RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT4C (Homo sapiens)

Ensembl gene IDs: ENSG00000182050, ENSG00000285137

Ensembl transcript IDs: ENST00000547225.5, ENST00000548651.5, ENST00000550365.1, ENST00000551751.1, ENST00000551921.2, ENST00000552435.6, ENST00000552808.6, ENST00000602941.6, ENST00000611864.4, ENST00000620241.4, ENST00000621808.4, ENST00000635762.1, ENST00000636211.1, ENST00000636416.1, ENST00000636470.1, ENST00000636626.1, ENST00000637362.1, ENST00000637408.1, ENST00000637470.1, ENST00000637621.1, ENST00000637661.1, ENST00000638103.1, ENST00000642741.1, ENST00000643295.2, ENST00000643627.1, ENST00000644829.1, ENST00000645144.1, ENST00000646270.1, ENST00000646486.1, ENST00000646655.1, ENST00000647507.1

Found 1127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTGAGGCCCCAGAGAGCCCTCGAGAAATGCAAATAAACTATTACTaGCCTCCCTTGGATTATGATGAAAACCGTGGAGTCTTTCTATTC +
Preference number: 1 (lower is better)
Translates to: SEAPESPREMQINYY*PPLDYDENRGVFLF
Trigger: GAATAGAAAGACTCCACGGTTTTCATCATAATCCAAGGGAGGTCAGTAATAGTTTATTTGCATTTCTCGAGGGCTCTCTGGGGCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 90 bp CAGATCAACACTATTGGGCACCCAGTTATTTGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCTACATTACCTTGGTTTGGACAACTG +
Preference number: 1 (lower is better)
Translates to: QINTIGHPVIWWYAE*KYVALSTLPWFGQL
Trigger: CAGTTGTCCAAACCAAGGTAATGTAGATAAAGCTACATATTTTCACTCAGCGTACCACCAAATAACTGGGTGCCCAATAGTGTTGATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 90 bp GCATCAGATCAACACTATTGGGCACCCAGTTATTTGGTGGTACGCTaGGTGAAAATATGTAGCTTTATCTACATTACCTTGGTTTGGACA +
Preference number: 1 (lower is better)
Translates to: ASDQHYWAPSYLVVR*VKICSFIYITLVWT
Trigger: TGTCCAAACCAAGGTAATGTAGATAAAGCTACATATTTTCACTCAGCGTACCACCAAATAACTGGGTGCCCAATAGTGTTGATCTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp AGGTTAAGTAAATTTCCTCATATTGGGAGGCTGGTAATGCAGAACTaGGTGTCAAAATCAAGTCTGTATGAACCTTCTGTTTTGTCTCCC +
Preference number: 1 (lower is better)
Translates to: RLSKFPHIGRLVMQN*VSKSSLYEPSVLSP
Trigger: GGGAGACAAAACAGAAGGTTCATACAGACTTGATTTTGACACCCAGTTCTGCATTACCAGCCTCCCAATATGAGGAAATTTACTTAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp TCCAACTCCATCATTTTCCAGTCATTCTTGAGACTGTCAACTCTATaGGCATTGTTTAGCAGCCTCGAAACACTGAACTTTTTACAGTCT +
Preference number: 1 (lower is better)
Translates to: SNSIIFQSFLRLSTL*ALFSSLETLNFLQS
Trigger: AGACTGTAAAAAGTTCAGTGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAATGATGGAGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 90 bp TTCCCAGAAGAATATGTAAGGGGTTACAACTCATTTCAGGGAGTCTaGCTAGCTCTTGATATTACATGTCTTTGGCATACAATTGTGTAC +
Preference number: 1 (lower is better)
Translates to: FPEEYVRGYNSFQGV*LALDITCLWHTIVY
Trigger: GTACACAATTGTATGCCAAAGACATGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGAGTTGTAACCCCTTACATATTCTTCTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 90 bp GATTATTGGCCTGTGTCCCACCCATTATTCACATATAGAATGGGTTaGATTATCCTCTCCTTGGAAATATCTTTCAAAGTGGGTAATGAG +
Preference number: 1 (lower is better)
Translates to: DYWPVSHPLFTYRMG*IILSLEISFKVGNE
Trigger: CTCATTACCCACTTTGAAAGATATTTCCAAGGAGAGGATAATGCAACCCATTCTATATGTGAATAATGGGTGGGACACAGGCCAATAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 90 bp CTGACAACTACTGATATCGTCACATGGTCCTTTAGTGACCAAAAATaGACAGTTGTAAGAATGCAAGTGTTACTTGTATTGAAAACCGGA +
Preference number: 1 (lower is better)
Translates to: LTTTDIVTWSFSDQK*TVVRMQVLLVLKTG
Trigger: TCCGGTTTTCAATACAAGTAACACTTGCATTCTTACAACTGTGCATTTTTGGTCACTAAAGGACCATGTGACGATATCAGTAGTTGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 90 bp GCACAGAAATACACCAATAAGCACATACCAAAGTCAATTCTGAAATaGGTTACAAAACTGTTCAGTGGTGGTCTTCCTATTGTAACAGCT +
Preference number: 1 (lower is better)
Translates to: AQKYTNKHIPKSILK*VTKLFSGGLPIVTA
Trigger: AGCTGTTACAATAGGAAGACCACCACTGAACAGTTTTGTAACTCATTTCAGAATTGACTTTGGTATGTGCTTATTGGTGTATTTCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 90 bp CTATGTGGAACCATTGGTTGGACACATAAAATGAGAGTATGTAGATaGGAGCCCTTTGCTGCTGGCAAAGCTTTAAAAATATGTTATTAT +
Preference number: 1 (lower is better)
Translates to: LCGTIGWTHKMRVCR*EPFAAGKALKICYY
Trigger: ATAATAACATATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCGCATCTACATACTCTCATTTTATGTGTCCAACCAATGGTTCCACATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp TCTCAGAAAATATTGGGATTATTGAAGCAAATTCTACCCTGGACTTaGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGA +
Preference number: 1 (lower is better)
Translates to: SQKILGLLKQILPWT*SKCDEQINEVEGTR
Trigger: TCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTTCAATAATCCCAATATTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp TGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTaGAACCAATCCAAATGTCCAACAATGATAGACTGGATTAAGAAA +
Preference number: 1 (lower is better)
Translates to: CTRMFIAALFTIAKT*NQSKCPTMIDWIKK
Trigger: TTTCTTAATCCAGTCTATCATTGTTGGACATTTGGATTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 90 bp ATATGTAAGGGGTTACAACTCATTTCAGGGAGTCTGCCTAGCTCTTaGTATTACATGTCTTTGGCATACAATTGTGTACCTTTTATCATT +
Preference number: 1 (lower is better)
Translates to: ICKGLQLISGSLPSS*YYMSLAYNCVPFII
Trigger: AATGATAAAAGGTACACAATTGTATGCCAAAGACATGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGAGTTGTAACCCCTTACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp ATACCAAGTCAAATACCTTTGAATTTGATTCTTAACAAATCTTTGTaGCTGAGAAACCATGAGATTTCATTCTGGCATGTCCCCAGAATG +
Preference number: 1 (lower is better)
Translates to: IPSQIPLNLILNKSL*LRNHEISFWHVPRM
Trigger: CATTCTGGGGACATGCCAGAATGAAATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAGAATCAAATTCAAAGGTATTTGACTTGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 90 bp AGTTTACATTACCGAGTTTATTTTCTAAGGGTAGTGAATAACTCCTaGCAACTACTGATATCGTCACATGGTCCTTTAGTGACCAAAAAT +
Preference number: 1 (lower is better)
Translates to: SLHYRVYFLRVVNNS*QLLISSHGPLVTKN
Trigger: ATTTTTGGTCACTAAAGGACCATGTGACGATATCAGTAGTTGTCAGGAGTTATTCACTACCCTTAGAAAATAAACTCGGTAATGTAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 90 bp AACTCATTTCAGGGAGTCTGCCTAGCTCTTGATATTACATGTCTTTaGCATACAATTGTGTACCTTTTATCATTGACAGTGAAGAAAATA +
Preference number: 1 (lower is better)
Translates to: NSFQGVCLALDITCL*HTIVYLLSLTVKKI
Trigger: TATTTTCTTCACTGTCAATGATAAAAGGTACACAATTGTATGCCAAAGACATGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAGGTGGAACTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTRWNLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAAGTTCCACCT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATGCCCATCAAAGCAGTaGGACTGTGTGCTATGTCCA +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTCPSKQ*DCVLCP
Trigger: TGGACATAGCACACAGTCTCACTGCTTTGATGGGCA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGAATAAGGACACTCTaGGCCCGGCGCGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGIRTL*ARRGGS
Trigger: TGAGCCACCGCGCCGGGCCCAGAGTGTCCTTATTCC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACTCGGCTGTTTCCTCTaGCAGTTCTGTGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTLGCFL*QFCGKE
Trigger: TTCTTTACCACAGAACTGTCAGAGGAAACAGCCGAG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCTGGTCTTGAGCTCCTaGTTTCAGGAGTTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLVLSS*FQEFLA
Trigger: GGCCAAGAACTCCTGAAATCAGGAGCTCAAGACCAG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGCTGAGGCAGGAGAATaGCGTGACCCCAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAAEAGE*RDPRRW
Trigger: CCACCTCCTGGGGTCACGCCATTCTCCTGCCTCAGC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACAAACAGCAGTGGGTTaGAGGCAATGCTGTTTATAT +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTQTAVG*RQCCLY
Trigger: ATATAAACAGCATTGCCTTCAACCCACTGCTGTTTG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCTCGGCTGTTTCCTCTaGCAGTTCTGTGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLGCFL*QFCGKE
Trigger: TTCTTTACCACAGAACTGTCAGAGGAAACAGCCGAG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAAATGTCTGTACGAATaGGCTAACTACTATAGGCCT +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTKCLYE*ANYYRP
Trigger: AGGCCTATAGTAGTTAGCTCATTCGTACAGACATTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGAGTTAGAGCTTTGTTaGTTGAGATATGTGGAACTG +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTELELC*LRYVEL
Trigger: CAGTTCCACATATCTCAATCAACAAAGCTCTAACTC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTTGTAGCAAACACATaGCTCATCATTGCCCAAATC +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTFVANT*LIIAQI
Trigger: GATTTGGGCAATGATGAGTCATGTGTTTGCTACAAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATTGCTCCTAACACATaGGTGGCTAAAATTGCAAAC +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTIAPNT*VAKIAN
Trigger: GTTTGCAATTTTAGCCACTCATGTGTTAGGAGCAAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAACTTTGGGGTTTACTaGTGTTTTCCAACATCCGAA +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTNFGVY*CFPTSE
Trigger: TTCGGATGTTGGAAAACATCAGTAAACCCCAAAGTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTGGGCTATGACTAAATaGGACAAGGCATACATGCTG +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSWAMTK*DKAYML
Trigger: CAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGCCATGTTGGTGTTCTaGATCTTAAGAGAAGACTAT +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTAMLVF*ILREDY
Trigger: ATAGTCTTCTCTTAAGATGCAGAACACCAACATGGC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATTCCCAGAGAATACTaGCCCAGTAAGAAATGGAAT +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTIPREY*PSKKWN
Trigger: ATTCCATTTCTTACTGGGCCAGTATTCTCTGGGAAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAACAGATTAATGAGGTaGAAGGGACTAGAACTTTGG +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTNRLMR*KGLELW
Trigger: CCAAAGTTCTAGTCCCTTCCACCTCATTAATCTGTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGAGCTCAGGAATGGGTaGAATTCTTCCCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYELRNG*NSSPEM
Trigger: CATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACAGATTTATAAAGTATaGCCTATAGCATCCAACTCC +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTQIYKV*PIASNS
Trigger: GGAGTTGGATGCTATAGGTCATACTTTATAAATCTG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTTTACACATCTGGATaGTCAGAAAGGCCTCCTTAC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSFYTSG*SERPPY
Trigger: GTAAGGAGGCCTTTCTGAGCATCCAGATGTGTAAAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCTGGTAATGCAGAACTaGGTGTCAAAATCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLVMQN*VSKSSL
Trigger: CAGACTTGATTTTGACACCCAGTTCTGCATTACCAG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTGGATCATGATTATTaGCCTGTGTCCCACCCATTA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLDHDY*PVSHPL
Trigger: TAATGGGTGGGACACAGGCCAATAATCATGATCCAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCACAGTGAAATGCACATaGAATCTTCACACAGTGTCT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSTVKCT*NLHTVS
Trigger: AGACACTGTGTGAAGATTTCATGTGCATTTCACTGT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGAGCTCAGGAATGGGTaGAATTCTTCCCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAELRNG*NSSPEM
Trigger: CATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCACAACAATTAGCATGTaGCATGCTCTCAGCAAATCA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSTTISM*HALSKS
Trigger: TGATTTGCTGAGAGCATGTCACATGCTAATTGTTGT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTCAAGTCTGAATTATaGCTTCACTACTGTGTCGTC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSFKSEL*LHYCVV
Trigger: GACGACACAGTAGTGAAGTCATAATTCAGACTTGAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTGAGTCTCTATGGTTaGCTATATGCTGTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLSLYG*LYAVKE
Trigger: TTCCTTCACAGCATATAGTCAACCATAGAGACTCAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAGTCAAATCAAAAACTaGTTTGGTCTCAAATCCATG +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSQIKN*FGLKSM
Trigger: CATGGATTTGAGACCAAAGCAGTTTTTGATTTGACT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTCTATAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTFYKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTATAGAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGCCATGTTGGTGTTCTaGATCTTAAGAGAAGACTAT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSAMLVF*ILREDY
Trigger: ATAGTCTTCTCTTAAGATGCAGAACACCAACATGGC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACTGGATAGAAAGAGATaGCCCAGGATACAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALDRKR*PRIQRA
Trigger: TGCCCTCTGTATCCTGGGCCATCTCTTTCTATCCAG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACTTAACAAATCTTTGTaGCTGAGAAACCATGAGATT +
Preference number: 2 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTLNKSL*LRNHEI
Trigger: AATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTCTCTGGACAAAATATaGAAAGGTAGGCTGAATAAC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSSLDKI*KGRLNN
Trigger: GTTATTCAGCCTACCTTTTCATATTTTGTCCAGAGA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATACTCCTGACAACTACTaGTATCGTCACATGGTCCTT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYTPDNY*YRHMVL
Trigger: AAGGACCATGTGACGATATCAGTAGTTGTCAGGAGT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAATAATGATACAAGGTaGCTTGTAGGACTCTGGATA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSNNDTR*LVGLWI
Trigger: TATCCAGAGTCCTACAAGTCACCTTGTATCATTATT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTGGCTGAGAAACCATaGGATTTCATTCTGGCATGT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVAEKP*DFILAC
Trigger: ACATGCCAGAATGAAATCTCATGGTTTCTCAGCCAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCAGATTTATAAAGTATaGCCTATAGCATCCAACTCC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSQIYKV*PIASNS
Trigger: GGAGTTGGATGCTATAGGTCATACTTTATAAATCTG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTGCACGGACTACATTaGTTAGAGTCTAATTTTTGG +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLHGLH*LESNFW
Trigger: CCAAAAATTAGACTCTAATCAATGTAGTCCGTGCAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGAATTGAATTGGATTTaGGGAGGAAAACCCATATTC +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSELNWI*GGKPIF
Trigger: GAATATGGGTTTTCCTCCTCAAATCCAATTCAATTC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCTTCCTTTCATGACATaGATGAACTCTAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYLPFMT*MNSSSG
Trigger: GCCACTGCTAGAGTTCATGCATGTCATGAAAGGAAG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAAGCAAATTCTACCCTaGACTTGGAGTAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSKQILP*TWSKCD
Trigger: ATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTGGTATGTTTGGGGCTaGTGTTATGAAAGACTATTA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSWYVWG*CYERLL
Trigger: TAATAGTCTTTCATAACACCAGCCCCAAACATACCA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGATCCTTGGATGATTaGCCAACTTATCCAAACACA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGSLDD*PTYPNT
Trigger: TGTGTTTGGATAAGTTGGTCAATCATCCAAGGATCC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTTGTTTCTATGCCTCTaGGACAAGATTACTAGACCC +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYLFLCL*DKITRP
Trigger: GGGTCTAGTAATCTTGTCTCAGAGGCATAGAAACAA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTGGGCTATGACTAAATaGGACAAGGCATACATGCTG +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKWAMTK*DKAYML
Trigger: CAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGTGGGAACTGAACATTaGGAACACATAGACACAGGA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAVGTEH*EHIDTG
Trigger: TCCTGTGTCTATGTGTTCTCAATGTTCAGTTCCCAC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTTTTCCAGTCATTCTTaGGACTGTCAACTCTATGGG +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYFSSHS*DCQLYG
Trigger: CCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATGATCGGTTTAGATTaGTTTAACTTGAAGGACACT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSMIGLD*FNLKDT
Trigger: AGTGTCCTTCAAGTTAAAGCAATCTAAACCGATCAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACCTTATTGCCCTAGATaGCTTTTCTCTGGACCTAGA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAPYCPR*LFSGPR
Trigger: TCTAGGTCCAGAGAAAAGGCATCTAGGGCAATAAGG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACTTCTCAGGAGCCCCTaGAATTTCAAACCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALLRSP*NFKPWN
Trigger: ATTCCAAGGTTTGAAATTGCAGGGGCTCCTGAGAAG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAGTTTGGTAAATCTTTaGTTTACAGGGCTTCAAGTT +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSSLVNL*FTGLQV
Trigger: AACTTGAAGCCCTGTAAAGCAAAGATTTACCAAACT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCACATTTTTAGGTGTCTaGCAAGTATCCTCTAAATCA +
Preference number: 2 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSTFLGV*QVSSKS
Trigger: TGATTTAGAGGATACTTGCCAGACACCTAAAAATGT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCACACTAAGGTGTCCTaGATTACTTTAACGGACACA +
Preference number: 2 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELHTKVS*ITLTDT
Trigger: TGTGTCCGTTAAAGTAATTCAGGACACCTTAGTGTG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGGATCCTTGGATGATTaGCCAACTTATCCAAACACA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKGSLDD*PTYPNT
Trigger: TGTGTTTGGATAAGTTGGTCAATCATCCAAGGATCC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTGTTTCTATGCCTCTaGGACAAGATTACTAGACCC +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALFLCL*DKITRP
Trigger: GGGTCTAGTAATCTTGTCTCAGAGGCATAGAAACAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTGTATGGCAATTAAATaGCTCAGCCATTCATGTCTC +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYCMAIK*LSHSCL
Trigger: GAGACATGAATGGCTGAGTCATTTAATTGCCATACA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAGAAAAATTCTGTTTTaGGAGAGATGGCCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYRKILF*ERWPPL
Trigger: TAGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAACTTTGGGGTTTACTaGTGTTTTCCAACATCCGAA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYNFGVY*CFPTSE
Trigger: TTCGGATGTTGGAAAACATCAGTAAACCCCAAAGTT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACTCATAGGTGGGAACTaGACATTGAGAACACATAGA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALIGGN*TLRTHR
Trigger: TCTATGTGTTCTCAATGTTCAGTTCCCACCTATGAG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTGCTTGGGTTTGCCATaGATCATAAATACCAAGTCA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYCLGLP*IINTKS
Trigger: TGACTTGGTATTTATGATTCATGGCAAACCCAAGCA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTCTGACCCAGCCACTTaGATAAATAAGTTGTGTTGT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSDPAT*INKLCC
Trigger: ACAACACAACTTATTTATTCAAGTGGCTGGGTCAGA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGGTAAAAATACAAACTaGACTCCTTCAGCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAGKNTN*TPSAKG
Trigger: CCCCTTAGCTGAAGGAGTTCAGTTTGTATTTTTACC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAACATCCAACTTCACTaGTACCCTCAGCAATGTTTC +
Preference number: 2 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELNIQLH*YPQQCF
Trigger: GAAACATTGCTGAGGGTAGCAGTGAAGTTGGATGTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATTCTACCCTGGACTTaGAGTAAATGTGATGAACAG +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYILPWT*SKCDEQ
Trigger: CTGTTCATCACATTTACTCCAAGTCCAGGGTAGAAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGATTTCATGGCTATGTaGAACCATTGGTTGGACACA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVADFMAM*NHWLDT
Trigger: TGTGTCCAACCAATGGTTCCACATAGCCATGAAATC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 90 bp TCCATCATTTTCCAGTCATTCTTGAGACTGTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACACTGAACTTTTTACAGTCTTATTGG +
Preference number: 2 (lower is better)
Translates to: SIIFQSFLRLSTLWA*FSSLETLNFLQSYW
Trigger: CCAATAAGACTGTAAAAAGTTCAGTGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAATGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCACAGATGTAGAAACTaGGTTTCAAGAAGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHRCRN*VSRRLS
Trigger: ACTTAACCTTCTTGAAACTCAGTTTCTACATCTGTG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTCTCTGGACAAAATATaGAAAGGTAGGCTGAATAAC +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSLDKI*KGRLNN
Trigger: GTTATTCAGCCTACCTTTTCATATTTTGTCCAGAGA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTTAGCTTTCAATTATaGACACTCTCAGCCTCTATT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVSFQL*TLSASI
Trigger: AATAGAGGCTGAGAGTGTTCATAATTGAAAGCTAAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTCAATAGTCAGAATTaGATGAGAGATAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVNSQN*MRDRLL
Trigger: CAACAACCTATCTCTCATTCAATTCTGACTATTGAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTTGTAGCAAACACATaGCTCATCATTGCCCAAATC +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAFVANT*LIIAQI
Trigger: GATTTGGGCAATGATGAGTCATGTGTTTGCTACAAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCT +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKWWYAE*KYVALS
Trigger: AGATAAAGCTACATATTTTCACTCAGCGTACCACCA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTTAGAAATACCATTTaGCCCAGCCATCCCATTACT +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAFRNTI*PSHPIT
Trigger: AGTAATGGGATGGCTGGGTCAAATGGTATTTCTAAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTGAGTCTCTATGGTTaGCTATATGCTGTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALSLYG*LYAVKE
Trigger: TTCCTTCACAGCATATAGTCAACCATAGAGACTCAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATCCTATTGTAACAGCTaGTTTCATGGCTATGTGGAA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVASYCNS*FHGYVE
Trigger: TTCCACATAGCCATGAAATCAGCTGTTACAATAGGA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCAGGAAAGAAGAACTTaGTTGAGGCAAAATCATGAA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYQERRT*LRQNHE
Trigger: TTCATGATTTTGCCTCAAGCAAGTTCTTCTTTCCTG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAGCAGTGAGACTGTGTaGTATGTCCAGTTTTATTCA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVASSETV*YVQFYS
Trigger: TGAATAAAACTGGACATAGCACACAGTCTCACTGCT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCCTACTTTAAGGAGATaGCTACTTAGGGTACTTTTT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYPTLRR*LLRVLF
Trigger: AAAAAGTACCCTAAGTAGCCATCTCCTTAAAGTAGG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATACTGATATCGTCACATaGTCCTTTAGTGACCAAAAA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYTDIVT*SFSDQK
Trigger: TTTTTGGTCACTAAAGGACCATGTGACGATATCAGT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAAAACTGTTCAGTGGTaGTCTTCCTATTGTAACAGC +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAKTVQW*SSYCNS
Trigger: GCTGTTACAATAGGAAGACCACCACTGAACAGTTTT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 90 bp GATACGTACCAAAATTGTCTTTTGACCCTCTCAGGGAGTCAAGTTTaGATTTGCTTGAATACAAGCAAGTCGAGCTATGGTAATTTGCAA +
Preference number: 2 (lower is better)
Translates to: DTYQNCLLTLSGSQV*ICLNTSKSSYGNLQ
Trigger: TTGCAAATTACCATAGCTCGACTTGCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGAGAGGGTCAAAAGACAATTTTGGTACGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 2 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCACAGATGTAGAAACTaGGTTTCAAGAAGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKHRCRN*VSRRLS
Trigger: ACTTAACCTTCTTGAAACTCAGTTTCTACATCTGTG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATCTCTAATGTGCTGTaGTTTTCAAAGGATGTCATG +
Preference number: 2 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELISNVL*FSKDVM
Trigger: CATGACATCCTTTGAAAATCACAGCACATTAGAGAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGTTAGCTTTCAATTATaGACACTCTCAGCCTCTATT +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKVSFQL*TLSASI
Trigger: AATAGAGGCTGAGAGTGTTCATAATTGAAAGCTAAC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGATTTTGAGTTGGAATTaGTATAGGGGAATCCTTGGA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKILSWN*YRGILG
Trigger: TCCAAGGATTCCCCTATATCAATTCCAACTCAAAAT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAATTTTGAGTTGGAATTaGTATAGGGGAATCCTTGGA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAILSWN*YRGILG
Trigger: TCCAAGGATTCCCCTATATCAATTCCAACTCAAAAT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCTCTTTAGCCAGAAATaGCTGAGAAATTTTGAGTTG +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKLFSQK*LRNFEL
Trigger: CAACTCAAAATTTCTCAGTCATTTCTGGCTAAAGAG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTGCACGGACTACATTaGTTAGAGTCTAATTTTTGG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALHGLH*LESNFW
Trigger: CCAAAAATTAGACTCTAATCAATGTAGTCCGTGCAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACAGGAAAGAAGAACTTaGTTGAGGCAAAATCATGAA +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAQERRT*LRQNHE
Trigger: TTCATGATTTTGCCTCAAGCAAGTTCTTCTTTCCTG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATGATCGGTTTAGATTaGTTTAACTTGAAGGACACT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYMIGLD*FNLKDT
Trigger: AGTGTCCTTCAAGTTAAAGCAATCTAAACCGATCAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTACATGTGCATAACGTaGAGGTTTGTTACATATGTA +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYYMCIT*RFVTYV
Trigger: TACATATGTAACAAACCTGCACGTTATGCACATGTA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTCAGATCCAGTTATCTaGCAAATGGTCTCAAACATA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKSDPVI*QMVSNI
Trigger: TATGTTTGAGACCATTTGCCAGATAACTGGATCTGA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACTGATATCGTCACATaGTCCTTTAGTGACCAAAAA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTDIVT*SFSDQK
Trigger: TTTTTGGTCACTAAAGGACCATGTGACGATATCAGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATCCACTTAGTAAAATaGAAAACACTAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYIHLVK*KTLELQ
Trigger: CTGAAGCTCTAGTGTTTTCCATTTTACTAAGTGGAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCTTAACAAATCTTTGTaGCTGAGAAACCATGAGATT +
Preference number: 2 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYLNKSL*LRNHEI
Trigger: AATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 90 bp ACAAAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATaGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCTTGCTA +
Preference number: 2 (lower is better)
Translates to: TKHKSVRRNHTRKRA*SGYQNIRSLILALL
Trigger: TAGCAAGGCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 90 bp CACACACACACACACACACACAGAGTCATCTATATGAACACGTACTaGAGTTTCTTAAACATATATGAAGCACCTTCCATTTCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHRVIYMNTY*SFLNIYEAPSISLY
