RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000128268

Ensembl transcript IDs: ENST00000341184.7, ENST00000418314.1, ENST00000429402.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGTTCTCCAGGCCCCTGTGTTGGCTCACGACAGCCTGAGGGGTaGACAGAGACAGACTCAGGCACCAGCATCCCAGGGCAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: QGSPGPCVGSRQPEG*TETDSGTSIPGQPG
Trigger: ACCTGGCTGCCCTGGGATGCTGGTGCCTGAGTCTGTCTCTGTGCACCCCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGGAGAACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp CCTCCTGGACCCAAATGCATCTACTTACAGAGCCCTGGGTCCTCCTaGCAGGCCGGTCTCCCACACGGAGCCCAAGGCCCAGGGATGCCA +
Preference number: 1 (lower is better)
Translates to: PPGPKCIYLQSPGSS*QAGLPHGAQGPGMP
Trigger: TGGCATCCCTGGGCCTTGGGCTCCGTGTGGGAGACCGGCCTGCCAGGAGGACCCAGGGCTCTGTAAGTAGATGCATTTGGGTCCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp AGCTCCTCAGGGTTCTCCAGGCCCCTGTGTTGGCTCACGACAGCCTaGGGGGTGCACAGAGACAGACTCAGGCACCAGCATCCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: SSSGFSRPLCWLTTA*GVHRDRLRHQHPRA
Trigger: TGCCCTGGGATGCTGGTGCCTGAGTCTGTCTCTGTGCACCCCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGGAGAACCCTGAGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp ACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTTCCCGGATaGTTGGCATGGACAGGCCTCCTTGGGTCTAGGGGTCTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: TDVTHGWIRPAMLPG*LAWTGLLGSRGLRA
Trigger: GGCCCTGAGACCCCTAGACCCAAGGAGGCCTGTCCATGCCAAGCATCCGGGAAGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp ACAGACTCAGGCACCAGCATCCCAGGGCAGCCAGGTCCTGTCCTTTaGGGCAGGGGGTGGAGTTCTGTCTCCATCTGGCCCAGCACTTCT +
Preference number: 1 (lower is better)
Translates to: TDSGTSIPGQPGPVL*GRGWSSVSIWPSTS
Trigger: AGAAGTGCTGGGCCAGATGGAGACAGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGGCTGCCCTGGGATGCTGGTGCCTGAGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp CCCCCAAAGATCTCCCATGCTGCCCCTGGGAACCGACGTGACCCATaGGTGGATAAGGCCAGCCATGCTTCCCGGATGCTTGGCATGGAC +
Preference number: 1 (lower is better)
Translates to: PPKISHAAPGNRRDP*VDKASHASRMLGMD
Trigger: GTCCATGCCAAGCATCCGGGAAGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATGGGAGATCTTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp ACCAGCATCCCAGGGCAGCCAGGTCCTGTCCTTTGCGGCAGGGGGTaGAGTTCTGTCTCCATCTGGCCCAGCACTTCTGACTACACTGCA +
Preference number: 1 (lower is better)
Translates to: TSIPGQPGPVLCGRG*SSVSIWPSTSDYTA
Trigger: TGCAGTGTAGTCAGAAGTGCTGGGCCAGATGGAGACAGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGGCTGCCCTGGGATGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp CAAAGATCTCCCATGCTGCCCCTGGGAACCGACGTGACCCATGGGTaGATAAGGCCAGCCATGCTTCCCGGATGCTTGGCATGGACAGGC +
Preference number: 1 (lower is better)
Translates to: QRSPMLPLGTDVTHG*IRPAMLPGCLAWTG
Trigger: GCCTGTCCATGCCAAGCATCCGGGAAGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATGGGAGATCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp CACAGCAGTCTTGGCAGTCATAAGGGCCACCCAGACGTCACGGCCTaGGCCCTCTCCCAACAGGAGGGATATTTTCTGAGCTCAAAGGCC +
Preference number: 1 (lower is better)
Translates to: HSSLGSHKGHPDVTA*ALSQQEGYFLSSKA
Trigger: GGCCTTTGAGCTCAGAAAATATCCCTCCTGTTGGGAGAGGGCGCAGGCCGTGACGTCTGGGTGGCCCTTATGACTGCCAAGACTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATaGATCTACTTACAGAGCCCTGGGTCCTCCTGGCAGGCCGGTCTC +
Preference number: 1 (lower is better)
