RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT4A (Homo sapiens)

Ensembl gene IDs: ENSG00000071073

Ensembl transcript IDs: ENST00000264968.7, ENST00000393487.6, ENST00000409391.1, ENST00000414521.6, ENST00000460768.1, ENST00000461884.1, ENST00000484936.5, ENST00000492163.5, ENST00000495056.2

Found 544 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGGAACCTTGCCCCAGCGCTAGGCCCCAGCCAGTGGTCACTCTaGAAGCTCAGCAGAATCCATCTCTGCCCGTCTGCAACCAACCTG +
Preference number: 1 (lower is better)
Translates to: SWNLAPALGPSQWSL*KLSRIHLCPSATNL
Trigger: CAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGAGCTTTCAGAGTGACCACTGGCTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 90 bp GAAAGAGGAGGGCAGGCTGGAATAATTGGTCTCACATCCAGATGCTaGCTGGCCACCTGCCACGTGCCTGGCACACACCCTAGGCACGGG +
Preference number: 1 (lower is better)
Translates to: ERGGQAGIIGLTSRC*LATCHVPGTHPRHG
Trigger: CCCGTGCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCAGTCAGCATCTGGATGTGAGACCAATTATTCCAGCCTGCCCTCCTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp TCTGAAAGCTCAGCAGAATCCATCTCTGCCCGTCTGCAACCAACCTaGAACCCACTTGTGGCACCCCAGTGTGTCCAAGCAGACTGGCTG +
Preference number: 1 (lower is better)
Translates to: SESSAESISARLQPT*NPLVAPQCVQADWL
Trigger: CAGCCAGTCTGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGAGCTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp CCAGTGGTCACTCTGAAAGCTCAGCAGAATCCATCTCTGCCCGTCTaGAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAAG +
Preference number: 1 (lower is better)
Translates to: PVVTLKAQQNPSLPV*NQPATHLWHPSVSK
Trigger: CTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGAGCTTTCAGAGTGACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 90 bp CAGAATCCATCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTaGCACCCCAGTGTGTCCAAGCAGACTGGCTGGGAACTGATGTTG +
Preference number: 1 (lower is better)
Translates to: QNPSLPVCNQPATHL*HPSVSKQTGWELML
Trigger: CAACATCAGTTCCCAGCCAGTCTGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp CCAAGGCCTCTCTCAGCTCCTCAAAGCCATGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAAACAGCAATGGTGCCTGAGGTCCTT +
Preference number: 1 (lower is better)
Translates to: PRPLSAPQSHVHSFS*SPLYLKTAMVPEVL
Trigger: AAGGACCTCAGGCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAGCTGAGAGAGGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 90 bp CTGCTCTTAAGGGCGACCACTACAATTTCCTGCTTGGGGAAAGGATaGCTGCTTCTACTAGTTGAGTGCAGAACTGGGCAGAAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: LLLRATTTISCLGKG*LLLLVECRTGQKGG
Trigger: CCCTCCTTTCTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGTCGCCCTTAAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 90 bp ATGATGCTATTTCATGCTGTTGGTTCAGCACATTGGGTAACTAGATaGAGCTCCTCCAGGCTAGAGGCAGCCAGCTGGAACCTTGCCCCA +
Preference number: 1 (lower is better)
Translates to: MMLFHAVGSAHWVTR*SSSRLEAASWNLAP
Trigger: TGGGGCAAGGTTCCAGCTGGCTGCCTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATGTGCTGAACCAACAGCATGAAATAGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp TCCTTTGCTGTTAGCCAAGGCCTCTCTCAGCTCCTCAAAGCCATGTaGATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGG +
Preference number: 1 (lower is better)
Translates to: SFAVSQGLSQLLKAM*IPSHAAPSTLKQQW
Trigger: CCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAGCTGAGAGAGGCCTTGGCTAACAGCAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 90 bp AGAGGACAGATGAGCAGTATGAGCTGCAGGCTCGCCTCAGGAACCTaGAATCTGGTCAGAGAGACAGCACACACCATACACACAAACAAT +
Preference number: 1 (lower is better)
Translates to: RGQMSSMSCRLASGT*NLVRETAHTIHTNN
Trigger: ATTGTTTGTGTGTATGGTGTGTGCTGTCTCTCTGACCAGATTTCAGGTTCCTGAGGCGAGCCTGCAGCTCATACTGCTCATCTGTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp TCTTCTGCCCTCACACTGCTCTTAAGGGCGACCACTACAATTTCCTaGTTGGGGAAAGGATGGCTGCTTCTACTAGTTGAGTGCAGAACT +
Preference number: 1 (lower is better)
Translates to: SSALTLLLRATTTIS*LGKGWLLLLVECRT
Trigger: AGTTCTGCACTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGTCGCCCTTAAGAGCAGTGTGAGGGCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp GGTACAACCTGGCAAGGAGATTCCTCAGGCAGCTTCTCTAAGGGATaGTTCCAGAAACATCCCCTAATGCAGACAACCTTTCCAAAGTGT +
Preference number: 1 (lower is better)
Translates to: GTTWQGDSSGSFSKG*FQKHPLMQTTFPKC
Trigger: ACACTTTGGAAAGGTTGTCTGCATTAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCTGCCTGAGGAATCTCCTTGCCAGGTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 90 bp TCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTTGAATaGGGTCTTCTAAATTCTCAGCTCAGATGCACCCTGGAGTGCCAG +
Preference number: 1 (lower is better)
Translates to: SRKVLSHQCSVYFLE*GLLNSQLRCTLECQ
Trigger: CTGGCACTCCAGGGTGCATCTGAGCTGAGAATTTAGAAGACCTCATTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR GCA 90 bp TGGCAACTGAGGAACCAGGGACCCAAGAGTACTCCTAAGCCCACCTaGAGAGATTTTTACTTCTGGTACTCAGTTATCTTTGCAGTAATT +
Preference number: 1 (lower is better)
Translates to: WQLRNQGPKSTPKPT*RDFYFWYSVIFAVI
Trigger: AATTACTGCAAAGATAACTGAGTACCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGTACTCTTGGGTCCCTGGTTCCTCAGTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp TTCATAATTAGCACTCTGGACACAGTACTGTTCAACAGAGCTTTCTaGAGTGATGGAAAAGTTCTGCATCCGTGGTGTCAAGTGTGGTGG +
Preference number: 1 (lower is better)
Translates to: FIISTLDTVLFNRAF*SDGKVLHPWCQVWW
Trigger: CCACCACACTTGACACCACGGATGCAGAACTTTTCCATCACTGCAGAAAGCTCTGTTGAACAGTACTGTGTCCAGAGTGCTAATTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 90 bp AATAACTTTCTCCTCCCTAGATTTTCAGAGCATGGTCTTTCTTCATaGAACCAGAGTTGGCAACTGAGGAACCAGGGACCCAAGAGTACT +
Preference number: 1 (lower is better)
Translates to: NNFLLPRFSEHGLSS*NQSWQLRNQGPKST
Trigger: AGTACTCTTGGGTCCCTGGTTCCTCAGTTGCCAACTCTGGTTTCATGAAGAAAGACCATGCTCTGAAAATCTAGGGAGGAGAAAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 90 bp TACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTTaGATGAGGTCTTCTAAATTCTCAGCTCAGATGCACCCTGGAGTG +
Preference number: 1 (lower is better)
Translates to: YFAQSAFPSMLSLLS*MRSSKFSAQMHPGV
Trigger: CACTCCAGGGTGCATCTGAGCTGAGAATTTAGAAGACCTCATTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 90 bp TTTGTGTTAACTTTTTCCAAAGCTTTTCAATCACACTGTCTGTTCTaGCTACACAGTATGGTACAGCGCGTGATGTGGAGAATGCATGAG +
Preference number: 1 (lower is better)
Translates to: FVLTFSKAFQSHCLF*LHSMVQRVMWRMHE
Trigger: CTCATGCATTCTCCACATCACGCGCTGTACCATACTGTGTAGTCAGAACAGACAGTGTGATTGAAAAGCTTTGGAAAAAGTTAACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 90 bp ATTTTGACTGCAACATTAACAGTGGGAATGTTACTTCGCGCAAAGTaGTTTCCCATCAATGCTCAGTTTACTTTCTTGAATGAGGTCTTC +
Preference number: 1 (lower is better)
Translates to: ILTATLTVGMLLRAK*FPINAQFTFLNEVF
Trigger: GAAGACCTCATTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACTGTTAATGTTGCAGTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 90 bp CCTGTTTGTTCCTTTGAAAATGATCTAGTTAGTGCCCAAACCGGGTaGAGGAGTGTTTCAGGTAAGAAGAAGAGTTTATATATAGGTGTT +
Preference number: 1 (lower is better)
Translates to: PVCSFENDLVSAQTG*RSVSGKKKSLYIGV
Trigger: AACACCTATATATAAACTCTTCTTCTTACCTGAAACACTCCTTCACCCGGTTTGGGCACTAACTAGATCATTTTCAAAGGAACAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 90 bp GTTAAGTCTACAATAATCTGGGTTGAATGCATCACACTTACACATTaGAAATTTATCAGACTGACTTTCTGTGGCTATACACCATACACA +
Preference number: 1 (lower is better)
Translates to: VKSTIIWVECITLTH*KFIRLTFCGYTPYT
Trigger: TGTGTATGGTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTCAATGTGTAAGTGTGATGCATTCAACCCAGATTATTGTAGACTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 90 bp CAGCAGAATCCATCTCTGCCCGTCTGCAACCAACCTGCAACCCACTaGTGGCACCCCAGTGTGTCCAAGCAGACTGGCTGGGAACTGATG +
Preference number: 2 (lower is better)
Translates to: QQNPSLPVCNQPATH*WHPSVSKQTGWELM
Trigger: CATCAGTTCCCAGCCAGTCTGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGCCAGCTGGAACCTTaGCCCAGCGCTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSQLEP*PSARPQ
Trigger: CTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCTGGCT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTGGCCACCTGCCACGTaGCTGGCACACACCCTAGGC +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCWPPAT*LAHTLG
Trigger: GCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 90 bp CTGAATTCAGTTCCCGTGGCTGTAGGACTGCAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCTCTCAGCTCCTCAAAGCCATGTGCA +
Preference number: 2 (lower is better)
Translates to: LNSVPVAVGLQFPAP*LLAKASLSSSKPCA
Trigger: TGCACATGGCTTTGAGGAGCTGAGAGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTGCAGTCCTACAGCCACGGGAACTGAATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGGCTGCAGTGAGCTATaGGAGCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCGCSEL*EHHCTP
Trigger: TGGAGTGCAGTGGTGCTCTCATAGCTCACTGCAGCC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 90 bp TCTGCCCTCACACTGCTCTTAAGGGCGACCACTACAATTTCCTGCTaGGGGAAAGGATGGCTGCTTCTACTAGTTGAGTGCAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: SALTLLLRATTTISC*GKGWLLLLVECRTG
Trigger: CCCAGTTCTGCACTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGTCGCCCTTAAGAGCAGTGTGAGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCTTTCCAAGTGGAAATaGCAATCGTCTTATCTACAG +
Preference number: 2 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSLSKWK*QSSYLQ
Trigger: CTGTAGATAAGACGATTGTCATTTCCACTTGGAAAG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGCAGAATCCATCTCTaGCCGTCTGCAACCAACCTG +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSRIHL*PSATNL
Trigger: CAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTGGCCACCTGCCACGTaGCTGGCACACACCCTAGGC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFWPPAT*LAHTLG
Trigger: GCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCTACAATAATCTGGGTTaGATGCATCACACTTACACA +
Preference number: 2 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSYNNLG*MHHTYT
Trigger: TGTGTAAGTGTGATGCATTCAACCCAGATTATTGTA...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGCCAGTGGTCACTCTaGAAGCTCAGCAGAATCCAT +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSQWSL*KLSRIH
Trigger: ATGGATTCTGCTGAGCTTTCAGAGTGACCACTGGCT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCATTGGGTAACTAGATaGAGCTCCTCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCHWVTR*SSSRLE
Trigger: CTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAGCCAGCTGGAACCTTaGCCCAGCGCTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAASQLEP*PSARPQ
Trigger: CTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCTGGCT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTGTGTCCAAGCAGACTaGCTGGGAACTGATGTTGAT +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCCVQAD*LGTDVD
Trigger: ATCAACATCAGTTCCCAGCCAGTCTGCTTGGACACA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCACTATTTTGGTAAAATaGTTCGGCGCCCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCTILVK*FGALSR
Trigger: CCTTGAGAGGGCGCCGAATCATTTTACCAAAATAGT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCGTCTGCAACCAACCTaGAACCCACTTGTGGCACCC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFRLQPT*NPLVAP
Trigger: GGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCTTCTACTAGTTGAGTaGAGAACTGGGCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCLLLVE*RTGQKG
Trigger: TCCTTTCTGCCCAGTTCTGCACTCAACTAGTAGAAG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTCCAAGCAGACTGGCTaGGAACTGATGTTGATACTT +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSKQTG*ELMLIL
Trigger: AAGTATCAACATCAGTTCCCAGCCAGTCTGCTTGGA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCCTGCAACCCACTTGTaGCACCCCAGTGTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFPATHL*HPSVSK
Trigger: CTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 90 bp CAGGTTCCACCCATGCTCAAAGTGGGAGGATATTATACAAGGTCATaGGTGGGGGTGTCAGTAGGGGTCATTCTTAGAAATTTGCCTACC +
Preference number: 2 (lower is better)
Translates to: QVPPMLKVGGYYTRS*VGVSVGVILRNLPT
Trigger: GGTAGGCAAATTTCTAAGAATGACCCCTACTGACACCCCCACCAATGACCTTGTATAATATCCTCCCACTTTGAGCATGGGTGGAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACCAGAGTTGGCAACTaGGGAACCAGGGACCCAAGA +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTRVGN*GTRDPR
Trigger: TCTTGGGTCCCTGGTTCCTCAGTTGCCAACTCTGGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTCTTGGGAACAAGAATaGGTTTCTTGGGAACAACAG +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSWEQE*VSWEQQ
Trigger: CTGTTGTTCCCAAGAAACTCATTCTTGTTCCCAAGA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGATCGAGGCTGCAGTaGGCTATGAGAGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFRSRLQ*AMRAPL
Trigger: CAGTGGTGCTCTCATAGCTCACTGCAGCCTCGATCT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCATCCAGATGCTGACTaGCCACCTGCCACGTGCCTG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKHPDAD*PPATCL
Trigger: CAGGCACGTGGCAGGTGGCCAGTCAGCATCTGGATG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGAGAGAAAGGGGGCTaGACATGGTGGCACACACCT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFREKGG*TWWHTP
Trigger: AGGTGTGTGCCACCATGTCCAGCCCCCTTTCTCTCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTGGTGTCAAGTGTGGTaGCCACTAGCTCCACATGGC +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFWCQVW*PLAPHG
Trigger: GCCATGTGGAGCTAGTGGCCACCACACTTGACACCA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGCTCAGATGCACCCTaGAGTGCCAGCTTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSSDAP*SASLLL
Trigger: AAGGAGCAAGCTGGCACTCCAGGGTGCATCTGAGCT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAACAGTGAGAGGCCCTaGGCACCCACCATAGGAGAG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKNSERP*APTIGE
Trigger: CTCTCCTATGGTGGGTGCTCAGGGCCTCTCACTGTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCCAAGCAGGCTTAAGTaGGTTCTCGGCTTAGGGTCT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFPSRLK*VLGLGS
Trigger: AGACCCTAAGCCGAGAACTCACTTAAGCCTGCTTGG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCTCACTGCCAGCTCTaGCTCCTGGGTTCACGCCAT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIAHCQL*LLGSRH
Trigger: ATGGCGTGAACCCAGGAGGCAGAGCTGGCAGTGAGC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCGTCTGCAACCAACCTaGAACCCACTTGTGGCACCC +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKRLQPT*NPLVAP
Trigger: GGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCAACAGGTGGACCAATaGTGGGAGGGCAAACTGCAT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFQQVDQ*WEGKLH
Trigger: ATGCAGTTTGCCCTCCCAGCATTGGTCCACCTGTTG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCATAAATACAGTCTCTTaGACACGGGACTCACTTATC +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCINTVS*TRDSLI
Trigger: GATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTAT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTAGAGGCAGCCAGCTaGAACCTTGCCCCAGCGCTA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILEAAS*NLAPAL
Trigger: TAGCGCTGGGGCAAGGTTCCAGCTGGCTGCCTCTAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCATTCCTGTTTTTGAATaGAATTTGCTCATGGGCACT +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCIPVFE*NLLMGT
Trigger: AGTGCCCATGAGCAAATTTCATTCAAAAACAGGAAT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGCTGCTTCTACTAGTTaGGTGCAGAACTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFAASTS*VQNWAE