Trigger: ATAAAGGGAAATGGAAGGTGCTTCATATATGTTTAAGAAACTCAAGTACGTGTTCATATAGATGACTCTGTGTGTGTGTGTGTGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAGTCAAATCAAAAACTaGTTTGGTCTCAAATCCATG +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKSQIKN*FGLKSM
Trigger: CATGGATTTGAGACCAAAGCAGTTTTTGATTTGACT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAACTCACTGTTGTTGTaGACCTTTAAACAACTCTTA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKNSLLL*TFKQLL
Trigger: TAAGAGTTGTTTAAAGGTGCACAACAACAGTGAGTT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTCTATAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAFYKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTATAGAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTACATGTGCATAACGTaGAGGTTTGTTACATATGTA +
Preference number: 2 (lower is better)
Translates to: THTHRHTQSLLISSGSLKYMCIT*RFVTYV
Trigger: TACATATGTAACAAACCTGCACGTTATGCACATGTA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTATTTGAATTTTTCTaGCCTAACCTTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALFEFF*PNLVGM
Trigger: CATGCCAACAAGGTTAGGCCAGAAAAATTCAAATAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 90 bp TATTCTGTGACGATGGAACTTAATGATGTAAGAGTTAATTACCCATaGTCAAAAATCATTGCCCATCAAAGCAGTGAGACTGTGTGCTAT +
Preference number: 2 (lower is better)
Translates to: YSVTMELNDVRVNYP*SKIIAHQSSETVCY
Trigger: ATAGCACACAGTCTCACTGCTTTGATGGGCAATGATTTTTGACAATGGGTAATTAACTCTTACATCATTAAGTTCCATCGTCACAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 2 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 2 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCACACACTGGGCCTGTaGTGGGGTCAGGGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHTLGL*WGQGRG
Trigger: CCCCCTCCCCTGACCCCACAACAGGCCCAGTGTGTG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTAGTTGCTCCGTGGTaGTCAAATCTGTCTGCACAT +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTLVAPW*SNLSAH
Trigger: ATGTGCAGACAGATTTGACAACCACGGAGCAACTAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACA +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSTLWA*FSSLET
Trigger: TGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACT +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTGHGSF*APKIKT
Trigger: AGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGAAGGGACTAGAACTTaGGGAAAGTGCAACCTTGTT +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSEGTRT*GKCNLV
Trigger: AACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTTC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCATATTTTGCTAAGCTaGTGGATGAAGCCGCATGTC +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSHILLS*WMKPHV
Trigger: GACATGCGGCTTCATCCACAAGCTTAGCAAAATATG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAGACACACACAGAGTTaGCTTATAAGCTCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSRHTQS*LISSGS
Trigger: GCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACA +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSSTLWA*FSSLET
Trigger: TGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATTTTCCAGTCATTCTaGAGACTGTCAACTCTATGG +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTIFQSF*RLSTLW
Trigger: CCATAGAGTTGACAGTCTCAAGAATGACTGGAAAAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATCTCCCCTTACTCCTTaGATTTTCAGACTAATTTGG +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSPLTP*IFRLIW
Trigger: CCAAATTAGTCTGAAAATCAAAGGAGTAAGGGGAGA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAGATACGTACCAAAATaGTCTTTTGACCCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSRYVPK*SFDPLR
Trigger: CCTGAGAGGGTCAAAAGACAATTTTGGTACGTATCT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACAAAAGTACCTATGTTaGCCTAGTTCTCAGATTACA +
Preference number: 3 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTQKYLC*PSSQIT
Trigger: TGTAATCTGAGAACTAGGCAAACATAGGTACTTTTG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp TCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATaGAGACTTACAAAGGACTACCCACTAAGAATAAAA +
Preference number: 3 (lower is better)
Translates to: SMVPTLCHQPAV*RLTKDYPLRIK
Trigger: TTTTATTCTTAGTGGGTAGTCCTTTGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGAGAAAGTAGAATGCTaGGGAGGTCATATGTTTCAA +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSEKVEC*GGHMFQ
Trigger: TTGAAACATATGACCTCCCAAGCATTCTACTTTCTC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATTTTCCAGTCATTCTaGAGACTGTCAACTCTATGG +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSIFQSF*RLSTLW
Trigger: CCATAGAGTTGACAGTCTCAAGAATGACTGGAAAAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp GGAGGGATAGCATTAGGAGATATACCTAATGTTAAATaGCGAGTTAATGGGTGCAGCACACCAACATGGCAC +
Preference number: 3 (lower is better)
Translates to: GGIALGDIPNVK*RVNGCSTPTWH
Trigger: GTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTATATCTCCTAATGCTATCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTGCATACTGTATTTTTaGCTTGAAACCTGTCAGCAT +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSCILYF*LETCQH
Trigger: ATGCTGACAGGTTTCAAGCAAAAAATACAGTATGCA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATTAGTTATGTGACCTaGGACAAGTTAGTAAAACCC +
Preference number: 3 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSISYVT*DKLVKP
Trigger: GGGTTTTACTAACTTGTCCAAGGTCACATAACTAAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATGTCTAACTACCAGTTaGGTATGTTTGGGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: KLQTQVLKPSSILVHHVACLTTS*VCLGLV
Trigger: CACCAGCCCCAAACATACCAAACTGGTAGTTAGACA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCATATTTTGCTAAGCTaGTGGATGAAGCCGCATGTC +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHILLS*WMKPHV
Trigger: GACATGCGGCTTCATCCACAAGCTTAGCAAAATATG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp AAAACTGTTCAGTGGTGGTCTTCCTATTGTAACAGCTaGTTTCATGGCTATGTGGAACCATTGGTTGGACAC +
Preference number: 3 (lower is better)
Translates to: KTVQWWSSYCNS*FHGYVEPLVGH
Trigger: GTGTCCAACCAATGGTTCCACATAGCCATGAAATCAGCTGTTACAATAGGAAGACCACCACTGAACAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTaGAAGGGACTAGAACTTTGGGAAAGTGCAACCTTG +
Preference number: 3 (lower is better)
Translates to: GLGVNVMNRLMR*KGLELWESATL
Trigger: CAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGTAACTCACTGTTGTaGTGCACCTTTAAACAACTC +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGNSLL*CTFKQL
Trigger: GAGTTGTTTAAAGGTGCACAACAACAGTGAGTTACC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTAGTTGCTCCGTGGTaGTCAAATCTGTCTGCACAT +
Preference number: 3 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALVAPW*SNLSAH
Trigger: ATGTGCAGACAGATTTGACAACCACGGAGCAACTAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGACACTCTGAACAATaGAACAAGACTACGCTGAAA +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGHSEQ*NKTTLK
Trigger: TTTCAGCGTAGTCTTGTTCAATTGTTCAGAGTGTCC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACT +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGHGSF*APKIKT
Trigger: AGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTENISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTCTCTCATTCTGGCCTaGCTAGGAAATAGATCTTTG +
Preference number: 3 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELSLILA*LGNRSL
Trigger: CAAAGATCTATTTCCTAGCAAGGCCAGAATGAGAGA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACACATGACTCATCATaGCCCAAATCAATTGCCCAA +
Preference number: 3 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTHDSS*PKSIAQ
Trigger: TTGGGCAATTGATTTGGGCAATGATGAGTCATGTGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACAAACAGCAGTGGGTaGAAGGCAATGCTGTTTATA +
Preference number: 3 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATNSSG*KAMLFI
Trigger: TATAAACAGCATTGCCTTCAACCCACTGCTGTTTGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACT +
Preference number: 3 (lower is better)
Translates to: THTHRHTQSLLISSGSLKGHGSF*APKIKT
Trigger: AGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATACGAGAAAAAGAGCATaGTCTGGTTATCAGAATATC +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYTRKRA*SGYQNI
Trigger: GATATTCTGATAACCAGACAATGCTCTTTTTCTCGT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAAAAATATCCTAGTGTaGTTTGCACCACAGCATACC +
Preference number: 3 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELKNILV*FAPQHT
Trigger: GGTATGCTGTGGTGCAAACAACACTAGGATATTTTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTGTTGATGGATGTATaGTCAAGGAAAAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVLMDV*SRKKKR
Trigger: TCTCTTCTTTTTCCTTGACAATACATCCATCAACAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATTGGTAACTCACTGTaGTTGTGCACCTTTAAACAA +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYIGNSL*LCTFKQ
Trigger: TTGTTTAAAGGTGCACAACAACAGTGAGTTACCAAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGATGAGAGATAGGTTGTaGGGAATATTCAGGGTGAAT +
Preference number: 3 (lower is better)
Translates to: THTHRHTQSLLISSGSLKMRDRL*GIFRVN
Trigger: ATTCACCCTGAATATTCCCAACAACCTATCTCTCAT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCATTGCCCAAATCAATaGCCCAAATCAATTCAAACA +
Preference number: 3 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHCPNQ*PKSIQT
Trigger: TGTTTGAATTGATTTGGGCAATTGATTTGGGCAATG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGCAAGTCAATATGACTaGTTCTGTTTCAGCTATCTG +
Preference number: 3 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAASQYD*FCFSYL
Trigger: CAGATAGCTGAAACAGAACAAGTCATATTGACTTGC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp CAACACTATTGGGCACCCAGTTATTTGGTGGTACGCTaGGTGAAAATATGTAGCTTTATCTACATTACCTTG +
Preference number: 3 (lower is better)
Translates to: QHYWAPSYLVVR*VKICSFIYITL
Trigger: CAAGGTAATGTAGATAAAGCTACATATTTTCACTCAGCGTACCACCAAATAACTGGGTGCCCAATAGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp GTGAATCTAGACAGATCATATGGTAAAAATACAAACTaGACTCCTTCAGCTAAGGGGTTAATCGGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: VNLDRSYGKNTN*TPSAKGLIGQG
Trigger: ACCCTGACCGATTAACCCCTTAGCTGAAGGAGTTCAGTTTGTATTTTTACCATATGATCTGTCTAGATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp GAATATGTAAGGGGTTACAACTCATTTCAGGGAGTCTaGCTAGCTCTTGATATTACATGTCTTTGGCATACA +
Preference number: 3 (lower is better)
Translates to: EYVRGYNSFQGV*LALDITCLWHT
Trigger: TGTATGCCAAAGACATGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGAGTTGTAACCCCTTACATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp TGTCTTTTGACCCTCTCAGGGAGTCAAGTTTTGATTTaGTTGAATACAAGCAAGTCGAGCTATGGTAATTTG +
Preference number: 3 (lower is better)
Translates to: CLLTLSGSQVLI*LNTSKSSYGNL
Trigger: CAAATTACCATAGCTCGACTTGCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGAGAGGGTCAAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp AAGTGCATAGGGCAGAGGAGGCGATTCAGTTACTTCTaGTATGTTATTAAATCTCTGGTAACCACTATACAA +
Preference number: 3 (lower is better)
Translates to: KCIGQRRRFSYF*YVIKSLVTTIQ
Trigger: TTGTATAGTGGTTACCAGAGATTTAATAACATAGCAGAAGTAACTGAATCGCCTCCTCTGCCCTATGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp ACCATTGGTTGGACACATAAAATGAGAGTATGTAGATaGGAGCCCTTTGCTGCTGGCAAAGCTTTAAAAATA +
Preference number: 3 (lower is better)
Translates to: TIGWTHKMRVCR*EPFAAGKALKI
Trigger: TATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCGCATCTACATACTCTCATTTTATGTGTCCAACCAATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp CAGGGAGTCTGCCTAGCTCTTGATATTACATGTCTTTaGCATACAATTGTGTACCTTTTATCATTGACAGTG +
Preference number: 3 (lower is better)
Translates to: QGVCLALDITCL*HTIVYLLSLTV
Trigger: CACTGTCAATGATAAAAGGTACACAATTGTATGCCAAAGACATGTAATATCAAGAGCTAGGCAGACTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp AACAATTATGATAACTCTGAGCATGGAGCTCAGGAATaGGTGAAATTCTTCCCCAGAGATGTTAATGAACAG +
Preference number: 3 (lower is better)
Translates to: NNYDNSEHGAQE*VKFFPRDVNEQ
Trigger: CTGTTCATTAACATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTCCATGCTCAGAGTTATCATAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp AAAAATAACTTACGAAAGGATAGATTCCAATGTCAGTaGGTGAGATGTGCTCTAGCTAGTGTGCACGAAAGA +
Preference number: 3 (lower is better)
Translates to: KNNLRKDRFQCQ*VRCALASVHER
Trigger: TCTTTCGTGCACACTAGCTAGAGCACATCTCACCCACTGACATTGGAATCTATCCTTTCGTAAGTTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKANISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAGAGTTAGAGCTTTGTaGATTGAGATATGTGGAACT +
Preference number: 3 (lower is better)
Translates to: THTHRHTQSLLISSGSLKRVRAL*IEICGT
Trigger: AGTTCCACATATCTCAATCAACAAAGCTCTAACTCT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGGATTTATTATCACATaGGCCACAGAACACATAGAA +
Preference number: 3 (lower is better)
Translates to: THTHRHTQSLLISSGSLKGFIIT*ATEHIE
Trigger: TTCTATGTGTTCTGTGGCCAATGTGATAATAAATCC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAATGAGAAAACTACTTaGAAGACTGTGCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: KLQTQVLKPSSILVHHVANEKTT*KTVLKE
Trigger: TTCCTTCAGCACAGTCTTCAAAGTAGTTTTCTCATT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp TCCCATGAAGACAAAAGGCATGCATATAAAATTTGTTaGAACACAAAGCTGAGGAGGCATAATAAGACGTGG +
Preference number: 3 (lower is better)
Translates to: SHEDKRHAYKIC*NTKLRRHNKTW
Trigger: CCACGTCTTATTATGCCTCCTCAGCTTTGTGTTTCAACAAATTTTATATGCATGCCTTTTGTCTTCATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp TACCGAGTTTATTTTCTAAGGGTAGTGAATAACTCCTaGCAACTACTGATATCGTCACATGGTCCTTTAGTG +
Preference number: 3 (lower is better)
Translates to: YRVYFLRVVNNS*QLLISSHGPLV
Trigger: CACTAAAGGACCATGTGACGATATCAGTAGTTGTCAGGAGTTATTCACTACCCTTAGAAAATAAACTCGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp ACTATTGGGCACCCAGTTATTTGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCTACATTACCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: TIGHPVIWWYAE*KYVALSTLPWF
Trigger: AAACCAAGGTAATGTAGATAAAGCTACATATTTTCACTCAGCGTACCACCAAATAACTGGGTGCCCAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp TGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTaGTTATCAGAATATCAGATCTCTCATTCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: CQEKSYEKKSIV*LSEYQISHSGL
Trigger: AAGGCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
3UTR-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTCTCTCATTCTGGCCTaGCTAGGAAATAGATCTTTG +
Preference number: 3 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYSLILA*LGNRSL
Trigger: CAAAGATCTATTTCCTAGCAAGGCCAGAATGAGAGA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp TTACCCATTGTCAAAAATCATTGCCCATCAAAGCAGTaGGACTGTGTGCTATGTCCAGTTTTATTCATTTCT +
Preference number: 3 (lower is better)
Translates to: LPIVKNHCPSKQ*DCVLCPVLFIS
Trigger: AGAAATGAATAAAACTGGACATAGCACACAGTCTCACTGCTTTGATGGGCAATGATTTTTGACAATGGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp TACATATATCTGTTAGCTGTGAAGGAAGACAAAAATTaGCCTTTATCCTACTATCCTCCTTCTAGCTATGGC +
Preference number: 3 (lower is better)
Translates to: YIYLLAVKEDKN*PLSYYPPSSYG
Trigger: GCCATAGCTAGAAGGAGGATAGTAGGATAAAGGTCAATTTTTGTCTTCCTTCACAGCTAACAGATATATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp ACTGATATCGTCACATGGTCCTTTAGTGACCAAAAATaGACAGTTGTAAGAATGCAAGTGTTACTTGTATTG +
Preference number: 3 (lower is better)
Translates to: TDIVTWSFSDQK*TVVRMQVLLVL
Trigger: CAATACAAGTAACACTTGCATTCTTACAACTGTGCATTTTTGGTCACTAAAGGACCATGTGACGATATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR GCA 72 bp TACAGTCTTAGTTGCTCCGTGGTTGTCAAATCTGTCTaGACATTAGGATCACTTAGGAAGAATTTTAAAAGT +
Preference number: 3 (lower is better)
Translates to: YSLSCSVVVKSV*TLGSLRKNFKS
Trigger: ACTTTTAAAATTCTTCCTAAGTGATCCTAATGTGCAGACAGATTTGACAACCACGGAGCAACTAAGACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp TATTCTCTGTCAAATGTGGAGGTCATGGATCCTTCTTaGCACCTAAGATTAAAACTCATAGAATGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: YSLSNVEVMDPS*HLRLKLIECAL
Trigger: TAAAGCACATTCTATGAGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACCTCCACATTTGACAGAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp AAATTGGAGATTTGGATCATATGGGCTATGACTAAATaGGACAAGGCATACATGCTGACATTTGAAGGATTT +
Preference number: 3 (lower is better)
Translates to: KLEIWIIWAMTK*DKAYMLTFEGF
Trigger: AAATCCTTCAAATGTCAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCATATGATCCAAATCTCCAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp AGAAATACACCAATAAGCACATACCAAAGTCAATTCTaGAATGAGTTACAAAACTGTTCAGTGGTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: RNTPISTYQSQF*NELQNCSVVVF
Trigger: GAAGACCACCACTGAACAGTTTTGTAACTCATTTCAGAATTGACTTTGGTATGTGCTTATTGGTGTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp ATATTGGGATTATTGAAGCAAATTCTACCCTGGACTTaGAGTAAATGTGATGAACAGATTAATGAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: ILGLLKQILPWT*SKCDEQINEVE
Trigger: TTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTTCAATAATCCCAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp TACATCAAAACTATAATTACCTGTATTTGGGCAGAATaGTTTAGGTTATGCCAGCTATTGTGGTTAAAGCTG +
Preference number: 3 (lower is better)
Translates to: YIKTIITCIWAE*FRLCQLLWLKL
Trigger: CAGCTTTAACCACAATAGCTGGCATAACCTAAATCATTCTGCCCAAATACAGGTAATTATAGTTTTGATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR TCA 72 bp AAAATTGAGAGAAGACAGAATTTCAAGTCTGAATTATaGCTTCACTACTGTGTCGTCATTGGTAGAATAAGG +
Preference number: 3 (lower is better)
Translates to: KIERRQNFKSEL*LHYCVVIGRIR
Trigger: CCTTATTCTACCAATGACGACACAGTAGTGAAGTCATAATTCAGACTTGAAATTCTGTCTTCTCTCAATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CCA 72 bp CAGAAAATATTGGGATTATTGAAGCAAATTCTACCCTaGACTTGGAGTAAATGTGATGAACAGATTAATGAG +
Preference number: 3 (lower is better)
Translates to: QKILGLLKQILP*TWSKCDEQINE
Trigger: CTCATTAATCTGTTCATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTTCAATAATCCCAATATTTTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATATTTGGGTCTCATTaGAGGGCATGGGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTIFGSH*RAWARD
Trigger: ATCTCTGGCCCATGCCCTTCAATGAGACCCAAATAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGCTGAGGCAGGAGAATaGCGTGACCCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPAEAGE*RDPRRW
Trigger: CCACCTCCTGGGGTCACGCCATTCTCCTGCCTCAGC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGCTGAGGCAGGAGAATaGCGTGACCCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELAEAGE*RDPRRW
Trigger: CCACCTCCTGGGGTCACGCCATTCTCCTGCCTCAGC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGGAATAAGGACACTCTaGGCCCGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPGIRTL*ARRGGS
Trigger: TGAGCCACCGCGCCGGGCCCAGAGTGTCCTTATTCC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATGGGCTATGACTAAATaGGACAAGGCATACATGCTG +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTWAMTK*DKAYML
Trigger: CAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGTGGGAACTGAACATTaGGAACACATAGACACAGGA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTVGTEH*EHIDTG
Trigger: TCCTGTGTCTATGTGTTCTCAATGTTCAGTTCCCAC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATGAGAGTATGTAGATaGGAGCCCTTTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSMRVCR*EPFAAG
Trigger: GCCAGCAGCAAAGGGCTCGCATCTACATACTCTCAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGGAATAAGGACACTCTaGGCCCGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDGIRTL*ARRGGS
Trigger: TGAGCCACCGCGCCGGGCCCAGAGTGTCCTTATTCC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTTTCCAGTCATTCTTaGGACTGTCAACTCTATGGG +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTFSSHS*DCQLYG
Trigger: CCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTTTTCGGTCTATGGTaGCCACATTGTGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSFFGLW*PHCVTS
Trigger: GCTGGTGACACAATGTGGGCACCATAGACCGAAAAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATTTTGCTAAGCTTGTaGATGAAGCCGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTILLSL*MKPHVS
Trigger: AGAGACATGCGGCTTCATCCACAAGCTTAGCAAAAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGGAATAAGGACACTCTaGGCCCGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAGIRTL*ARRGGS
Trigger: TGAGCCACCGCGCCGGGCCCAGAGTGTCCTTATTCC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTGGATCATGATTATTaGCCTGTGTCCCACCCATTA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTLDHDY*PVSHPL
Trigger: TAATGGGTGGGACACAGGCCAATAATCATGATCCAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACGAGCCCTTTGCTGCTaGCAAAGCTTTAAAAATATG +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTRALCC*QSFKNM
Trigger: CATATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAAGAACTCCCAAGAATaGCACTGTAGAACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTKNSQE*HCRTFS
Trigger: AGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAGGTGGAACTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVARWNLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAAGTTCCACCT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATGCTTGGGTTTGCCATaGATCATAAATACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTCLGLP*IINTKS
Trigger: TGACTTGGTATTTATGATTCATGGCAAACCCAAGCA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAACAACAATTAGCATGTaGCATGCTCTCAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTTTISM*HALSKS
Trigger: TGATTTGCTGAGAGCATGTCACATGCTAATTGTTGT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATTGAGTCTCTATGGTTaGCTATATGCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTLSLYG*LYAVKE
Trigger: TTCCTTCACAGCATATAGTCAACCATAGAGACTCAA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATCCTATTGTAACAGCTaGTTTCATGGCTATGTGGAA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSYCNS*FHGYVE
Trigger: TTCCACATAGCCATGAAATCAGCTGTTACAATAGGA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGGCCCAAGTAATGTTTaGAGTAACCTTGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSGPSNV*SNLAWE
Trigger: TTCCCAAGCAAGGTTACTTCAAACATTACTTGGGCC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCTTCCTTTCATGACATaGATGAACTCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLPFMT*MNSSSG
Trigger: GCCACTGCTAGAGTTCATGCATGTCATGAAAGGAAG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACCCTGTCTTTTACTATaGAAACATGCAAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTPCLLL*KHASIR
Trigger: TCTGATGCTTGCATGTTTGCATAGTAAAAGACAGGG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSNRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCACACTAAGGTGTCCTaGATTACTTTAACGGACACA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSHTKVS*ITLTDT
Trigger: TGTGTCCGTTAAAGTAATTCAGGACACCTTAGTGTG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAGTTATTTTTCCTCCTaGCCTCTAATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSYFSS*PLMKML
Trigger: AAGCATCTTCATTAGAGGTCAGGAGGAAAAATAACT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATCTCTAATGTGCTGTaGTTTTCAAAGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTISNVL*FSKDVM
Trigger: CATGACATCCTTTGAAAATCACAGCACATTAGAGAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCAAACAGCAGTGGGTTaGAGGCAATGCTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSQTAVG*RQCCLY
Trigger: ATATAAACAGCATTGCCTTCAACCCACTGCTGTTTG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGGATCATATGGGCTATaGCTAAATGAGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSGSYGL*LNETRH
Trigger: ATGCCTTGTCTCATTTAGTCATAGCCCATATGATCC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAATTTTGAGTTGGAATTaGTATAGGGGAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTILSWN*YRGILG
Trigger: TCCAAGGATTCCCCTATATCAATTCCAACTCAAAAT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAGGTGGAACTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRWNLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAAGTTCCACCT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAACAAATCTTTGTGGCTaGGAAACCATGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTTNLCG*ETMRFH
Trigger: ATGAAATCTCATGGTTTCTCAGCCACAAAGATTTGT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACTGGTCTTGAGCTCCTaGTTTCAGGAGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALVLSS*FQEFLA
Trigger: GGCCAAGAACTCCTGAAATCAGGAGCTCAAGACCAG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCTGGTCTTGAGCTCCTaGTTTCAGGAGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKLVLSS*FQEFLA
Trigger: GGCCAAGAACTCCTGAAATCAGGAGCTCAAGACCAG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACAGGAAAGAAGAACTTaGTTGAGGCAAAATCATGAA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTQERRT*LRQNHE
Trigger: TTCATGATTTTGCCTCAAGCAAGTTCTTCTTTCCTG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAAGCAAATTCTACCCTaGACTTGGAGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTKQILP*TWSKCD
Trigger: ATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATCTGTGCCATACTTTTaGTACCTTCATAATAAACGG +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTSVPYF*YLHNKR
Trigger: CCGTTTATTATGAAGGTACCAAAAGTATGGCACAGA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAACAATAGCAAAGACTTaGAACCAATCCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTTIAKT*NQSKCP
Trigger: TGGACATTTGGATTGGTTCCAAGTCTTTGCTATTGT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATTTTGCTAAGCTTGTaGATGAAGCCGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSILLSL*MKPHVS
Trigger: AGAGACATGCGGCTTCATCCACAAGCTTAGCAAAAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATACAAAACTGTTCAGTaGTGGTCTTCCTATTGTAAC +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTYKTVQ*WSSYCN
Trigger: GTTACAATAGGAAGACCACCACTGAACAGTTTTGTA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAACTAAAATATGGTTTTaGGACACCTGTTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTTKIWF*DTCWEH
Trigger: ATGTTCCCAACAGGTGTCCCAAAACCATATTTTAGT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAAATGTCTGTACGAATaGGCTAACTACTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSKCLYE*ANYYRP
Trigger: AGGCCTATAGTAGTTAGCTCATTCGTACAGACATTT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTGTATGGCAATTAAATaGCTCAGCCATTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSCMAIK*LSHSCL
Trigger: GAGACATGAATGGCTGAGTCATTTAATTGCCATACA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGAGTTAGAGCTTTGTTaGTTGAGATATGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSELELC*LRYVEL
Trigger: CAGTTCCACATATCTCAATCAACAAAGCTCTAACTC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGAGCTCAGGAATGGGTaGAATTCTTCCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKELRNG*NSSPEM
Trigger: CATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGAGCTCAGGAATGGGTaGAATTCTTCCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELELRNG*NSSPEM