Translates to: SSLPYEVSTLPPGPK*IYLQSPGSSWQAGL
Trigger: GAGACCGGCCTGCCAGGAGGACCCAGGGCTCTGTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp CCAGGTCCTGTCCTTTGCGGCAGGGGGTGGAGTTCTGTCTCCATCTaGCCCAGCACTTCTGACTACACTGCAAAGCATCCCTCAGCACCT +
Preference number: 1 (lower is better)
Translates to: PGPVLCGRGWSSVSI*PSTSDYTAKHPSAP
Trigger: AGGTGCTGAGGGATGCTTTGCAGTGTAGTCAGAAGTGCTGGGCCAGATGGAGACAGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp CTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGTaGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGT +
Preference number: 1 (lower is better)
Translates to: LVYFCFPQAWMHTGG*ALEQPLCTQNWKVR
Trigger: ACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp AAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTaGATGCACACAGGAGGGTGGGCGCTGGAGCAGCCGCTGTGTACC +
Preference number: 1 (lower is better)
Translates to: KKWVCPLVYFCFPQA*MHTGGWALEQPLCT
Trigger: GGTACACAGCGGCTGCTCCAGCGCCCACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp TCTAGGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATaGGACATGGCAGCAGTGTGCCGGTGGTCACATTCAGCTTGGTTT +
Preference number: 1 (lower is better)
Translates to: SRGLRASYSRGERWT*DMAAVCRWSHSAWF
Trigger: AAACCAAGCTGAATGTGACCACCGGCACACTGCTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp CAGCAGTGTGCCGGTGGTCACATTCAGCTTGGTTTCCCTTCATATTaGGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGT +
Preference number: 1 (lower is better)
Translates to: QQCAGGHIQLGFPSY*GSGPGFFCPHQIPS
Trigger: ACTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGACCACCGGCACACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp GGAAACTCTGACAATGAGAGCTGGATCCGACGACTGAGTTATTGCTaGTCCCTCCCCCTCTCCCAGAGATGCTACTGGTCCCCCATATCC +
Preference number: 1 (lower is better)
Translates to: GNSDNESWIRRLSYC*SLPLSQRCYWSPIS
Trigger: GGATATGGGGGACCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGAGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp TCCGGAAACTCTGACAATGAGAGCTGGATCCGACGACTGAGTTATTaGTGCTCCCTCCCCCTCTCCCAGAGATGCTACTGGTCCCCCATA +
Preference number: 1 (lower is better)
Translates to: SGNSDNESWIRRLSY*CSLPLSQRCYWSPI
Trigger: TATGGGGGACCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGAGTTTCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp TCAGTCTTCTCCTCCCCACTTCCCCCTCAAGGCCACACCTACAACTaGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACA +
Preference number: 1 (lower is better)
Translates to: SVFSSPLPPQGHTYN*TLGLARTECTVHKT
Trigger: TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGGGGAAGTGGGGAGGAGAAGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp AGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATGAGAGCTaGATCCGACGACTGAGTTATTGCTGCTCCCTCCCCCTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: RETGASCSGNSDNES*IRRLSYCCSLPLSQ
Trigger: CTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp CAAGCTGTTCCGGAAACTCTGACAATGAGAGCTGGATCCGACGACTaGGTTATTGCTGCTCCCTCCCCCTCTCCCAGAGATGCTACTGGT +
Preference number: 1 (lower is better)
Translates to: QAVPETLTMRAGSDD*VIAAPSPSPRDATG
Trigger: ACCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGAGTTTCCGGAACAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp GACATCCCCACCAAGGCAAGCTATGAGGAACAGGAAGCATACAACTaGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCC +
Preference number: 1 (lower is better)