Trigger: TTCTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCACCATCTCCAATTGTTaGACAAATACACACATACGT +
Preference number: 2 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCTISNC*TNTHIR
Trigger: ACGTATGTGTGTATTTGTTCAACAATTGGAGATGGT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCATCTCTGCCCGTCTaGAACCAACCTGCAACCCAC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPSLPV*NQPATH
Trigger: GTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAATTCTCAGCTCAGATaGACCCTGGAGTGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFNSQLR*TLECQL
Trigger: AAGCTGGCACTCCAGGGTGCATCTGAGCTGAGAATT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCTTGGGAACAACAGGTaGACCAATGCTGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKLGNNR*TNAGRA
Trigger: TGCCCTCCCAGCATTGGTCCACCTGTTGTTCCCAAG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGTGTATGCAAGAGTATaGCAACGACAGCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFVYARV*QRQQGE
Trigger: CTCTCCCTGCTGTCGTTGCCATACTCTTGCATACAC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAACCAGTCTTTTCTTTaGGGGACAGCACTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNQSFL*GTALLG
Trigger: TCCCAACAGTGCTGTCCCTCAAAGAAAAGACTGGTT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAA +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVHSFS*SPLYLK
Trigger: TTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAA +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFVHSFS*SPLYLK
Trigger: TTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCAC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAAGAGGAGGGCAGGCTaGAATAATTGGTCTCACATC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFKRRAG*NNWSHI
Trigger: GATGTGAGACCAATTATTCCAGCCTGCCCTCCTCTT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGCTCAGATGCACCCTaGAGTGCCAGCTTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISSDAP*SASLLL
Trigger: AAGGAGCAAGCTGGCACTCCAGGGTGCATCTGAGCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCATGGTCTTTCTTCATaGAACCAGAGTTGGCAACTG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFHGLSS*NQSWQL
Trigger: CAGTTGCCAACTCTGGTTTCATGAAGAAAGACCATG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCACTATTTTGGTAAAATaGTTCGGCGCCCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFTILVK*FGALSR
Trigger: CCTTGAGAGGGCGCCGAATCATTTTACCAAAATAGT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTCACACTGTCTGTTCTaGCTACACAGTATGGTACAG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFSHCLF*LHSMVQ
Trigger: CTGTACCATACTGTGTAGTCAGAACAGACAGTGTGA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AAACAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTGATTGCCAGGGTATTTaGCCTAAGCATTTAGGCACC +
Preference number: 2 (lower is better)
Translates to: KQAPLELEILCPLSKNTVDCQGI*PKHLGT
Trigger: GGTGCCTAAATGCTTAGGTCAAATACCCTGGCAATC...AACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
3UTR-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCACTCCTAAGCCCACCTaGAGAGATTTTTACTTCTGG +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFTPKPT*RDFYFW
Trigger: CCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGGCTGGGTCTTATCTaGAGACTGGAGATGAATGCC +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKRLGLI*RLEMNA
Trigger: GGCATTCATCTCCAGTCTCCAGATAAGACCCAGCCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR CAA 90 bp GAGATCTCTGGCGAGAACATCCCCAACAAGGTCCAGGTACATGACTaGCTACTAAAGACTTTATTCATGCATTTACCAAGAAATATCCAG +
Preference number: 2 (lower is better)
Translates to: EISGENIPNKVQVHD*LLKTLFMHLPRNIQ
Trigger: CTGGATATTTCTTGGTAAATGCATGAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTCGCCAGAGATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGTATGGTACAGCGCGTaGTGTGGAGAATGCATGAGA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIVWYSA*CGECMR
Trigger: TCTCATGCATTCTCCACATCACGCGCTGTACCATAC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCCAATGAAGACTAATTaGGATCTCTGGCGAGAACAT +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFPMKTN*DLWREH
Trigger: ATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAACTCCTAAGCCCACCTaGAGAGATTTTTACTTCTGG +
Preference number: 2 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAATPKPT*RDFYFW
Trigger: CCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTTAAAACAGCAATGGTaGCTGAGGTCCTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLKQQW*LRSFCF
Trigger: AAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGCTATTTCATGCTGTTaGTTCAGCACATTGGGTAAC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFAISCC*FSTLGN
Trigger: GTTACCCAATGTGCTGAACCAACAGCATGAAATAGC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCAGGCTGGAATAATTaGTCTCACATCCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKAGWNN*SHIQML
Trigger: CAGCATCTGGATGTGAGACCAATTATTCCAGCCTGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGAGGGACAGCACTGTTaGGAGACAACCTCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKEGQHC*ETTSFS
Trigger: TGAAAAAGAGGTTGTCTCCCAACAGTGCTGTCCCTC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCACCCATGCTCAAAGTaGGAGGATATTATACAAGGT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFHPCSK*EDIIQG
Trigger: ACCTTGTATAATATCCTCCCACTTTGAGCATGGGTG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGGCTGGGTCTTATCTaGAGACTGGAGATGAATGCC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIRLGLI*RLEMNA
Trigger: GGCATTCATCTCCAGTCTCCAGATAAGACCCAGCCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTACAAACATTTGGCTaGCCCATACAGGATTTGATC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLQTFG*PIQDLI
Trigger: GATCAAATCCTGTATGGGCCAGCCAAATGTTTGTAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACAGAGCTTTCTGCAGTaGTGGAAAAGTTCTGCATCC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIQSFLQ*WKSSAS
Trigger: GGATGCAGAACTTTTCCATCACTGCAGAAAGCTCTG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGTGCAACCACTGATTTaGGAAGATACACACTTTGTT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFVQPLI*EDTHFV
Trigger: AACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCAC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAACCAGTCTTTTCTTTaGGGGACAGCACTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIINQSFL*GTALLG
Trigger: TCCCAACAGTGCTGTCCCTCAAAGAAAAGACTGGTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACAGGGAATCAAGTATaGAGATTTCCTCTTTACCTC +
Preference number: 2 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTGNQV*RFPLYL
Trigger: GAGGTAAAGAGGAAATCTTCATACTTGATTCCCTGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAATCACACCAGGTGCTaGAATAACTTTCTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKNHTRC*NNFLLP
Trigger: AGGGAGGAGAAAGTTATTGCAGCACCTGGTGTGATT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACCACTACAATTTCCTaGTTGGGGAAAGGATGGCTG +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITTTIS*LGKGWL
Trigger: CAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTTACTTCGCGCAAAGTaGTTTCCCATCAATGCTCAG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKLLRAK*FPINAQ
Trigger: CTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCATAAATACAGTCTCTTaGACACGGGACTCACTTATC +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFINTVS*TRDSLI
Trigger: GATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTAT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGGCTGGAATAATTaGTCTCACATCCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIAGWNN*SHIQML
Trigger: CAGCATCTGGATGTGAGACCAATTATTCCAGCCTGC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTGGCCACTGAGTACTTaGAATGTCACTAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKWPLST*NVTSVC
Trigger: ACACACACTAGTGACATTCCAAGTACTCAGTGGCCA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGTACAGCGCGTGATGTaGAGAATGCATGAGACTAAG +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIVQRVM*RMHETK
Trigger: CTTAGTCTCATGCATTCTCCACATCACGCGCTGTAC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACTTTCCAAGTGGAAATaGCAATCGTCTTATCTACAG +
Preference number: 2 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALSKWK*QSSYLQ
Trigger: CTGTAGATAAGACGATTGTCATTTCCACTTGGAAAG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGAAAATTTATCAGACTaGCTTTCTGTGGCTATACAC +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFENLSD*LSVAIH
Trigger: GTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAATCACACCAGGTGCTaGAATAACTTTCTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIINHTRC*NNFLLP
Trigger: AGGGAGGAGAAAGTTATTGCAGCACCTGGTGTGATT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGACAACCGATTGTGTATaGAAGAGTATGGCAACGACA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKTTDCV*KSMATT
Trigger: TGTCGTTGCCATACTCTTGCATACACAATCGGTTGT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTTCTACTAGTTGAGTaGAGAACTGGGCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILLLVE*RTGQKG
Trigger: TCCTTTCTGCCCAGTTCTGCACTCAACTAGTAGAAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCGCTACTCAGTAAGATaGTGCAACTTTGCCAACAAA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKRYSVR*CNFANK
Trigger: TTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGCTTCTCTAAGGGATaGTTCCAGAAACATCCCCTA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISFSKG*FQKHPL
Trigger: TAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCTATTTCATGCTGTTaGTTCAGCACATTGGGTAAC +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKAISCC*FSTLGN
Trigger: GTTACCCAATGTGCTGAACCAACAGCATGAAATAGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAATGAAATTTGCTCATaGGCACTGGGCCAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKNEICS*ALGQGN
Trigger: ATTTCCTTGGCCCAGTGCCCATGAGCAAATTTCATT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAAGTACCAAACCCTTaGTTCCAGGACAGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKKVPNP*FQDSLL
Trigger: TAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR CAA 90 bp AATGCTAATCAGGCAAAAGTACCAAACCCTTGGTTCCAGGACAGTTaGCTAATTACTAATACAATGAAACAACTAGGAGCAAGTGACACA +
Preference number: 2 (lower is better)
Translates to: NANQAKVPNPWFQDS*LITNTMKQLGASDT
Trigger: TGTGTCACTTGCTCCTAGTTGTTTCATTGTATTAGTAATTAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTTGCCTGATTAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACACAGCACAGGAAATaGTGCTATTTCATGCTGTTG +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITQHRK*CYFMLL
Trigger: CAACAGCATGAAATAGCATCATTTCCTGTGCTGTGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGATACACAGATTATCTaGTCTCTACAAGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKDTQII*SLQGKG
Trigger: ACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAATGATGCTATTTCATaGTGTTGGTTCAGCACATTG +
Preference number: 2 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANDAIS*CWFSTL
Trigger: CAATGTGCTGAACCAACAGCATGAAATAGCATCATT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTTCAACAGAGCTTTCTaGAGTGATGGAAAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKFNRAF*SDGKVL
Trigger: CAGAACTTTTCCATCACTGCAGAAAGCTCTGTTGAA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAGATGCTGCAACTTTaGCAACAAACGTCCAATGAA +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKKMLQL*QQTSNE
Trigger: TTCATTGGACGTTTGTTGGCAAAGTTGCAGCATCTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAAGTCTACAATAATCTaGGTTGAATGCATCACACTT +
Preference number: 2 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFKSTII*VECITL
Trigger: AAGTGTGATGCATTCAACCCAGATTATTGTAGACTT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAATGAAATTTGCTCATaGGCACTGGGCCAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIINEICS*ALGQGN
Trigger: ATTTCCTTGGCCCAGTGCCCATGAGCAAATTTCATT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACACCCATGCTCAAAGTaGGAGGATATTATACAAGGT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIHPCSK*EDIIQG
Trigger: ACCTTGTATAATATCCTCCCACTTTGAGCATGGGTG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAAAGTACCAAACCCTTaGTTCCAGGACAGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIKVPNP*FQDSLL
Trigger: TAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGTGCAACCACTGATTTaGGAAGATACACACTTTGTT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIVQPLI*EDTHFV
Trigger: AACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCAC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGACACCTTCTAATTATTaGCTAGTGCAACCACTGATT +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKTPSNY*LVQPLI
Trigger: AATCAGTGGTTGCACTAGTCAATAATTAGAAGGTGT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACAGGGAATCAAGTATaGAGATTTCCTCTTTACCTC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITGNQV*RFPLYL
Trigger: GAGGTAAAGAGGAAATCTTCATACTTGATTCCCTGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGACTAAGGTATGGTTATaGCTCACATTTCTCATCTTC +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKTKVWL*LTFLIF
Trigger: GAAGATGAGAAATGTGAGTCATAACCATACCTTAGT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCTGCCTACACTGAAATaGAAAGTATCAAATCTACTG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKLPTLK*KVSNLL
Trigger: CAGTAGATTTGATACTTTTCATTTCAGTGTAGGCAG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTTTCCAAAGTGTTCTaGATGGGACACTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILSKVF*MGHFSF
Trigger: AAAACTGAAGTGTCCCATTCAGAACACTTTGGAAAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAATGATGCTATTTCATaGTGTTGGTTCAGCACATTG +
Preference number: 2 (lower is better)
Translates to: FFISNTHERSWHRETVMKNDAIS*CWFSTL
Trigger: CAATGTGCTGAACCAACAGCATGAAATAGCATCATT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAAGATGCTGCAACTTTaGCAACAAACGTCCAATGAA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIKMLQL*QQTSNE
Trigger: TTCATTGGACGTTTGTTGGCAAAGTTGCAGCATCTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAAGTCTACAATAATCTaGGTTGAATGCATCACACTT +
Preference number: 2 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAKSTII*VECITL
Trigger: AAGTGTGATGCATTCAACCCAGATTATTGTAGACTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACAAACTACAAACATTTaGCTGGCCCATACAGGATTT +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIQTTNI*LAHTGF
Trigger: AAATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR CAA 90 bp AATAAAACTTCATTAGCTATTAATGGCTTGGAAGCAGAGAGGTATTaGCAAAACATTCTCAAACTACAAACATTTGGCTGGCCCATACAG +
Preference number: 2 (lower is better)
Translates to: NKTSLAINGLEAERY*QNILKLQTFGWPIQ
Trigger: CTGTATGGGCCAGCCAAATGTTTGTAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTCCAAGCCATTAATAGCTAATGAAGTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGAAAATTTATCAGACTaGCTTTCTGTGGCTATACAC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIENLSD*LSVAIH
Trigger: GTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGTGCTTTCCCATCAATaGTCAGTTTACTTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIVLSHQ*SVYFLE
Trigger: TTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCAC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAAGTATCAAATCTACTaGCAGTGCATCTTACAGTAC +
Preference number: 2 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIKYQIY*QCILQY
Trigger: GTACTGTAAGATGCACTGCCAGTAGATTTGATACTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR GCA 72 bp AAGCTCCTCCAGGCTAGAGGCAGCCAGCTGGAACCTTaGCCCAGCGCTAGGCCCCAGCCAGTGGTCACTCTG +
Preference number: 3 (lower is better)