Trigger: CATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAGGTGGAACTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKRWNLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAAGTTCCACCT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTGCCCATCAAAGCAGTaGGACTGTGTGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKCPSKQ*DCVLCP
Trigger: TGGACATAGCACACAGTCTCACTGCTTTGATGGGCA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTGGTCTTGAGCTCCTaGTTTCAGGAGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLVLSS*FQEFLA
Trigger: GGCCAAGAACTCCTGAAATCAGGAGCTCAAGACCAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTGGTCAGGCTGGTCTTaGGCTCCTGATTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGWSGWS*APDFRS
Trigger: ACTCCTGAAATCAGGAGCTCAAGACCAGCCTGACCA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGGTCAGGCTGGTCTTaGGCTCCTGATTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAWSGWS*APDFRS
Trigger: ACTCCTGAAATCAGGAGCTCAAGACCAGCCTGACCA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAGGGCTGAGAGAGCCTaGGTACACTATACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRAERA*VHYTEA
Trigger: AGCCTCTGTATAGTGTACTCAGGCTCTCTCAGCCCT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCAGAATCAGGGCTGTaGTTTCTGGGTGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDAESGL*FLGESE
Trigger: CTCTGACTCACCCAGAAAGCACAGCCCTGATTCTGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAACTCACTGTTGTTGTaGACCTTTAAACAACTCTTA +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTNSLLL*TFKQLL
Trigger: TAAGAGTTGTTTAAAGGTGCACAACAACAGTGAGTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGTTTCGTTTCCTTATTaGCCTAGATGCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSVSFPY*PRCLFS
Trigger: AGAGAAAAGGCATCTAGGGCAATAAGGAAACGAAAC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACACCAGCCAGCCGTATaGAGACTTACAAAGGACTAC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEHQPAV*RLTKDY
Trigger: GTAGTCCTTTGTAAGTCTGCATACGGCTGGCTGGTG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCACCAGCCAGCCGTATaGAGACTTACAAAGGACTAC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHHQPAV*RLTKDY
Trigger: GTAGTCCTTTGTAAGTCTGCATACGGCTGGCTGGTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTTTTTCGGTCTATGGTaGCCACATTGTGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYFFGLW*PHCVTS
Trigger: GCTGGTGACACAATGTGGGCACCATAGACCGAAAAA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATGAGAGTATGTAGATaGGAGCCCTTTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEMRVCR*EPFAAG
Trigger: GCCAGCAGCAAAGGGCTCGCATCTACATACTCTCAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCCCTGTCTTTTACTATaGAAACATGCAAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSPCLLL*KHASIR
Trigger: TCTGATGCTTGCATGTTTGCATAGTAAAAGACAGGG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGACGTTTTTCCTTCCTaGTTCAGCCCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHDVFPS*FSPSVT
Trigger: GGTGACTGAAGGGCTGAAGCAGGAAGGAAAAACGTC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTGTTCCCCAGGGATaGCAATCTGGTGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASVPQG*QSGVPV
Trigger: CACAGGAACACCAGATTGCCATCCCTGGGGAACAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCATGGAGCTCAGGAATaGGTGAAATTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHGAQE*VKFFPR
Trigger: TCTGGGGAAGAATTTCACCCATTCCTGAGCTCCATG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTGGATAGAAAGAGATaGCCCAGGATACAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELDRKR*PRIQRA
Trigger: TGCCCTCTGTATCCTGGGCCATCTCTTTCTATCCAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCTGGATAGAAAGAGATaGCCCAGGATACAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPLDRKR*PRIQRA
Trigger: TGCCCTCTGTATCCTGGGCCATCTCTTTCTATCCAG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAGGAAATTAATGGTTTaGGAGGTTGAGCAACAGACT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSRKLMV*EVEQQT
Trigger: AGTCTGTTGCTCAACCTCCCAAACCATTAATTTCCT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAGTAGAGGTTTTCAATTaGTTTACAGGAAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTVEVFN*FTGSLI
Trigger: AATCAGACTTCCTGTAAACCAATTGAAAACCTCTAC...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATTAGCTCAGCTTGGTaGCAGGTGCCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHISSAW*QVPVVP
Trigger: TGGAACTACAGGCACCTGCCACCAAGCTGAGCTAAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVARITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTERITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATGTCCTTCCCAAGCATaGGACGTTCCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTECPSQA*DVPRFH
Trigger: ATGGAATCTTGGAACGTCTCATGCTTGGGAAGGACA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTGTCCTTCCCAAGCATaGGACGTTCCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHCPSQA*DVPRFH
Trigger: ATGGAATCTTGGAACGTCTCATGCTTGGGAAGGACA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCTGTGCTTTCTGGGTaGGTCAGAGTGGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAAVLSG*VRVDKA
Trigger: AGCTTTATCCACTCTGACTCACCCAGAAAGCACAGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCTGTGCTTTCTGGGTaGGTCAGAGTGGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDAVLSG*VRVDKA
Trigger: AGCTTTATCCACTCTGACTCACCCAGAAAGCACAGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGATGTCCATAACTGCTaGAAAGGCTCCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVADVHNC*KGSPKE
Trigger: CTCCTTAGGGGAGCCTTTTCAGCAGTTATGGACATC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATAGTCAGAATTGAATaGGAGATAGGTTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSIVRIE*EIGCWE
Trigger: TTCCCAACAACCTATCTCTCATTCAATTCTGACTAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGTCAATAGTCAGAATTaGATGAGAGATAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSVNSQN*MRDRLL
Trigger: CAACAACCTATCTCTCATTCAATTCTGACTATTGAC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTATTTGGTGGTACGCTaGGTGAAAATATGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSYLVVR*VKICSF
Trigger: AAAGCTACATATTTTCACTCAGCGTACCACCAAATA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGAGCTCAGGAATGGGTaGAATTCTTCCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGELRNG*NSSPEM
Trigger: CATCTCTGGGGAAGAATTTCACCCATTCCTGAGCTC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCTCGGCTGTTTCCTCTaGCAGTTCTGTGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLGCFL*QFCGKE
Trigger: TTCTTTACCACAGAACTGTCAGAGGAAACAGCCGAG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGGTCAGGCTGGTCTTaGGCTCCTGATTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKWSGWS*APDFRS
Trigger: ACTCCTGAAATCAGGAGCTCAAGACCAGCCTGACCA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGCCCAAGTAATGTTTaGAGTAACCTTGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGPSNV*SNLAWE
Trigger: TTCCCAAGCAAGGTTACTTCAAACATTACTTGGGCC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAGGGCTGAGAGAGCCTaGGTACACTATACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKARAERA*VHYTEA
Trigger: AGCCTCTGTATAGTGTACTCAGGCTCTCTCAGCCCT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAAGCACAGTGAGGGCTaGGAGAGCCTGAGTACACTA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAKHSEG*ESLSTL
Trigger: TAGTGTACTCAGGCTCTCTCAGCCCTCACTGTGCTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGGTGATTTCGACTCCTaGGCCAGTGCTCCAAATGAT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDGDFDS*ASAPND
Trigger: ATCATTTGGAGCACTGGCTCAGGAGTCGAAATCACC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGGTGATTTCGACTCCTaGGCCAGTGCTCCAAATGAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAGDFDS*ASAPND
Trigger: ATCATTTGGAGCACTGGCTCAGGAGTCGAAATCACC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTTTGGTCTCAAATTTaGAACCAGGTGAGCACACCC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELWSQI*NQVSTP
Trigger: GGGTGTGCTCACCTGGTTGCAAATTTGAGACCAAAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCTTTGGTCTCAAATTTaGAACCAGGTGAGCACACCC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLWSQI*NQVSTP
Trigger: GGGTGTGCTCACCTGGTTGCAAATTTGAGACCAAAG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCAGAATCAGGGCTGTaGTTTCTGGGTGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAAESGL*FLGESE
Trigger: CTCTGACTCACCCAGAAAGCACAGCCCTGATTCTGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCACATATGTATACATGTaGCATGTTGGTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSTYVYM*HVGVLH
Trigger: ATGCAGAACACCAACATGGCACATGTATACATATGT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCATGGGCCAGAGATATaGATACAGAAATTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHGPEI*IQKLSL
Trigger: GAGGGACAATTTCTGTATGCATATCTCTGGCCCATG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATGAGAGTATGTAGATaGGAGCCCTTTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAMRVCR*EPFAAG
Trigger: GCCAGCAGCAAAGGGCTCGCATCTACATACTCTCAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGACGTTTTTCCTTCCTaGTTCAGCCCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDDVFPS*FSPSVT
Trigger: GGTGACTGAAGGGCTGAAGCAGGAAGGAAAAACGTC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATACCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIPCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGGTAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATACCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEIPCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGGTAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTCTTCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSSCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGAAGA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000552808.6
ENST00000636211.1
ENST00000646655.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAACATAGAGGATCCTTaGATGATTGACCAACTTATC +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSNIEDP*MIDQLI
Trigger: GATAAGTTGGTCAATCATCCAAGGATCCTCTATGTT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTGGATAGAAAGAGATaGCCCAGGATACAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLDRKR*PRIQRA
Trigger: TGCCCTCTGTATCCTGGGCCATCTCTTTCTATCCAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATACAGAGTCTGCCATATaGAGAAGTAGAATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYTESAI*RSRMRG
Trigger: GCCTCTCATTCTACTTCTCCATATGGCAGACTCTGT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCGCATTATCCTCTCCTTaGAAATATCTTTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSALSSP*KYLSKW
Trigger: CCACTTTGAAAGATATTTCCAAGGAGAGGATAATGC...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGATTTCAGGAGTTCTTaGCCTCTCAAAGTACCGGGA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKDFRSS*PLKVPG
Trigger: TCCCGGTACTTTGAGAGGCCAAGAACTCCTGAAATC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGATTTCAGGAGTTCTTaGCCTCTCAAAGTACCGGGA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPDFRSS*PLKVPG
Trigger: TCCCGGTACTTTGAGAGGCCAAGAACTCCTGAAATC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp TTCAGTAATTTTATTTTTCGGTCTATGGTGCCCACATaGTGTCACCAGCCAGCCGTATGCAGACTTACAAAG +
Preference number: 4 (lower is better)
Translates to: FSNFIFRSMVPT*CHQPAVCRLTK
Trigger: CTTTGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAAAATAAAATTACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVARITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTGTCCTTCCCAAGCATaGGACGTTCCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDCPSQA*DVPRFH
Trigger: ATGGAATCTTGGAACGTCTCATGCTTGGGAAGGACA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGTCCTTCCCAAGCATaGGACGTTCCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACPSQA*DVPRFH
Trigger: ATGGAATCTTGGAACGTCTCATGCTTGGGAAGGACA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCGCAAAGCCATGACTTaGTGGAGAGTTTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRKAMT*WRVSFP
Trigger: AGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTGCCCGCAAAGCCATaGCTTGATGGAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALPAKP*LDGEFH
Trigger: ATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACTGGCAATATCCTCTaGTCTATTGCCCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTGNIL*SIARKA
Trigger: GGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACTGGCAATATCCTCTaGTCTATTGCCCGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATGNIL*SIARKA
Trigger: GGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGAATGTAACAGCAGCTaGGAAGCTTCAGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEECNSS*EASEKT
Trigger: GGTTTTCTCTGAAGCTTCTCAGCTGCTGTTACATTC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGAATGTAACAGCAGCTaGGAAGCTTCAGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHECNSS*EASEKT
Trigger: GGTTTTCTCTGAAGCTTCTCAGCTGCTGTTACATTC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAGTCTGCCTAGCTCTTaGTATTACATGTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSLPSS*YYMSLA
Trigger: TGCCAAAGACATGTAATATCAAGAGCTAGGCAGACT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGATGTCCATAACTGCTaGAAAGGCTCCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKADVHNC*KGSPKE
Trigger: CTCCTTAGGGGAGCCTTTTCAGCAGTTATGGACATC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGATGTCCATAACTGCTaGAAAGGCTCCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKDVHNC*KGSPKE
Trigger: CTCCTTAGGGGAGCCTTTTCAGCAGTTATGGACATC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATACTCCTGACAACTACTaGTATCGTCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHTPDNY*YRHMVL
Trigger: AAGGACCATGTGACGATATCAGTAGTTGTCAGGAGT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACTCCTGACAACTACTaGTATCGTCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETPDNY*YRHMVL
Trigger: AAGGACCATGTGACGATATCAGTAGTTGTCAGGAGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATGGGCTATGACTAAATaGGACAAGGCATACATGCTG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAWAMTK*DKAYML
Trigger: CAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGTGGGAACTGAACATTaGGAACACATAGACACAGGA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEVGTEH*EHIDTG
Trigger: TCCTGTGTCTATGTGTTCTCAATGTTCAGTTCCCAC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCTCATAGGTGGGAACTaGACATTGAGAACACATAGA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYLIGGN*TLRTHR
Trigger: TCTATGTGTTCTCAATGTTCAGTTCCCACCTATGAG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACTCGGCTGTTTCCTCTaGCAGTTCTGTGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALGCFL*QFCGKE
Trigger: TTCTTTACCACAGAACTGTCAGAGGAAACAGCCGAG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATGTAAATGGGGTGGGTaGTGGGAGAGAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTECKWGG*WERENK
Trigger: TTTGTTTTCTCTCTCCCATCACCCACCCCATTTACA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTGTAAATGGGGTGGGTaGTGGGAGAGAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPCKWGG*WERENK
Trigger: TTTGTTTTCTCTCTCCCATCACCCACCCCATTTACA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGCCCATCAAAGCAGTaGGACTGTGTGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKCPSKQ*DCVLCP
Trigger: TGGACATAGCACACAGTCTCACTGCTTTGATGGGCA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTGCCCATCAAAGCAGTaGGACTGTGTGCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKACPSKQ*DCVLCP
Trigger: TGGACATAGCACACAGTCTCACTGCTTTGATGGGCA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAATGGTTTGGGAGGTTaGGCAACAGACTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKNGLGG*ATDFES
Trigger: ACTCTCAAAGTCTGTTGCTCAACCTCCCAAACCATT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAATGGTTTGGGAGGTTaGGCAACAGACTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPNGLGG*ATDFES
Trigger: ACTCTCAAAGTCTGTTGCTCAACCTCCCAAACCATT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAATGGTTTGGGAGGTTaGGCAACAGACTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHNGLGG*ATDFES
Trigger: ACTCTCAAAGTCTGTTGCTCAACCTCCCAAACCATT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGGCCCAAGTAATGTTTaGAGTAACCTTGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELGPSNV*SNLAWE
Trigger: TTCCCAAGCAAGGTTACTTCAAACATTACTTGGGCC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAGCCCTTCAGTCACCTaGACTTTAGGTCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSPSVT*TLGLLF
Trigger: AAATAGGAGACCTAAAGTTCAGGTGACTGAAGGGCT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAGCACAGTGAGGGCTaGGAGAGCCTGAGTACACTA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKHSEG*ESLSTL
Trigger: TAGTGTACTCAGGCTCTCTCAGCCCTCACTGTGCTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGGTGATTTCGACTCCTaGGCCAGTGCTCCAAATGAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKGDFDS*ASAPND
Trigger: ATCATTTGGAGCACTGGCTCAGGAGTCGAAATCACC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGGCAGAGGTTGCTGTaGGCTGTGAGGAACAACCTT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRQRLL*AVRNNL
Trigger: AAGGTTGTTCCTCACAGCTCACAGCAACCTCTGCCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTTTGGTCTCAAATTTaGAACCAGGTGAGCACACCC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLWSQI*NQVSTP
Trigger: GGGTGTGCTCACCTGGTTGCAAATTTGAGACCAAAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCAAAGATCTCTAATGTaGTGTGATTTTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSQRSLM*CDFQRM
Trigger: CATCCTTTGAAAATCACAGCACATTAGAGATCTTTG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACCTTATTGCCCTAGATaGCTTTTCTCTGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEPYCPR*LFSGPR
Trigger: TCTAGGTCCAGAGAAAAGGCATCTAGGGCAATAAGG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCCTTATTGCCCTAGATaGCTTTTCTCTGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELPYCPR*LFSGPR
Trigger: TCTAGGTCCAGAGAAAAGGCATCTAGGGCAATAAGG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTACATGTGCATAACGTaGAGGTTTGTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSYMCIT*RFVTYV
Trigger: TACATATGTAACAAACCTGCACGTTATGCACATGTA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCACCAGCCAGCCGTATaGAGACTTACAAAGGACTAC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAHQPAV*RLTKDY
Trigger: GTAGTCCTTTGTAAGTCTGCATACGGCTGGCTGGTG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCTTCTCAGGAGCCCCTaGAATTTCAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPLLRSP*NFKPWN
Trigger: ATTCCAAGGTTTGAAATTGCAGGGGCTCCTGAGAAG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCTTCTCAGGAGCCCCTaGAATTTCAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELLLRSP*NFKPWN
Trigger: ATTCCAAGGTTTGAAATTGCAGGGGCTCCTGAGAAG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCTTCCTTTCATGACATaGATGAACTCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKLPFMT*MNSSSG
Trigger: GCCACTGCTAGAGTTCATGCATGTCATGAAAGGAAG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACATGGGCCAGAGATATaGATACAGAAATTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAHGPEI*IQKLSL
Trigger: GAGGGACAATTTCTGTATGCATATCTCTGGCCCATG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACAAGGCCAAGGATCTTaGCCCTCATTCTATAATGAG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAQGQGS*PSFYNE
Trigger: CTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCAAGGCCAAGGATCTTaGCCCTCATTCTATAATGAG +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKQGQGS*PSFYNE
Trigger: CTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATGCGAGCCCTTTGCTaGTGGCAAAGCTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYMRALC*WQSFKN
Trigger: ATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCGCAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTCTTCCTTCCCATTaGTTCTGCTCCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASLPSH*FCSSFI
Trigger: GATGAAGGAGGAGCAGAAGCAATGGGAAGGAAGAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTCTTTGTAAAGGTGTaGCAGCTAGGTAGCGATAGG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFFVKV*QLGSDR
Trigger: CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCTTTGTAAAGGTGTaGCAGCTAGGTAGCGATAGG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFFVKV*QLGSDR
Trigger: CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTGTTCCCCAGGGATaGCAATCTGGTGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSVPQG*QSGVPV
Trigger: CACAGGAACACCAGATTGCCATCCCTGGGGAACAGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACTGGGTGAGTCAGAGTaGATAAAGCTTCAACCTTGC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALGESE*IKLQPC
Trigger: GCAAGGTTGAAGCTTTATCCACTCTGACTCACCCAG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTGGGTGAGTCAGAGTaGATAAAGCTTCAACCTTGC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLGESE*IKLQPC
Trigger: GCAAGGTTGAAGCTTTATCCACTCTGACTCACCCAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTTCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASSCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGAAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000552808.6
ENST00000636211.1
ENST00000646655.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCAGTTATCTGGCAAATaGTCTCAAACATACATTTCA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSQLSGK*SQTYIS
Trigger: TGAAATGTATGTTTGAGACCATTTGCCAGATAACTG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACAGAGTCTGCCATATaGAGAAGTAGAATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATESAI*RSRMRG
Trigger: GCCTCTCATTCTACTTCTCCATATGGCAGACTCTGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCCTTAACAAATCTTTGTaGCTGAGAAACCATGAGATT +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSLNKSL*LRNHEI
Trigger: AATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAG...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCTACATTGAGTCTCTATaGTTGACTATATGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSYIESL*LTICCE
Trigger: TTCACAGCATATAGTCAACCATAGAGACTCAATGTA...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAGCCATCAAGCATACTaGTTCACCATGTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPSHQAY*FTMLQT
Trigger: AGTCTGCAACATGGTGAACCAGTATGCTTGATGGCT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp TTCCAGTCATTCTTGAGACTGTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACACTGAACTTTTTACAG +
Preference number: 4 (lower is better)
Translates to: FQSFLRLSTLWA*FSSLETLNFLQ
Trigger: CTGTAAAAAGTTCAGTGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGACAGTCTCAAGAATGACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTENRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHNRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGTCCTTCCCAAGCATaGGACGTTCCAAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKCPSQA*DVPRFH
Trigger: ATGGAATCTTGGAACGTCTCATGCTTGGGAAGGACA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTGCCCGCAAAGCCATaGCTTGATGGAGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLPAKP*LDGEFH
Trigger: ATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCTGCAGCTCTTGTTTaGAAGACAGATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASAALV*KTDPQQ
Trigger: CTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAGTCTGCCTAGCTCTTaGTATTACATGTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESLPSS*YYMSLA
Trigger: TGCCAAAGACATGTAATATCAAGAGCTAGGCAGACT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGGATCCTTGGATGATTaGCCAACTTATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELGSLDD*PTYPNT
Trigger: TGTGTTTGGATAAGTTGGTCAATCATCCAAGGATCC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTTGTTTCTATGCCTCTaGGACAAGATTACTAGACCC +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELLFLCL*DKITRP
Trigger: GGGTCTAGTAATCTTGTCTCAGAGGCATAGAAACAA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATGCCATTACTGTGTTaGTGGATGTATTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYMPLLC*WMYCQG
Trigger: TCCTTGACAATACATCCATCAACACAGTAATGGCAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTAGTGAATAACTCCTaGCAACTACTGATATCGTCA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVVNNS*QLLISS
Trigger: TGACGATATCAGTAGTTGTCAGGAGTTATTCACTAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTTTGTAGCAAACACATaGCTCATCATTGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYFVANT*LIIAQI
Trigger: GATTTGGGCAATGATGAGTCATGTGTTTGCTACAAA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATACAGTGAAATGCACATaGAATCTTCACACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYTVKCT*NLHTVS
Trigger: AGACACTGTGTGAAGATTTCATGTGCATTTCACTGT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACAAACAGCAGTGGGTTaGAGGCAATGCTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAQTAVG*RQCCLY
Trigger: ATATAAACAGCATTGCCTTCAACCCACTGCTGTTTG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGGATCATATGGGCTATaGCTAAATGAGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHGSYGL*LNETRH
Trigger: ATGCCTTGTCTCATTTAGTCATAGCCCATATGATCC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTGGGAACTGAACATTaGGAACACATAGACACAGGA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVGTEH*EHIDTG
Trigger: TCCTGTGTCTATGTGTTCTCAATGTTCAGTTCCCAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTCTGTCCAAGTCTCTaGGTCATGTACAGAACTCAA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAFCPSL*VMYRTQ
Trigger: TTGAGTTCTGTACATGACTCAGAGACTTGGACAGAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTTCTGTCCAAGTCTCTaGGTCATGTACAGAACTCAA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELFCPSL*VMYRTQ
Trigger: TTGAGTTCTGTACATGACTCAGAGACTTGGACAGAA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGTAAATGGGGTGGGTaGTGGGAGAGAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACKWGG*WERENK
Trigger: TTTGTTTTCTCTCTCCCATCACCCACCCCATTTACA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTTTTCCAGTCATTCTTaGGACTGTCAACTCTATGGG +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKFSSHS*DCQLYG
Trigger: CCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATTATACAGACAAAGATaGCAAGGGCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALYRQR*QGPKRK
Trigger: CTTCCTTTTCGGCCCTTGTCATCTTTGTCTGTATAA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGGTAAAAATACAAACTaGACTCCTTCAGCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPGKNTN*TPSAKG
Trigger: CCCCTTAGCTGAAGGAGTTCAGTTTGTATTTTTACC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATATTTGGGTCTCATTaGAGGGCATGGGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKIFGSH*RAWARD