Translates to: DIPTKASYEEQEAYN*PYCPFLGPRQPHGP
Trigger: GGGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCTTCCTGTTCCTCATAGCTTGCCTTGGTGGGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp TGCCGGTGGTCACATTCAGCTTGGTTTCCCTTCATATTGAGGGAGTaGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGTGTATGCTG +
Preference number: 1 (lower is better)
Translates to: CRWSHSAWFPFILRE*PWVLLPPPNSQCML
Trigger: CAGCATACACTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGACCACCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp CCCTCAAGGCCACACCTACAACTGGACTCTTGGCCTTGCAAGGACTaGGTGCACAGTCCACAAGACAGCAATGTGAAAGGGAGAAGGAAC +
Preference number: 1 (lower is better)
Translates to: PSRPHLQLDSWPCKD*VHSPQDSNVKGRRN
Trigger: GTTCCTTCTCCCTTTCACATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp GACTACACTGCAAAGCATCCCTCAGCACCTCCTCTTGGTAGGATGTaGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: DYTAKHPSAPPLGRM*LFHLFPTRCPRFLL
Trigger: CAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCCACATCCTACCAAGAGGAGGTGCTGAGGGATGCTTTGCAGTGTAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 90 bp GCAGAGGTGAGCCTGCCAATTCTGGCTCATGCCTTTAGCAAAAAGTaGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATG +
Preference number: 1 (lower is better)
Translates to: AEVSLPILAHAFSKK*VCPLVYFCFPQAWM
Trigger: CATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAATTGGCAGGCTCACCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp ATCCGACGACTGAGTTATTGCTGCTCCCTCCCCCTCTCCCAGAGATaGTACTGGTCCCCCATATCCATTCTCTTCTCCTCCATCAATAAG +
Preference number: 1 (lower is better)
Translates to: IRRLSYCCSLPLSQR*YWSPISILFSSINK
Trigger: CTTATTGATGGAGGAGAAGAGAATGGATATGGGGGACCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 90 bp ATTATTGATGTCCTTACATTATGCATTTCCCAGGGTCCTGCCTTCTaGTTGGACAAGTCCCGTCTCCCCACCCAGACTCTCCCTGTTGCC +
Preference number: 1 (lower is better)
Translates to: IIDVLTLCISQGPAF*LDKSRLPTQTLPVA
Trigger: GGCAACAGGGAGAGTCTGGGTGGGGAGACGGGACTTGTCCAAGCAGAAGGCAGGACCCTGGGAAATGCATAATGTAAGGACATCAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp CTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGTaGAAGGGAGAAGGAACGTCAACGCCGGGTTTAGAACCAAAAGGA +
Preference number: 1 (lower is better)
Translates to: LGLARTECTVHKTAM*KGEGTSTPGLEPKG
Trigger: TCCTTTTGGTTCTAAACCCGGCGTTGACGTTCCTTCTCCCTTTCACATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp GCATGCACCCATGCCCATAAATATACACACACACACGCACAAACATaGGCCATTCCACAGGCCAACTCTGCAAACCGGCATCATTGGGTA +
Preference number: 1 (lower is better)
Translates to: ACTHAHKYTHTHAQT*AIPQANSANRHHWV
Trigger: TACCCAATGATGCCGGTTTGCAGAGTTGGCCTGTGGAATGGCTCATGTTTGTGCGTGTGTGTGTGTATATTTATGGGCATGGGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 90 bp GCTCAGAATCAACTCCAACAAAGACATCCCCACCAAGGCAAGCTATaGGGAACAGGAAGCATACAACTGGCCTTATTGTCCCTTTTTGGG +
Preference number: 1 (lower is better)
Translates to: AQNQLQQRHPHQGKL*GTGSIQLALLSLFG
Trigger: CCCAAAAAGGGACAATAAGGCCAGTTGTATGCTTCCTGTTCCTCATAGCTTGCCTTGGTGGGGATGTCTTTGTTGGAGTTGATTCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 90 bp GGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTaGGCAGTCATAAGGGCCACCCAGACGTCACGGCCTGCGCCCTCT +
Preference number: 2 (lower is better)
Translates to: GPPRTLQWHLLATAV*AVIRATQTSRPAPS
Trigger: AGAGGGCGCAGGCCGTGACGTCTGGGTGGCCCTTATGACTGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCCAGACGTCACGGCCTaGGCCCTCTCCCAACAGGAG +