Translates to: KLLQARGSQLEP*PSARPQPVVTL
Trigger: CAGAGTGACCACTGGCTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCTGGCTGCCTCTAGCCTGGAGGAGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp GTCTCACATCCAGATGCTGACTGGCCACCTGCCACGTaGCTGGCACACACCCTAGGCACGGGTAGATTCATG +
Preference number: 3 (lower is better)
Translates to: VSHPDADWPPAT*LAHTLGTGRFM
Trigger: CATGAATCTACCCGTGCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCAGTCAGCATCTGGATGTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTaGCACCCCAGTGTGTCCAAGCAGACTGGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SLPVCNQPATHL*HPSVSKQTGWE
Trigger: TTCCCAGCCAGTCTGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp TCAGCAGAATCCATCTCTGCCCGTCTGCAACCAACCTaGAACCCACTTGTGGCACCCCAGTGTGTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: SAESISARLQPT*NPLVAPQCVQA
Trigger: TGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp ACTCTGAAAGCTCAGCAGAATCCATCTCTGCCCGTCTaGAACCAACCTGCAACCCACTTGTGGCACCCCAGT +
Preference number: 3 (lower is better)
Translates to: TLKAQQNPSLPV*NQPATHLWHPS
Trigger: ACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGAGCTTTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGGCAGGAGGATTGCTaGAGGCCAGAGATCGAGGCT +
Preference number: 3 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCRQEDC*RPEIEA
Trigger: AGCCTCGATCTCTGGCCTCAAGCAATCCTCCTGCCT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 72 bp CAGCAATGGTGCCTGAGGTCCTTCTGCTTTGTCTCTTaGCTTCTGCCACCAGCCCGAGAAAACTCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: QQWCLRSFCFVS*LLPPARENSLL
Trigger: AAGCAGAGAGTTTTCTCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAGGACCTCAGGCACCATTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp AGGGCGACCACTACAATTTCCTGCTTGGGGAAAGGATaGCTGCTTCTACTAGTTGAGTGCAGAACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: RATTTISCLGKG*LLLLVECRTGQ
Trigger: CTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGTCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAATAAATACAGTCTCTaGGACACGGGACTCACTTAT +
Preference number: 3 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSNKYSL*DTGLTY
Trigger: ATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTATT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTTCATGAAACCAGAGTaGGCAACTGAGGAACCAGGG +
Preference number: 3 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCFMKPE*ATEEPG
Trigger: CCCTGGTTCCTCAGTTGCCAACTCTGGTTTCATGAA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 72 bp TTTCATGCTGTTGGTTCAGCACATTGGGTAACTAGATaGAGCTCCTCCAGGCTAGAGGCAGCCAGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: FHAVGSAHWVTR*SSSRLEAASWN
Trigger: GTTCCAGCTGGCTGCCTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATGTGCTGAACCAACAGCATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp CTCTCAGCTCCTCAAAGCCATGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAAACAGCAATGGTGCCT +
Preference number: 3 (lower is better)
Translates to: LSAPQSHVHSFS*SPLYLKTAMVP
Trigger: AGGCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAGCTGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp GTTAGCCAAGGCCTCTCTCAGCTCCTCAAAGCCATGTaGATTCCTTCTCATGCAGCCCCCTCTACCTTAAAA +
Preference number: 3 (lower is better)
Translates to: VSQGLSQLLKAM*IPSHAAPSTLK
Trigger: TTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAGCTGAGAGAGGCCTTGGCTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp GATAAAAAGAGAAAGAGGAGGGCAGGCTGGAATAATTaGTCTCACATCCAGATGCTGACTGGCCACCTGCCA +
Preference number: 3 (lower is better)
Translates to: DKKRKRRAGWNN*SHIQMLTGHLP
Trigger: TGGCAGGTGGCCAGTCAGCATCTGGATGTGAGACCAATTATTCCAGCCTGCCCTCCTCTTTCTCTTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAAACTAGACAACCGATaGTGTATGCAAGAGTATGGC +
Preference number: 3 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCKLDNR*CMQEYG
Trigger: GCCATACTCTTGCATACACAATCGGTTGTCTAGTTT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFQFPAP*LLAKAS
Trigger: AGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGCTGGATTCAAAGTGTaGGCCAGGCTGGGTCTTATC +
Preference number: 3 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFAGFKV*ARLGLI
Trigger: GATAAGACCCAGCCTGGCCAACACTTTGAATCCAGC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCCCTGGAGTGCCAGCTaGCTCCTTCCTGTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: FFISNTHERSWHRETVMKPWSAS*LLPVCS
Trigger: GGAACAAACAGGAAGGAGCAAGCTGGCACTCCAGGG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 72 bp TCTGGACACAGTACTGTTCAACAGAGCTTTCTGCAGTaGTGGAAAAGTTCTGCATCCGTGGTGTCAAGTGTG +
Preference number: 3 (lower is better)
Translates to: SGHSTVQQSFLQ*WKSSASVVSSV
Trigger: CACACTTGACACCACGGATGCAGAACTTTTCCATCACTGCAGAAAGCTCTGTTGAACAGTACTGTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp AGCACTCTGGACACAGTACTGTTCAACAGAGCTTTCTaGAGTGATGGAAAAGTTCTGCATCCGTGGTGTCAA +
Preference number: 3 (lower is better)
Translates to: STLDTVLFNRAF*SDGKVLHPWCQ
Trigger: TTGACACCACGGATGCAGAACTTTTCCATCACTGCAGAAAGCTCTGTTGAACAGTACTGTGTCCAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTTCATGAAACCAGAGTaGGCAACTGAGGAACCAGGG +
Preference number: 3 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFFMKPE*ATEEPG
Trigger: CCCTGGTTCCTCAGTTGCCAACTCTGGTTTCATGAA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 72 bp GCCACCCCCAGACAGTCTTCCTTTTGCTACATAACATaGTATAATCATGGATCAAACAGGTTCCACCCATGC +
Preference number: 3 (lower is better)
Translates to: ATPRQSSFCYIT*YNHGSNRFHPC
Trigger: GCATGGGTGGAACCTGTTTGATCCATGATTATATCATGTTATGTAGCAAAAGGAAGACTGTCTGGGGGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 72 bp TGCAACTTTGCCAACAAACGTCCAATGAAGACTAATTaGGATCTCTGGCGAGAACATCCCCAACAAGGTCCA +
Preference number: 3 (lower is better)
Translates to: CNFANKRPMKTN*DLWREHPQQGP
Trigger: TGGACCTTGTTGGGGATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGGACGTTTGTTGGCAAAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR GCA 72 bp AGGAACCAGGGACCCAAGAGTACTCCTAAGCCCACCTaGAGAGATTTTTACTTCTGGTACTCAGTTATCTTT +
Preference number: 3 (lower is better)
Translates to: RNQGPKSTPKPT*RDFYFWYSVIF
Trigger: AAAGATAACTGAGTACCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGTACTCTTGGGTCCCTGGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp AATCATGGATCAAACAGGTTCCACCCATGCTCAAAGTaGGAGGATATTATACAAGGTCATTGGTGGGGGTGT +
Preference number: 3 (lower is better)
Translates to: NHGSNRFHPCSK*EDIIQGHWWGC
Trigger: ACACCCCCACCAATGACCTTGTATAATATCCTCCCACTTTGAGCATGGGTGGAACCTGTTTGATCCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIQFPAP*LLAKAS
Trigger: AGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 72 bp CTCTGGCGAGAACATCCCCAACAAGGTCCAGGTACATaGCTTGCTACTAAAGACTTTATTCATGCATTTACC +
Preference number: 3 (lower is better)
Translates to: LWREHPQQGPGT*LATKDFIHAFT
Trigger: GGTAAATGCATGAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTCGCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 72 bp ACTTTTTCCAAAGCTTTTCAATCACACTGTCTGTTCTaGCTACACAGTATGGTACAGCGCGTGATGTGGAGA +
Preference number: 3 (lower is better)
Translates to: TFSKAFQSHCLF*LHSMVQRVMWR
Trigger: TCTCCACATCACGCGCTGTACCATACTGTGTAGTCAGAACAGACAGTGTGATTGAAAAGCTTTGGAAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp TCTAGCAGTTCCTTTACCAAACGCTACTCAGTAAGATaGTGCAACTTTGCCAACAAACGTCCAATGAAGACT +
Preference number: 3 (lower is better)
Translates to: SSSSFTKRYSVR*CNFANKRPMKT
Trigger: AGTCTTCATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAAGGAACTGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAATAAATACAGTCTCTaGGACACGGGACTCACTTAT +
Preference number: 3 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNKYSL*DTGLTY
Trigger: ATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTATT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGTGCAACCACTGATTaGAGAAGATACACACTTTGT +
Preference number: 3 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSATTD*RRYTLC
Trigger: ACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCACT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAAGGAGTCACAAGATTaGATTAGCCACCCCCAGACA +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIKESQD*ISHPQT
Trigger: TGTCTGGGGGTGGCTAATCAAATCTTGTGACTCCTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTCCAGGTACATGACTaGCTACTAAAGACTTTATTC +
Preference number: 3 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVQVHD*LLKTLF
Trigger: GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAACCATCTCCAATTGTaGAACAAATACACACATACG +
Preference number: 3 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNHLQL*NKYTHT
Trigger: CGTATGTGTGTATTTGTTCAACAATTGGAGATGGTT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGAAGCAGAGAGGTATTaGCAAAACATTCTCAAACTA +
Preference number: 3 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFEAERY*QNILKL
Trigger: TAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAAAAGTACCAAACCCTaGGTTCCAGGACAGTTTGCT +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIKSTKP*VPGQFA
Trigger: AGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR GCA 72 bp GCTGTCTTTAAAGAAGTTGTAACAAATCACACCAGGTaGTGCAATAACTTTCTCCTCCCTAGATTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: AVFKEVVTNHTR*CNNFLLPRFSE
Trigger: CTCTGAAAATCTAGGGAGGAGAAAGTTATTGCAGCACCTGGTGTGATTTGTTACAACTTCTTTAAAGACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR GCA 72 bp GCAACATTAACAGTGGGAATGTTACTTCGCGCAAAGTaGTTTCCCATCAATGCTCAGTTTACTTTCTTGAAT +
Preference number: 3 (lower is better)
Translates to: ATLTVGMLLRAK*FPINAQFTFLN
Trigger: ATTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACTGTTAATGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGAGAAGATACACACTTaGTTCAAGGGTATTCAACCA +
Preference number: 3 (lower is better)
Translates to: FFISNTHERSWHRETVMKEKIHT*FKGIQP
Trigger: TGGTTGAATACCCTTGAACAAAGTGTGTATCTTCTC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATCAAACTACAAACATTaGGCTGGCCCATACAGGATT +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISNYKH*AGPYRI
Trigger: AATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTGA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 72 bp TCCTTTGAAAATGATCTAGTTAGTGCCCAAACCGGGTaGAGGAGTGTTTCAGGTAAGAAGAAGAGTTTATAT +
Preference number: 3 (lower is better)
Translates to: SFENDLVSAQTG*RSVSGKKKSLY
Trigger: ATATAAACTCTTCTTCTTACCTGAAACACTCCTTCACCCGGTTTGGGCACTAACTAGATCATTTTCAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR GCA 72 bp GTCTTTAAAGAAGTTGTAACAAATCACACCAGGTGCTaGAATAACTTTCTCCTCCCTAGATTTTCAGAGCAT +
Preference number: 3 (lower is better)
Translates to: VFKEVVTNHTRC*NNFLLPRFSEH
Trigger: ATGCTCTGAAAATCTAGGGAGGAGAAAGTTATTGCAGCACCTGGTGTGATTTGTTACAACTTCTTTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGTCCAGGTACATGACTaGCTACTAAAGACTTTATTC +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIVQVHD*LLKTLF
Trigger: GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGAC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR TCA 72 bp CACTTTGTTCAAGGGTATTCAACCATCTCCAATTGTTaGACAAATACACACATACGTATCTACAGCCTATGT +
Preference number: 3 (lower is better)
Translates to: HFVQGYSTISNC*TNTHIRIYSLC
Trigger: ACATAGGCTGTAGATACGTATGTGTGTATTTGTTCAACAATTGGAGATGGTTGAATACCCTTGAACAAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp GGAATAGCGTGTTTAAGAGTAATAAATACAGTCTCTTaGACACGGGACTCACTTATCAGTTCATACTACAAT +
Preference number: 3 (lower is better)
Translates to: GIACLRVINTVS*TRDSLISSYYN
Trigger: ATTGTAGTATGAACTGATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTATTACTCTTAAACACGCTATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CCA 72 bp TTAAACTTCTTTATTTCAAATACACATGAACGGTCGTaGCACAGAGAAACAGTGATGAAGGCACAATCAACA +
Preference number: 3 (lower is better)
Translates to: LNFFISNTHERS*HRETVMKAQST
Trigger: TGTTGATTGTGCCTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAAGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAACCATCTCCAATTGTaGAACAAATACACACATACG +
Preference number: 3 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIINHLQL*NKYTHT
Trigger: CGTATGTGTGTATTTGTTCAACAATTGGAGATGGTT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR TCA 72 bp ACAATAATCTGGGTTGAATGCATCACACTTACACATTaGAAATTTATCAGACTGACTTTCTGTGGCTATACA +
Preference number: 3 (lower is better)
Translates to: TIIWVECITLTH*KFIRLTFCGYT
Trigger: TGTATAGCCACAGAAAGTCAGTCTGATAAATTTTCAATGTGTAAGTGTGATGCATTCAACCCAGATTATTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAGCCAGCTGGAACCTTaGCCCAGCGCTAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSQLEP*PSARPQ
Trigger: CTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCTGGCT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCTGGCCACCTGCCACGTaGCTGGCACACACCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSWPPAT*LAHTLG
Trigger: GCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCA...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSAVFTR*CLGLFP
Trigger: AGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 72 bp CCATCTCTGCCCGTCTGCAACCAACCTGCAACCCACTaGTGGCACCCCAGTGTGTCCAAGCAGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLPVCNQPATH*WHPSVSKQTGW
Trigger: CCAGCCAGTCTGCTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGGCTGCAGTGAGCTATaGGAGCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSGCSEL*EHHCTP
Trigger: TGGAGTGCAGTGGTGCTCTCATAGCTCACTGCAGCC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCTTCTGCTTTGTCTCTTaGCTTCTGCCACCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSFCFVS*LLPPAR
Trigger: TCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAA...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSTRDRL*GLHTLM
Trigger: CATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAGCCAGTGGTCACTCTaGAAGCTCAGCAGAATCCAT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSQWSL*KLSRIH
Trigger: ATGGATTCTGCTGAGCTTTCAGAGTGACCACTGGCT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGCTGCTTCTACTAGTTaGGTGCAGAACTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSAASTS*VQNWAE
Trigger: TTCTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 72 bp GTTCCCGTGGCTGTAGGACTGCAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCTCTCAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VPVAVGLQFPAP*LLAKASLSSSK
Trigger: CTTTGAGGAGCTGAGAGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTGCAGTCCTACAGCCACGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCTGCTCCTACACGCTTaGACTGTTGCACAATCGTAT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSLLLHA*TVAQSY
Trigger: ATACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGGCAGGAGGATTGCTTaGGGCCAGAGATCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCGRRIA*GQRSRL
Trigger: CAGCCTCGATCTCTGGCCTCAAGCAATCCTCCTGCC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCACCACTACAATTTCCTaGTTGGGGAAAGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSTTTIS*LGKGWL
Trigger: CAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCTAGAGGCAGCCAGCTaGAACCTTGCCCCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCLEAAS*NLAPAL
Trigger: TAGCGCTGGGGCAAGGTTCCAGCTGGCTGCCTCTAG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGCAGGCTGGAATAATTaGTCTCACATCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSAGWNN*SHIQML