Trigger: ATCTCTGGCCCATGCCCTTCAATGAGACCCAAATAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGCTAACATGGGAATCTaGTTCTCAATAACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAANMGI*FSITSV
Trigger: CACCGAAGTTATTGAGAATCAGATTCCCATGTTAGC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGATATTTTATCCAGATaGGGCTTTGGAGACATCCAG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEDILSR*GFGDIQ
Trigger: CTGGATGTCTCCAAAGCCTCATCTGGATAAAATATC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATCTCTTTGGGAAACTaGAGATTTTCCCGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHISLGN*RFSRSE
Trigger: CTCACTTCGGGAAAATCTTCAGTTTCCCAAAGAGAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTTGCCACACTCCTCTaGACAGTCTTTCTTACAACA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFATLL*TVFLTT
Trigger: TGTTGTAAGAAAGACTGTGCAGAGGAGTGTGGCAAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTTGCCACACTCCTCTaGACAGTCTTTCTTACAACA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFATLL*TVFLTT
Trigger: TGTTGTAAGAAAGACTGTGCAGAGGAGTGTGGCAAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTATCCTCTGATCTATTaGCCGCAAAGCCATGACTTG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDYPLIY*PQSHDL
Trigger: CAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKSTAAL*IQVIWL
Trigger: CAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTCATTTCAGGGAGTCTaGCTAGCTCTTGATATTACA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSFQGV*LALDIT
Trigger: TGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAACATCCAACTTCACTaGTACCCTCAGCAATGTTTC +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVANIQLH*YPQQCF
Trigger: GAAACATTGCTGAGGGTAGCAGTGAAGTTGGATGTT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTTTTCGGTCTATGGTaGCCACATTGTGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFFGLW*PHCVTS
Trigger: GCTGGTGACACAATGTGGGCACCATAGACCGAAAAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCTTCCTTTCATGACATaGATGAACTCTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGLPFMT*MNSSSG
Trigger: GCCACTGCTAGAGTTCATGCATGTCATGAAAGGAAG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACAAGGCCAAGGATCTTaGCCCTCATTCTATAATGAG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAQGQGS*PSFYNE
Trigger: CTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATGCGAGCCCTTTGCTaGTGGCAAAGCTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELMRALC*WQSFKN
Trigger: ATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCGCAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGACGTTTTTCCTTCCTaGTTCAGCCCTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRDVFPS*FSPSVT
Trigger: GGTGACTGAAGGGCTGAAGCAGGAAGGAAAAACGTC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCTCTTCCTTCCCATTaGTTCTGCTCCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASLPSH*FCSSFI
Trigger: GATGAAGGAGGAGCAGAAGCAATGGGAAGGAAGAGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCAGAATCAGGGCTGTaGTTTCTGGGTGAGTATACA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAAESGL*FLGEYT
Trigger: TGTATACTCACCCAGAAAGCACAGCCCTGATTCTGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTCTTTGTAAAGGTGTaGCAGCTAGGTAGCGATAGG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFFVKV*QLGSDR
Trigger: CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATACCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKIPCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGGTAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGAGAGTTTCATTCCCTaGGCTCAGTTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKESFIP*AQFSRR
Trigger: TCTTCTGGAGAACTGAGCCCAGGGAATGAAACTCTC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAACAGATTAATGAGGTaGAAGGGACTAGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYNRLMR*KGLELW
Trigger: CCAAAGTTCTAGTCCCTTCCACCTCATTAATCTGTT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTCAGATCAACACTATTaGGCACCCAGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELSDQHY*APSYLV
Trigger: CACCAAATAACTGGGTGCCCAATAGTGTTGATCTGA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGTTTACAAACAGCAGTaGGTTGAAGGCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKVYKQQ*VEGNAV
Trigger: AACAGCATTGCCTTCAACCCACTGCTGTTTGTAAAC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTGGATCATGATTATTaGCCTGTGTCCCACCCATTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLDHDY*PVSHPL
Trigger: TAATGGGTGGGACACAGGCCAATAATCATGATCCAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTTATTTTTCGGTCTATaGTGCCCACATTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPLFFGL*CPHCVT
Trigger: GGTGACACAATGTGGGCACCATAGACCGAAAAATAA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGATTTCAGGAGTTCTTaGCCTCTCAAAGTACCGGGA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKDFRSS*PLKVPG
Trigger: TCCCGGTACTTTGAGAGGCCAAGAACTCCTGAAATC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCGAGCCCTTTGCTGCTaGCAAAGCTTTAAAAATATG +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKRALCC*QSFKNM
Trigger: CATATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGATTTCATGGCTATGTaGAACCATTGGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPDFMAM*NHWLDT
Trigger: TGTGTCCAACCAATGGTTCCACATAGCCATGAAATC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGATTTCATGGCTATGTaGAACCATTGGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKDFMAM*NHWLDT
Trigger: TGTGTCCAACCAATGGTTCCACATAGCCATGAAATC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGCATACAAGTGATCTaGCTGATCTCCAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACIQVI*LISSSH
Trigger: ATGGGAACTGGAGATCAGCCAGATCACTTGTATGCA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCAGGGCTGTGCTTTCTaGGTGAGTATACACAAAATT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHQGCAF*VSIHKI
Trigger: AATTTTGTGTATACTCACCCAGAAAGCACAGCCCTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAGAACTCCCAAGAATaGCACTGTAGAACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKNSQE*HCRTFS
Trigger: AGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTAGGTAGCGATAGGTaGCATTTATGGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLGSDR*HLWLLR
Trigger: TCTCAGGAGCCATAAATGTCACCTATCGCTACCTAG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVANRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCGGATCACATTTTTCTaGGCCAACAGACCACGGAAA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRITFF*ANRPRK
Trigger: TTTCCGTGGTCTGTTGGCTCAGAAAAATGTGATCCG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHTSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAATTTGCAACCAGGTaGGCACACCCTGATAATATA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKFATR*AHPDNI
Trigger: TATATTATCAGGGTGTGCTCACCTGGTTGCAAATTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATTTCTTGGAATGTaGCAGCTCTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAIFLGM*QLSRSR
Trigger: CCGGGATCTAGAGAGCTGTCACATTCCAAGAAATAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCGCAAAGCCATGACTTaGTGGAGAGTTTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRKAMT*WRVSFP
Trigger: AGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTGCAGCTCTTGTTTaGAAGACAGATCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSAALV*KTDPQQ
Trigger: CTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAAATGTCTGTACGAATaGGCTAACTACTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAKCLYE*ANYYRP
Trigger: AGGCCTATAGTAGTTAGCTCATTCGTACAGACATTT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGGATCCTTGGATGATTaGCCAACTTATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAGSLDD*PTYPNT
Trigger: TGTGTTTGGATAAGTTGGTCAATCATCCAAGGATCC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGGATCCTTGGATGATTaGCCAACTTATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDGSLDD*PTYPNT
Trigger: TGTGTTTGGATAAGTTGGTCAATCATCCAAGGATCC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTGTATGGCAATTAAATaGCTCAGCCATTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPCMAIK*LSHSCL
Trigger: GAGACATGAATGGCTGAGTCATTTAATTGCCATACA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATGCCATTACTGTGTTaGTGGATGTATTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELMPLLC*WMYCQG
Trigger: TCCTTGACAATACATCCATCAACACAGTAATGGCAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATATCTCTAATGTGCTGTaGTTTTCAAAGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYISNVL*FSKDVM
Trigger: CATGACATCCTTTGAAAATCACAGCACATTAGAGAT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAGAAAAATTCTGTTTTaGGAGAGATGGCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKRKILF*ERWPPL
Trigger: TAGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATGTATTTGGGCAGAATaGTTTAGGTTATGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVACIWAE*FRLCQL
Trigger: TAGCTGGCATAACCTAAATCATTCTGCCCAAATACA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTGTATTTGGGCAGAATaGTTTAGGTTATGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHCIWAE*FRLCQL
Trigger: TAGCTGGCATAACCTAAATCATTCTGCCCAAATACA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGAGTTAGAGCTTTGTTaGTTGAGATATGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPELELC*LRYVEL
Trigger: CAGTTCCACATATCTCAATCAACAAAGCTCTAACTC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACTCCTGACAACTACTaGTATCGTCACATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATPDNY*YRHMVL
Trigger: AAGGACCATGTGACGATATCAGTAGTTGTCAGGAGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHWWYAE*KYVALS
Trigger: AGATAAAGCTACATATTTTCACTCAGCGTACCACCA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACAGTGAAATGCACATaGAATCTTCACACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATVKCT*NLHTVS
Trigger: AGACACTGTGTGAAGATTTCATGTGCATTTCACTGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAACTTTGGGGTTTACTaGTGTTTTCCAACATCCGAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHNFGVY*CFPTSE
Trigger: TTCGGATGTTGGAAAACATCAGTAAACCCCAAAGTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCAAACAGCAGTGGGTTaGAGGCAATGCTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDQTAVG*RQCCLY
Trigger: ATATAAACAGCATTGCCTTCAACCCACTGCTGTTTG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTTTAGAAATACCATTTaGCCCAGCCATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELFRNTI*PSHPIT
Trigger: AGTAATGGGATGGCTGGGTCAAATGGTATTTCTAAA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTTAGAAATACCATTTaGCCCAGCCATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFRNTI*PSHPIT
Trigger: AGTAATGGGATGGCTGGGTCAAATGGTATTTCTAAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGTGGCTGAGAAACCATaGGATTTCATTCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAVAEKP*DFILAC
Trigger: ACATGCCAGAATGAAATCTCATGGTTTCTCAGCCAC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCAGATTTATAAAGTATaGCCTATAGCATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYQIYKV*PIASNS
Trigger: GGAGTTGGATGCTATAGGTCATACTTTATAAATCTG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTTCAAGTCTGAATTATaGCTTCACTACTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPFKSEL*LHYCVV
Trigger: GACGACACAGTAGTGAAGTCATAATTCAGACTTGAA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCAAGTCTGAATTATaGCTTCACTACTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFKSEL*LHYCVV
Trigger: GACGACACAGTAGTGAAGTCATAATTCAGACTTGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTTATACAGACAAAGATaGCAAGGGCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGLYRQR*QGPKRK
Trigger: CTTCCTTTTCGGCCCTTGTCATCTTTGTCTGTATAA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTATACAGACAAAGATaGCAAGGGCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALYRQR*QGPKRK
Trigger: CTTCCTTTTCGGCCCTTGTCATCTTTGTCTGTATAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTCTGACCCAGCCACTTaGATAAATAAGTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPSDPAT*INKLCC
Trigger: ACAACACAACTTATTTATTCAAGTGGCTGGGTCAGA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTGAGTCTCTATGGTTaGCTATATGCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELSLYG*LYAVKE
Trigger: TTCCTTCACAGCATATAGTCAACCATAGAGACTCAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTCCTATTGTAACAGCTaGTTTCATGGCTATGTGGAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSYCNS*FHGYVE
Trigger: TTCCACATAGCCATGAAATCAGCTGTTACAATAGGA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCTTGGGAAGCTTTGTTaGATTGACACAAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGLGKLC*IDTSTE
Trigger: TTCTGTGCTTGTGTCAATTCAACAAAGCTTCCCAAG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTTGGGAAGCTTTGTTaGATTGACACAAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLGKLC*IDTSTE
Trigger: TTCTGTGCTTGTGTCAATTCAACAAAGCTTCCCAAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGCTAACATGGGAATCTaGTTCTCAATAACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGANMGI*FSITSV
Trigger: CACCGAAGTTATTGAGAATCAGATTCCCATGTTAGC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGATATTTTATCCAGATaGGGCTTTGGAGACATCCAG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDDILSR*GFGDIQ
Trigger: CTGGATGTCTCCAAAGCCTCATCTGGATAAAATATC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAGCCCTTCAGTCACCTaGACTTTAGGTCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASPSVT*TLGLLF
Trigger: AAATAGGAGACCTAAAGTTCAGGTGACTGAAGGGCT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTCTTAAACTCTCACTaGTCGTATACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFLNSH*SYTPLP
Trigger: AGGAAGTGGAGTATACGATCAGTGAGAGTTTAAGAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTTGAATCCCTGAGCTaGAATATTTTCCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELESLS*NIFLGS
Trigger: AGAACCAAGGAAAATATTTCAGCTCAGGGATTCAAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTCCTGTTTCTGTCTTTaGGTGGGAATTTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSCFCL*VGIYFL
Trigger: CAAGAAGTAAATTCCCACTCAAAGACAGAAACAGGA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACACTATACAGAGGCTaGGTTAGTCCTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETLYRG*VSPVSF
Trigger: AAAAGAAACAGGACTAACTCAGCCTCTGTATAGTGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCGCTGTCATAATCTGTaGTGTACAGAAACCGTTGAT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGRCHNL*CTETVD
Trigger: ATCAACGGTTTCTGTACAGCACAGATTATGACAGCG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTTGCCACACTCCTCTaGACAGTCTTTCTTACAACA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFATLL*TVFLTT
Trigger: TGTTGTAAGAAAGACTGTGCAGAGGAGTGTGGCAAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATATCCTCTGATCTATTaGCCGCAAAGCCATGACTTG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKYPLIY*PQSHDL
Trigger: CAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTGCTATAGCGTTTTCTaGAGCTCTTGTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHCYSVF*SSCLKD
Trigger: GTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATGCTATAGCGTTTTCTaGAGCTCTTGTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTECYSVF*SSCLKD
Trigger: GTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATAAAGCTTCAACCTTaGTATAGCGTTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIKLQP*YSVFCS
Trigger: GCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAACATCCAACTTCACTaGTACCCTCAGCAATGTTTC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVANIQLH*YPQQCF
Trigger: GAAACATTGCTGAGGGTAGCAGTGAAGTTGGATGTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAACATCCAACTTCACTaGTACCCTCAGCAATGTTTC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDNIQLH*YPQQCF
Trigger: GAAACATTGCTGAGGGTAGCAGTGAAGTTGGATGTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTTTACACATCTGGATaGTCAGAAAGGCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDFYTSG*SERPPY
Trigger: GTAAGGAGGCCTTTCTGAGCATCCAGATGTGTAAAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGTACAACTTTTCCTCTaGATCCTTTTACCTCATGTT +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYVQLFL*ILLPHV
Trigger: AACATGAGGTAAAAGGATGCAGAGGAAAAGTTGTAC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGTTTCGTTTCCTTATTaGCCTAGATGCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELVSFPY*PRCLFS
Trigger: AGAGAAAAGGCATCTAGGGCAATAAGGAAACGAAAC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAGCAGTGAGACTGTGTaGTATGTCCAGTTTTATTCA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELSSETV*YVQFYS
Trigger: TGAATAAAACTGGACATAGCACACAGTCTCACTGCT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAGCAGTGAGACTGTGTaGTATGTCCAGTTTTATTCA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESSETV*YVQFYS
Trigger: TGAATAAAACTGGACATAGCACACAGTCTCACTGCT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACAGTGGCATAATCTCTaGTTACCAAAACCTCCGACT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKQWHNL*LPKPPT
Trigger: AGTCGGAGGTTTTGGTAAGCAGAGATTATGCCACTG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCAGTGGCATAATCTCTaGTTACCAAAACCTCCGACT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAQWHNL*LPKPPT
Trigger: AGTCGGAGGTTTTGGTAAGCAGAGATTATGCCACTG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCATGCGAGCCCTTTGCTaGTGGCAAAGCTTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGMRALC*WQSFKN
Trigger: ATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCGCAT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAACTTCCATGTCACATaGTACTGCGGCTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVANFHVT*YCGFSS
Trigger: ACTAGAAAAGCCGCAGTAGCATGTGACATGGAAGTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGTTCTTTCAGTTTCTTaGCTAAAATGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEVLSVS*LKCGHS
Trigger: GCTGTGACCACATTTTAGGCAAGAAACTGAAAGAAC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTCTTCCTTCCCATTaGTTCTGCTCCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSLPSH*FCSSFI
Trigger: GATGAAGGAGGAGCAGAAGCAATGGGAAGGAAGAGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTCTGTGTAATATCCTaGACCATGGCATCACGCCAG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRFCVIS*TMASRQ
Trigger: CTGGCGTGATGCCATGGTCCAGGATATTACACAGAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATACCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRIPCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGGTAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGAGAGTTTCATTCCCTaGGCTCAGTTCTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRESFIP*AQFSRR
Trigger: TCTTCTGGAGAACTGAGCCCAGGGAATGAAACTCTC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCTTCTTGCATCTTCTaGATCCCTTTGCCACACTCC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSSCIF*IPLPHS
Trigger: GGAGTGTGGCAAAGGGATCCAGAAGATGCAAGAAGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000552808.6
ENST00000636211.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAACATAGAGGATCCTTaGATGATTGACCAACTTATC +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYNIEDP*MIDQLI
Trigger: GATAAGTTGGTCAATCATCCAAGGATCCTCTATGTT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCATTCCCAGAGAATACTaGCCCAGTAAGAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPIPREY*PSKKWN
Trigger: ATTCCATTTCTTACTGGGCCAGTATTCTCTGGGAAT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTGGTAATGCAGAACTaGGTGTCAAAATCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLVMQN*VSKSSL
Trigger: CAGACTTGATTTTGACACCCAGTTCTGCATTACCAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAAGGGACTAGAACTTTaGGAAAGTGCAACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPKGLEL*ESATLL
Trigger: TAACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAAGGGACTAGAACTTTaGGAAAGTGCAACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKKGLEL*ESATLL
Trigger: TAACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTCAGATCCAGTTATCTaGCAAATGGTCTCAAACATA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSDPVI*QMVSNI
Trigger: TATGTTTGAGACCATTTGCCAGATAACTGGATCTGA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCATGGAGCTCAGGAATaGGTGAAATTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHGAQE*VKFFPR
Trigger: TCTGGGGAAGAATTTCACCCATTCCTGAGCTCCATG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCATGGAGCTCAGGAATaGGTGAAATTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYHGAQE*VKFFPR
Trigger: TCTGGGGAAGAATTTCACCCATTCCTGAGCTCCATG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATTCTCTGTCAAATGTaGAGGTCATGGATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEILCQM*RSWILL
Trigger: AAGAAGGATCCATGACCTCCACATTTGACAGAGAAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATTCTCTGTCAAATGTaGAGGTCATGGATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHILCQM*RSWILL
Trigger: AAGAAGGATCCATGACCTCCACATTTGACAGAGAAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACAGAGTCTGCCATATaGAGAAGTAGAATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTESAI*RSRMRG
Trigger: GCCTCTCATTCTACTTCTCCATATGGCAGACTCTGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTATTTTTCGGTCTATaGTGCCCACATTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALFFGL*CPHCVT
Trigger: GGTGACACAATGTGGGCACCATAGACCGAAAAATAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCGAGCCCTTTGCTGCTaGCAAAGCTTTAAAAATATG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGRALCC*QSFKNM
Trigger: CATATTTTTAAAGCTTTGCCAGCAGCAAAGGGCTCG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTGTGGAACCATTGGTTaGACACATAAAATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYCGTIG*THKMRV
Trigger: TACTCTCATTTTATGTGTCCAACCAATGGTTCCACA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGATTTCATGGCTATGTaGAACCATTGGTTGGACACA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDDFMAM*NHWLDT
Trigger: TGTGTCCAACCAATGGTTCCACATAGCCATGAAATC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAAAACTGTTCAGTGGTaGTCTTCCTATTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPKTVQW*SSYCNS
Trigger: GCTGTTACAATAGGAAGACCACCACTGAACAGTTTT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAAAACTGTTCAGTGGTaGTCTTCCTATTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKKTVQW*SSYCNS
Trigger: GCTGTTACAATAGGAAGACCACCACTGAACAGTTTT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGCATACAAGTGATCTaGCTGATCTCCAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKCIQVI*LISSSH
Trigger: ATGGGAACTGGAGATCAGCCAGATCACTTGTATGCA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACTTCAGGATCTCTTTaGGAAACTGAAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETSGSL*ETEDFP
Trigger: GGGAAAATCTTCAGTTTCCCAAAGAGATCCTGAAGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
3UTR CAA 72 bp CAAAATTGTCTTTTGACCCTCTCAGGGAGTCAAGTTTaGATTTGCTTGAATACAAGCAAGTCGAGCTATGGT +
Preference number: 4 (lower is better)
Translates to: QNCLLTLSGSQV*ICLNTSKSSYG
Trigger: ACCATAGCTCGACTTGCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGAGAGGGTCAAAAGACAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAGAACTCCCAAGAATaGCACTGTAGAACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAKNSQE*HCRTFS
Trigger: AGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAAGAACTCCCAAGAATaGCACTGTAGAACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDKNSQE*HCRTFS
Trigger: AGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKANRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKNRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 9 nt, total homopolymer stretches 22 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVATSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAAATTTGCAACCAGGTaGGCACACCCTGATAATATA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDKFATR*AHPDNI
Trigger: TATATTATCAGGGTGTGCTCACCTGGTTGCAAATTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAGTTATTTTTCCTCCTaGCCTCTAATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSYFSS*PLMKML
Trigger: AAGCATCTTCATTAGAGGTCAGGAGGAAAAATAACT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTGTTTCTATGCCTCTaGGACAAGATTACTAGACCC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLFLCL*DKITRP
Trigger: GGGTCTAGTAATCTTGTCTCAGAGGCATAGAAACAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCATGCCATTACTGTGTTaGTGGATGTATTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGMPLLC*WMYCQG
Trigger: TCCTTGACAATACATCCATCAACACAGTAATGGCAT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAAAATCAAGTCTGTATaGACCTTCTGTTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELKIKSV*TFCFVS
Trigger: GGAGACAAAACAGAAGGTTCATACAGACTTGATTTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCACAGATGTAGAAACTaGGTTTCAAGAAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPHRCRN*VSRRLS
Trigger: ACTTAACCTTCTTGAAACTCAGTTTCTACATCTGTG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGTTAGCTTTCAATTATaGACACTCTCAGCCTCTATT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELVSFQL*TLSASI
Trigger: AATAGAGGCTGAGAGTGTTCATAATTGAAAGCTAAC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGTAGTGAATAACTCCTaGCAACTACTGATATCGTCA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAVVNNS*QLLISS
Trigger: TGACGATATCAGTAGTTGTCAGGAGTTATTCACTAC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGATAGTCAGAATTGAATaGGAGATAGGTTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKIVRIE*EIGCWE
Trigger: TTCCCAACAACCTATCTCTCATTCAATTCTGACTAT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCATAGTCAGAATTGAATaGGAGATAGGTTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPIVRIE*EIGCWE
Trigger: TTCCCAACAACCTATCTCTCATTCAATTCTGACTAT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGTCAATAGTCAGAATTaGATGAGAGATAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPVNSQN*MRDRLL
Trigger: CAACAACCTATCTCTCATTCAATTCTGACTATTGAC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTTGTAGCAAACACATaGCTCATCATTGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDFVANT*LIIAQI
Trigger: GATTTGGGCAATGATGAGTCATGTGTTTGCTACAAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDWWYAE*KYVALS
Trigger: AGATAAAGCTACATATTTTCACTCAGCGTACCACCA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTATTTGGTGGTACGCTaGGTGAAAATATGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKYLVVR*VKICSF
Trigger: AAAGCTACATATTTTCACTCAGCGTACCACCAAATA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAACTTTGGGGTTTACTaGTGTTTTCCAACATCCGAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVANFGVY*CFPTSE
Trigger: TTCGGATGTTGGAAAACATCAGTAAACCCCAAAGTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTGGGCTATGACTAAATaGGACAAGGCATACATGCTG +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYWAMTK*DKAYML