Preference number: 2 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQPDVTA*ALSQQE
Trigger: CTCCTGTTGGGAGAGGGCGCAGGCCGTGACGTCTGG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTAGCCCTGGGTCCTCCTaGCAGGCCGGTCTCCCACAC +
Preference number: 2 (lower is better)
Translates to: PALGCTVRETGASCSGNSSPGSS*QAGLPH
Trigger: GTGTGGGAGACCGGCCTGCCAGGAGGACCCAGGGCT...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGGGCCCCCAGCCAGCCTaGCCCAAGGAAGGGCACAAC +
Preference number: 2 (lower is better)
Translates to: PFILREWPWVLLPPPNSQGPQPA*PKEGHN
Trigger: GTTGTGCCCTTCCTTGGGGCAGGCTGGCTGGGGGCC...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGAGCCCACTTCACGCTTaGCCACCAGCGGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQSPLHA*PPAAPL
Trigger: CAGAGGAGCCGCTGGTGGGCAAGCGTGAAGTGGGCT...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTTCCAGTGGCACCTCCTaGCCACAGCAGTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: HAAPGNRRDPWVDKASHASSGTS*PQQSWQ
Trigger: CTGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGA...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGTTAGCCCTGAGCTGGTaGCCTGGAGGGGCATCCCAT +
Preference number: 2 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQLALSW*PGGASH
Trigger: ATGGGATGCCCCTCCAGGGCACCAGCTCAGGGCTAA...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCTCCCCACCCACTCCTaGTCCCCTCAAGAACCAAGG +
Preference number: 2 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQLPTHS*SPQEPR
Trigger: CCTTGGTTCTTGAGGGGACCAGGAGTGGGTGGGGAG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCACGCACACTCCAGTaGCACCTCCTGGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GCALLSISASPRLGCTQEPRTLQ*HLLATA
Trigger: TGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTTGCTTCCCCCAGGCTTaGATGCACACAGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: PALGCTVRETGASCSGNSCFPQA*MHTGGW
Trigger: CCACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCA...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGCCCAGGGATGCCAAATaGTGGGCTTTTTCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: PFILREWPWVLLPPPNSQPRDAK*WAFSRP
Trigger: AGGCCGGGAAAAAGCCCACCATTTGGCATCCCTGGG...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 90 bp GCAGCAGTGTGCCGGTGGTCACATTCAGCTTGGTTTCCCTTCATATaGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: AAVCRWSHSAWFPFI*REWPWVLLPPPNSQ
Trigger: CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGACCACCGGCACACTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCTCTCTTCCCCAATCCTaGCTACCCTCCCCCGCTACC +
Preference number: 2 (lower is better)
Translates to: SIQLALLSLFGPKTASWPSLPQS*LPSPAT
Trigger: GGTAGCGGGGGAGGGTAGGCAGGATTGGGGAAGAGA...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGGGAGAGACGGATCCGTaGAGAGGACTCATGTCAGTC +
Preference number: 2 (lower is better)
Translates to: PFILREWPWVLLPPPNSQGETDP*RGLMSV
Trigger: GACTGACATGAGTCCTCTGCACGGATCCGTCTCTCC...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGCCACACCTACAACTaGACTCTTGGCCTTGCAAGG +
Preference number: 2 (lower is better)
Translates to: GCALLSISASPRLGCTQEGHTYN*TLGLAR
Trigger: CCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 90 bp CCCCACTTCCCCCTCAAGGCCACACCTACAACTGGACTCTTGGCCTaGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGTGAAAGG +
Preference number: 2 (lower is better)