Trigger: CAGCATCTGGATGTGAGACCAATTATTCCAGCCTGC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAACAGTGAGAGGCCCTaGGCACCCACCATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCNSERP*APTIGE
Trigger: CTCTCCTATGGTGGGTGCTCAGGGCCTCTCACTGTT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAGCTTCTCTAAGGGATaGTTCCAGAAACATCCCCTA +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSFSKG*FQKHPL
Trigger: TAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCTCCAAGCAGACTGGCTaGGAACTGATGTTGATACTT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSKQTG*ELMLIL
Trigger: AAGTATCAACATCAGTTCCCAGCCAGTCTGCTTGGA...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCCAATGAAGACTAATTaGGATCTCTGGCGAGAACAT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSPMKTN*DLWREH
Trigger: ATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCATGAGCAGTATGAGCTaGAGGCTCGCCTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCMSSMS*RLASGT
Trigger: GGTTCCTGAGGCGAGCCTGCAGCTCATACTGCTCAT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCCGTGCTCCCGCGGCTaGCGGCGGAGCTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKPCSRG*RRSCCS
Trigger: GCTACAGCAGCTCCGCCGGCAGCCGCGGGAGCACGG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCTTGGGAACAACAGGTaGACCAATGCTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCLGNNR*TNAGRA
Trigger: TGCCCTCCCAGCATTGGTCCACCTGTTGTTCCCAAG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCACCCATGCTCAAAGTaGGAGGATATTATACAAGGT +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSHPCSK*EDIIQG
Trigger: ACCTTGTATAATATCCTCCCACTTTGAGCATGGGTG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAAAGTACCAAACCCTTaGTTCCAGGACAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSKVPNP*FQDSLL
Trigger: TAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTTCCCTTCCCGCCGCTaGCGTCGCCGTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKFPSRR*RRRAPA
Trigger: CGCGGGAGCACGGCGACGCCAGCGGCGGGAAGGGAA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393487.6
3UTR CAA 72 bp ACAGCAATGGTGCCTGAGGTCCTTCTGCTTTGTCTCTaGACTTCTGCCACCAGCCCGAGAAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TAMVPEVLLLCL*TSATSPRKLSA
Trigger: AGCAGAGAGTTTTCTCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAGGACCTCAGGCACCATTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGCCAGCTGGAACCTTaGCCCAGCGCTAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSQLEP*PSARPQ
Trigger: CTGGGGCCTAGCGCTGGGGCAAGGTTCCAGCTGGCT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTGGCCACCTGCCACGTaGCTGGCACACACCCTAGGC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMWPPAT*LAHTLG
Trigger: GCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCAGGTGGACCAATGCTaGGAGGGCAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCQVDQC*EGKLHE
Trigger: TTCATGCAGTTTGCCCTCCCAGCATTGGTCCACCTG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCATAGCTTTCAGGGGGTaGTATGACTTCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCIAFRG*YDFHQA
Trigger: GGCTTGGTGGAAGTCATATCACCCCCTGAAAGCTAT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCAAACAGCAGAATTCTaGATAACTGAAAGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSQTAEF*ITESRK
Trigger: CTTTCGACTTTCAGTTATTCAGAATTCTGCTGTTTG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCACTAAGGTATGGTTATaGCTCACATTTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSTKVWL*LTFLIF
Trigger: GAAGATGAGAAATGTGAGTCATAACCATACCTTAGT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCTGCCTACACTGAAATaGAAAGTATCAAATCTACTG +
Preference number: 4 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSLPTLK*KVSNLL
Trigger: CAGTAGATTTGATACTTTTCATTTCAGTGTAGGCAG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGTGTATGCAAGAGTATaGCAACGACAGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCVYARV*QRQQGE
Trigger: CTCTCCCTGCTGTCGTTGCCATACTCTTGCATACAC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGCCACTAGCTCCACATaGCCACTGAGTACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCATSST*PLSTWN
Trigger: ATTCCAAGTACTCAGTGGCCATGTGGAGCTAGTGGC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp ATATCAGAAAGAAACTGCCAGCAGATAGCATGTAACATGCAGATTGCCAGGGTAGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ISERNCQQIACNMQIARVAVFTR*CLGLFP
Trigger: AGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGC...TACCCTGGCAATCTGCATGTTACATGCTATCTGCTGGCAGTTTCTTTCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGGAAAAGGGAAGGTCTaGAGCGAATTCGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCGKGKV*SEFADL
Trigger: CAAATCTGCGAATTCGCTTCAGACCTTCCCTTTTCC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGGCAGGAGGATTGCTTaGGGCCAGAGATCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMGRRIA*GQRSRL
Trigger: CAGCCTCGATCTCTGGCCTCAAGCAATCCTCCTGCC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGCTCACTGCCAGCTCTaGCTCCTGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMAHCQL*LLGSRH
Trigger: ATGGCGTGAACCCAGGAGGCAGAGCTGGCAGTGAGC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCVHSFS*SPLYLK
Trigger: TTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCAC...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTAGAGGCAGCCAGCTaGAACCTTGCCCCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLEAAS*NLAPAL
Trigger: TAGCGCTGGGGCAAGGTTCCAGCTGGCTGCCTCTAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAAGAGGAGGGCAGGCTaGAATAATTGGTCTCACATC +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCKRRAG*NNWSHI
Trigger: GATGTGAGACCAATTATTCCAGCCTGCCCTCCTCTT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAAVFTR*CLGLFP
Trigger: AGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCATGGTCTTTCTTCATaGAACCAGAGTTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCHGLSS*NQSWQL
Trigger: CAGTTGCCAACTCTGGTTTCATGAAGAAAGACCATG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCCATCTCTGCCCGTCTaGAACCAACCTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMPSLPV*NQPATH
Trigger: GTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGCTTCTCTAAGGGATaGTTCCAGAAACATCCCCTA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSFSKG*FQKHPL
Trigger: TAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCACCAGAGTTGGCAACTaGGGAACCAGGGACCCAAGA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFTRVGN*GTRDPR
Trigger: TCTTGGGTCCCTGGTTCCTCAGTTGCCAACTCTGGT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGATCGAGGCTGCAGTaGGCTATGAGAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFRSRLQ*AMRAPL
Trigger: CAGTGGTGCTCTCATAGCTCACTGCAGCCTCGATCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCTCACTGCCAGCTCTaGCTCCTGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKAHCQL*LLGSRH
Trigger: ATGGCGTGAACCCAGGAGGCAGAGCTGGCAGTGAGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACGTCTGCAACCAACCTaGAACCCACTTGTGGCACCC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAARLQPT*NPLVAP
Trigger: GGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACCATCTCTGCCCGTCTaGAACCAACCTGCAACCCAC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAPSLPV*NQPATH
Trigger: GTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCACAACCGATTGTGTATaGAAGAGTATGGCAACGACA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCTTDCV*KSMATT
Trigger: TGTCGTTGCCATACTCTTGCATACACAATCGGTTGT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGATGCACCCTGGAGTaGCAGCTTGCTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFRCTLE*QLAPSC
Trigger: ACAGGAAGGAGCAAGCTGGCACTCCAGGGTGCATCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCCAAATCTACTGGCAGTaGATCTTACAGTACTGTCGA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCQIYWQ*ILQYCR
Trigger: TCGACAGTACTGTAAGATGCACTGCCAGTAGATTTG...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAATGAAATTTGCTCATaGGCACTGGGCCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCNEICS*ALGQGN
Trigger: ATTTCCTTGGCCCAGTGCCCATGAGCAAATTTCATT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCTTGGGAACAACAGGTaGACCAATGCTGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFLGNNR*TNAGRA
Trigger: TGCCCTCCCAGCATTGGTCCACCTGTTGTTCCCAAG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTGGTGTCAAGTGTGGTaGCCACTAGCTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMWCQVW*PLAPHG
Trigger: GCCATGTGGAGCTAGTGGCCACCACACTTGACACCA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAGCTCAGATGCACCCTaGAGTGCCAGCTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMSSDAP*SASLLL
Trigger: AAGGAGCAAGCTGGCACTCCAGGGTGCATCTGAGCT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGTGCCCAAACCGGGTaGAGGAGTGTTTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSAQTG*RSVSGK
Trigger: CTTACCTGAAACACTCCTTCACCCGGTTTGGGCACT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAGTGCCCAAACCGGGTaGAGGAGTGTTTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMSAQTG*RSVSGK
Trigger: CTTACCTGAAACACTCCTTCACCCGGTTTGGGCACT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTRDRL*GLHTLM
Trigger: CATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGCAGAATCCATCTCTaGCCGTCTGCAACCAACCTG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFSRIHL*PSATNL
Trigger: CAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAGATGCACCCTGGAGTaGCAGCTTGCTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAARCTLE*QLAPSC
Trigger: ACAGGAAGGAGCAAGCTGGCACTCCAGGGTGCATCT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACATCCAGATGCTGACTaGCCACCTGCCACGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIHPDAD*PPATCL
Trigger: CAGGCACGTGGCAGGTGGCCAGTCAGCATCTGGATG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATGGTGTCAAGTGTGGTaGCCACTAGCTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAWCQVW*PLAPHG
Trigger: GCCATGTGGAGCTAGTGGCCACCACACTTGACACCA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAAGTGTTGGCCAGGCTaGGTCTTATCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFKCWPG*VLSGDW
Trigger: CCAGTCTCCAGATAAGACCCAGCCTGGCCAACACTT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTTTCAGGGGGTGATATaGCTTCCACCAAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMFQGVI*LPPSQN
Trigger: GTTCTGGCTTGGTGGAAGTCATATCACCCCCTGAAA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTTTCAGGGGGTGATATaGCTTCCACCAAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFFQGVI*LPPSQN
Trigger: GTTCTGGCTTGGTGGAAGTCATATCACCCCCTGAAA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTATAGCTTTCAGGGGGTaGTATGACTTCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFIAFRG*YDFHQA
Trigger: GGCTTGGTGGAAGTCATATCACCCCCTGAAAGCTAT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCATTGGGTAACTAGATaGAGCTCCTCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFHWVTR*SSSRLE
Trigger: CTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGATCGAGGCTGCAGTaGGCTATGAGAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKRSRLQ*AMRAPL
Trigger: CAGTGGTGCTCTCATAGCTCACTGCAGCCTCGATCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAACAGTGAGAGGCCCTaGGCACCCACCATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLNSERP*APTIGE
Trigger: CTCTCCTATGGTGGGTGCTCAGGGCCTCTCACTGTT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCACTAGTCCCAACCTTTaGCACTTTTTCCATTTACTA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCTSPNL*HFFHLL
Trigger: TAGTAAATGGAAAAAGTGTCAAAGGTTGGGACTAGT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTATGGTACAGCGCGTaGTGTGGAGAATGCATGAGA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVWYSA*CGECMR
Trigger: TCTCATGCATTCTCCACATCACGCGCTGTACCATAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAATGAGCTTATGGGCTaGATTCAGTTCCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNELMG*IQFPWL
Trigger: CAGCCACGGGAACTGAATTCAGCCCATAAGCTCATT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAATGAGCTTATGGGCTaGATTCAGTTCCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFNELMG*IQFPWL
Trigger: CAGCCACGGGAACTGAATTCAGCCCATAAGCTCATT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AAACAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATG +
Preference number: 4 (lower is better)
Translates to: KQAPLELEILCPLSKNTVTRDRL*GLHTLM
Trigger: CATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGT...AACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCATCCACCATTCCTTCTaGAACACCATTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCIHHSF*NTILKF
Trigger: AAATTTGAGAATGGTGTTGCAGAAGGAATGGTGGAT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACAACAGGTGGACCAATaGTGGGAGGGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAQQVDQ*WEGKLH
Trigger: ATGCAGTTTGCCCTCCCAGCATTGGTCCACCTGTTG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTCCTCAAAGCCATGTaGATTCCTTCTCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLLKAM*IPSHAA
Trigger: GGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGATGCACCCTGGAGTaGCAGCTTGCTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKRCTLE*QLAPSC
Trigger: ACAGGAAGGAGCAAGCTGGCACTCCAGGGTGCATCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAATTCTCAGCTCAGATaGACCCTGGAGTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNSQLR*TLECQL
Trigger: AAGCTGGCACTCCAGGGTGCATCTGAGCTGAGAATT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCTGCAACCCACTTGTaGCACCCCAGTGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPATHL*HPSVSK
Trigger: CTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACCTGCAACCCACTTGTaGCACCCCAGTGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLPATHL*HPSVSK
Trigger: CTTGGACACACTGGGGTGCCACAAGTGGGTTGCAGG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACAGGTGGACCAATGCTaGGAGGGCAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAQVDQC*EGKLHE
Trigger: TTCATGCAGTTTGCCCTCCCAGCATTGGTCCACCTG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGAGAGAAAGGGGGCTaGACATGGTGGCACACACCT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKREKGG*TWWHTP
Trigger: AGGTGTGTGCCACCATGTCCAGCCCCCTTTCTCTCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTGTATGCAAGAGTATaGCAACGACAGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVYARV*QRQQGE
Trigger: CTCTCCCTGCTGTCGTTGCCATACTCTTGCATACAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAGGCTGGGTCTTATCTaGAGACTGGAGATGAATGCC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMRLGLI*RLEMNA
Trigger: GGCATTCATCTCCAGTCTCCAGATAAGACCCAGCCT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAAGTGTTGGCCAGGCTaGGTCTTATCTGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAKCWPG*VLSGDW
Trigger: CCAGTCTCCAGATAAGACCCAGCCTGGCCAACACTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGCTCAGATGCACCCTaGAGTGCCAGCTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKSSDAP*SASLLL
Trigger: AAGGAGCAAGCTGGCACTCCAGGGTGCATCTGAGCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAACCCTGAAAGTCAACTaGATGCAGTACTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAATLKVN*MQYSWL
Trigger: GAGCCAGGAGTACTGCATTCAGTTGACTTTCAGGGT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCTGTGGGAATGCCCATaGCTATTGAAACTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFLWECP*LLKLLF
Trigger: GAACAGGAGTTTCAATAGTCATGGGCATTCCCACAG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAATAGCTTTCAGGGGGTaGTATGACTTCCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAIAFRG*YDFHQA