Trigger: CAGCATGTATGCCTTGTCTCATTTAGTCATAGCCCA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTCTTTAGCCAGAAATaGCTGAGAAATTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELFSQK*LRNFEL
Trigger: CAACTCAAAATTTCTCAGTCATTTCTGGCTAAAGAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTTAGAAATACCATTTaGCCCAGCCATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFRNTI*PSHPIT
Trigger: AGTAATGGGATGGCTGGGTCAAATGGTATTTCTAAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTCTGTCCAAGTCTCTaGGTCATGTACAGAACTCAA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAFCPSL*VMYRTQ
Trigger: TTGAGTTCTGTACATGACTCAGAGACTTGGACAGAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTGGCTGAGAAACCATaGGATTTCATTCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVAEKP*DFILAC
Trigger: ACATGCCAGAATGAAATCTCATGGTTTCTCAGCCAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTGCTTGGGTTTGCCATaGATCATAAATACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGCLGLP*IINTKS
Trigger: TGACTTGGTATTTATGATTCATGGCAAACCCAAGCA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTGCTTGGGTTTGCCATaGATCATAAATACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDCLGLP*IINTKS
Trigger: TGACTTGGTATTTATGATTCATGGCAAACCCAAGCA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTACATATCTTTCGTTTTaGGATCTGCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELTYLSF*DLQNKV
Trigger: GACTTTGTTCTGCAGATCTCAAAACGAAAGATATGT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACATATCTTTCGTTTTaGGATCTGCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTYLSF*DLQNKV
Trigger: GACTTTGTTCTGCAGATCTCAAAACGAAAGATATGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTTTCCAGTCATTCTTaGGACTGTCAACTCTATGGG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFSSHS*DCQLYG
Trigger: CCCATAGAGTTGACAGTCTCAAGAATGACTGGAAAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCAGATTTATAAAGTATaGCCTATAGCATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHQIYKV*PIASNS
Trigger: GGAGTTGGATGCTATAGGTCATACTTTATAAATCTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTATTTGGATATAACGTaGATGGGCCCATACCATAAA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELYLDIT*MGPYHK
Trigger: TTTATGGTATGGGCCCATTCACGTTATATCCAAATA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTATTTGGATATAACGTaGATGGGCCCATACCATAAA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKYLDIT*MGPYHK
Trigger: TTTATGGTATGGGCCCATTCACGTTATATCCAAATA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCACAACAATTAGCATGTaGCATGCTCTCAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGTTISM*HALSKS
Trigger: TGATTTGCTGAGAGCATGTCACATGCTAATTGTTGT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTGCACGGACTACATTaGTTAGAGTCTAATTTTTGG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLHGLH*LESNFW
Trigger: CCAAAAATTAGACTCTAATCAATGTAGTCCGTGCAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGAATTGAATTGGATTTaGGGAGGAAAACCCATATTC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPELNWI*GGKPIF
Trigger: GAATATGGGTTTTCCTCCTCAAATCCAATTCAATTC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGTTGACTATATGCTGTaGAGGAAGGACATAAATACA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAVDYML*RKDINT
Trigger: TGTATTTATGTCCTTCCTTCACAGCATATAGTCAAC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGTTGACTATATGCTGTaGAGGAAGGACATAAATACA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPVDYML*RKDINT
Trigger: TGTATTTATGTCCTTCCTTCACAGCATATAGTCAAC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTGAGTCTCTATGGTTaGCTATATGCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLSLYG*LYAVKE
Trigger: TTCCTTCACAGCATATAGTCAACCATAGAGACTCAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAAGTCATATTATTTGTaGAAGACCAAGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAKSYYL*KTKAKD
Trigger: ATCCTTGGCCTTGGTCTTTCACAAATAATATGACTT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCTAACATGGGAATCTaGTTCTCAATAACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAANMGI*FSITSV
Trigger: CACCGAAGTTATTGAGAATCAGATTCCCATGTTAGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATCCAGATAGGTGCTTaGTGTTCTTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDIQIGA*CSFSFL
Trigger: CAAGAAACTGAAAGAACATCAAGCACCTATCTGGAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATCCAGATAGGTGCTTaGTGTTCTTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAIQIGA*CSFSFL
Trigger: CAAGAAACTGAAAGAACATCAAGCACCTATCTGGAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAGCCCTTCAGTCACCTaGACTTTAGGTCTCCTATTT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSPSVT*TLGLLF
Trigger: AAATAGGAGACCTAAAGTTCAGGTGACTGAAGGGCT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTCTTTGGGAAACTaGAGATTTTCCCGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAISLGN*RFSRSE
Trigger: CTCACTTCGGGAAAATCTTCAGTTTCCCAAAGAGAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACTTGAATCCCTGAGCTaGAATATTTTCCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALESLS*NIFLGS
Trigger: AGAACCAAGGAAAATATTTCAGCTCAGGGATTCAAG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACGCTGTCATAATCTGTaGTGTACAGAAACCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKRCHNL*CTETVD
Trigger: ATCAACGGTTTCTGTACAGCACAGATTATGACAGCG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCGCTGTCATAATCTGTaGTGTACAGAAACCGTTGAT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKARCHNL*CTETVD
Trigger: ATCAACGGTTTCTGTACAGCACAGATTATGACAGCG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATTCCAAGATTCCATCTaGTTAAGAAAGACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAFQDSI*LRKTLS
Trigger: TGACAGCGTCTTTCTTAAGCAGATGGAATCTTGGAA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTCCAAGATTCCATCTaGTTAAGAAAGACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDFQDSI*LRKTLS
Trigger: TGACAGCGTCTTTCTTAAGCAGATGGAATCTTGGAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTTGCCACACTCCTCTaGACAGTCTTTCTTACAACA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFATLL*TVFLTT
Trigger: TGTTGTAAGAAAGACTGTGCAGAGGAGTGTGGCAAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTTGCCACACTCCTCTaGACAGTCTTTCTTACAACA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAFATLL*TVFLTT
Trigger: TGTTGTAAGAAAGACTGTGCAGAGGAGTGTGGCAAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCTTCAGAGAAAACCTaGCCGATAACAATAATCCAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAASEKT*PITIIH
Trigger: ATGGATTATTGTTATCGGGCAGGTTTTCTCTGAAGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATAAAGCTTCAACCTTaGTATAGCGTTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAIKLQP*YSVFCS
Trigger: GCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGCCATTCATGTCTCATaGCAGTCTTTTTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPAIHVS*QSFSIV
Trigger: AACAATTGAAAAAGACTGGCATGAGACATGAATGGC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTTTACACATCTGGATaGTCAGAAAGGCCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFYTSG*SERPPY
Trigger: GTAAGGAGGCCTTTCTGAGCATCCAGATGTGTAAAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCAGGAAAGAAGAACTTaGTTGAGGCAAAATCATGAA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPQERRT*LRQNHE
Trigger: TTCATGATTTTGCCTCAAGCAAGTTCTTCTTTCCTG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCCTTATTGCCCTAGATaGCTTTTCTCTGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRPYCPR*LFSGPR
Trigger: TCTAGGTCCAGAGAAAAGGCATCTAGGGCAATAAGG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGTTGTCAAATCTGTCTaGACATTAGGATCACTTAGG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGVVKSV*TLGSLR
Trigger: CCTAAGTGATCCTAATGTGCAGACAGATTTGACAAC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTTGTCAAATCTGTCTaGACATTAGGATCACTTAGG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVVKSV*TLGSLR
Trigger: CCTAAGTGATCCTAATGTGCAGACAGATTTGACAAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTTCTATAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYFYKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTATAGAA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCCATGTTGGTGTTCTaGATCTTAAGAGAAGACTAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAAMLVF*ILREDY
Trigger: ATAGTCTTCTCTTAAGATGCAGAACACCAACATGGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACATATGTATACATGTaGCATGTTGGTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTYVYM*HVGVLH
Trigger: ATGCAGAACACCAACATGGCACATGTATACATATGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAGTTTGGTAAATCTTTaGTTTACAGGGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSLVNL*FTGLQV
Trigger: AACTTGAAGCCCTGTAAAGCAAAGATTTACCAAACT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCAGTGGCATAATCTCTaGTTACCAAAACCTCCGACT +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYQWHNL*LPKPPT
Trigger: AGTCGGAGGTTTTGGTAAGCAGAGATTATGCCACTG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCATGGGCCAGAGATATaGATACAGAAATTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHGPEI*IQKLSL
Trigger: GAGGGACAATTTCTGTATGCATATCTCTGGCCCATG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCCCTGTCTTTTACTATaGAAACATGCAAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGPCLLL*KHASIR
Trigger: TCTGATGCTTGCATGTTTGCATAGTAAAAGACAGGG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAACTTCCATGTCACATaGTACTGCGGCTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKANFHVT*YCGFSS
Trigger: ACTAGAAAAGCCGCAGTAGCATGTGACATGGAAGTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCTTTGTAAAGGTGTaGCAGCTAGGTAGCGATAGG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFFVKV*QLGSDR
Trigger: CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTCTTTGTAAAGGTGTaGCAGCTAGGTAGCGATAGG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRFFVKV*QLGSDR
Trigger: CCTATCGCTACCTAGCTGCCACACCTTTACAAAGAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCACTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVALPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCAAACACATTCATGTTaGTGTACAGACTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYQTHSC*CTDLQG
Trigger: CCCCTGCAAGTCTGTACACCAACATGAATGTGTTTG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAACATAGAGGATCCTTaGATGATTGACCAACTTATC +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPNIEDP*MIDQLI
Trigger: GATAAGTTGGTCAATCATCCAAGGATCCTCTATGTT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCTGGTAATGCAGAACTaGGTGTCAAAATCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALVMQN*VSKSSL
Trigger: CAGACTTGATTTTGACACCCAGTTCTGCATTACCAG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAAGGGACTAGAACTTTaGGAAAGTGCAACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGKGLEL*ESATLL
Trigger: TAACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATTCTACCCTGGACTTaGAGTAAATGTGATGAACAG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDILPWT*SKCDEQ
Trigger: CTGTTCATCACATTTACTCCAAGTCCAGGGTAGAAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTCAGATCCAGTTATCTaGCAAATGGTCTCAAACATA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELSDPVI*QMVSNI
Trigger: TATGTTTGAGACCATTTGCCAGATAACTGGATCTGA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATCAGATCCAGTTATCTaGCAAATGGTCTCAAACATA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVASDPVI*QMVSNI
Trigger: TATGTTTGAGACCATTTGCCAGATAACTGGATCTGA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCCTACTTTAAGGAGATaGCTACTTAGGGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPPTLRR*LLRVLF
Trigger: AAAAAGTACCCTAAGTAGCCATCTCCTTAAAGTAGG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTACTGATATCGTCACATaGTCCTTTAGTGACCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELTDIVT*SFSDQK
Trigger: TTTTTGGTCACTAAAGGACCATGTGACGATATCAGT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATCAGATCAACACTATTaGGCACCCAGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKSDQHY*APSYLV
Trigger: CACCAAATAACTGGGTGCCCAATAGTGTTGATCTGA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCAGATCAACACTATTaGGCACCCAGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASDQHY*APSYLV
Trigger: CACCAAATAACTGGGTGCCCAATAGTGTTGATCTGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTGGTATGTTTGGGGCTaGTGTTATGAAAGACTATTA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELWYVWG*CYERLL
Trigger: TAATAGTCTTTCATAACACCAGCCCCAAACATACCA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTGGTATGTTTGGGGCTaGTGTTATGAAAGACTATTA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPWYVWG*CYERLL
Trigger: TAATAGTCTTTCATAACACCAGCCCCAAACATACCA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTCAGGAGGCTTGGATTaGCAGCTATTAAATACAATT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELSGGLD*QLLNTI
Trigger: AATTGTATTTAATAGCTGCCAATCCAAGCCTCCTGA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGCATTATCCTCTCCTTaGAAATATCTTTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELALSSP*KYLSKW
Trigger: CCACTTTGAAAGATATTTCCAAGGAGAGGATAATGC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTGGATCATGATTATTaGCCTGTGTCCCACCCATTA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALDHDY*PVSHPL
Trigger: TAATGGGTGGGACACAGGCCAATAATCATGATCCAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTATTTTTCGGTCTATaGTGCCCACATTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALFFGL*CPHCVT
Trigger: GGTGACACAATGTGGGCACCATAGACCGAAAAATAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTGTGGAACCATTGGTTaGACACATAAAATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHCGTIG*THKMRV
Trigger: TACTCTCATTTTATGTGTCCAACCAATGGTTCCACA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTTTGGGACACCTGTTaGGAACATTTACAGATCATT +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFWDTC*EHLQII
Trigger: AATGATCTGTAAATGTTCCCAACAGGTGTCCCAAAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCACTAAAATATGGTTTTaGGACACCTGTTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPTKIWF*DTCWEH
Trigger: ATGTTCCCAACAGGTGTCCCAAAACCATATTTTAGT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGCCATCAAGCATACTaGTTCACCATGTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSHQAY*FTMLQT
Trigger: AGTCTGCAACATGGTGAACCAGTATGCTTGATGGCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTTCTCCACAAATATTaGCTAAAAGCTTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELLHKY*LKALVL
Trigger: GAGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTGAAATATTTTCCTTaGTTCTTTGTGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELKYFP*FFVRQL
Trigger: GAGTTGCCTCACAAAGAACCAAGGAAAATATTTCAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
3UTR CAA 72 bp CTATTCTCTGTCAAATGTGGAGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACTCATAGAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFSVKCGGHGSF*APKIKTHRMCF
Trigger: AAAGCACATTCTATGAGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACCTCCACATTTGACAGAGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAAGAACTCCCAAGAATaGCACTGTAGAACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKKNSQE*HCRTFS
Trigger: AGAAAACGTTCTACAGTGTCATTCTTGGGAGTTCTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTAAAGTCTGCTAGGTaGACCACCACTGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLKSAR*TTTEIS
Trigger: GGAAATTTCAGTGGTGGTTCACCTAGCAGACTTTAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRNRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAACAGACCACGGAAATaGGTCAATAGCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYNRPRK*VNSQSQ
Trigger: TTGTGATTGGCTATTGACTCATTTCCGTGGTCTGTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAAAACATCTCCTGTTaGAGGTGGTTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKNISC*RWFPPK
Trigger: TTTTGGGGGAAACCACCTTCAACAGGAGATGTTTTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCTTACAACAAATCTaGCCATGTCCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFLQQI*PCPSQA
Trigger: TGCTTGGGAAGGACATGGTCAGATTTGTTGTAAGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAAATGTCTGTACGAATaGGCTAACTACTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAKCLYE*ANYYRP
Trigger: AGGCCTATAGTAGTTAGCTCATTCGTACAGACATTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCACACTAAGGTGTCCTaGATTACTTTAACGGACACA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHTKVS*ITLTDT
Trigger: TGTGTCCGTTAAAGTAATTCAGGACACCTTAGTGTG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATAGTCTGCCTAGCTCTTaGTATTACATGTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYSLPSS*YYMSLA
Trigger: TGCCAAAGACATGTAATATCAAGAGCTAGGCAGACT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAAAATCAAGTCTGTATaGACCTTCTGTTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGKIKSV*TFCFVS
Trigger: GGAGACAAAACAGAAGGTTCATACAGACTTGATTTT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACACAGATGTAGAAACTaGGTTTCAAGAAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAHRCRN*VSRRLS
Trigger: ACTTAACCTTCTTGAAACTCAGTTTCTACATCTGTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTCTCTGGACAAAATATaGAAAGGTAGGCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGSLDKI*KGRLNN
Trigger: GTTATTCAGCCTACCTTTTCATATTTTGTCCAGAGA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATCTCTAATGTGCTGTaGTTTTCAAAGGATGTCATG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDISNVL*FSKDVM
Trigger: CATGACATCCTTTGAAAATCACAGCACATTAGAGAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAGAAAAATTCTGTTTTaGGAGAGATGGCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKRKILF*ERWPPL
Trigger: TAGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTGTATTTGGGCAGAATaGTTTAGGTTATGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKACIWAE*FRLCQL
Trigger: TAGCTGGCATAACCTAAATCATTCTGCCCAAATACA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGTCAATAGTCAGAATTaGATGAGAGATAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGVNSQN*MRDRLL
Trigger: CAACAACCTATCTCTCATTCAATTCTGACTATTGAC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGGTGGTACGCTGAGTaGAAATATGTAGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKWWYAE*KYVALS
Trigger: AGATAAAGCTACATATTTTCACTCAGCGTACCACCA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATTGCTCCTAACACATaGGTGGCTAAAATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKIAPNT*VAKIAN
Trigger: GTTTGCAATTTTAGCCACTCATGTGTTAGGAGCAAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACAGTGAAATGCACATaGAATCTTCACACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATVKCT*NLHTVS
Trigger: AGACACTGTGTGAAGATTTCATGTGCATTTCACTGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGGATCATATGGGCTATaGCTAAATGAGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYGSYGL*LNETRH
Trigger: ATGCCTTGTCTCATTTAGTCATAGCCCATATGATCC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCTCTTTAGCCAGAAATaGCTGAGAAATTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGLFSQK*LRNFEL
Trigger: CAACTCAAAATTTCTCAGTCATTTCTGGCTAAAGAG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCTCATAGGTGGGAACTaGACATTGAGAACACATAGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLIGGN*TLRTHR
Trigger: TCTATGTGTTCTCAATGTTCAGTTCCCACCTATGAG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCACATATCTTTCGTTTTaGGATCTGCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGTYLSF*DLQNKV
Trigger: GACTTTGTTCTGCAGATCTCAAAACGAAAGATATGT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACAACAATTAGCATGTaGCATGCTCTCAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTTISM*HALSKS
Trigger: TGATTTGCTGAGAGCATGTCACATGCTAATTGTTGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTGCACGGACTACATTaGTTAGAGTCTAATTTTTGG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLHGLH*LESNFW
Trigger: CCAAAAATTAGACTCTAATCAATGTAGTCCGTGCAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATCTGACCCAGCCACTTaGATAAATAAGTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKSDPAT*INKLCC
Trigger: ACAACACAACTTATTTATTCAAGTGGCTGGGTCAGA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAGTCATATTATTTGTaGAAGACCAAGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAKSYYL*KTKAKD
Trigger: ATCCTTGGCCTTGGTCTTTCACAAATAATATGACTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCTTGGGAAGCTTTGTTaGATTGACACAAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYLGKLC*IDTSTE
Trigger: TTCTGTGCTTGTGTCAATTCAACAAAGCTTCCCAAG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGATATTTTATCCAGATaGGGCTTTGGAGACATCCAG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRDILSR*GFGDIQ
Trigger: CTGGATGTCTCCAAAGCCTCATCTGGATAAAATATC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATCTCTTTGGGAAACTaGAGATTTTCCCGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRISLGN*RFSRSE
Trigger: CTCACTTCGGGAAAATCTTCAGTTTCCCAAAGAGAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTCTTAAACTCTCACTaGTCGTATACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAFLNSH*SYTPLP
Trigger: AGGAAGTGGAGTATACGATCAGTGAGAGTTTAAGAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTCCTTGGTTCTTTGTaGGGCAACTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFLGSL*GNSVLF
Trigger: AAATAGAACAGAGTTGCCTCACAAAGAACCAAGGAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTACTTCTTGAATCCCTaGGCTGAAATATTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDYFLNP*AEIFSL
Trigger: CAAGGAAAATATTTCAGCTCAGGGATTCAAGAAGTA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACACTATACAGAGGCTaGGTTAGTCCTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTLYRG*VSPVSF
Trigger: AAAAGAAACAGGACTAACTCAGCCTCTGTATAGTGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCGCTGTCATAATCTGTaGTGTACAGAAACCGTTGAT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRCHNL*CTETVD
Trigger: ATCAACGGTTTCTGTACAGCACAGATTATGACAGCG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCGCTGTCATAATCTGTaGTGTACAGAAACCGTTGAT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRCHNL*CTETVD
Trigger: ATCAACGGTTTCTGTACAGCACAGATTATGACAGCG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTCCAAGATTCCATCTaGTTAAGAAAGACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFQDSI*LRKTLS
Trigger: TGACAGCGTCTTTCTTAAGCAGATGGAATCTTGGAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGCTTCAGAGAAAACCTaGCCGATAACAATAATCCAT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKASEKT*PITIIH
Trigger: ATGGATTATTGTTATCGGGCAGGTTTTCTCTGAAGC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAAAGATTCTGAAGACTaGATTTCTGAGCTTAAGGTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHKDSED*ISELKV
Trigger: TACCTTAAGCTCAGAAATGCAGTCTTCAGAATCTTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAAAGATTCTGAAGACTaGATTTCTGAGCTTAAGGTA +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEKDSED*ISELKV
Trigger: TACCTTAAGCTCAGAAATGCAGTCTTCAGAATCTTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCAAAGATCTCTAATGTaGTGTGATTTTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPQRSLM*CDFQRM
Trigger: CATCCTTTGAAAATCACAGCACATTAGAGATCTTTG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAACTCACTGTTGTTGTaGACCTTTAAACAACTCTTA +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELNSLLL*TFKQLL
Trigger: TAAGAGTTGTTTAAAGGTGCACAACAACAGTGAGTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGTACAACTTTTCCTCTaGATCCTTTTACCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAVQLFL*ILLPHV
Trigger: AACATGAGGTAAAAGGATGCAGAGGAAAAGTTGTAC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTACAACTTTTCCTCTaGATCCTTTTACCTCATGTT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVQLFL*ILLPHV
Trigger: AACATGAGGTAAAAGGATGCAGAGGAAAAGTTGTAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATGATCGGTTTAGATTaGTTTAACTTGAAGGACACT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEMIGLD*FNLKDT
Trigger: AGTGTCCTTCAAGTTAAAGCAATCTAAACCGATCAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGTTTCGTTTCCTTATTaGCCTAGATGCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAVSFPY*PRCLFS
Trigger: AGAGAAAAGGCATCTAGGGCAATAAGGAAACGAAAC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCTATAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFYKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTATAGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTACATGTGCATAACGTaGAGGTTTGTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHYMCIT*RFVTYV
Trigger: TACATATGTAACAAACCTGCACGTTATGCACATGTA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAGTTTGGTAAATCTTTaGTTTACAGGGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESLVNL*FTGLQV
Trigger: AACTTGAAGCCCTGTAAAGCAAAGATTTACCAAACT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGAGTTTGGTAAATCTTTaGTTTACAGGGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKSLVNL*FTGLQV
Trigger: AACTTGAAGCCCTGTAAAGCAAAGATTTACCAAACT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAACTTCCATGTCACATaGTACTGCGGCTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRNFHVT*YCGFSS
Trigger: ACTAGAAAAGCCGCAGTAGCATGTGACATGGAAGTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGTTCTTTCAGTTTCTTaGCTAAAATGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKVLSVS*LKCGHS
Trigger: GCTGTGACCACATTTTAGGCAAGAAACTGAAAGAAC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGTTCTTTCAGTTTCTTaGCTAAAATGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAVLSVS*LKCGHS
Trigger: GCTGTGACCACATTTTAGGCAAGAAACTGAAAGAAC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAGACATCCAGATAGGTaGTTGATGTTCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVARHPDR*LMFFQF
Trigger: AAACTGAAAGAACATCAAGCACCTATCTGGATGTCT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAGACATCCAGATAGGTaGTTGATGTTCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRHPDR*LMFFQF
Trigger: AAACTGAAAGAACATCAAGCACCTATCTGGATGTCT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVALPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCACATTTTTAGGTGTCTaGCAAGTATCCTCTAAATCA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPTFLGV*QVSSKS
Trigger: TGATTTAGAGGATACTTGCCAGACACCTAAAAATGT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAACAGATTAATGAGGTaGAAGGGACTAGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKNRLMR*KGLELW
Trigger: CCAAAGTTCTAGTCCCTTCCACCTCATTAATCTGTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTACCCTGGACTTaGAGTAAATGTGATGAACAG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAILPWT*SKCDEQ
Trigger: CTGTTCATCACATTTACTCCAAGTCCAGGGTAGAAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAAGCAAATTCTACCCTaGACTTGGAGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGKQILP*TWSKCD
Trigger: ATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCAGTTATCTGGCAAATaGTCTCAAACATACATTTCA +