Translates to: PHFPLKATPTTGLLA*QGLSAQSTRQQCER
Trigger: CCTTTCACATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGGGGAAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 90 bp TCTCCTCCCCACTTCCCCCTCAAGGCCACACCTACAACTGGACTCTaGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGT +
Preference number: 2 (lower is better)
Translates to: SPPHFPLKATPTTGL*ALQGLSAQSTRQQC
Trigger: ACATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGGGGAAGTGGGGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCTTGCAAGGACTGAGTaGACAGTCCACAAGACAGCA +
Preference number: 2 (lower is better)
Translates to: PALGCTVRETGASCSGNSLARTE*TVHKTA
Trigger: TGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTAGCAAAAAGTGGGTGTaGCCTCTTGTCTATTTCTGC +
Preference number: 2 (lower is better)
Translates to: HAAPGNRRDPWVDKASHASKKWV*PLVYFC
Trigger: GCAGAAATAGACAAGAGGGCACACCCACTTTTTGCT...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATCGACTGAGTTATTGCTaGTCCCTCCCCCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LGCTVRETGASCSGNSDNRLSYC*SLPLSQ
Trigger: CTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCG...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCCTCCTGGACCCAAATaGATCTACTTACAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: HWALNPDSAVARRCPPLLPPGPK*IYLQSP
Trigger: AGGGCTCTGTAAGTAGATGCATTTGGGTCCAGGAGG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACTGAGCTCAAAGGCCTaGCCCTTGATTCACAAGGGC +
Preference number: 2 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDALSSKA*PLIHKG
Trigger: GCCCTTGTGAATCAAGGGTCAGGCCTTTGAGCTCAG...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACCCAAGGCCCAGGGATaGCAAATGGTGGGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDAPKAQG*QMVGFF
Trigger: GAAAAAGCCCACCATTTGGCATCCCTGGGCCTTGGG...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 90 bp TGCCAATTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTaGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: CQFWLMPLAKSGCAL*SISASPRLGCTQEG
Trigger: ACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAATTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGAGGAGGGATATTTTCTaGGCTCAAAGGCCTGACCCT +
Preference number: 2 (lower is better)
Translates to: GFFISSLRGVHASSWTQMRRDIF*AQRPDP
Trigger: AGGGTCAGGCCTTTGAGCTCAGAAAATATCCCTCCT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGTCTCATTCCTCAGACTaGAAGACAGACAGACAGACA +
Preference number: 2 (lower is better)
Translates to: PFILREWPWVLLPPPNSQSHSSD*KTDRQT
Trigger: TGTCTGTCTGTCTGTCTTTCAGTCTGAGGAATGAGA...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCTCTTGGTAGGATGTaGCTTTTTCATCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GCALLSISASPRLGCTQEPLGRM*LFHLFP
Trigger: AGGGAAGAGATGAAAAAGCCACATCCTACCAAGAGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTAGGGATGCCAAATGGTaGGCTTTTTCCCGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: FWLMPLAKSGCALLSISARDAKW*AFSRPG
Trigger: GCCAGGCCGGGAAAAAGCCCACCATTTGGCATCCCT...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTGGGACAGTGGACAGCTaGGACTGGGTGTCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: FWLMPLAKSGCALLSISAGTVDS*DWVSEG
Trigger: TCCTTCTGACACCCAGTCCCAGCTGTCCACTGTCCC...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACCAGAGGCTGCCTGGTaGGATCCTGCAGGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRPEAAW*DPAGSL