Trigger: GGCTTGGTGGAAGTCATATCACCCCCTGAAAGCTAT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAGCCAGTGGTCACTCTaGAAGCTCAGCAGAATCCAT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAASQWSL*KLSRIH
Trigger: ATGGATTCTGCTGAGCTTTCAGAGTGACCACTGGCT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACATTGGGTAACTAGATaGAGCTCCTCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAHWVTR*SSSRLE
Trigger: CTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGTATGGTACAGCGCGTaGTGTGGAGAATGCATGAGA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAVWYSA*CGECMR
Trigger: TCTCATGCATTCTCCACATCACGCGCTGTACCATAC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTTCTGCTTTGTCTCTTaGCTTCTGCCACCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKFCFVS*LLPPAR
Trigger: TCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAATGAGCTTATGGGCTaGATTCAGTTCCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANELMG*IQFPWL
Trigger: CAGCCACGGGAACTGAATTCAGCCCATAAGCTCATT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp ACAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTTCGATTGCCAGGGTATTTaGCCTAAGCATTTAGGCACC +
Preference number: 4 (lower is better)
Translates to: TSPTGIRNSVSSVQEYCFDCQGI*PKHLGT
Trigger: GGTGCCTAAATGCTTAGGTCAAATACCCTGGCAATC...GAAACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR GCA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCACACGCTTGAACTGTTaGACAATCGTATTTAATTCA +
Preference number: 4 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCTRLNC*TIVFNS
Trigger: TGAATTAAATACGATTGTGCAACAGTTCAAGCGTGT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCTCCTGTTCTTCCGTTaGCAATCTGTACAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMLLFFR*QSVQQV
Trigger: AACCTGCTGTACAGATTGGCAACGGAAGAACAGGAG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTCCTGTTCTTCCGTTaGCAATCTGTACAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLLFFR*QSVQQV
Trigger: AACCTGCTGTACAGATTGGCAACGGAAGAACAGGAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAATGAGCAGTATGAGCTaGAGGCTCGCCTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIMSSMS*RLASGT
Trigger: GGTTCCTGAGGCGAGCCTGCAGCTCATACTGCTCAT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGTGCATTCCTTCTCATaGAGCCCCCTCTACCTTAAA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMVHSFS*SPLYLK
Trigger: TTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCAC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAATTCTCAGCTCAGATaGACCCTGGAGTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANSQLR*TLECQL
Trigger: AAGCTGGCACTCCAGGGTGCATCTGAGCTGAGAATT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGCAGGCTGGAATAATTaGTCTCACATCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFAGWNN*SHIQML
Trigger: CAGCATCTGGATGTGAGACCAATTATTCCAGCCTGC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGAGAGAAAGGGGGCTaGACATGGTGGCACACACCT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIREKGG*TWWHTP
Trigger: AGGTGTGTGCCACCATGTCCAGCCCCCTTTCTCTCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCAGGAACCTGAAATCTaGTCAGAGAGACAGCACACA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFQEPEI*SERQHT
Trigger: TGTGTGCTGTCTCTCTGACCAGATTTCAGGTTCCTG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGAGGGACAGCACTGTTaGGAGACAACCTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFEGQHC*ETTSFS
Trigger: TGAAAAAGAGGTTGTCTCCCAACAGTGCTGTCCCTC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAAATCTGGTACAACCTaGCAAGGAGATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFKSGTT*QGDSSG
Trigger: GCCTGAGGAATCTCCTTGCCAGGTTGTACCAGATTT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTTTCAGGGGGTGATATaGCTTCCACCAAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKFQGVI*LPPSQN
Trigger: GTTCTGGCTTGGTGGAAGTCATATCACCCCCTGAAA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACTATTTTGGTAAAATaGTTCGGCGCCCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTILVK*FGALSR
Trigger: CCTTGAGAGGGCGCCGAATCATTTTACCAAAATAGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACAGAGCTTTCTGCAGTaGTGGAAAAGTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAQSFLQ*WKSSAS
Trigger: GGATGCAGAACTTTTCCATCACTGCAGAAAGCTCTG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAACCAGTCTTTTCTTTaGGGGACAGCACTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANQSFL*GTALLG
Trigger: TCCCAACAGTGCTGTCCCTCAAAGAAAAGACTGGTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCAAGCAGGCTTAAGTaGGTTCTCGGCTTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPSRLK*VLGLGS
Trigger: AGACCCTAAGCCGAGAACTCACTTAAGCCTGCTTGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGTGCCCAAACCGGGTaGAGGAGTGTTTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISAQTG*RSVSGK
Trigger: CTTACCTGAAACACTCCTTCACCCGGTTTGGGCACT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTTCTACTAGTTGAGTaGAGAACTGGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLLLVE*RTGQKG
Trigger: TCCTTTCTGCCCAGTTCTGCACTCAACTAGTAGAAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAATTCTCAGCTCAGATaGACCCTGGAGTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKNSQLR*TLECQL
Trigger: AAGCTGGCACTCCAGGGTGCATCTGAGCTGAGAATT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGCTTCTCTAAGGGATaGTTCCAGAAACATCCCCTA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSFSKG*FQKHPL
Trigger: TAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTGCAGACCAACATGTTaGAAAAGGGAAGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFCRPTC*KREGLK
Trigger: CTTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTCTCCAGGATGTTCTTaGTTGCCGCTATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMSPGCS*LPLWNK
Trigger: TTTGTTCCATAGCGGCAACCAAGAACATCCTGGAGA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATGCTTGGGGAAAGGATaGCTGCTTCTACTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAACLGKG*LLLLVE
Trigger: CTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTGGCCACTGAGTACTTaGAATGTCACTAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFWPLST*NVTSVC
Trigger: ACACACACTAGTGACATTCCAAGTACTCAGTGGCCA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTGGCCACTGAGTACTTaGAATGTCACTAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFWPLST*NVTSVC
Trigger: ACACACACTAGTGACATTCCAAGTACTCAGTGGCCA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCCACTAGCTCCACATaGCCACTGAGTACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKATSST*PLSTWN
Trigger: ATTCCAAGTACTCAGTGGCCATGTGGAGCTAGTGGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGTACAGCGCGTGATGTaGAGAATGCATGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAVQRVM*RMHETK
Trigger: CTTAGTCTCATGCATTCTCCACATCACGCGCTGTAC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGAGGGACAGCACTGTTaGGAGACAACCTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAEGQHC*ETTSFS
Trigger: TGAAAAAGAGGTTGTCTCCCAACAGTGCTGTCCCTC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAAATCTGGTACAACCTaGCAAGGAGATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAKSGTT*QGDSSG
Trigger: GCCTGAGGAATCTCCTTGCCAGGTTGTACCAGATTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAACCCTGAAAGTCAACTaGATGCAGTACTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLTLKVN*MQYSWL
Trigger: GAGCCAGGAGTACTGCATTCAGTTGACTTTCAGGGT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGAAACATTTTACCAATaGAGCCCAGCTGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFETFYQ*SPAGKT
Trigger: AGTTTTCCCAGCTGGGCTTCATTGGTAAAATGTTTC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGTAAGATCCGGCGCTTaGAACATTTTACCAATGAAG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFVRSGA*NILPMK
Trigger: CTTCATTGGTAAAATGTTTCAAGCGCCGGATCTTAC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTAAGATCCGGCGCTTaGAACATTTTACCAATGAAG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVRSGA*NILPMK
Trigger: CTTCATTGGTAAAATGTTTCAAGCGCCGGATCTTAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGGAAAAGGGAAGGTCTaGAGCGAATTCGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKGKGKV*SEFADL
Trigger: CAAATCTGCGAATTCGCTTCAGACCTTCCCTTTTCC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGACACAGCACAGGAAATaGTGCTATTTCATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMTQHRK*CYFMLL
Trigger: CAACAGCATGAAATAGCATCATTTCCTGTGCTGTGT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCACACAGCACAGGAAATaGTGCTATTTCATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFTQHRK*CYFMLL
Trigger: CAACAGCATGAAATAGCATCATTTCCTGTGCTGTGT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGCTGCTTCTACTAGTTaGGTGCAGAACTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLAASTS*VQNWAE
Trigger: TTCTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAACCAGTCTTTTCTTTaGGGGACAGCACTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKNQSFL*GTALLG
Trigger: TCCCAACAGTGCTGTCCCTCAAAGAAAAGACTGGTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCCAATGAAGACTAATTaGGATCTCTGGCGAGAACAT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMPMKTN*DLWREH
Trigger: ATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGGCCCATACAGGATTTaGTCTGTGCTAGATGATAAA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFGPYRI*SVLDDK
Trigger: TTTATCATCTAGCACAGATCAAATCCTGTATGGGCC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGGCCCATACAGGATTTaGTCTGTGCTAGATGATAAA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFGPYRI*SVLDDK
Trigger: TTTATCATCTAGCACAGATCAAATCCTGTATGGGCC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCCTGATAGTGATGAGTaGAGACCAACATGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMPDSDE*RPTCWK
Trigger: TTTCCAACATGTTGGTCTGCACTCATCACTATCAGG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCAGGATGTTCTTGGTTaGCGCTATGGAACAAATAAC +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFQDVLG*RYGTNN
Trigger: GTTATTTGTTCCATAGCGGCAACCAAGAACATCCTG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCAGGATGTTCTTGGTTaGCGCTATGGAACAAATAAC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFQDVLG*RYGTNN
Trigger: GTTATTTGTTCCATAGCGGCAACCAAGAACATCCTG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAATCACACCAGGTGCTaGAATAACTTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANHTRC*NNFLLP
Trigger: AGGGAGGAGAAAGTTATTGCAGCACCTGGTGTGATT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACAAATCACACCAGGTaGTGCAATAACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTNHTR*CNNFLL
Trigger: GAGGAGAAAGTTATTGCAGCACCTGGTGTGATTTGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGACCACTACAATTTCCTaGTTGGGGAAAGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKTTTIS*LGKGWL
Trigger: CAGCCATCCTTTCCCCAAGCAGGAAATTGTAGTGGT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTCCTCAAAGCCATGTaGATTCCTTCTCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLLKAM*IPSHAA
Trigger: GGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTCCTCAAAGCCATGTaGATTCCTTCTCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILLKAM*IPSHAA
Trigger: GGCTGCATGAGAAGGAATGCACATGGCTTTGAGGAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCGCTACTCAGTAAGATaGTGCAACTTTGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFRYSVR*CNFANK
Trigger: TTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCGCTACTCAGTAAGATaGTGCAACTTTGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFRYSVR*CNFANK
Trigger: TTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATTACTTCGCGCAAAGTaGTTTCCCATCAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALLRAK*FPINAQ
Trigger: CTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCCAGGAGCCAATCAATaGGTTTCTCCTTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFPGANQ*VSPCKT
Trigger: TGTTTTACAAGGAGAAACCCATTGATTGGCTCCTGG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATGCAGACCAACATGTTaGAAAAGGGAAGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAACRPTC*KREGLK
Trigger: CTTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAGATACCTCCGCAGGTaGGTTTACATGGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMRYLRR*VYMDFK
Trigger: CTTAAAATCCATGTAAACCCACCTGCGGAGGTATCT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGATACCTCCGCAGGTaGGTTTACATGGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFRYLRR*VYMDFK
Trigger: CTTAAAATCCATGTAAACCCACCTGCGGAGGTATCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAATGAAATTTGCTCATaGGCACTGGGCCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNEICS*ALGQGN
Trigger: ATTTCCTTGGCCCAGTGCCCATGAGCAAATTTCATT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTGCTTGGGGAAAGGATaGCTGCTTCTACTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKCLGKG*LLLLVE
Trigger: CTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGTACAGCGCGTGATGTaGAGAATGCATGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKVQRVM*RMHETK
Trigger: CTTAGTCTCATGCATTCTCCACATCACGCGCTGTAC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCACCCATGCTCAAAGTaGGAGGATATTATACAAGGT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMHPCSK*EDIIQG
Trigger: ACCTTGTATAATATCCTCCCACTTTGAGCATGGGTG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAGGCTGGGTCTTATCTaGAGACTGGAGATGAATGCC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLRLGLI*RLEMNA
Trigger: GGCATTCATCTCCAGTCTCCAGATAAGACCCAGCCT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAAAGTACCAAACCCTTaGTTCCAGGACAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFKVPNP*FQDSLL
Trigger: TAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAAAGTACCAAACCCTTaGTTCCAGGACAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFKVPNP*FQDSLL
Trigger: TAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTGCTCCTACACGCTTaGACTGTTGCACAATCGTAT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLLLHA*TVAQSY
Trigger: ATACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTGTGGGAATGCCCATaGCTATTGAAACTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILWECP*LLKLLF
Trigger: GAACAGGAGTTTCAATAGTCATGGGCATTCCCACAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGGAAAAGGGAAGGTCTaGAGCGAATTCGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIGKGKV*SEFADL
Trigger: CAAATCTGCGAATTCGCTTCAGACCTTCCCTTTTCC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTCACACTGTCTGTTCTaGCTACACAGTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKSHCLF*LHSMVQ
Trigger: CTGTACCATACTGTGTAGTCAGAACAGACAGTGTGA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTGCAACCACTGATTTaGGAAGATACACACTTTGTT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVQPLI*EDTHFV
Trigger: AACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGACAGGGAATCAAGTATaGAGATTTCCTCTTTACCTC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMTGNQV*RFPLYL
Trigger: GAGGTAAAGAGGAAATCTTCATACTTGATTCCCTGT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATATTTCAAATACACATaGACGGTCGTGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAYFKYT*TVVAQR
Trigger: TCTCTGTGCCACGACCGTTCATGTGTATTTGAAATA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATGGCTACAGTTCCATTaGGGAGCCTCATCTCATTTC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIWLQFH*GASSHF
Trigger: GAAATGAGATGAGGCTCCGCAATGGAACTGTAGCCA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGCGAATTCGCAGATTTaGTTTCTGTCTATCACAATG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMANSQI*FLSITM