Preference number: 4 (lower is better)
Translates to: THTHRHTQSLLISSGSLKQLSGK*SQTYIS
Trigger: TGAAATGTATGTTTGAGACCATTTGCCAGATAACTG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCCTACTTTAAGGAGATaGCTACTTAGGGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDPTLRR*LLRVLF
Trigger: AAAAAGTACCCTAAGTAGCCATCTCCTTAAAGTAGG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCCTACTTTAAGGAGATaGCTACTTAGGGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGPTLRR*LLRVLF
Trigger: AAAAAGTACCCTAAGTAGCCATCTCCTTAAAGTAGG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATTACCAAATTATGGTaGGTAAAGATGCCACATGCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDITKLW*VKMPHA
Trigger: TGCATGTGGCATCTTTACCCACCATAATTTGGTAAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACAGAAATTAGGTTGTaGTTCAGTGGAATTACAGAA +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATEIRL*FSGITE
Trigger: TTCTGTAATTCCACTGAACCACAACCTAATTTCTGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTGGTATGTTTGGGGCTaGTGTTATGAAAGACTATTA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGWYVWG*CYERLL
Trigger: TAATAGTCTTTCATAACACCAGCCCCAAACATACCA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATGTTTACAAACAGCAGTaGGTTGAAGGCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYVYKQQ*VEGNAV
Trigger: AACAGCATTGCCTTCAACCCACTGCTGTTTGTAAAC...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTTTACAAACAGCAGTaGGTTGAAGGCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVYKQQ*VEGNAV
Trigger: AACAGCATTGCCTTCAACCCACTGCTGTTTGTAAAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACACAATAGCAAAGACTTaGAACCAATCCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDTIAKT*NQSKCP
Trigger: TGGACATTTGGATTGGTTCCAAGTCTTTGCTATTGT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATTTTGCTAAGCTTGTaGATGAAGCCGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRILLSL*MKPHVS
Trigger: AGAGACATGCGGCTTCATCCACAAGCTTAGCAAAAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCTTAACAAATCTTTGTaGCTGAGAAACCATGAGATT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELLNKSL*LRNHEI
Trigger: AATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACTTAACAAATCTTTGTaGCTGAGAAACCATGAGATT +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELNKSL*LRNHEI
Trigger: AATCTCATGGTTTCTCAGCCACAAAGATTTGTTAAG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTCAGGAGGCTTGGATTaGCAGCTATTAAATACAATT +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGSGGLD*QLLNTI
Trigger: AATTGTATTTAATAGCTGCCAATCCAAGCCTCCTGA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTATTTGAATTTTTCTaGCCTAACCTTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLFEFF*PNLVGM
Trigger: CATGCCAACAAGGTTAGGCCAGAAAAATTCAAATAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTATTTGAATTTTTCTaGCCTAACCTTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTELFEFF*PNLVGM
Trigger: CATGCCAACAAGGTTAGGCCAGAAAAATTCAAATAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCATTATCCTCTCCTTaGAAATATCTTTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDALSSP*KYLSKW
Trigger: CCACTTTGAAAGATATTTCCAAGGAGAGGATAATGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTTATTCACATATAGAATaGGTTGCATTATCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELYSHIE*VALSSP
Trigger: AGGAGAGGATAATGCAACCCATTCTATATGTGAATA...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATATTCACATATAGAATaGGTTGCATTATCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAYSHIE*VALSSP
Trigger: AGGAGAGGATAATGCAACCCATTCTATATGTGAATA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTACATTGAGTCTCTATaGTTGACTATATGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHYIESL*LTICCE
Trigger: TTCACAGCATATAGTCAACCATAGAGACTCAATGTA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGTGGAACCATTGGTTaGACACATAAAATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACGTIG*THKMRV
Trigger: TACTCTCATTTTATGTGTCCAACCAATGGTTCCACA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTCAAACAGCATTACTTaGTATGGTGTAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPSNSIT*YGVEKT
Trigger: TGTTTTCTCTACACCATACCAAGTAATGCTGTTTGA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTTTGGGACACCTGTTaGGAACATTTACAGATCATT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDFWDTC*EHLQII
Trigger: AATGATCTGTAAATGTTCCCAACAGGTGTCCCAAAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGTAGAGGTTTTCAATTaGTTTACAGGAAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: SAYTENVCTNELTTIGLPVEVFN*FTGSLI
Trigger: AATCAGACTTCCTGTAAACCAATTGAAAACCTCTAC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTTCTCCACAAATATTaGCTAAAAGCTTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLLHKY*LKALVL
Trigger: GAGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACTTCAGGATCTCTTTaGGAAACTGAAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTSGSL*ETEDFP
Trigger: GGGAAAATCTTCAGTTTCCCAAAGAGATCCTGAAGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCTGAAATATTTTCCTTaGTTCTTTGTGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLKYFP*FFVRQL
Trigger: GAGTTGCCTCACAAAGAACCAAGGAAAATATTTCAG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCTTTTTGTAAGAAGTTaGTATAGTCACATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLFVRS*YSHMLL
Trigger: GAGAAGCATGTGACTATACCAACTTCTTACAAAAAG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
3UTR CAA 72 bp TGGGTGTCAAAATCAAGTCTGTATGAACCTTCTGTTTaGTCTCCCATGAAGACAAAAGGCATGCATATAAAA +
Preference number: 4 (lower is better)
Translates to: WVSKSSLYEPSV*SPMKTKGMHIK
Trigger: TTTTATATGCATGCCTTTTGTCTTCATGGGAGACAAAACAGAAGGTTCATACAGACTTGATTTTGACACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp TATGTTTATTGCGGCACTATTCACAATAGCAAAGACTaGGAACCAATCCAAATGTCCAACAATGATAGACTG +
Preference number: 4 (lower is better)
Translates to: YVYCGTIHNSKD*EPIQMSNNDRL
Trigger: CAGTCTATCATTGTTGGACATTTGGATTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp TTCTGGCCTAACCTTGTTGGCATGAGAGTTCCCACTTaGTATTATAATAGGCAAATTGATACACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: FWPNLVGMRVPT*YYNRQIDTHFS
Trigger: TGAAAAGTGTGTATCAATTTGCCTATTATAATACAAAGTGGGAACTCTCATGCCAACAAGGTTAGGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATGAACATAGCGTTCTaGATTCAGTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRMNIAF*IQLMCG
Trigger: TCCACACATCAACTGAATTCAGAACGCTATGTTCAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYTSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGACATCTAGGGCTCCATaGTGCAAAATATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRTSRAP*CKISFC
Trigger: GCAAAATGATATTTTGCATCATGGAGCCCTAGATGT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAGACACCACTTCTATaGGGAGGTATTCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKTPLL*GGIHCR
Trigger: TCTACAATGAATACCTCCTCATAGAAGTGGTGTCTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAATTTGCAACCAGGTaGGCACACCCTGATAATATA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKFATR*AHPDNI
Trigger: TATATTATCAGGGTGTGCTCACCTGGTTGCAAATTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAGTTATTTTTCCTCCTaGCCTCTAATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASYFSS*PLMKML
Trigger: AAGCATCTTCATTAGAGGTCAGGAGGAAAAATAACT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGAAAAATTCTGTTTTaGGAGAGATGGCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRKILF*ERWPPL
Trigger: TAGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATATTGCTCCTAACACATaGGTGGCTAAAATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYIAPNT*VAKIAN
Trigger: GTTTGCAATTTTAGCCACTCATGTGTTAGGAGCAAT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATTGCTCCTAACACATaGGTGGCTAAAATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYIAPNT*VAKIAN
Trigger: GTTTGCAATTTTAGCCACTCATGTGTTAGGAGCAAT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAACTTTGGGGTTTACTaGTGTTTTCCAACATCCGAA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRNFGVY*CFPTSE
Trigger: TTCGGATGTTGGAAAACATCAGTAAACCCCAAAGTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATTTTGAGTTGGAATTaGTATAGGGGAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKILSWN*YRGILG
Trigger: TCCAAGGATTCCCCTATATCAATTCCAACTCAAAAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAATAATGATACAAGGTaGCTTGTAGGACTCTGGATA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKANNDTR*LVGLWI
Trigger: TATCCAGAGTCCTACAAGTCACCTTGTATCATTATT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTATTTGGATATAACGTaGATGGGCCCATACCATAAA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAYLDIT*MGPYHK
Trigger: TTTATGGTATGGGCCCATTCACGTTATATCCAAATA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTTCAAGTCTGAATTATaGCTTCACTACTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYFKSEL*LHYCVV
Trigger: GACGACACAGTAGTGAAGTCATAATTCAGACTTGAA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGAATTGAATTGGATTTaGGGAGGAAAACCCATATTC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKELNWI*GGKPIF
Trigger: GAATATGGGTTTTCCTCCTCAAATCCAATTCAATTC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCCTATTGTAACAGCTaGTTTCATGGCTATGTGGAA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSYCNS*FHGYVE
Trigger: TTCCACATAGCCATGAAATCAGCTGTTACAATAGGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATCCAGATAGGTGCTTaGTGTTCTTTCAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRIQIGA*CSFSFL
Trigger: CAAGAAACTGAAAGAACATCAAGCACCTATCTGGAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCTTAAACTCTCACTaGTCGTATACTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFLNSH*SYTPLP
Trigger: AGGAAGTGGAGTATACGATCAGTGAGAGTTTAAGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCCTTGGTTCTTTGTaGGGCAACTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFLGSL*GNSVLF
Trigger: AAATAGAACAGAGTTGCCTCACAAAGAACCAAGGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTCCTTGGTTCTTTGTaGGGCAACTCTGTTCTATTT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRFLGSL*GNSVLF
Trigger: AAATAGAACAGAGTTGCCTCACAAAGAACCAAGGAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTTGAATCCCTGAGCTaGAATATTTTCCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLESLS*NIFLGS
Trigger: AGAACCAAGGAAAATATTTCAGCTCAGGGATTCAAG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCCTGTTTCTGTCTTTaGGTGGGAATTTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSCFCL*VGIYFL
Trigger: CAAGAAGTAAATTCCCACTCAAAGACAGAAACAGGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCCTGTTTCTGTCTTTaGGTGGGAATTTACTTCTTG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSCFCL*VGIYFL
Trigger: CAAGAAGTAAATTCCCACTCAAAGACAGAAACAGGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVATVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTCCAAGATTCCATCTaGTTAAGAAAGACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRFQDSI*LRKTLS
Trigger: TGACAGCGTCTTTCTTAAGCAGATGGAATCTTGGAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCCAAGATTCCATCTaGTTAAGAAAGACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFQDSI*LRKTLS
Trigger: TGACAGCGTCTTTCTTAAGCAGATGGAATCTTGGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCATTTCAGGGAGTCTaGCTAGCTCTTGATATTACA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSFQGV*LALDIT
Trigger: TGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTCATTTCAGGGAGTCTaGCTAGCTCTTGATATTACA +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYSFQGV*LALDIT
Trigger: TGTAATATCAAGAGCTAGGCAGACTCCCTGAAATGA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGCCATTCATGTCTCATaGCAGTCTTTTTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKAIHVS*QSFSIV
Trigger: AACAATTGAAAAAGACTGGCATGAGACATGAATGGC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCCATTCATGTCTCATaGCAGTCTTTTTCAATTGTT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAAIHVS*QSFSIV
Trigger: AACAATTGAAAAAGACTGGCATGAGACATGAATGGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATGATCGGTTTAGATTaGTTTAACTTGAAGGACACT +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAMIGLD*FNLKDT
Trigger: AGTGTCCTTCAAGTTAAAGCAATCTAAACCGATCAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTTGTCAAATCTGTCTaGACATTAGGATCACTTAGG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVVKSV*TLGSLR
Trigger: CCTAAGTGATCCTAATGTGCAGACAGATTTGACAAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGCCATGTTGGTGTTCTaGATCTTAAGAGAAGACTAT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRAMLVF*ILREDY
Trigger: ATAGTCTTCTCTTAAGATGCAGAACACCAACATGGC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACATATGTATACATGTaGCATGTTGGTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATYVYM*HVGVLH
Trigger: ATGCAGAACACCAACATGGCACATGTATACATATGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGAATCTTTTGATATGTaGCTCTTCAGACCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYESFDM*LFRPLS
Trigger: GGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGAATCTTTTGATATGTaGCTCTTCAGACCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRESFDM*LFRPLS
Trigger: GGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKALPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAAAATGGGCCAAACGTaGGAGATCATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRKMGQT*EIMRMI
Trigger: TATCATTCTCATGATCTCCCACGTTTGGCCCATTTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCACATTTTTAGGTGTCTaGCAAGTATCCTCTAAATCA +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGTFLGV*QVSSKS
Trigger: TGATTTAGAGGATACTTGCCAGACACCTAAAAATGT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATATTCCCAGAGAATACTaGCCCAGTAAGAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYIPREY*PSKKWN
Trigger: ATTCCATTTCTTACTGGGCCAGTATTCTCTGGGAAT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAACAGATTAATGAGGTaGAAGGGACTAGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRNRLMR*KGLELW
Trigger: CCAAAGTTCTAGTCCCTTCCACCTCATTAATCTGTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACAGTTATCTGGCAAATaGTCTCAAACATACATTTCA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAQLSGK*SQTYIS
Trigger: TGAAATGTATGTTTGAGACCATTTGCCAGATAACTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATCTGTGCCATACTTTTaGTACCTTCATAATAAACGG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKSVPYF*YLHNKR
Trigger: CCGTTTATTATGAAGGTACCAAAAGTATGGCACAGA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCTGTGCCATACTTTTaGTACCTTCATAATAAACGG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASVPYF*YLHNKR
Trigger: CCGTTTATTATGAAGGTACCAAAAGTATGGCACAGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTACCAAATTATGGTaGGTAAAGATGCCACATGCA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAITKLW*VKMPHA
Trigger: TGCATGTGGCATCTTTACCCACCATAATTTGGTAAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATCCACTTAGTAAAATaGAAAACACTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAIHLVK*KTLELQ
Trigger: CTGAAGCTCTAGTGTTTTCCATTTTACTAAGTGGAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATATTCTCTGTCAAATGTaGAGGTCATGGATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYILCQM*RSWILL
Trigger: AAGAAGGATCCATGACCTCCACATTTGACAGAGAAT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTTATTTGAATTTTTCTaGCCTAACCTTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGLFEFF*PNLVGM
Trigger: CATGCCAACAAGGTTAGGCCAGAAAAATTCAAATAA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAGGAAATTAATGGTTTaGGAGGTTGAGCAACAGACT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRKLMV*EVEQQT
Trigger: AGTCTGTTGCTCAACCTCCCAAACCATTAATTTCCT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAAACTGTTCAGTGGTaGTCTTCCTATTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKTVQW*SSYCNS
Trigger: GCTGTTACAATAGGAAGACCACCACTGAACAGTTTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTACAAAACTGTTCAGTaGTGGTCTTCCTATTGTAAC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAYKTVQ*WSSYCN
Trigger: GTTACAATAGGAAGACCACCACTGAACAGTTTTGTA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCAAACAGCATTACTTaGTATGGTGTAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASNSIT*YGVEKT
Trigger: TGTTTTCTCTACACCATACCAAGTAATGCTGTTTGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTAGAGGTTTTCAATTaGTTTACAGGAAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVEVFN*FTGSLI
Trigger: AATCAGACTTCCTGTAAACCAATTGAAAACCTCTAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACTTCAGGATCTCTTTaGGAAACTGAAGATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTSGSL*ETEDFP
Trigger: GGGAAAATCTTCAGTTTCCCAAAGAGATCCTGAAGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGCATTAGCTATAGACTaGTATTCAACTTCAGACGTT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRALAID*YSTSDV
Trigger: AACGTCTGAAGTTGAATATCAGTCTATAGCTAATGC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAAAATCAAGTCTGTATaGACCTTCTGTTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRKIKSV*TFCFVS
Trigger: GGAGACAAAACAGAAGGTTCATACAGACTTGATTTT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCACAGATGTAGAAACTaGGTTTCAAGAAGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHRCRN*VSRRLS
Trigger: ACTTAACCTTCTTGAAACTCAGTTTCTACATCTGTG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTCTCTGGACAAAATATaGAAAGGTAGGCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYSLDKI*KGRLNN
Trigger: GTTATTCAGCCTACCTTTTCATATTTTGTCCAGAGA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTTAGCTTTCAATTATaGACACTCTCAGCCTCTATT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVSFQL*TLSASI
Trigger: AATAGAGGCTGAGAGTGTTCATAATTGAAAGCTAAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTATTTGGTGGTACGCTaGGTGAAAATATGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYYLVVR*VKICSF
Trigger: AAAGCTACATATTTTCACTCAGCGTACCACCAAATA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCTCTTTAGCCAGAAATaGCTGAGAAATTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYLFSQK*LRNFEL
Trigger: CAACTCAAAATTTCTCAGTCATTTCTGGCTAAAGAG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGACAAATCTTTGTGGCTaGGAAACCATGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRTNLCG*ETMRFH
Trigger: ATGAAATCTCATGGTTTCTCAGCCACAAAGATTTGT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCAGATTTATAAAGTATaGCCTATAGCATCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYQIYKV*PIASNS
Trigger: GGAGTTGGATGCTATAGGTCATACTTTATAAATCTG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTTGACTATATGCTGTaGAGGAAGGACATAAATACA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVDYML*RKDINT
Trigger: TGTATTTATGTCCTTCCTTCACAGCATATAGTCAAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR TCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAAACATTCTCTTCTTTaGAGCTTTCGTCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYKHSLL*SFRLHF
Trigger: GAAGTGAAGACGAAAGCTTCAAAGAAGAGAATGTTT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAACTCACTGTTGTTGTaGACCTTTAAACAACTCTTA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKNSLLL*TFKQLL
Trigger: TAAGAGTTGTTTAAAGGTGCACAACAACAGTGAGTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATGATCGGTTTAGATTaGTTTAACTTGAAGGACACT +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKMIGLD*FNLKDT
Trigger: AGTGTCCTTCAAGTTAAAGCAATCTAAACCGATCAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTGTAGACTAAAAATCTaGTTTTCAATCTCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRCRLKI*FSISCE
Trigger: CTCGCAGGAGATTGAAAAGCAGATTTTTAGTCTACA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGATGGGATAAGAAGATaGTTCTCAATATTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYDGIRR*FSIFFL
Trigger: CAGGAAGAATATTGAGAAGCATCTTCTTATCCCATC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643295.2
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCAGCTCTTCATAGCTaGATTGCTCAAAAATTGACT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSALHS*IAQKLT
Trigger: AGTCAATTTTTGAGCAATCCAGCTATGAAGAGCTGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLPAII*CANFCV
Trigger: TACACAGAAATTTGCGCACCATATTATTGCAGGAAG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGTGCTGAAAGAGAGATaGTTTAAAACGGATCACATT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYVLKER*FKTDHI
Trigger: AATGTGATCCGTTTTAAACCATCTCTCTTTCAGCAC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATAAGCAAATTCTACCCTaGACTTGGAGTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYKQILP*TWSKCD
Trigger: ATCACATTTACTCCAAGTCCAGGGTAGAATTTGCTT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACTGATATCGTCACATaGTCCTTTAGTGACCAAAAA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTDIVT*SFSDQK
Trigger: TTTTTGGTCACTAAAGGACCATGTGACGATATCAGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATTACCAAATTATGGTaGGTAAAGATGCCACATGCA +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYITKLW*VKMPHA
Trigger: TGCATGTGGCATCTTTACCCACCATAATTTGGTAAT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATCCACTTAGTAAAATaGAAAACACTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKIHLVK*KTLELQ
Trigger: CTGAAGCTCTAGTGTTTTCCATTTTACTAAGTGGAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACAGAAATTAGGTTGTaGTTCAGTGGAATTACAGAA +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTEIRL*FSGITE
Trigger: TTCTGTAATTCCACTGAACCACAACCTAATTTCTGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCAGGAGGCTTGGATTaGCAGCTATTAAATACAATT +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSGGLD*QLLNTI
Trigger: AATTGTATTTAATAGCTGCCAATCCAAGCCTCCTGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTATTCACATATAGAATaGGTTGCATTATCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAYSHIE*VALSSP
Trigger: AGGAGAGGATAATGCAACCCATTCTATATGTGAATA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTACATTGAGTCTCTATaGTTGACTATATGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAYIESL*LTICCE
Trigger: TTCACAGCATATAGTCAACCATAGAGACTCAATGTA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTACAAAACTGTTCAGTaGTGGTCTTCCTATTGTAAC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRYKTVQ*WSSYCN
Trigger: GTTACAATAGGAAGACCACCACTGAACAGTTTTGTA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTTTGGGACACCTGTTaGGAACATTTACAGATCATT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFWDTC*EHLQII
Trigger: AATGATCTGTAAATGTTCCCAACAGGTGTCCCAAAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACTAAAATATGGTTTTaGGACACCTGTTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTKIWF*DTCWEH
Trigger: ATGTTCCCAACAGGTGTCCCAAAACCATATTTTAGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAAACTTACTAAAATATaGTTTTGGGACACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAKLTKI*FWDTCW
Trigger: CCAACAGGTGTCCCAAAACCATATTTTAGTAAGTTT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAAACTTACTAAAATATaGTTTTGGGACACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKKLTKI*FWDTCW
Trigger: CCAACAGGTGTCCCAAAACCATATTTTAGTAAGTTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTTCTCCACAAATATTaGCTAAAAGCTTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLLHKY*LKALVL
Trigger: GAGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCTGAAATATTTTCCTTaGTTCTTTGTGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYLKYFP*FFVRQL
Trigger: GAGTTGCCTCACAAAGAACCAAGGAAAATATTTCAG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CCA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACTTTTTGTAAGAAGTTaGTATAGTCACATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLFVRS*YSHMLL
Trigger: GAGAAGCATGTGACTATACCAACTTCTTACAAAAAG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
3UTR CAA 72 bp ACACACACACACAGAGTCATCTATATGAACACGTACTaGAGTTTCTTAAACATATATGAAGCACCTTCCATT +
Preference number: 4 (lower is better)
Translates to: THTHRVIYMNTY*SFLNIYEAPSI
Trigger: AATGGAAGGTGCTTCATATATGTTTAAGAAACTCAAGTACGTGTTCATATAGATGACTCTGTGTGTGTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp AGGAAAAAGAAGAGAATTACACACTGTTTCCTTCAATaGTTAGATGGCACTGGATGTAGTGTTTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: RKKKRITHCFLQ*LDGTGCSVFNV
Trigger: AACATTGAAAACACTACATCCAGTGCCATCTAACAATTGAAGGAAACAGTGTGTAATTCTCTTCTTTTTCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
3UTR CAA 72 bp GTATCACCCCAAAGTGATAGTCAAAAGTACCTATGTTaGCCTAGTTCTCAGATTACAACTATGATGATAATT +
Preference number: 4 (lower is better)
Translates to: VSPQSDSQKYLC*PSSQITTMMII
Trigger: AATTATCATCATAGTTGTAATCTGAGAACTAGGCAAACATAGGTACTTTTGACTATCACTTTGGGGTGATAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTVSLA*FIIFKH
Trigger: GTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR GCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCACTACTGTAAGCCTTaGTTGCTTCATAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYHYCKP*LLHNFQ
Trigger: TTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCAAAGATCTCTAATGTaGTGTGATTTTCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYQRSLM*CDFQRM
Trigger: CATCCTTTGAAAATCACAGCACATTAGAGATCTTTG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGTCAAATCAAAAACTaGTTTGGTCTCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSQIKN*FGLKSM
Trigger: CATGGATTTGAGACCAAAGCAGTTTTTGATTTGACT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAGTCAAATCAAAAACTaGTTTGGTCTCAAATCCATG +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSQIKN*FGLKSM
Trigger: CATGGATTTGAGACCAAAGCAGTTTTTGATTTGACT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR GCA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTTCGTTTTGAGATCTaGAGAACAAAGTCAATGTCT +
Preference number: 4 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFRFEI*RTKSMS
Trigger: AGACATTGACTTTGTTCTGCAGATCTCAAAACGAAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATATCCACTTAGTAAAATaGAAAACACTAGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYIHLVK*KTLELQ
Trigger: CTGAAGCTCTAGTGTTTTCCATTTTACTAAGTGGAT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCTTTTTGTAAGAAGTTaGTATAGTCACATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLFVRS*YSHMLL
Trigger: GAGAAGCATGTGACTATACCAACTTCTTACAAAAAG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCACACACTGGGCCTGTaGTGGGGTCAGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDHTLGL*WGQGRG
Trigger: CCCCCTCCCCTGACCCCACAACAGGCCCAGTGTGTG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS TCA 90 bp GTTCAGCTAGATCCAACAGTGCTCTGTGCAGCCTGGAAGCATGAGTaGTCCTTGGGCCTCACACAAAAGCGAGATAATTGGCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: VQLDPTVLCAAWKHE*SLGLTQKRDNWLSM
