGTGCCATTGACAACAAGATTGTCCACC +
Preference number: 6 (lower is better)
Translates to: LIFSSATKLGTAVVE*VEFVPVPLTTRLST
Trigger: GGTGGACAATCTTGTTGTCAATGGCACCGGAACAAACTCAACCAACTCCACTACAGCTGTTCCCAGCTTGGTTGCACTTGAGAAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp TTTGCAAGCGGCCCAAAAGAAAATGGTAGCAGGATCTaGAAGCAATTAGCTTTCAGAGCCCTGGATCACTGT +
Preference number: 6 (lower is better)
Translates to: FASGPKENGSRI*KQLAFRALDHC
Trigger: ACAGTGATCCAGGGCTCTGAAAGCTAATTGCTTCAAGATCCTGCTACCATTTTCTTTTGGGCCGCTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468758.1
ENST00000488365.1
CDS TCA 72 bp GCTGGTTCAATATCTTATGATTCAGGAACTGTAAGCTaGGGGGAAATCTGGCTAGGCAACAAGAAGCTAAGC +
Preference number: 6 (lower is better)
Translates to: AGSISYDSGTVS*GEIWLGNKKLS
Trigger: GCTTAGCTTCTTGTTGCCTAGCCAGATTTCCCCTCAGCTTACAGTTCCTGAATCATAAGATATTGAACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281923.4
CDS GCA 72 bp CAACAAGATTGTCCACCTTCGACTCCAACTTGCCAATaGGCTGCAAAATGTTATCTAATAACACAGCAAGGG +
Preference number: 6 (lower is better)
Translates to: QQDCPPSTPTCQ*AAKCYLITQQG
Trigger: CCCTTGCTGTGTTATTAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp ATTTCATTAATGTGGTGGATATCACTGGAGTTCAGGTaGTGCTCAACCACAAACCCCAGAAAGCTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: ISLMWWISLEFR*CSTTNPRKLLS
Trigger: AGACAACAGCTTTCTGGGGTTTGTGGTTGAGCAGCACCTGAACTCCAGTGATATCCACCACATTAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp AGATTGTCCACCTTCGACTCCAACTTGCCAATGCGCTaGAAAATGTTATCTAATAACACAGCAAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: RLSTFDSNLPMR*KMLSNNTARVF
Trigger: GAAAACCCTTGCTGTGTTATTAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp TCCGTTAATGATATCTGCCACATTAATTTTCTCAAGTaGAACCAAGCTGGGAACAGCTGTAGTGGAGTTGGT +
Preference number: 6 (lower is better)
Translates to: SVNDICHINFLK*NQAGNSCSGVG
Trigger: ACCAACTCCACTACAGCTGTTCCCAGCTTGGTTGCACTTGAGAAAATTAATGTGGCAGATATCATTAACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp AATGTAAATGAGCTCAACAATTCTGTCTCCTACAGTTaGGCAGCCAGATCGGTTTCCTACAACCTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: NVNELNNSVSYS*AARSVSYNLLH
Trigger: ATGAAGAAGGTTGTAGGAAACCGATCTGGCTGCCCAACTGTAGGAGACAGAATTGTTGAGCTCATTTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp CTCACTTCCATTATGCTTCAGTCAAAGGATTCTTCTTaGCAAGCGGCCCAAAAGAAAATGGTAGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: LTSIMLQSKDSS*QAAQKKMVAGS
Trigger: AGATCCTGCTACCATTTTCTTTTGGGCCGCTTGCAAAGAAGAATCCTTTGACTGAAGCATAATGGAAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488365.1
CDS TCA 72 bp CCCAGTAAGTACAGAGATGTAATTAAATCACTCCATTaGACTAATTCACCAAGAGGGCCACCACTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: PSKYRDVIKSLH*TNSPRGPPLKA
Trigger: AGCTTTCAGTGGTGGCCCTCTTGGTGAATTAGTTCAATGGAGTGATTTAATTACATCTCTGTACTTACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTGAGCTCAGCCAGTGAAGCTGAAATCCTAATGTCATaGCCCAGTAAGTACAGAGATGTAATTAAATCACTC +
Preference number: 6 (lower is better)
Translates to: LSSASEAEILMS*PSKYRDVIKSL
Trigger: GAGTGATTTAATTACATCTCTGTACTTACTGGGCCATGACATTAGGATTTCAGCTTCACTGGCTGAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CCA 72 bp TTCCAGAAGCTATCCACTTTGCCATACACAAGGGACTaGTTCTGCCTTTTGATTTCATTAATGTGGTGGATA +
Preference number: 6 (lower is better)
Translates to: FQKLSTLPYTRD*FCLLISLMWWI
Trigger: TATCCACCACATTAATGAAATCAAAAGGCAGAACCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp CCATTGACAACAAGATTGTCCACCTTCGACTCCAACTaGCCAATGCGCTGCAAAATGTTATCTAATAACACA +
Preference number: 6 (lower is better)
Translates to: PLTTRLSTFDSN*PMRCKMLSNNT
Trigger: TGTGTTATTAGATAACATTTTGCAGCGCATTGGCAAGTTGGAGTCGAAGGTGGACAATCTTGTTGTCAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS GCA 72 bp ACTGGGAATATTCTTTGTGCTGGAGCCATAAACAGTTaGATGCACTTCCATGTATGTGTGAATAATGTCCAA +
Preference number: 6 (lower is better)
Translates to: TGNILCAGAINS*MHFHVCVNNVQ
Trigger: TTGGACATTATTCACACATACATGGAAGTGCATGCAACTGTTTATGGCTCCAGCACAAAGAATATTCCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp AGGGTAGCCGTCCATAGGAGGCAATACACATTTTTCTaGAGCTCCGTTAATGATATCTGCCACATTAATTTT +
Preference number: 6 (lower is better)
Translates to: RVAVHRRQYTFF*SSVNDICHINF
Trigger: AAAATTAATGTGGCAGATATCATTAACGGAGCTCAAGAAAAATGTGTATTGCCTCCTATGGACGGCTACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 90 bp CATGCACTGGTAATGAACCCAGGATGGTCCAAGAGTTTTCTTGAATaGAGCAAGTCCTACAATATCAATGTAAATGAGCTCAACAATTCT +
Preference number: 6 (lower is better)
Translates to: HALVMNPGWSKSFLE*SKSYNINVNELNNS
Trigger: AGAATTGTTGAGCTCATTTACATTGATATTGTAGGACTTGCTCAATTCAAGAAAACTCTTGGACCATCCTGGGTTCATTACCAGTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp GTAATGAACCCAGGATGGTCCAAGAGTTTTCTTGAATaGAGCAAGTCCTACAATATCAATGTAAATGAGCTC +
Preference number: 6 (lower is better)
Translates to: VMNPGWSKSFLE*SKSYNINVNEL
Trigger: GAGCTCATTTACATTGATATTGTAGGACTTGCTCAATTCAAGAAAACTCTTGGACCATCCTGGGTTCATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5
CDS CAA 72 bp CCAATGAATTATGATCAGCTTCTTCGTAGGGATTTTTaGCTCTCCAAGGTAAATGAGGACACCAATTTTCAA +
Preference number: 6 (lower is better)
Translates to: PMNYDQLLRRDF*LSKVNEDTNFQ
Trigger: TTGAAAATTGGTGTCCTCATTTACCTTGGAGAGCAAAAAATCCCTACGAAGAAGCTGATCATAATTCATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281923.4
ENST00000409645.5