Trigger: CATTGTGATAGACAGAAAGCAAATCTGCGAATTCGC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAACAACCGATTGTGTATaGAAGAGTATGGCAACGACA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAATTDCV*KSMATT
Trigger: TGTCGTTGCCATACTCTTGCATACACAATCGGTTGT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATTAAAACAGCAATGGTaGCTGAGGTCCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALKQQW*LRSFCF
Trigger: AAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACAAATCTACTGGCAGTaGATCTTACAGTACTGTCGA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAQIYWQ*ILQYCR
Trigger: TCGACAGTACTGTAAGATGCACTGCCAGTAGATTTG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACCAGGAGCCAATCAATaGGTTTCTCCTTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAPGANQ*VSPCKT
Trigger: TGTTTTACAAGGAGAAACCCATTGATTGGCTCCTGG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATGTGTCCAAGCAGACTaGCTGGGAACTGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIICVQAD*LGTDVD
Trigger: ATCAACATCAGTTCCCAGCCAGTCTGCTTGGACACA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGCTATTTCATGCTGTTaGTTCAGCACATTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAAISCC*FSTLGN
Trigger: GTTACCCAATGTGCTGAACCAACAGCATGAAATAGC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACAGGAACCTGAAATCTaGTCAGAGAGACAGCACACA +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIQEPEI*SERQHT
Trigger: TGTGTGCTGTCTCTCTGACCAGATTTCAGGTTCCTG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACTACAAACATTTGGCTaGCCCATACAGGATTTGATC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALQTFG*PIQDLI
Trigger: GATCAAATCCTGTATGGGCCAGCCAAATGTTTGTAG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCAAACTACAAACATTTaGCTGGCCCATACAGGATTT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMQTTNI*LAHTGF
Trigger: AAATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCAAACTACAAACATTTaGCTGGCCCATACAGGATTT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFQTTNI*LAHTGF
Trigger: AAATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCCAAAGTGTTCTGAATaGGACACTTCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMPKCSE*DTSVFP
Trigger: TGGAAAAACTGAAGTGTCCCATTCAGAACACTTTGG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCCAAAGTGTTCTGAATaGGACACTTCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFPKCSE*DTSVFP
Trigger: TGGAAAAACTGAAGTGTCCCATTCAGAACACTTTGG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCCAAAGTGTTCTGAATaGGACACTTCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFPKCSE*DTSVFP
Trigger: TGGAAAAACTGAAGTGTCCCATTCAGAACACTTTGG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACACATGAACGGTCGTaGCACAGAGAAACAGTGATG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITHERS*HRETVM
Trigger: CATCACTGTTTCTCTGTGCCACGACCGTTCATGTGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAACACATGAACGGTCGTaGCACAGAGAAACAGTGATG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLTHERS*HRETVM
Trigger: CATCACTGTTTCTCTGTGCCACGACCGTTCATGTGT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCAAACAGCAGAATTCTaGATAACTGAAAGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMQTAEF*ITESRK
Trigger: CTTTCGACTTTCAGTTATTCAGAATTCTGCTGTTTG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGAAAATTTATCAGACTaGCTTTCTGTGGCTATACAC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFENLSD*LSVAIH
Trigger: GTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTACAATAATCTGGGTTaGATGCATCACACTTACACA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMYNNLG*MHHTYT
Trigger: TGTGTAAGTGTGATGCATTCAACCCAGATTATTGTA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGATTCCTGTTTTTGAATaGAATTTGCTCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMIPVFE*NLLMGT
Trigger: AGTGCCCATGAGCAAATTTCATTCAAAAACAGGAAT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACATGGTCTTTCTTCATaGAACCAGAGTTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLHGLSS*NQSWQL
Trigger: CAGTTGCCAACTCTGGTTTCATGAAGAAAGACCATG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTCTTGGGAACAAGAATaGGTTTCTTGGGAACAACAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKSWEQE*VSWEQQ
Trigger: CTGTTGTTCCCAAGAAACTCATTCTTGTTCCCAAGA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACTAGTCCCAACCTTTaGCACTTTTTCCATTTACTA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTSPNL*HFFHLL
Trigger: TAGTAAATGGAAAAAGTGTCAAAGGTTGGGACTAGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATCACACTGTCTGTTCTaGCTACACAGTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISHCLF*LHSMVQ
Trigger: CTGTACCATACTGTGTAGTCAGAACAGACAGTGTGA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGGCCCATACAGGATTTaGTCTGTGCTAGATGATAAA +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKGPYRI*SVLDDK
Trigger: TTTATCATCTAGCACAGATCAAATCCTGTATGGGCC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACTAAGGTATGGTTATaGCTCACATTTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTKVWL*LTFLIF
Trigger: GAAGATGAGAAATGTGAGTCATAACCATACCTTAGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTGCCTACACTGAAATaGAAAGTATCAAATCTACTG +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLPTLK*KVSNLL
Trigger: CAGTAGATTTGATACTTTTCATTTCAGTGTAGGCAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTATTTCAAATACACATaGACGGTCGTGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKYFKYT*TVVAQR
Trigger: TCTCTGTGCCACGACCGTTCATGTGTATTTGAAATA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCAGGATGTTCTTGGTTaGCGCTATGGAACAAATAAC +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKQDVLG*RYGTNN
Trigger: GTTATTTGTTCCATAGCGGCAACCAAGAACATCCTG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAATGATGCTATTTCATaGTGTTGGTTCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMNDAIS*CWFSTL
Trigger: CAATGTGCTGAACCAACAGCATGAAATAGCATCATT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAACTCCTAAGCCCACCTaGAGAGATTTTTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLTPKPT*RDFYFW
Trigger: CCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGTGCTTTCCCATCAATaGTCAGTTTACTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMVLSHQ*SVYFLE
Trigger: TTCAAGAAAGTAAACTGAGCATTGATGGGAAAGCAC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATTACTTCGCGCAAAGTaGTTTCCCATCAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILLRAK*FPINAQ
Trigger: CTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp ACAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTTCTTACCTTTCCCATTTTaGCATGTAGTATACCAAGAC +
Preference number: 4 (lower is better)
Translates to: TSPTGIRNSVSSVQEYCFLPFPF*HVVYQD
Trigger: GTCTTGGTATACTACATGGCAAAATGGGAAAGGTAA...GAAACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR GCA 90 bp CAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTTCAATATCAGAAAGAAACTaGCAGCAGATAGCATGTAAC +
Preference number: 4 (lower is better)
Translates to: QAPLELEILCPLSKNTVSISERN*QQIACN
Trigger: GTTACATGCTATCTGCTGGCAGTTTCTTTCTGATAT...TGAAACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR CCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGCAGGTGGGTTTACATaGATTTTAAGAAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFAGGFT*ILRSNG
Trigger: ACCATTACTTCTTAAAATCCATGTAAACCCACCTGC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGATACCTCCGCAGGTaGGTTTACATGGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKRYLRR*VYMDFK
Trigger: CTTAAAATCCATGTAAACCCACCTGCGGAGGTATCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATCTCCAGGATGTTCTTaGTTGCCGCTATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISPGCS*LPLWNK
Trigger: TTTGTTCCATAGCGGCAACCAAGAACATCCTGGAGA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTATCTCCAGGATGTTCTTaGTTGCCGCTATGGAACAAA +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLSPGCS*LPLWNK
Trigger: TTTGTTCCATAGCGGCAACCAAGAACATCCTGGAGA...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACAAACTACAAACATTTaGCTGGCCCATACAGGATTT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAQTTNI*LAHTGF
Trigger: AAATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAAGTATCAAATCTACTaGCAGTGCATCTTACAGTAC +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMKYQIY*QCILQY
Trigger: GTACTGTAAGATGCACTGCCAGTAGATTTGATACTT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR CAA 72 bp CAGGCAAAAGTACCAAACCCTTGGTTCCAGGACAGTTaGCTAATTACTAATACAATGAAACAACTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QAKVPNPWFQDS*LITNTMKQLGA
Trigger: TGCTCCTAGTTGTTTCATTGTATTAGTAATTAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGAAACATTTTACCAATaGAGCCCAGCTGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLETFYQ*SPAGKT
Trigger: AGTTTTCCCAGCTGGGCTTCATTGGTAAAATGTTTC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGTAAGATCCGGCGCTTaGAACATTTTACCAATGAAG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLVRSGA*NILPMK
Trigger: CTTCATTGGTAAAATGTTTCAAGCGCCGGATCTTAC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGAAAATTTATCAGACTaGCTTTCTGTGGCTATACAC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAENLSD*LSVAIH
Trigger: GTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAACACCTTCTAATTATTaGCTAGTGCAACCACTGATT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAATPSNY*LVQPLI
Trigger: AATCAGTGGTTGCACTAGTCAATAATTAGAAGGTGT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCAATGAAGACTAATTaGGATCTCTGGCGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPMKTN*DLWREH
Trigger: ATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCTTTCCAAAGTGTTCTaGATGGGACACTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKLSKVF*MGHFSF
Trigger: AAAACTGAAGTGTCCCATTCAGAACACTTTGGAAAG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTATATTTCAAATACACATaGACGGTCGTGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLYFKYT*TVVAQR
Trigger: TCTCTGTGCCACGACCGTTCATGTGTATTTGAAATA...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTACACGCTTGAACTGTTaGACAATCGTATTTAATTCA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFTRLNC*TIVFNS
Trigger: TGAATTAAATACGATTGTGCAACAGTTCAAGCGTGT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGCTGAATGTAATATATaGCCTTTTCTTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFAECNI*PFLEHT
Trigger: TGTATGCTCAAGAAAAGGGCATATATTACATTCAGC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTCTATCACAATGTTTTaGATCTTTTTCAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMSITMF*IFFRVA
Trigger: TGCAACCCTGAAAAAGATGCAAAACATTGTGATAGA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCTGATAGTGATGAGTaGAGACCAACATGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPDSDE*RPTCWK
Trigger: TTTCCAACATGTTGGTCTGCACTCATCACTATCAGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACAAATCACACCAGGTaGTGCAATAACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITNHTR*CNNFLL
Trigger: GAGGAGAAAGTTATTGCAGCACCTGGTGTGATTTGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTATTAAAACAGCAATGGTaGCTGAGGTCCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLKQQW*LRSFCF
Trigger: AAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAA...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATTAAAACAGCAATGGTaGCTGAGGTCCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILKQQW*LRSFCF
Trigger: AAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACAAATCTACTGGCAGTaGATCTTACAGTACTGTCGA +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLQIYWQ*ILQYCR
Trigger: TCGACAGTACTGTAAGATGCACTGCCAGTAGATTTG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp TTTATATCAGAAAGAAACTGCCAGCAGATAGCATGTAACATGCAGATTGCCAGGCTTTTCCCTTCATTGTaGCTGCTTCTATTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: FISERNCQQIACNMQIARLFPSL*LLLFSN
Trigger: ATTGGAAAATAGAAGCAGGCACAATGAAGGGAAAAG...CCTGGCAATCTGCATGTTACATGCTATCTGCTGGCAGTTTCTTTCTGATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCAGGAGCCAATCAATaGGTTTCTCCTTGTAAAACA +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPGANQ*VSPCKT
Trigger: TGTTTTACAAGGAGAAACCCATTGATTGGCTCCTGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGCAGGTGGGTTTACATaGATTTTAAGAAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAAGGFT*ILRSNG
Trigger: ACCATTACTTCTTAAAATCCATGTAAACCCACCTGC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAAGTCTACAATAATCTaGGTTGAATGCATCACACTT +
Preference number: 4 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMKSTII*VECITL
Trigger: AAGTGTGATGCATTCAACCCAGATTATTGTAGACTT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGATAAATACAGTCTCTTaGACACGGGACTCACTTATC +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKINTVS*TRDSLI
Trigger: GATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTAT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGCTATTTCATGCTGTTaGTTCAGCACATTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLAISCC*FSTLGN
Trigger: GTTACCCAATGTGCTGAACCAACAGCATGAAATAGC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTACAAACATTTGGCTaGCCCATACAGGATTTGATC +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILQTFG*PIQDLI
Trigger: GATCAAATCCTGTATGGGCCAGCCAAATGTTTGTAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTACAAACATTTGGCTaGCCCATACAGGATTTGATC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLQTFG*PIQDLI
Trigger: GATCAAATCCTGTATGGGCCAGCCAAATGTTTGTAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAAGTATCAAATCTACTaGCAGTGCATCTTACAGTAC +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAKYQIY*QCILQY
Trigger: GTACTGTAAGATGCACTGCCAGTAGATTTGATACTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCAAACAGCAGAATTCTaGATAACTGAAAGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKQTAEF*ITESRK
Trigger: CTTTCGACTTTCAGTTATTCAGAATTCTGCTGTTTG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTTTCCAAGTGGAAATaGCAATCGTCTTATCTACAG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLSKWK*QSSYLQ
Trigger: CTGTAGATAAGACGATTGTCATTTCCACTTGGAAAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGATACACAGATTATCTaGTCTCTACAAGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLDTQII*SLQGKG
Trigger: ACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGATACACAGATTATCTaGTCTCTACAAGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIDTQII*SLQGKG
Trigger: ACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTTTCCAAAGTGTTCTaGATGGGACACTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLSKVF*MGHFSF
Trigger: AAAACTGAAGTGTCCCATTCAGAACACTTTGGAAAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGCTGAATGTAATATATaGCCTTTTCTTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAAECNI*PFLEHT
Trigger: TGTATGCTCAAGAAAAGGGCATATATTACATTCAGC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCGAATTCGCAGATTTaGTTTCTGTCTATCACAATG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIANSQI*FLSITM
Trigger: CATTGTGATAGACAGAAAGCAAATCTGCGAATTCGC...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATTCAACAGAGCTTTCTaGAGTGATGGAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIFNRAF*SDGKVL
Trigger: CAGAACTTTTCCATCACTGCAGAAAGCTCTGTTGAA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCAGGTGGGTTTACATaGATTTTAAGAAGTAATGGT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKAGGFT*ILRSNG