Trigger: CATTGAGAGCCAATTATCTCGCTTTTGTGTGAGGCCCAAGGATCACTCATGCTTCCAGGCTGCACAGAGCACTGTTGGATCTAGCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000550365.1
ENST00000552435.6
ENST00000636416.1
ENST00000637621.1
ENST00000642741.1
ENST00000646270.1
CDS-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACATGTCTAACTACCAGTTaGGTATGTTTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTCLTTS*VCLGLV
Trigger: CACCAGCCCCAAACATACCAAACTGGTAGTTAGACA...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACACACACTGGGCCTGTaGTGGGGTCAGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKHTLGL*WGQGRG
Trigger: CCCCCTCCCCTGACCCCACAACAGGCCCAGTGTGTG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATCACACACTGGGCCTGTaGTGGGGTCAGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYHTLGL*WGQGRG
Trigger: CCCCCTCCCCTGACCCCACAACAGGCCCAGTGTGTG...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACACATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAACAAACAGCAGTGGGTaGAAGGCAATGCTGTTTATA +
Preference number: 5 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTTNSSG*KAMLFI
Trigger: TATAAACAGCATTGCCTTCAACCCACTGCTGTTTGT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTCTATGGTGCCCACATaGTGTCACCAGCCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYSMVPT*CHQPAV
Trigger: TACGGCTGGCTGGTGACACAATGTGGGCACCATAGA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS GCA 90 bp GTTTTCTGCAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTGATCTCCAGTTCTTTTGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: VFCSSCLKDRSTAAL*IQVIWLISSSFEGP
Trigger: GGGGCCTTCAAAAGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551921.2
ENST00000637470.1
CDS-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTCGGTCTATGGTGCCCACATTGTGTCACCAGCCAGCCGTATGCAGACTTACAAAAAATATCCTAGTGTaGTTTGCACCACAGCATACC +
Preference number: 5 (lower is better)
Translates to: FRSMVPTLCHQPAVCRLTKNILV*FAPQHT
Trigger: GGTATGCTGTGGTGCAAACAACACTAGGATATTTTT...TGTAAGTCTGCATACGGCTGGCTGGTGACACAATGTGGGCACCATAGACCGAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS TCA 90 bp ATTAGAAAACTGGCAATATCCTCTGATCTATTGCCCGCAAAGCCATaGCTTGATGGAGAGTTTCATTCCCTGGGCTCAGTTCTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: IRKLAISSDLLPAKP*LDGEFHSLGSVLQK
Trigger: CTTCTGGAGAACTGAGCCCAGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGTTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS GCA 90 bp GTTTTCTGCAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTGATCTCCAGTTCCCATCCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: VFCSSCLKDRSTAAL*IQVIWLISSSHPSR
Trigger: TCTACTTGGATGGGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS GCA 90 bp ACTACCTTCAATCTTCCCTTCAGCTTTCTTGAATCTTTTGATATGTaGCTCTTCAGACCTCTTTCCTCTGTCTACCTGTCCTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: TTFNLPFSFLESFDM*LFRPLSSVYLSSQT
Trigger: CGTCTGGGAGGACAGGTAGACAGAGGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAAGATTGAAGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS GCA 90 bp GAAGATTTTCCCGAAGTGAGTCCTCTGAGATCTCTTCCTTCCCATTaGTTCTGCTCCTCCTTCATCCTTTTACTACCTTCAATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: EDFPEVSPLRSLPSH*FCSSFILLLPSIFP
Trigger: AGGGAAGATTGAAGGTAGTAAAAGGATGAAGGAGGAGCAGAAGCAATGGGAAGGAAGAGATCTCAGAGGACTCACTTCGGGAAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATCTTCTGGATCCCTTaGCCACACTCCTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIFWIP*PHSSAQ
Trigger: CTGTGCAGAGGAGTGTGGCAAAGGGATCCAGAAGAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS GCA 90 bp GGTGAGTCAGAGTGGATAAAGCTTCAACCTTGCTATAGCGTTTTCTaGAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTGCATA +
Preference number: 5 (lower is better)
Translates to: GESEWIKLQPCYSVF*SSCLKDRSTAALCI
Trigger: TATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTATCCACTCTGACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATCTTCTGGATCCCTTaGCCACACTCCTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDIFWIP*PHSSAQ
Trigger: CTGTGCAGAGGAGTGTGGCAAAGGGATCCAGAAGAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS TCA 90 bp AGTGATCCTTGGGCCTCACACAAAAGCGAGATAATTGGCTCTCAATaGAGAGATGTAAACATCCATCATAATGGCACTGTGCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: SDPWASHKSEIIGSQ*RDVNIHHNGTVLKL
Trigger: CAGTTTCAGCACAGTGCCATTATGATGGATGTTTACATCTCTTCATTGAGAGCCAATTATCTCGCTTTTGTGTGAGGCCCAAGGATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000550365.1
ENST00000637621.1
ENST00000646270.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGCTGTACAGAAACCGTaGATACCCAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHAVQKP*IPRDRE
Trigger: TTCTCTGTCTCTGGGTATCAACGGTTTCTGTACAGC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000552808.6
ENST00000620241.4
ENST00000636211.1
ENST00000637661.1
ENST00000645144.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATCTTCTGGATCCCTTaGCCACACTCCTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKIFWIP*PHSSAQ
Trigger: CTGTGCAGAGGAGTGTGGCAAAGGGATCCAGAAGAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATACTTTGGTCTCAAATTaGCAACCAGGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHTLVSN*QPGEHT
Trigger: GGTGTGCTCACCTGGTTGCAAATTTGAGACCAAAGT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCCGCAAAGCCATGACTaGATGGAGAGTTTCATTCCC +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDPQSHD*MESFIP
Trigger: GGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAGATCCACAGCAGCTTaGTGCATACAAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTERSTAA*CIQVIW
Trigger: CCAGATCACTTGTATGCACAAAGCTGCTGTGGATCT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCAGAGTTAGAGCTTTGTaGATTGAGATATGTGGAACT +
Preference number: 5 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSRVRAL*IEICGT
Trigger: AGTTCCACATATCTCAATCAACAAAGCTCTAACTCT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTCTCATTGAAGGGCATGGGCCAGAGATATGCATACAGAAATTGTCCCTCTAGCATTCTTAACAAATCTTaGTGGCTGAGAAACCATGAG +
Preference number: 5 (lower is better)
Translates to: VSLKGMGQRYAYRNCPSSILNKS*WLRNHE
Trigger: CTCATGGTTTCTCAGCCACAAAGATTTGTTAAGAAT...GCTAGAGGGACAATTTCTGTATGCATATCTCTGGCCCATGCCCTTCAATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTCTATGGTGCCCACATaGTGTCACCAGCCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRSMVPT*CHQPAV
Trigger: TACGGCTGGCTGGTGACACAATGTGGGCACCATAGA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTATGGTGCCCACATaGTGTCACCAGCCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSMVPT*CHQPAV
Trigger: TACGGCTGGCTGGTGACACAATGTGGGCACCATAGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS GCA 90 bp GATAACAATAATCCATTAGAAAACTGGCAATATCCTCTGATCTATTaGCCGCAAAGCCATGACTTGATGGAGAGTTTCATTCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: DNNNPLENWQYPLIY*PQSHDLMESFIPWA
Trigger: AGCCCAGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGTTTTCTAATGGATTATTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS CCA 90 bp AGCTTCAGAGAAAACCTGCCCGATAACAATAATCCATTAGAAAACTaGCAATATCCTCTGATCTATTGCCCGCAAAGCCATGACTTGATG +
Preference number: 5 (lower is better)
Translates to: SFRENLPDNNNPLEN*QYPLIYCPQSHDLM
Trigger: CATCAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGTTTTCTAATGGATTATTGTTATCGGGCAGGTTTTCTCTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCTGTACAGAAACCGTaGATACCCAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDAVQKP*IPRDRE
Trigger: TTCTCTGTCTCTGGGTATCAACGGTTTCTGTACAGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000552808.6
ENST00000620241.4
ENST00000636211.1
ENST00000637661.1
ENST00000645144.1
ENST00000646655.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCTGTACAGAAACCGTaGATACCCAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAAVQKP*IPRDRE
Trigger: TTCTCTGTCTCTGGGTATCAACGGTTTCTGTACAGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000552808.6
ENST00000620241.4
ENST00000636211.1
ENST00000637661.1
ENST00000645144.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTCAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATCTTCTGGATCCCTTaGCCACACTCCTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYIFWIP*PHSSAQ
Trigger: CTGTGCAGAGGAGTGTGGCAAAGGGATCCAGAAGAT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000548651.5
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATCTTCTGGATCCCTTaGCCACACTCCTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRIFWIP*PHSSAQ
Trigger: CTGTGCAGAGGAGTGTGGCAAAGGGATCCAGAAGAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000643295.2
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGAAGGGACTAGAACTTaGGGAAAGTGCAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPEGTRT*GKCNLV
Trigger: AACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTTC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGAAGGGACTAGAACTTaGGGAAAGTGCAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKEGTRT*GKCNLV
Trigger: AACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTTC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATTACCAAAATTGTCTTTaGACCCTCTCAGGGAGTCAA +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYYQNCL*TLSGSQ
Trigger: TTGACTCCCTGAGAGGGTCAAAAGACAATTTTGGTA...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGTCTAACTACCAGTTaGGTATGTTTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACLTTS*VCLGLV
Trigger: CACCAGCCCCAAACATACCAAACTGGTAGTTAGACA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTAGTTGCTCCGTGGTaGTCAAATCTGTCTGCACAT +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHLVAPW*SNLSAH
Trigger: ATGTGCAGACAGATTTGACAACCACGGAGCAACTAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCATATTTTGCTAAGCTaGTGGATGAAGCCGCATGTC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHHILLS*WMKPHV
Trigger: GACATGCGGCTTCATCCACAAGCTTAGCAAAATATG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCATATTTTGCTAAGCTaGTGGATGAAGCCGCATGTC +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKHILLS*WMKPHV
Trigger: GACATGCGGCTTCATCCACAAGCTTAGCAAAATATG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAGACACACACAGAGTTaGCTTATAAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHRHTQS*LISSGS
Trigger: GCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHSTLWA*FSSLET
Trigger: TGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTATATTTGGGTCTCATaGAAGGGCATGGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGYIWVS*KGMGQR
Trigger: TCTCTGGCCCATGCCCTTCAATGAGACCCAAATATA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS TCA 90 bp AATTTAAACATTCTCTTCTTTGAAGCTTTCGTCTTCACTTCTGGTTaGTTGATGGATGAGCCATTGGTGATTTCGACTCCTGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: NLNILFFEAFVFTSG*LMDEPLVISTPEPV
Trigger: CACTGGCTCAGGAGTCGAAATCACCAATGGCTCATCCATCAATCAACCAGAAGTGAAGACGAAAGCTTCAAAGAAGAGAATGTTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGCTGTACAGAAACCGTaGATACCCAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKAVQKP*IPRDRE
Trigger: TTCTCTGTCTCTGGGTATCAACGGTTTCTGTACAGC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000552808.6
ENST00000620241.4
ENST00000636211.1
ENST00000637661.1
ENST00000645144.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCGTTTTCTGCAGCTCTaGTTTGAAAGACAGATCCAC +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDRFLQL*FERQIH
Trigger: GTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGATGCCATTACTGTGTaGATGGATGTATTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVADAITV*MDVLSR
Trigger: CCTTGACAATACATCCATCAACACAGTAATGGCATC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGGTAACTCACTGTTGTaGTGCACCTTTAAACAACTC +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKGNSLL*CTFKQL
Trigger: GAGTTGTTTAAAGGTGCACAACAACAGTGAGTTACC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAATCAGATCAACACTATaGGGCACCCAGTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEIRSTL*GTQLFG
Trigger: ACCAAATAACTGGGTGCCCAATAGTGTTGATCTGAT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATCAGATCAACACTATaGGGCACCCAGTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIRSTL*GTQLFG
Trigger: ACCAAATAACTGGGTGCCCAATAGTGTTGATCTGAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTAGTTGCTCCGTGGTaGTCAAATCTGTCTGCACAT +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLVAPW*SNLSAH
Trigger: ATGTGCAGACAGATTTGACAACCACGGAGCAACTAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGCAAGTCAATATGACTaGTTCTGTTTCAGCTATCTG +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYASQYD*FCFSYL
Trigger: CAGATAGCTGAAACAGAACAAGTCATATTGACTTGC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGGACACTCTGAACAATaGAACAAGACTACGCTGAAA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHGHSEQ*NKTTLK
Trigger: TTTCAGCGTAGTCTTGTTCAATTGTTCAGAGTGTCC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELGHGSF*APKIKT
Trigger: AGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGGTCATGGATCCTTCTaGGCACCTAAGATTAAAACT +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPGHGSF*APKIKT
Trigger: AGTTTTAATCTTAGGTGCCAAGAAGGATCCATGACC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAGACACACACAGAGTTaGCTTATAAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGRHTQS*LISSGS
Trigger: GCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACA +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDSTLWA*FSSLET
Trigger: TGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATAACCTTGGAATTGAATaGGATTTGAGGAGGAAAACC +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYNLGIE*DLRRKT
Trigger: GGTTTTCCTCCTCAAATCCAATTCAATTCCAAGGTT...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTATATTTGGGTCTCATaGAAGGGCATGGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAYIWVS*KGMGQR
Trigger: TCTCTGGCCCATGCCCTTCAATGAGACCCAAATATA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGTTTTGGGACACCTGTaGGGAACATTTACAGATCAT +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAVLGHL*GTFTDH
Trigger: ATGATCTGTAAATGTTCCCAACAGGTGTCCCAAAAC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGTTTTGGGACACCTGTaGGGAACATTTACAGATCAT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEVLGHL*GTFTDH
Trigger: ATGATCTGTAAATGTTCCCAACAGGTGTCCCAAAAC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAACAGCCTCCATAACATaGCATGTATGGGCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTETASIT*HVWAKE
Trigger: TTCTTTTGCCCATACATGCAATGTTATGGAGGCTGT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGCTGTACAGAAACCGTaGATACCCAGAGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYAVQKP*IPRDRE
Trigger: TTCTCTGTCTCTGGGTATCAACGGTTTCTGTACAGC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACAAAAACATCTCCTGTaGAAGGTGGTTTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKQKHLL*KVVSPK
Trigger: TTTGGGGGAAACCACCTTCAACAGGAGATGTTTTTG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCACATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVANISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGACTTTGGTCTCAAATTaGCAACCAGGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRTLVSN*QPGEHT
Trigger: GGTGTGCTCACCTGGTTGCAAATTTGAGACCAAAGT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGATCCACAGCAGCTTaGTGCATACAAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRSTAA*CIQVIW
Trigger: CCAGATCACTTGTATGCACAAAGCTGCTGTGGATCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTTCTGCAGCTCTTGTTaGAAAGACAGATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAFCSSC*KDRSTA
Trigger: TGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCTCTCTCATTCTGGCCTaGCTAGGAAATAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGSLILA*LGNRSL
Trigger: CAAAGATCTATTTCCTAGCAAGGCCAGAATGAGAGA...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTCTCATTCTGGCCTaGCTAGGAAATAGATCTTTG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASLILA*LGNRSL
Trigger: CAAAGATCTATTTCCTAGCAAGGCCAGAATGAGAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGATGCCATTACTGTGTaGATGGATGTATTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGDAITV*MDVLSR
Trigger: CCTTGACAATACATCCATCAACACAGTAATGGCATC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTAAGAAAAATTCTGTTTaGAGAGAGATGGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELKKNSV*REMASS
Trigger: AGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCTT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAAGAAAAATTCTGTTTaGAGAGAGATGGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEKKNSV*REMASS
Trigger: AGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCTT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAAAGAAAAATTCTGTTTaGAGAGAGATGGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVAKKNSV*REMASS
Trigger: AGAGGAGGCCATCTCTCTCAAAACAGAATTTTTCTT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGAAGGGACTAGAACTTaGGGAAAGTGCAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKEGTRT*GKCNLV
Trigger: AACAAGGTTGCACTTTCCCAAAGTTCTAGTCCCTTC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATGAGAGATAGGTTGTaGGGAATATTCAGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELMRDRL*GIFRVN
Trigger: ATTCACCCTGAATATTCCCAACAACCTATCTCTCAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCATCAGGGAGTCAAGTTTaGATTTGCTTGAATACAAGC +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVASGSQV*ICLNTS
Trigger: GCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGA...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATCAGGGAGTCAAGTTTaGATTTGCTTGAATACAAGC +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESGSQV*ICLNTS
Trigger: GCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATACCAAAATTGTCTTTaGACCCTCTCAGGGAGTCAA +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAYQNCL*TLSGSQ
Trigger: TTGACTCCCTGAGAGGGTCAAAAGACAATTTTGGTA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAGATACGTACCAAAATaGTCTTTTGACCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVARYVPK*SFDPLR
Trigger: CCTGAGAGGGTCAAAAGACAATTTTGGTACGTATCT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAACACATGACTCATCATaGCCCAAATCAATTGCCCAA +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVATHDSS*PKSIAQ
Trigger: TTGGGCAATTGATTTGGGCAATGATGAGTCATGTGT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTAGTTGCTCCGTGGTaGTCAAATCTGTCTGCACAT +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKLVAPW*SNLSAH
Trigger: ATGTGCAGACAGATTTGACAACCACGGAGCAACTAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGATATAGGGGAATCCTaGGAACTATGTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHDIGES*ELCVNM
Trigger: CATATTCACACATAGTTCCAAGGATTCCCCTATATC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGATATAGGGGAATCCTaGGAACTATGTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPDIGES*ELCVNM
Trigger: CATATTCACACATAGTTCCAAGGATTCCCCTATATC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAGATATAGGGGAATCCTaGGAACTATGTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVADIGES*ELCVNM
Trigger: CATATTCACACATAGTTCCAAGGATTCCCCTATATC...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATCAAAAGTACCTATGTTaGCCTAGTTCTCAGATTACA +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYQKYLC*PSSQIT
Trigger: TGTAATCTGAGAACTAGGCAAACATAGGTACTTTTG...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATGAGAAAGTAGAATGCTaGGGAGGTCATATGTTTCAA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHEKVEC*GGHMFQ
Trigger: TTGAAACATATGACCTCCCAAGCATTCTACTTTCTC...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGAGAAAGTAGAATGCTaGGGAGGTCATATGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPEKVEC*GGHMFQ
Trigger: TTGAAACATATGACCTCCCAAGCATTCTACTTTCTC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGAGAAAGTAGAATGCTaGGGAGGTCATATGTTTCAA +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEEKVEC*GGHMFQ
Trigger: TTGAAACATATGACCTCCCAAGCATTCTACTTTCTC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCAACTCTATGGGCATaGTTTAGCAGCCTCGAAACA +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASTLWA*FSSLET
Trigger: TGTTTCGAGGCTGCTAAACAATGCCCATAGAGTTGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATTTTCCAGTCATTCTaGAGACTGTCAACTCTATGG +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIFQSF*RLSTLW
Trigger: CCATAGAGTTGACAGTCTCAAGAATGACTGGAAAAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGACTCTTACCACTGATTaGATTGATACTGAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKTLTTD*IDTEPV
Trigger: TACAGGCTCAGTATCAATCAAATCAGTGGTAAGAGT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCACTCTTACCACTGATTaGATTGATACTGAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPTLTTD*IDTEPV
Trigger: TACAGGCTCAGTATCAATCAAATCAGTGGTAAGAGT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCTCTCCCCTTACTCCTTaGATTTTCAGACTAATTTGG +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPSPLTP*IFRLIW
Trigger: CCAAATTAGTCTGAAAATCAAAGGAGTAAGGGGAGA...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAAGACCAAGGCCAAGGATCTTGCCCCTCATTCTATAATGAGGTCATCTCATATGGAATTGAATTGGATTaGAGGAGGAAAACCCATATT +
Preference number: 5 (lower is better)
Translates to: KDQGQGSCPSFYNEVISYGIELD*RRKTHI
Trigger: AATATGGGTTTTCCTCCTCAAATCCAATTCAATTCC...ATATGAGATGACCTCATTATAGAATGAGGGGCAAGATCCTTGGCCTTGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAACCTTGGAATTGAATaGGATTTGAGGAGGAAAACC +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPNLGIE*DLRRKT
Trigger: GGTTTTCCTCCTCAAATCCAATTCAATTCCAAGGTT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGATTGAGTCTCTATGGTaGACTATATGCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKIESLW*TICCEG
Trigger: TCCTTCACAGCATATAGTCAACCATAGAGACTCAAT...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTATATTTGGGTCTCATaGAAGGGCATGGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRYIWVS*KGMGQR
Trigger: TCTCTGGCCCATGCCCTTCAATGAGACCCAAATATA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGCTTTCTTGAATCTTTaGATATGTGCCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEAFLNL*ICASSD
Trigger: GTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATTTCCCTTCAGCTTTCTaGAATCTTTTGATATGTGCC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHFPSAF*NLLICA
Trigger: GGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAA...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGCTGAAATATTTTCCTaGGTTCTTTGTGAGGCAACT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEAEIFS*VLCEAT
Trigger: AGTTGCCTCACAAAGAACCAAGGAAAATATTTCAGC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCTGCAGCTCTTGTTaGAAAGACAGATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFCSSC*KDRSTA
Trigger: TGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCGTTTTCTGCAGCTCTaGTTTGAAAGACAGATCCAC +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRFLQL*FERQIH
Trigger: GTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACGAGAAAAAGAGCATaGTCTGGTTATCAGAATATC +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATRKRA*SGYQNI
Trigger: GATATTCTGATAACCAGACAATGCTCTTTTTCTCGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATACGAGAAAAAGAGCATaGTCTGGTTATCAGAATATC +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHTRKRA*SGYQNI
Trigger: GATATTCTGATAACCAGACAATGCTCTTTTTCTCGT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCAAAAATATCCTAGTGTaGTTTGCACCACAGCATACC +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGKNILV*FAPQHT
Trigger: GGTATGCTGTGGTGCAAACAACACTAGGATATTTTT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAATATCCTAGTGTaGTTTGCACCACAGCATACC +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAKNILV*FAPQHT
Trigger: GGTATGCTGTGGTGCAAACAACACTAGGATATTTTT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATGCATACTGTATTTTTaGCTTGAAACCTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTECILYF*LETCQH
Trigger: ATGCTGACAGGTTTCAAGCAAAAAATACAGTATGCA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGACAAAGGTAGCAAAAGACGAAGCAGGAAGAACTGCTTCAGAAACTGAACATATTGGTAACTCACTGTaGTTGTGCACCTTTAAACAA +
Preference number: 5 (lower is better)
Translates to: KTKVAKDEAGRTASETEHIGNSL*LCTFKQ
Trigger: TTGTTTAAAGGTGCACAACAACAGTGAGTTACCAAT...ATGTTCAGTTTCTGAAGCAGTTCTTCCTGCTTCGTCTTTTGCTACCTTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATTGGTAACTCACTGTaGTTGTGCACCTTTAAACAA +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELIGNSL*LCTFKQ
Trigger: TTGTTTAAAGGTGCACAACAACAGTGAGTTACCAAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCAGAGTTAGAGCTTTGTaGATTGAGATATGTGGAACT +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPRVRAL*IEICGT
Trigger: AGTTCCACATATCTCAATCAACAAAGCTCTAACTCT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCATGAGAGATAGGTTGTaGGGAATATTCAGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGMRDRL*GIFRVN
Trigger: ATTCACCCTGAATATTCCCAACAACCTATCTCTCAT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACATGAGAGATAGGTTGTaGGGAATATTCAGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDMRDRL*GIFRVN
Trigger: ATTCACCCTGAATATTCCCAACAACCTATCTCTCAT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGGTAACATTTCCCCTGTaGTTATTTTTACACATCTGG +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKVTFPL*LFLHIW
Trigger: CCAGATGTGTAAAAATAACAACAGGGGAAATGTTAC...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAGTAACATTTCCCCTGTaGTTATTTTTACACATCTGG +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEVTFPL*LFLHIW
Trigger: CCAGATGTGTAAAAATAACAACAGGGGAAATGTTAC...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAACATTGCCCAAATCAATaGCCCAAATCAATTCAAACA +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEHCPNQ*PKSIQT
Trigger: TGTTTGAATTGATTTGGGCAATTGATTTGGGCAATG...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCAGATCAACACTATaGGGCACCCAGTTATTTGGT +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAIRSTL*GTQLFG
Trigger: ACCAAATAACTGGGTGCCCAATAGTGTTGATCTGAT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCATTAGTTATGTGACCTaGGACAAGTTAGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPISYVT*DKLVKP
Trigger: GGGTTTTACTAACTTGTCCAAGGTCACATAACTAAT...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCCAATAAACACAACTTaGGGGTTTACTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPPINTT*GFTDVF
Trigger: GAAAACATCAGTAAACCCCAAAGTTGTGTTTATTGG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACACATACACACAGACACACACAGAGTTTGCTTATAAGCTCAGGAAGCTTAAAGCCAATAAACACAACTTaGGGGTTTACTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: THTHRHTQSLLISSGSLKPINTT*GFTDVF
Trigger: GAAAACATCAGTAAACCCCAAAGTTGTGTTTATTGG...CTTTAAGCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCTGTGTGTATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCGGATTTATTATCACATaGGCCACAGAACACATAGAA +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPGFIIT*ATEHIE