Trigger: ACCATTACTTCTTAAAATCCATGTAAACCCACCTGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACTCGTATCAAGGACATaGCAATACAGTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALVSRT*QYSKNK
Trigger: CTTATTTTTACTGTATTGCCATGTCCTTGATACGAG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAGTATCAAATCTACTaGCAGTGCATCTTACAGTAC +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKKYQIY*QCILQY
Trigger: GTACTGTAAGATGCACTGCCAGTAGATTTGATACTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
3UTR CAA 72 bp TGGAATAGCGTGTTTAAGAGTAATAAATACAGTCTCTaGGACACGGGACTCACTTATCAGTTCATACTACAA +
Preference number: 4 (lower is better)
Translates to: WNSVFKSNKYSL*DTGLTYQFILQ
Trigger: TTGTAGTATGAACTGATAAGTGAGTCCCGTGTCCAAGAGACTGTATTTATTACTCTTAAACACGCTATTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
3UTR CAA 72 bp TACACACTTTGTTCAAGGGTATTCAACCATCTCCAATaGTTGAACAAATACACACATACGTATCTACAGCCT +
Preference number: 4 (lower is better)
Translates to: YTLCSRVFNHLQ*LNKYTHTYLQP
Trigger: AGGCTGTAGATACGTATGTGTGTATTTGTTCAACAATTGGAGATGGTTGAATACCCTTGAACAAAGTGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATATACAATAATCTGGGTTaGATGCATCACACTTACACA +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIYNNLG*MHHTYT
Trigger: TGTGTAAGTGTGATGCATTCAACCCAGATTATTGTA...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAATTCCTGTTTTTGAATaGAATTTGCTCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLIPVFE*NLLMGT
Trigger: AGTGCCCATGAGCAAATTTCATTCAAAAACAGGAAT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAACCATCTCCAATTGTTaGACAAATACACACATACGT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIITISNC*TNTHIR
Trigger: ACGTATGTGTGTATTTGTTCAACAATTGGAGATGGT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR TCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTGCCTACACTGAAATaGAAAGTATCAAATCTACTG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLPTLK*KVSNLL
Trigger: CAGTAGATTTGATACTTTTCATTTCAGTGTAGGCAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTATTGGCAGGGCTAAATTaGATCTATAAAGATTATCCC +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLAGLN*IYKDYP
Trigger: GGGATAATCTTTATAGATGCAATTTAGCCCTGCCAA...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264968.7
CDS-3UTR GCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCTGAATGTAATATATaGCCTTTTCTTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKAECNI*PFLEHT
Trigger: TGTATGCTCAAGAAAAGGGCATATATTACATTCAGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAATCCACCATTCCTTCTaGAACACCATTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLIHHSF*NTILKF
Trigger: AAATTTGAGAATGGTGTTGCAGAAGGAATGGTGGAT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAATCCACCATTCCTTCTaGAACACCATTCTCAAATTT +
Preference number: 4 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIIHHSF*NTILKF
Trigger: AAATTTGAGAATGGTGTTGCAGAAGGAATGGTGGAT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAGTCTACAATAATCTaGGTTGAATGCATCACACTT +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKKSTII*VECITL
Trigger: AAGTGTGATGCATTCAACCCAGATTATTGTAGACTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CCA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCTCGTATCAAGGACATaGCAATACAGTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: FFISNTHERSWHRETVMKLVSRT*QYSKNK
Trigger: CTTATTTTTACTGTATTGCCATGTCCTTGATACGAG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR GCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTATCTATCACAATGTTTTaGATCTTTTTCAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLSITMF*IFFRVA
Trigger: TGCAACCCTGAAAAAGATGCAAAACATTGTGATAGA...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CCA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACTCGTATCAAGGACATaGCAATACAGTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLLVSRT*QYSKNK
Trigger: CTTATTTTTACTGTATTGCCATGTCCTTGATACGAG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS TCA 90 bp CTGTTCACAACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCCCGCCGCTGGCGTCGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: LFTTVLGIVFAVFTR*CLGLFPSRRWRRRA
Trigger: AGCACGGCGACGCCAGCGGCGGGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393487.6
ENST00000460768.1
CDS GCA 90 bp GAGCCTAGCAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATGCCTCGGCCTTTTCCCTTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: EPSSNAVHNCTRDRL*GLHTLMPRPFPFPP
Trigger: CGGCGGGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTGCTAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393487.6
ENST00000460768.1
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGTGGCTACAGTTCCATaGCGGAGCCTCATCTCATTT +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSVATVP*RSLISF
Trigger: AAATGAGATGAGGCTCCGCAATGGAACTGTAGCCAC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS GCA 90 bp GAGCCTAGCAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATGCCTCGGCCTTTTCCCTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: EPSSNAVHNCTRDRL*GLHTLMPRPFPFLF
Trigger: GAATAGGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTGCTAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264968.7
CDS GCA 90 bp GAGCCTAGCAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATGCCTCGGCCTTTTCCCTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: EPSSNAVHNCTRDRL*GLHTLMPRPFPFWN
Trigger: ATTCCAGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTGCTAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409391.1
CDS GCA 90 bp GAGCCTAGCAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATGCCTCGGCCTTTTCCCTTCAGATTC +
Preference number: 5 (lower is better)
Translates to: EPSSNAVHNCTRDRL*GLHTLMPRPFPFRF
Trigger: GAATCTGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTGCTAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484936.5
CDS GCA 90 bp GAGCCTAGCAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTTaGGGTCTTCACACGCTGATGCCTCGGCCTTTTCCCTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: EPSSNAVHNCTRDRL*GLHTLMPRPFPFIV
Trigger: CACAATGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTGCTAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCCATCTTACTCTTTCTTaGGAGTCTCCAAATGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSHLTLS*ESPNVS
Trigger: GGAGACATTTGGAGACTCCAAAGAAAGAGTAAGATG...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCTCAAACTACAAACATTaGGCTGGCCCATACAGGATT +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSNYKH*AGPYRI
Trigger: AATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTGA...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCTACTCGGGATCGTCTTaGCGGTCTTCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCYSGSS*RSSHAD
Trigger: ATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTA...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCATGTCTCCTTTAGGTTaGTCAAGTCAGGATAATAGC +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSMSPLG*SSQDNS
Trigger: GCTATTATCCTGACTTGACAAACCTAAAGGAGACAT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAGCGAATTCGCAGATTaGCTTTCTGTCTATCACAAT +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSEFAD*LSVYHN
Trigger: ATTGTGATAGACAGAAAGCAAATCTGCGAATTCGCT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCAGTGCAACCACTGATTaGAGAAGATACACACTTTGT +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSSATTD*RRYTLC
Trigger: ACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCACT...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS TCA 90 bp CTGTTCACAACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCTGGAATTATATGGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LFTTVLGIVFAVFTR*CLGLFPSGIIWSFS
Trigger: GGAGAAGGACCATATAATTCCAGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409391.1
CDS-3UTR CAA 90 bp TCTCTGCCCGTCTGCAACCAACCTGCAACCCACTTGTGGCACCCCAGTGTGTCCGAAGCAGAGAGGTATTaGCAAAACATTCTCAAACTA +
Preference number: 5 (lower is better)
Translates to: SLPVCNQPATHLWHPSVSEAERY*QNILKL
Trigger: TAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTC...GGACACACTGGGGTGCCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS TCA 90 bp CTGTTCACAACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCAGATTCCAAGATGAGAACTCTA +
Preference number: 5 (lower is better)
Translates to: LFTTVLGIVFAVFTR*CLGLFPSDSKMRTL
Trigger: TAGAGTTCTCATCTTGGAATCTGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484936.5
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGGCAGGAGGATTGCTaGAGGCCAGAGATCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFRQEDC*RPEIEA
Trigger: AGCCTCGATCTCTGGCCTCAAGCAATCCTCCTGCCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCTTCTGCTTTGTCTCTaGACTTCTGCCACCAGCCCG +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFLLLCL*TSATSP
Trigger: CGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMQFPAP*LLAKAS
Trigger: AGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS TCA 90 bp ACCTTAAAACAGCAATGGTGCCTGAGGTCCTTCTGCTTTGTCTCTTaGCTTCTGCCACCAGCCCGAGAAAACTCTCTGCTCATTAAGAAT +
Preference number: 5 (lower is better)
Translates to: TLKQQWCLRSFCFVS*LLPPARENSLLIKN
Trigger: ATTCTTAATGAGCAGAGAGTTTTCTCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414521.6
CDS-3UTR CAA 90 bp ACAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTTCTACTCGGGATCGTCTTaGCGGTCTTCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: TSPTGIRNSVSSVQEYCFYSGSS*RSSHAD
Trigger: ATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTA...GAAACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTCTCCAGCGTATGCCCTaGGTAGACCTTCAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFLQRMP*VDLQGS
Trigger: ACTTCCTTGAAGGTCTACCAAGGGCATACGCTGGAG...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAGTGCAACCACTGATTaGAGAAGATACACACTTTGT +
Preference number: 5 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCSATTD*RRYTLC
Trigger: ACAAAGTGTGTATCTTCTCAAATCAGTGGTTGCACT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCACTCCTGTTCTTCCGTaGCCAATCTGTACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFTPVLP*PICTAG
Trigger: ACCTGCTGTACAGATTGGCAACGGAAGAACAGGAGT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACTCCAGCGTATGCCCTaGGTAGACCTTCAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAALQRMP*VDLQGS
Trigger: ACTTCCTTGAAGGTCTACCAAGGGCATACGCTGGAG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGGCAGGAGGATTGCTaGAGGCCAGAGATCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIRQEDC*RPEIEA
Trigger: AGCCTCGATCTCTGGCCTCAAGCAATCCTCCTGCCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GCCATGTGCATTCCTTCTCATGCAGCCCCCTCTACCTTAAAACAGCAATGGTGCAACCATCTCCAATTGTaGAACAAATACACACATACG +
Preference number: 5 (lower is better)
Translates to: AMCIPSHAAPSTLKQQWCNHLQL*NKYTHT
Trigger: CGTATGTGTGTATTTGTTCAACAATTGGAGATGGTT...GCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGAATGCACATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGCAGTTCCCAGCTCCTTaGCTGTTAGCCAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKQFPAP*LLAKAS
Trigger: AGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTG...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACCCTGGAGTGCCAGCTaGCTCCTTCCTGTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLPWSAS*LLPVCS
Trigger: GGAACAAACAGGAAGGAGCAAGCTGGCACTCCAGGG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCCTGGAGTGCCAGCTaGCTCCTTCCTGTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPWSAS*LLPVCS
Trigger: GGAACAAACAGGAAGGAGCAAGCTGGCACTCCAGGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTACTCGGGATCGTCTTaGCGGTCTTCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKYSGSS*RSSHAD
Trigger: ATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTCTGCTCCTACACGCTaGAACTGTTGCACAATCGTA +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSAPTR*NCCTIV
Trigger: TACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAGA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCTCTGCTCCTACACGCTaGAACTGTTGCACAATCGTA +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFSAPTR*NCCTIV
Trigger: TACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAGA...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGTGCAGACCAACATGTaGGAAAAGGGAAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMVQTNM*EKGRSE
Trigger: TTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCAC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCGTGCAGACCAACATGTaGGAAAAGGGAAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFVQTNM*EKGRSE
Trigger: TTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCAC...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTATCTCCAGGATGTTCTaGGTTGCCGCTATGGAACAA +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFISRMF*VAAMEQ
Trigger: TTGTTCCATAGCGGCAACCAAGAACATCCTGGAGAT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATTCATGAAACCAGAGTaGGCAACTGAGGAACCAGGG +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAFMKPE*ATEEPG
Trigger: CCCTGGTTCCTCAGTTGCCAACTCTGGTTTCATGAA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAAGGAGTCACAAGATTaGATTAGCCACCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMKESQD*ISHPQT
Trigger: TGTCTGGGGGTGGCTAATCAAATCTTGTGACTCCTT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAAGGAGTCACAAGATTaGATTAGCCACCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFKESQD*ISHPQT
Trigger: TGTCTGGGGGTGGCTAATCAAATCTTGTGACTCCTT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACTTCTGCTTTGTCTCTaGACTTCTGCCACCAGCCCG +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIILLLCL*TSATSP
Trigger: CGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGGCTGGATTCAAAGTGTaGGCCAGGCTGGGTCTTATC +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKAGFKV*ARLGLI
Trigger: GATAAGACCCAGCCTGGCCAACACTTTGAATCCAGC...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCCATCCTTACTTCCATTaGTTTCTGCTCCTACACGCT +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFHPYFH*FLLLHA
Trigger: AGCGTGTAGGAGCAGAAACAAATGGAAGTAAGGATG...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGCATCCTTACTTCCATTaGTTTCTGCTCCTACACGCT +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMHPYFH*FLLLHA
Trigger: AGCGTGTAGGAGCAGAAACAAATGGAAGTAAGGATG...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAATCTCCAGGATGTTCTaGGTTGCCGCTATGGAACAA +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAISRMF*VAAMEQ
Trigger: TTGTTCCATAGCGGCAACCAAGAACATCCTGGAGAT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGAAGGCTGAAATGGGATaGAGACTTGGATCCACCATT +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMKAEMG*RLGSTI
Trigger: AATGGTGGATCCAAGTCTCAATCCCATTTCAGCCTT...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGCTGGATTCAAAGTGTaGGCCAGGCTGGGTCTTATC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLAGFKV*ARLGLI
Trigger: GATAAGACCCAGCCTGGCCAACACTTTGAATCCAGC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS TCA 90 bp CTGATAGTGATGAGTGCAGACCAACATGTTGGAAAAGGGAAGGTCTaGAGCGAATTCGCAGATTTGCTTTCTGTCTATCACAATGTTTTG +
Preference number: 5 (lower is better)
Translates to: LIVMSADQHVGKGKV*SEFADLLSVYHNVL
Trigger: CAAAACATTGTGATAGACAGAAAGCAAATCTGCGAATTCGCTTCAGACCTTCCCTTTTCCAACATGTTGGTCTGCACTCATCACTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000414521.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAATTCTTTCTCCAGGTaGGCTACAACACCATGTACA +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFNSFSR*ATTPCT
Trigger: TGTACATGGTGTTGTAGCCAACCTGGAGAAAGAATT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGATCTCCAGGATGTTCTaGGTTGCCGCTATGGAACAA +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKISRMF*VAAMEQ
Trigger: TTGTTCCATAGCGGCAACCAAGAACATCCTGGAGAT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGTGTTTCCAAACGTTaGCACTTTGTAACACAGCAC +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSVSKR*HFVTQH
Trigger: GTGCTGTGTTACAAAGTGCAAACGTTTGGAAACACT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS TCA 90 bp GAGAAAACTCTCTGCTCATTAAGAATGGCCCAAACAGCAGAATTCTaGATAACTGAAAGTCGAAAGGCTGAAATGGGATTGAGACTTGGA +
Preference number: 5 (lower is better)
Translates to: EKTLCSLRMAQTAEF*ITESRKAEMGLRLG
Trigger: TCCAAGTCTCAATCCCATTTCAGCCTTTCGACTTTCAGTTATTCAGAATTCTGCTGTTTGGGCCATTCTTAATGAGCAGAGAGTTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAATTCTTTCTCCAGGTaGGCTACAACACCATGTACA +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAANSFSR*ATTPCT
Trigger: TGTACATGGTGTTGTAGCCAACCTGGAGAAAGAATT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTATGTCTCCTTTAGGTTaGTCAAGTCAGGATAATAGC +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFMSPLG*SSQDNS
Trigger: GCTATTATCCTGACTTGACAAACCTAAAGGAGACAT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACATCTTACTCTTTCTTaGGAGTCTCCAAATGTCTCC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAHLTLS*ESPNVS
Trigger: GGAGACATTTGGAGACTCCAAAGAAAGAGTAAGATG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTAGTAAGATCCGGCGCTaGAAACATTTTACCAATGAA +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFSKIRR*KHFTNE
Trigger: TTCATTGGTAAAATGTTTCAAGCGCCGGATCTTACT...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTGTCTATCACAATGTTTaGCATCTTTTTCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFVYHNV*HLFQGC
Trigger: GCAACCCTGAAAAAGATGCAAAACATTGTGATAGAC...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAGAACATCCCCAACAAGGTCCAGGTACATGACTTGCTACTAAAGACTTTATTCAGCGAATTCGCAGATTaGCTTTCTGTCTATCACAAT +
Preference number: 5 (lower is better)
Translates to: ENIPNKVQVHDLLLKTLFSEFAD*LSVYHN
Trigger: ATTGTGATAGACAGAAAGCAAATCTGCGAATTCGCT...GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAGGCTGAAATGGGATaGAGACTTGGATCCACCATT +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKKAEMG*RLGSTI
Trigger: AATGGTGGATCCAAGTCTCAATCCCATTTCAGCCTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAAACTAGACAACCGATaGTGTATGCAAGAGTATGGC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAKLDNR*CMQEYG
Trigger: GCCATACTCTTGCATACACAATCGGTTGTCTAGTTT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGAGAAGATACACACTTaGTTCAAGGGTATTCAACCA +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMEKIHT*FKGIQP
Trigger: TGGTTGAATACCCTTGAACAAAGTGTGTATCTTCTC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCATCAAACTACAAACATTaGGCTGGCCCATACAGGATT +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAASNYKH*AGPYRI
Trigger: AATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTGA...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAAAAGTACCAAACCCTaGGTTCCAGGACAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKKSTKP*VPGQFA
Trigger: AGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CAAGCCCCACTGGAATTAGAAATTCTGTGTCCTCTGTCCAAGAATACTGTTTCACTTACCTTTCCCATTTaGCCATGTAGTATACCAAGA +
Preference number: 5 (lower is better)
Translates to: QAPLELEILCPLSKNTVSLTFPI*PCSIPR
Trigger: TCTTGGTATACTACATGGCAAAATGGGAAAGGTAAG...TGAAACAGTATTCTTGGACAGAGGACACAGAATTTCTAATTCCAGTGGGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495056.2
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAATGTCTCCTTTAGGTTaGTCAAGTCAGGATAATAGC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAMSPLG*SSQDNS
Trigger: GCTATTATCCTGACTTGACAAACCTAAAGGAGACAT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAGTAAGATCCGGCGCTaGAAACATTTTACCAATGAA +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAASKIRR*KHFTNE
Trigger: TTCATTGGTAAAATGTTTCAAGCGCCGGATCTTACT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGTCTATCACAATGTTTaGCATCTTTTTCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAVYHNV*HLFQGC
Trigger: GCAACCCTGAAAAAGATGCAAAACATTGTGATAGAC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAAGGCTGAAATGGGATaGAGACTTGGATCCACCATT +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLKAEMG*RLGSTI
Trigger: AATGGTGGATCCAAGTCTCAATCCCATTTCAGCCTT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGAGAAGATACACACTTaGTTCAAGGGTATTCAACCA +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAEKIHT*FKGIQP
Trigger: TGGTTGAATACCCTTGAACAAAGTGTGTATCTTCTC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAGTCCAGGTACATGACTaGCTACTAAAGACTTTATTC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAVQVHD*LLKTLF
Trigger: GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGAC...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTCAAACTACAAACATTaGGCTGGCCCATACAGGATT +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKSNYKH*AGPYRI
Trigger: AATCCTGTATGGGCCAGCCAAATGTTTGTAGTTTGA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGGAAGCAGAGAGGTATTaGCAAAACATTCTCAAACTA +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMEAERY*QNILKL
Trigger: TAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTC...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp AGTGGGAATGTTACTTCGCGCAAAGTGCTTTCCCATCAATGCTCAGTTTACTTTTGGTTCCAGGACAGTTaGCTAATTACTAATACAATG +
Preference number: 5 (lower is better)
Translates to: SGNVTSRKVLSHQCSVYFWFQDS*LITNTM
Trigger: CATTGTATTAGTAATTAGCAAACTGTCCTGGAACCA...AAAGTAAACTGAGCATTGATGGGAAAGCACTTTGCGCGAAGTAACATTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTTACCAAACGCTACTCAGTAAGATGCTGCAACTTTGCCAACAAACGTCCAATGTGGTTCCAGGACAGTTaGCTAATTACTAATACAATG +
Preference number: 5 (lower is better)
Translates to: FTKRYSVRCCNFANKRPMWFQDS*LITNTM
Trigger: CATTGTATTAGTAATTAGCAAACTGTCCTGGAACCA...CATTGGACGTTTGTTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAAAAGTACCAAACCCTaGGTTCCAGGACAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLKSTKP*VPGQFA
Trigger: AGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCAAGCAAGGAATTCTCGTaGATAAGCAATCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAASKEFS*ISNQFF
Trigger: GAAAAACTGATTGCTTATCAACGAGAATTCCTTGCT...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAATTCTTTCTCCAGGTaGGCTACAACACCATGTACA +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLNSFSR*ATTPCT
Trigger: TGTACATGGTGTTGTAGCCAACCTGGAGAAAGAATT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACATCTTACTCTTTCTTaGGAGTCTCCAAATGTCTCC +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIHLTLS*ESPNVS
Trigger: GGAGACATTTGGAGACTCCAAAGAAAGAGTAAGATG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAGCAGCACCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: VMKAQSTGPVTRFSIIAAPSSNR*SLVSLL
Trigger: AAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...TGCTGCTATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAGTGTTTCCAAACGTTaGCACTTTGTAACACAGCAC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLSVSKR*HFVTQH
Trigger: GTGCTGTGTTACAAAGTGCAAACGTTTGGAAACACT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAAAACTAGACAACCGATaGTGTATGCAAGAGTATGGC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLKLDNR*CMQEYG
Trigger: GCCATACTCTTGCATACACAATCGGTTGTCTAGTTT...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAGCAAGGAATTCTCGTaGATAAGCAATCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKSKEFS*ISNQFF
Trigger: GAAAAACTGATTGCTTATCAACGAGAATTCCTTGCT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGTCTATCACAATGTTTaGCATCTTTTTCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLVYHNV*HLFQGC
Trigger: GCAACCCTGAAAAAGATGCAAAACATTGTGATAGAC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAAGCGAATTCGCAGATTaGCTTTCTGTCTATCACAAT +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIISEFAD*LSVYHN
Trigger: ATTGTGATAGACAGAAAGCAAATCTGCGAATTCGCT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGAACCATCTCCAATTGTaGAACAAATACACACATACG +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKNHLQL*NKYTHT
Trigger: CGTATGTGTGTATTTGTTCAACAATTGGAGATGGTT...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264968.7
ENST00000393487.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGTCCAGGTACATGACTaGCTACTAAAGACTTTATTC +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLVQVHD*LLKTLF
Trigger: GAATAAAGTCTTTAGTAGCAAGTCATGTACCTGGAC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp TTCTTTATTTCAAATACACATGAACGGTCGTGGCACAGAGAAACAGTGATGAAGTGGTTCCAGGACAGTTaGCTAATTACTAATACAATG +
Preference number: 5 (lower is better)
Translates to: FFISNTHERSWHRETVMKWFQDS*LITNTM
Trigger: CATTGTATTAGTAATTAGCAAACTGTCCTGGAACCA...CTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATAATTATAAACAGACTTTaGGCAGGGCTAAATTGCATC +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIIINRL*AGLNCI
Trigger: GATGCAATTTAGCCCTGCCAAAAGTCTGTTTATAAT...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264968.7
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTACCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLPSSNR*SLVSLL
Trigger: AAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp GAAACAGTGATGAAGGCACAATCAACAGGACCAGTTACTAGGTTTTCAATTATACCATCTTCTAATCGTTaGTCTTTGGTTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: ETVMKAQSTGPVTRFSIIPSSNR*SLVSLL
Trigger: AAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG...TATAATTGAAAACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS-3UTR CAA 90 bp CCTCGATACACAGATTATCTGATCTCTACAAGGCAAAGGTTATTTTTGCTCTTAGAAGCAGAGAGGTATTaGCAAAACATTCTCAAACTA +
Preference number: 5 (lower is better)
Translates to: PRYTDYLISTRQRLFLLLEAERY*QNILKL
Trigger: TAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTC...TAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCTGTGTATCGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000414521.6
CDS TCA 72 bp ACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCCCGCCGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: TVLGIVFAVFTR*CLGLFPSRRWR
Trigger: ACGCCAGCGGCGGGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393487.6
ENST00000460768.1
CDS TCA 72 bp ACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCCTATTCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: TVLGIVFAVFTR*CLGLFPSYSGE
Trigger: TTCCCCTGAATAGGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264968.7
CDS TCA 72 bp CAGCAATGGTGCCTGAGGTCCTTCTGCTTTGTCTCTTaGCTTCTGCCACCAGCCCGAGAAAACTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QQWCLRSFCFVS*LLPPARENSLL
Trigger: GAGCAGAGAGTTTTCTCGGGCTGGTGGCAGAAGTCAAGAGACAAAGCAGAAGGACCTCAGGCACCATTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414521.6
CDS CAA 72 bp CAGCAATGCTGTTCACAACTGTACTCGGGATCGTCTTaGCGGTCTTCACACGCTGATGCCTCGGCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: QQCCSQLYSGSS*RSSHADASAFS
Trigger: GGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGTTGTGAACAGCATTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000460768.1
ENST00000484936.5
ENST00000495056.2
CDS TCA 72 bp ACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCAGATTCCAAGATG +
Preference number: 6 (lower is better)
Translates to: TVLGIVFAVFTR*CLGLFPSDSKM
Trigger: CATCTTGGAATCTGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484936.5
CDS TCA 72 bp ACTGTACTCGGGATCGTCTTTGCGGTCTTCACACGCTaGTGCCTCGGCCTTTTCCCTTCTGGAATTATATGG +
Preference number: 6 (lower is better)
Translates to: TVLGIVFAVFTR*CLGLFPSGIIW
Trigger: CCATATAATTCCAGAAGGGAAAAGGCCGAGGCATCAGCGTGTGAAGACCGCAAAGACGATCCCGAGTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409391.1
CDS CAA 72 bp ATCCTCTCCCATGTAAGTTTTCTCCAGCGTATGCCCTaGGTAGACCTTCAAGGAAGTAGATACCTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: ILSHVSFLQRMP*VDLQGSRYLRR
Trigger: CCTGCGGAGGTATCTACTTCCTTGAAGGTCTACCAAGGGCATACGCTGGAGAAAACTTACATGGGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000414521.6
CDS CAA 90 bp CCAGAAGAAATCCTCTCCCATGTAAGTTTTCTCCAGCGTATGCCCTaGGTAGACCTTCAAGGAAGTAGATACCTCCGCAGGTGGGTTTAC +
Preference number: 6 (lower is better)
Translates to: PEEILSHVSFLQRMP*VDLQGSRYLRRWVY
Trigger: GTAAACCCACCTGCGGAGGTATCTACTTCCTTGAAGGTCTACCAAGGGCATACGCTGGAGAAAACTTACATGGGAGAGGATTTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000414521.6
CDS CAA 72 bp GAAGTGATAAATGCTAAAGCAGTGGCTACAGTTCCATaGCGGAGCCTCATCTCATTTCACCATCACACTGGT +
Preference number: 6 (lower is better)
Translates to: EVINAKAVATVP*RSLISFHHHTG
Trigger: ACCAGTGTGATGGTGAAATGAGATGAGGCTCCGCAATGGAACTGTAGCCACTGCTTTAGCATTTATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000460768.1
ENST00000484936.5
ENST00000495056.2
CDS CAA 90 bp GTAAGGAAGGAAGTGATAAATGCTAAAGCAGTGGCTACAGTTCCATaGCGGAGCCTCATCTCATTTCACCATCACACTGGTCCATATGTT +
Preference number: 6 (lower is better)
Translates to: VRKEVINAKAVATVP*RSLISFHHHTGPYV
Trigger: AACATATGGACCAGTGTGATGGTGAAATGAGATGAGGCTCCGCAATGGAACTGTAGCCACTGCTTTAGCATTTATCACTTCCTTCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000460768.1
ENST00000484936.5
ENST00000495056.2
CDS GCA 72 bp CTTCCATTTGTTTCTGCTCCTACACGCTTGAACTGTTaGACAATCGTATTTAATTCAGAAGAGCGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LPFVSAPTRLNC*TIVFNSEERCE
Trigger: CTCACAGCGCTCTTCTGAATTAAATACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAGAAACAAATGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000484936.5
CDS GCA 72 bp TTACACTCACAAGTGTGGAGGATTTTAAACGGCACATaGTCACCTTACTCTTTCTTTGGAGTCTCCAAATGT +
Preference number: 6 (lower is better)
Translates to: LHSQVWRILNGT*SPYSFFGVSKC
Trigger: ACATTTGGAGACTCCAAAGAAAGAGTAAGGTGAGCATGTGCCGTTTAAAATCCTCCACACTTGTGAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461884.1
CDS GCA 72 bp GCTTCAAAAATTACAATTTTAGGGTCCCTATTCTGGTaGCTAGGACTGTTTGCACGCAGATCAAAGTTCACA +
Preference number: 6 (lower is better)
Translates to: ASKITILGSLFW*LGLFARRSKFT
Trigger: TGTGAACTTTGATCTGCGTGCAAACAGTCCTAGGCACCAGAATAGGGACCCTAAAATTGTAATTTTTGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461884.1
CDS CCA 72 bp AGTGCTTCAAAAATTACAATTTTAGGGTCCCTATTCTaGTGCCTAGGACTGTTTGCACGCAGATCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: SASKITILGSLF*CLGLFARRSKF
Trigger: GAACTTTGATCTGCGTGCAAACAGTCCTAGGCACCAGAATAGGGACCCTAAAATTGTAATTTTTGAAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461884.1
CDS CAA 72 bp CTCTTTCTTTGGAGTCTCCAAATGTCTCCTTTAGGTTaGTCAAGTCAGGATAATAGCTTTCAGGGGGTGATA +
Preference number: 6 (lower is better)
Translates to: LFLWSLQMSPLG*SSQDNSFQGVI
Trigger: TATCACCCCCTGAAAGCTATTATCCTGACTTGACAAACCTAAAGGAGACATTTGGAGACTCCAAAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000414521.6
ENST00000461884.1
ENST00000492163.5
CDS GCA 72 bp AAACTTATTCAACGCATCCTTACTTCCATTTGTTTCTaGTCCTACACGCTTGAACTGTTGCACAATCGTATT +
Preference number: 6 (lower is better)
Translates to: KLIQRILTSICF*SYTLELLHNRI
Trigger: AATACGATTGTGCAACAGTTCAAGCGTGTAGGAGCAGAAACAAATGGAAGTAAGGATGCGTTGAATAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264968.7
ENST00000393487.6
ENST00000409391.1
ENST00000484936.5