Trigger: TTCTATGTGTTCTGTGGCCAATGTGATAATAAATCC...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTGCATATACTGAAAATGTCTGTACGAATGAGCTAACTACTATAGGCCTTCCCCAAAAGTACCTATGTTaGCCTAGTTCTCAGATTACA +
Preference number: 5 (lower is better)
Translates to: SAYTENVCTNELTTIGLPQKYLC*PSSQIT
Trigger: TGTAATCTGAGAACTAGGCAAACATAGGTACTTTTG...GGGAAGGCCTATAGTAGTTAGCTCATTCGTACAGACATTTTCAGTATATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTATTCTTAACAAATCTTaGTGGCTGAGAAACCATGAG +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELILNKS*WLRNHE
Trigger: CTCATGGTTTCTCAGCCACAAAGATTTGTTAAGAAT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATAGACACACACAGAGTTaGCTTATAAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYRHTQS*LISSGS
Trigger: GCTTCCTGAGCTTATAAGCAAACTCTGTGTGTGTCT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACCATTGTCAAAAATCATaGCCCATCAAAGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDHCQKS*PIKAVR
Trigger: TCTCACTGCTTTGATGGGCAATGATTTTTGACAATG...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCATTGTCAAAAATCATaGCCCATCAAAGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGHCQKS*PIKAVR
Trigger: TCTCACTGCTTTGATGGGCAATGATTTTTGACAATG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATTTTCCAGTCATTCTaGAGACTGTCAACTCTATGG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAIFQSF*RLSTLW
Trigger: CCATAGAGTTGACAGTCTCAAGAATGACTGGAAAAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGAGCAGGTAAGAAAATaGTTGTTGACTCTCATTAGT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELEQVRK*LLTLIS
Trigger: ACTAATGAGAGTCAACAACAATTTTCTTACCTGCTC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCACTCTTACCACTGATTaGATTGATACTGAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGTLTTD*IDTEPV
Trigger: TACAGGCTCAGTATCAATCAAATCAGTGGTAAGAGT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAAAATGAGAAAACTACTTaGAAGACTGTGCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTENEKTT*KTVLKE
Trigger: TTCCTTCAGCACAGTCTTCAAAGTAGTTTTCTCATT...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTCCCCTTACTCCTTaGATTTTCAGACTAATTTGG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASPLTP*IFRLIW
Trigger: CCAAATTAGTCTGAAAATCAAAGGAGTAAGGGGAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTGGAATTGAATTGGATTaGAGGAGGAAAACCCATATT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELGIELD*RRKTHI
Trigger: AATATGGGTTTTCCTCCTCAAATCCAATTCAATTCC...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAACCTTGGAATTGAATaGGATTTGAGGAGGAAAACC +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDNLGIE*DLRRKT
Trigger: GGTTTTCCTCCTCAAATCCAATTCAATTCCAAGGTT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCATTGAGTCTCTATGGTaGACTATATGCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGIESLW*TICCEG
Trigger: TCCTTCACAGCATATAGTCAACCATAGAGACTCAAT...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAATTGCAGACACAGGTATTAAAGCCATCAAGCATACTGGTTCACCATGTTGCAACTTCGGTGTTTTGTTaGTCCTTAGACAATAGAGAT +
Preference number: 5 (lower is better)
Translates to: KLQTQVLKPSSILVHHVATSVFC*SLDNRD
Trigger: ATCTCTATTGTCTAAGGACAAACAAAACACCGAAGT...TGCAACATGGTGAACCAGTATGCTTGATGGCTTTAATACCTGTGTCTGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GGACTTGGAGTAAATGTGATGAACAGATTAATGAGGTGGAAGGGACTAGAACTTACTTCGGTGTTTTGTTaGTCCTTAGACAATAGAGAT +
Preference number: 5 (lower is better)
Translates to: GLGVNVMNRLMRWKGLELTSVFC*SLDNRD
Trigger: ATCTCTATTGTCTAAGGACAAACAAAACACCGAAGT...AAGTTCTAGTCCCTTCCACCTCATTAATCTGTTCATCACATTTACTCCAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATCTTCTCCACAAATATaGGCTAAAAGCTTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTESSPQI*AKSFSP
Trigger: AGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAGA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAACAGCCTCCATAACATaGCATGTATGGGCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKTASIT*HVWAKE
Trigger: TTCTTTTGCCCATACATGCAATGTTATGGAGGCTGT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACAGCCTCCATAACATaGCATGTATGGGCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATASIT*HVWAKE
Trigger: TTCTTTTGCCCATACATGCAATGTTATGGAGGCTGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATGTTCTTTCAGTTTCTaGCCTAAAATGTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVACSFSF*PKMWSQ
Trigger: CTGTGACCACATTTTAGGCAAGAAACTGAAAGAACA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCTTTCTTGAATCTTTaGATATGTGCCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDAFLNL*ICASSD
Trigger: GTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAGCTTTCTTGAATCTTTaGATATGTGCCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAAFLNL*ICASSD
Trigger: GTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGC...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGCTGAAATATTTTCCTaGGTTCTTTGTGAGGCAACT +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDAEIFS*VLCEAT
Trigger: AGTTGCCTCACAAAGAACCAAGGAAAATATTTCAGC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp AGACACCACTTCTATGAGGAGGTATTCATTGTAGATGTACAGAAGTCAACGGAATTCCTGTTTCTGTCTTaGAGTGGGAATTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: RHHFYEEVFIVDVQKSTEFLFLS*SGNLLL
Trigger: AAGAAGTAAATTCCCACTCAAAGACAGAAACAGGAA...TTCCGTTGACTTCTGTACATCTACAATGAATACCTCCTCATAGAAGTGGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS GCA 90 bp TTGGCTTGCCTTTTTGGCAGATGTTCTACTCTTCATGTCTTAATCTaGTTTGCAACTATCTCTAAACTATCCTTTCCCTCTATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: LACLFGRCSTLHVLI*FATISKLSFPSIRK
Trigger: TTTCCTAATAGAGGGAAAGGATAGTTTAGAGATAGTTGCAAAGCAGATTAAGACATGAAGAGTAGAACATCTGCCAAAAAGGCAAGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000551751.1
ENST00000635762.1
ENST00000647507.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGCATTGTCTCCTTTGTTaGCTAGGCATAACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRHCLLC*LGITFS
Trigger: GGAAAACGTTATGCCTAGCAAACAAAGGAGACAATG...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKARTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATAACATATCCCATCCATaGCTTTCCCTCCAAAAGACA +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYNISHP*LSLQKT
Trigger: TGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGTGTTGATGGATGTATaGTCAAGGAAAAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGVLMDV*SRKKKR
Trigger: TCTCTTCTTTTTCCTTGACAATACATCCATCAACAC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATGGTAACTCACTGTTGTaGTGCACCTTTAAACAACTC +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYGNSLL*CTFKQL
Trigger: GAGTTGTTTAAAGGTGCACAACAACAGTGAGTTACC...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGTAACATTTCCCCTGTaGTTATTTTTACACATCTGG +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDVTFPL*LFLHIW
Trigger: CCAGATGTGTAAAAATAACAACAGGGGAAATGTTAC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTACCAAAATTGTCTTTaGACCCTCTCAGGGAGTCAA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYYQNCL*TLSGSQ
Trigger: TTGACTCCCTGAGAGGGTCAAAAGACAATTTTGGTA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGATACGTACCAAAATaGTCTTTTGACCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRYVPK*SFDPLR
Trigger: CCTGAGAGGGTCAAAAGACAATTTTGGTACGTATCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACACATGACTCATCATaGCCCAAATCAATTGCCCAA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTHDSS*PKSIAQ
Trigger: TTGGGCAATTGATTTGGGCAATGATGAGTCATGTGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAATTAGTTATGTGACCTaGGACAAGTTAGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVAISYVT*DKLVKP
Trigger: GGGTTTTACTAACTTGTCCAAGGTCACATAACTAAT...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGACAAACAGCAGTGGGTaGAAGGCAATGCTGTTTATA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRTNSSG*KAMLFI
Trigger: TATAAACAGCATTGCCTTCAACCCACTGCTGTTTGT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTGCAAGTCAATATGACTaGTTCTGTTTCAGCTATCTG +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKAASQYD*FCFSYL
Trigger: CAGATAGCTGAAACAGAACAAGTCATATTGACTTGC...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGGACACTCTGAACAATaGAACAAGACTACGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRGHSEQ*NKTTLK
Trigger: TTTCAGCGTAGTCTTGTTCAATTGTTCAGAGTGTCC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCGGATTTATTATCACATaGGCCACAGAACACATAGAA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGGFIIT*ATEHIE
Trigger: TTCTATGTGTTCTGTGGCCAATGTGATAATAAATCC...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TACGAGAAAAAGAGCATTGTCTGGTTATCAGAATATCAGATCTCTCATTCTGGCCAAAAGTACCTATGTTaGCCTAGTTCTCAGATTACA +
Preference number: 5 (lower is better)
Translates to: YEKKSIVWLSEYQISHSGQKYLC*PSSQIT
Trigger: TGTAATCTGAGAACTAGGCAAACATAGGTACTTTTG...GCCAGAATGAGAGATCTGATATTCTGATAACCAGACAATGCTCTTTTTCTCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACGAGCAGGTAAGAAAATaGTTGTTGACTCTCATTAGT +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDEQVRK*LLTLIS
Trigger: ACTAATGAGAGTCAACAACAATTTTCTTACCTGCTC...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACAATGAGAAAACTACTTaGAAGACTGTGCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDNEKTT*KTVLKE
Trigger: TTCCTTCAGCACAGTCTTCAAAGTAGTTTTCTCATT...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGACTTAGTGCAATTACACTaGTTAGGGCACAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: FNISHPLLSLQKTKVAKDLVQLH*LGHREY
Trigger: ATATTCTCTGTGCCCTAACAAGTGTAATTGCACTAA...GTCTTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp GTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCATCTTCTCCACAAATATaGGCTAAAAGCTTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: VSFNISHPLLSLQKTKVASSPQI*AKSFSP
Trigger: AGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAGA...TGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGTTCTTTCAGTTTCTaGCCTAAAATGTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKCSFSF*PKMWSQ
Trigger: CTGTGACCACATTTTAGGCAAGAAACTGAAAGAACA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTCCCTTCAGCTTTCTaGAATCTTTTGATATGTGCC +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFPSAF*NLLICA
Trigger: GGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATAGAACATTGTCTCCTTaGTTTGCTAGGCATAACGTT +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYRTLSP*FARHNV
Trigger: AACGTTATGCCTAGCAAACAAAGGAGACAATGTTCT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000548651.5
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATGCATACTGTATTTTTaGCTTGAAACCTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKCILYF*LETCQH
Trigger: ATGCTGACAGGTTTCAAGCAAAAAATACAGTATGCA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAGTGTTGATGGATGTATaGTCAAGGAAAAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKVLMDV*SRKKKR
Trigger: TCTCTTCTTTTTCCTTGACAATACATCCATCAACAC...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATTCAGGGAGTCAAGTTTaGATTTGCTTGAATACAAGC +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYSGSQV*ICLNTS
Trigger: GCTTGTATTCAAGCAAATCAAAACTTGACTCCCTGA...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAACATTGCCCAAATCAATaGCCCAAATCAATTCAAACA +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKHCPNQ*PKSIQT
Trigger: TGTTTGAATTGATTTGGGCAATTGATTTGGGCAATG...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAAATTCTTAACAAATCTTaGTGGCTGAGAAACCATGAG +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKILNKS*WLRNHE
Trigger: CTCATGGTTTCTCAGCCACAAAGATTTGTTAAGAAT...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATCATTGTCAAAAATCATaGCCCATCAAAGCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYHCQKS*PIKAVR
Trigger: TCTCACTGCTTTGATGGGCAATGATTTTTGACAATG...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATATTTTCCAGTCATTCTaGAGACTGTCAACTCTATGG +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYIFQSF*RLSTLW
Trigger: CCATAGAGTTGACAGTCTCAAGAATGACTGGAAAAT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTCTCCCCTTACTCCTTaGATTTTCAGACTAATTTGG +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYSPLTP*IFRLIW
Trigger: CCAAATTAGTCTGAAAATCAAAGGAGTAAGGGGAGA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATATTGAGTCTCTATGGTaGACTATATGCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYIESLW*TICCEG
Trigger: TCCTTCACAGCATATAGTCAACCATAGAGACTCAAT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTACTTCGGTGTTTTGTTaGTCCTTAGACAATAGAGAT +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKATSVFC*SLDNRD
Trigger: ATCTCTATTGTCTAAGGACAAACAAAACACCGAAGT...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp ACCAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTTCTTCTCCACAAATATaGGCTAAAAGCTTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: TRLSFHPTVYSHRCLIKASSPQI*AKSFSP
Trigger: AGGACTAAAGCTTTTAGCCAATATTTGTGGAGAAGA...AGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTGTTCTTTCAGTTTCTaGCCTAAAATGTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRCSFSF*PKMWSQ
Trigger: CTGTGACCACATTTTAGGCAAGAAACTGAAAGAACA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGCTGAAATATTTTCCTaGGTTCTTTGTGAGGCAACT +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRAEIFS*VLCEAT
Trigger: AGTTGCCTCACAAAGAACCAAGGAAAATATTTCAGC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp TCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTAGCAAAATTCCTGTTTCTGTCTTaGAGTGGGAATTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: SFNISHPLLSLQKTKVAKFLFLS*SGNLLL
Trigger: AAGAAGTAAATTCCCACTCAAAGACAGAAACAGGAA...TTTTGCTACCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATACGAGAAAAAGAGCATaGTCTGGTTATCAGAATATC +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYTRKRA*SGYQNI
Trigger: GATATTCTGATAACCAGACAATGCTCTTTTTCTCGT...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATGTGTTGATGGATGTATaGTCAAGGAAAAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYVLMDV*SRKKKR
Trigger: TCTCTTCTTTTTCCTTGACAATACATCCATCAACAC...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATTGGTAACTCACTGTaGTTGTGCACCTTTAAACAA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRIGNSL*LCTFKQ
Trigger: TTGTTTAAAGGTGCACAACAACAGTGAGTTACCAAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGATTAGTTATGTGACCTaGGACAAGTTAGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRISYVT*DKLVKP
Trigger: GGGTTTTACTAACTTGTCCAAGGTCACATAACTAAT...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGGATTTATTATCACATaGGCCACAGAACACATAGAA +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRGFIIT*ATEHIE
Trigger: TTCTATGTGTTCTGTGGCCAATGTGATAATAAATCC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGGAGCAGGTAAGAAAATaGTTGTTGACTCTCATTAGT +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQREQVRK*LLTLIS
Trigger: ACTAATGAGAGTCAACAACAATTTTCTTACCTGCTC...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATAATGAGAAAACTACTTaGAAGACTGTGCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYNEKTT*KTVLKE
Trigger: TTCCTTCAGCACAGTCTTCAAAGTAGTTTTCTCATT...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp AAGCATAAATCTGTCAGGAGAAATCATACGAGAAAAAGAGCATTGTCTGGTTATGGAATTGAATTGGATTaGAGGAGGAAAACCCATATT +
Preference number: 5 (lower is better)
Translates to: KHKSVRRNHTRKRALSGYGIELD*RRKTHI
Trigger: AATATGGGTTTTCCTCCTCAAATCCAATTCAATTCC...ATAACCAGACAATGCTCTTTTTCTCGTATGATTTCTCCTGACAGATTTATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTTTAACATATCCCATCCATTGCTTTCCCTCCAAAAGACAAAGGTTAGTGCAATTACACTaGTTAGGGCACAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: LMFLLTYPIHCFPSKRQRLVQLH*LGHREY
Trigger: ATATTCTCTGTGCCCTAACAAGTGTAATTGCACTAA...CCTTTGTCTTTTGGAGGGAAAGCAATGGATGGGATATGTTAAAAGAAACATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611864.4
ENST00000638103.1
ENST00000644829.1
CDS-3UTR CAA 90 bp CAGATTATCATTCCACCCAACTGTATATTCCCACAGATGCTTAATAAAAGCTATTTCCTGTTTCTGTCTTaGAGTGGGAATTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: QIIIPPNCIFPQMLNKSYFLFLS*SGNLLL
Trigger: AAGAAGTAAATTCCCACTCAAAGACAGAAACAGGAA...ATAGCTTTTATTAAGCATCTGTGGGAATATACAGTTGGGTGGAATGATAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CCA 72 bp CCCATTTTACAGCTGGCAGGTCCTGACCTTCAGGCCTaGCGGCGAGACGGCCATTTCCGGATGGAGACCACA +
Preference number: 6 (lower is better)
Translates to: PILQLAGPDLQA*RRDGHFRMETT
Trigger: TGTGGTCTCCATCCGGAAATGGCCGTCTCGCCGCCAGGCCTGAAGGTCAGGACCTGCCAGCTGTAAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602941.6
ENST00000637408.1
CDS TCA 72 bp GATCCAACAGTGCTCTGTGCAGCCTGGAAGCATGAGTaGTCCTTGGGCCTCACACAAAAGCGAGATAATTGG +
Preference number: 6 (lower is better)
Translates to: DPTVLCAAWKHE*SLGLTQKRDNW
Trigger: CCAATTATCTCGCTTTTGTGTGAGGCCCAAGGATCACTCATGCTTCCAGGCTGCACAGAGCACTGTTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000550365.1
ENST00000552435.6
ENST00000636416.1
ENST00000637621.1
ENST00000642741.1
ENST00000646270.1
CDS CCA 72 bp GACAGATCCACAGCAGCTTTGTGCATACAAGTGATCTaGCTGATCTCCAGTTCTTTTGAAGGCCCCCGTCAT +
Preference number: 6 (lower is better)
Translates to: DRSTAALCIQVI*LISSSFEGPRH
Trigger: ATGACGGGGGCCTTCAAAAGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551921.2
ENST00000637470.1
CDS TCA 72 bp CTGGCAATATCCTCTGATCTATTGCCCGCAAAGCCATaGCTTGATGGAGAGTTTCATTCCCTGGGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: LAISSDLLPAKP*LDGEFHSLGSV
Trigger: AACTGAGCCCAGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS CAA 72 bp TATTTCTTGGAATGTGACAGCTCTCTAGATCCCGGGTaGCATTCTGTTCCCCAGGGATGGCAATCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: YFLECDSSLDPG*HSVPQGWQSGV
Trigger: AACACCAGATTGCCATCCCTGGGGAACAGAATGCAACCCGGGATCTAGAGAGCTGTCACATTCCAAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS CAA 90 bp CAATTTAAATATTTCTTGGAATGTGACAGCTCTCTAGATCCCGGGTaGCATTCTGTTCCCCAGGGATGGCAATCTGGTGTTCCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: QFKYFLECDSSLDPG*HSVPQGWQSGVPVC
Trigger: GCACACAGGAACACCAGATTGCCATCCCTGGGGAACAGAATGCAACCCGGGATCTAGAGAGCTGTCACATTCCAAGAAATATTTAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551921.2
ENST00000637470.1
CDS GCA 72 bp TGTAGAGATAGCCTTTCTCACGCAGAATCAGGGCTGTaGTTTCTGGGTGAGTCAGAGTGGATAAAGCTTCAA +
Preference number: 6 (lower is better)
Translates to: CRDSLSHAESGL*FLGESEWIKLQ
Trigger: TTGAAGCTTTATCCACTCTGACTCACCCAGAAAGCACAGCCCTGATTCTGCGTGAGAAAGGCTATCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS CCA 72 bp CTAAAGTATCACATATCTGAGCTCACAGCAGGGTGGTaGGGTGAACATTATCCCATTTTACAGCTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: LKYHISELTAGW*GEHYPILQLAG
Trigger: ACCTGCCAGCTGTAAAATGGGATAATGTTCACCCCACCACCCTGCTGTGAGCTCAGATATGTGATACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602941.6
ENST00000637408.1
CDS CAA 72 bp TGCAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTaGTGCATACAAGTGATCTGGCTGATCTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: CSSCLKDRSTAA*CIQVIWLISSS
Trigger: GGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS CAA 90 bp GAAAACTGGCAATATCCTCTGATCTATTGCCCGCAAAGCCATGACTaGATGGAGAGTTTCATTCCCTGGGCTCAGTTCTCCAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: ENWQYPLIYCPQSHD*MESFIPWAQFSRRK
Trigger: TTTTCTTCTGGAGAACTGAGCCCAGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS GCA 72 bp AGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTGATCTCCAGTTCCCAT +
Preference number: 6 (lower is better)
Translates to: SSCLKDRSTAAL*IQVIWLISSSH
Trigger: ATGGGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621808.4
ENST00000636626.1
CDS CCA 72 bp CCGCAAAGCCATGACTTGATGGAGAGTTTCATTCCCTaGGCTCAGTTCTCCAGAAGAAAATCAGCACAATTT +
Preference number: 6 (lower is better)
Translates to: PQSHDLMESFIP*AQFSRRKSAQF
Trigger: AAATTGTGCTGATTTTCTTCTGGAGAACTGAGCCCAGGGAATGAAACTCTCCATCAAGTCATGGCTTTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS CCA 72 bp AGTCTAAAGTATCACATATCTGAGCTCACAGCAGGGTaGTGGGGTGAACATTATCCCATTTTACAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SLKYHISELTAG*WGEHYPILQLA
Trigger: TGCCAGCTGTAAAATGGGATAATGTTCACCCCACCACCCTGCTGTGAGCTCAGATATGTGATACTTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602941.6
ENST00000637408.1
CDS CAA 72 bp TGCAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTaGTGCATACAAGTGATCTGGCTGATCTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: CSSCLKDRSTAA*CIQVIWLISSS
Trigger: AGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551921.2
ENST00000637470.1
CDS CAA 72 bp TGCAGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTaGTGCATACAAGTGATCTGGCTGATCTCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: CSSCLKDRSTAA*CIQVIWLISSS
Trigger: TGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602941.6
ENST00000637408.1
CDS GCA 72 bp GAGTGGATAAAGCTTCAACCTTGCTATAGCGTTTTCTaGAGCTCTTGTTTGAAAGACAGATCCACAGCAGCT +
Preference number: 6 (lower is better)
Translates to: EWIKLQPCYSVF*SSCLKDRSTAA
Trigger: AGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTATCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS GCA 72 bp AGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTGATCTCCAGTTCATTG +
Preference number: 6 (lower is better)
Translates to: SSCLKDRSTAAL*IQVIWLISSSL
Trigger: CAATGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602941.6
ENST00000637408.1
CDS CAA 90 bp TGGATAAAGCTTCAACCTTGCTATAGCGTTTTCTGCAGCTCTTGTTaGAAAGACAGATCCACAGCAGCTTTGTGCATACAAGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: WIKLQPCYSVFCSSC*KDRSTAALCIQVIW
Trigger: CCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS GCA 72 bp AGCTCTTGTTTGAAAGACAGATCCACAGCAGCTTTGTaGATACAAGTGATCTGGCTGATCTCCAGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SSCLKDRSTAAL*IQVIWLISSSF
Trigger: AAAAGAACTGGAGATCAGCCAGATCACTTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551921.2
ENST00000637470.1
CDS GCA 72 bp TTTCTGGGTGAGTCAGAGTGGATAAAGCTTCAACCTTaGTATAGCGTTTTCTGCAGCTCTTGTTTGAAAGAC +
Preference number: 6 (lower is better)
Translates to: FLGESEWIKLQP*YSVFCSSCLKD
Trigger: GTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCAAGGTTGAAGCTTTATCCACTCTGACTCACCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS GCA 72 bp AATCTTCCCTTCAGCTTTCTTGAATCTTTTGATATGTaGCTCTTCAGACCTCTTTCCTCTGTCTACCTGTCC +
Preference number: 6 (lower is better)
Translates to: NLPFSFLESFDM*LFRPLSSVYLS
Trigger: GGACAGGTAGACAGAGGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CAA 72 bp CTTCAACCTTGCTATAGCGTTTTCTGCAGCTCTTGTTaGAAAGACAGATCCACAGCAGCTTTGTGCATACAA +
Preference number: 6 (lower is better)
Translates to: LQPCYSVFCSSC*KDRSTAALCIQ
Trigger: TTGTATGCACAAAGCTGCTGTGGATCTGTCTTTCAAACAAGAGCTGCAGAAAACGCTATAGCAAGGTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000551921.2
ENST00000602941.6
ENST00000621808.4
ENST00000636626.1
ENST00000637408.1
ENST00000637470.1
CDS TCA 72 bp ATTCTCTTCTTTGAAGCTTTCGTCTTCACTTCTGGTTaGTTGATGGATGAGCCATTGGTGATTTCGACTCCT +
Preference number: 6 (lower is better)
Translates to: ILFFEAFVFTSG*LMDEPLVISTP
Trigger: AGGAGTCGAAATCACCAATGGCTCATCCATCAATCAACCAGAAGTGAAGACGAAAGCTTCAAAGAAGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CCA 72 bp GCAATAATATGGTGCGCAAATTTCTGTGTAATATCCTaGACCATGGCATCACGCCAGGAAGAATTAAAGTCT +
Preference number: 6 (lower is better)
Translates to: AIIWCANFCVIS*TMASRQEELKS
Trigger: AGACTTTAATTCTTCCTGGCGTGATGCCATGGTCCAGGATATTACACAGAAATTTGCGCACCATATTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000547225.5
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636470.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000643627.1
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS CCA 72 bp GAAAACCTGCCCGATAACAATAATCCATTAGAAAACTaGCAATATCCTCTGATCTATTGCCCGCAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: ENLPDNNNPLEN*QYPLIYCPQSH
Trigger: ATGGCTTTGCGGGCAATAGATCAGAGGATATTGCCAGTTTTCTAATGGATTATTGTTATCGGGCAGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551921.2
ENST00000621808.4
ENST00000636626.1
ENST00000637470.1
CDS CAA 90 bp ATCCTTTTACTACCTTCAATCTTCCCTTCAGCTTTCTTGAATCTTTaGATATGTGCCTCTTCAGACCTCTTTCCTCTGTCTACCTGTCCT +
Preference number: 6 (lower is better)
Translates to: ILLLPSIFPSAFLNL*ICASSDLFPLSTCP
Trigger: AGGACAGGTAGACAGAGGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAAGATTGAAGGTAGTAAAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CAA 90 bp TCCTCCTTCATCCTTTTACTACCTTCAATCTTCCCTTCAGCTTTCTaGAATCTTTTGATATGTGCCTCTTCAGACCTCTTTCCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSFILLLPSIFPSAF*NLLICASSDLFPLS
Trigger: AGACAGAGGAAAGAGGTCTGAAGAGGCACATATCAAAAGATTCAAGAAAGCTGAAGGGAAGATTGAAGGTAGTAAAAGGATGAAGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CAA 90 bp ATACTCCACTTCCTTTCTTGTGGTCATGGTTTTGTTAAGGATAATTaGAGACTTCAGGATCTCTTTGGGAAACTGAAGATTTTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: ILHFLSCGHGFVKDN*RLQDLFGKLKIFPK
Trigger: CTTCGGGAAAATCTTCAGTTTCCCAAAGAGATCCTGAAGTCTCAAATTATCCTTAACAAAACCATGACCACAAGAAAGGAAGTGGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1
CDS CCA 72 bp GGAGCATGTATAACCATTAATCTTCCTGCAATAATATaGTGCGCAAATTTCTGTGTAATATCCTGGACCATG +
Preference number: 6 (lower is better)
Translates to: GACITINLPAII*CANFCVISWTM
Trigger: CATGGTCCAGGATATTACACAGAAATTTGCGCACCATATTATTGCAGGAAGATTAATGGTTATACATGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000547225.5
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636470.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000643627.1
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS GCA 72 bp CCAAAAGTACTCATCAACACTACTGTAAGCCTTGCTTaGTTCATAATTTTCAAACACATTCATGTTGGTGTA +
Preference number: 6 (lower is better)
Translates to: PKVLINTTVSLA*FIIFKHIHVGV
Trigger: TACACCAACATGAATGTGTTTGAAAATTATGAAGCAAGCAAGGCTTACAGTAGTGTTGATGAGTACTTTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000547225.5
ENST00000548651.5
ENST00000552808.6
ENST00000611864.4
ENST00000620241.4
ENST00000621808.4
ENST00000636211.1
ENST00000636470.1
ENST00000636626.1
ENST00000637362.1
ENST00000637661.1
ENST00000638103.1
ENST00000643295.2
ENST00000643627.1
ENST00000644829.1
ENST00000645144.1
ENST00000646486.1
ENST00000646655.1
CDS CAA 72 bp TTCCTTTCTTGTGGTCATGGTTTTGTTAAGGATAATTaGAGACTTCAGGATCTCTTTGGGAAACTGAAGATT +
Preference number: 6 (lower is better)
Translates to: FLSCGHGFVKDN*RLQDLFGKLKI
Trigger: AATCTTCAGTTTCCCAAAGAGATCCTGAAGTCTCAAATTATCCTTAACAAAACCATGACCACAAGAAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000620241.4
ENST00000637661.1
ENST00000645144.1