Trigger: AAGAGAGCCTGCAGGATCTCACCAGGCAGCCTCTGG...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTGGCCTTGCAAGGACTaGGTGCACAGTCCACAAGAC +
Preference number: 2 (lower is better)
Translates to: FWLMPLAKSGCALLSISAWPCKD*VHSPQD
Trigger: GTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCA...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR GCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACCAGGTCCTGTCCTTTaGGGCAGGGGGTGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRPGPVL*GRGWSS
Trigger: AGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGG...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTCAAAGGCCTGACCCTTaGTTCACAAGGGCTTCAGTA +
Preference number: 2 (lower is better)
Translates to: FWLMPLAKSGCALLSISAQRPDP*FTRASV
Trigger: TACTGAAGCCCTTGTGAATCAAGGGTCAGGCCTTTG...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR TCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCACCAAGGCAAGCTATaGGGAACAGGAAGCATACAA +
Preference number: 2 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPHQGKL*GTGSIQ
Trigger: TTGTATGCTTCCTGTTCCTCATAGCTTGCCTTGGTG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp GGCACCAGCATCCCAGGGCAGCCAGGTCCTGTCCTTTaGGGCAGGGGGTGGAGTTCTGTCTCCATCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GTSIPGQPGPVL*GRGWSSVSIWP
Trigger: GGGCCAGATGGAGACAGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGGCTGCCCTGGGATGCTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp CCAGGCCCCTGTGTTGGCTCACGACAGCCTGAGGGGTaGACAGAGACAGACTCAGGCACCAGCATCCCAGGG +
Preference number: 3 (lower is better)
Translates to: PGPCVGSRQPEG*TETDSGTSIPG
Trigger: CCCTGGGATGCTGGTGCCTGAGTCTGTCTCTGTGCACCCCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp TGCCCTCTCCACCGATGGCCAGGCCTTCACTCCTGCTaGTGTGAACAGGACCTGCCCCACCAGGTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: CPLHRWPGLHSC*CEQDLPHQVCE
Trigger: CTCACAGACCTGGTGGGGCAGGTCCTGTTCACAGCAGCAGGAGTGAAGGCCTGGCCATCGGTGGAGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp AGCTGCCCTCTCCACCGATGGCCAGGCCTTCACTCCTaGTGCTGTGAACAGGACCTGCCCCACCAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: SCPLHRWPGLHS*CCEQDLPHQVC
Trigger: ACAGACCTGGTGGGGCAGGTCCTGTTCACAGCAGCAGGAGTGAAGGCCTGGCCATCGGTGGAGAGGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp CCCAAATGCATCTACTTACAGAGCCCTGGGTCCTCCTaGCAGGCCGGTCTCCCACACGGAGCCCAAGGCCCA +
Preference number: 3 (lower is better)
Translates to: PKCIYLQSPGSS*QAGLPHGAQGP
Trigger: TGGGCCTTGGGCTCCGTGTGGGAGACCGGCCTGCCAGGAGGACCCAGGGCTCTGTAAGTAGATGCATTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 72 bp GGGTTCTCCAGGCCCCTGTGTTGGCTCACGACAGCCTaGGGGGTGCACAGAGACAGACTCAGGCACCAGCAT +
Preference number: 3 (lower is better)
Translates to: GFSRPLCWLTTA*GVHRDRLRHQH
Trigger: ATGCTGGTGCCTGAGTCTGTCTCTGTGCACCCCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGGAGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 72 bp ACTCCCAAGGTGAGGCCAGGCACATGGCGGCCCCGCTaGAGACTACACTTCCCAGGTTCCCTAGCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: TPKVRPGTWRPR*RLHFPGSLAAA
Trigger: AGCAGCTGCTAGGGAACCTGGGAAGTGTAGTCTTCAGCGGGGCCGCCATGTGCCTGGCCTCACCTTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp GTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTaGATGCACACAGGAGGGTGGGCGCTGGAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: VCPLVYFCFPQA*MHTGGWALEQP
Trigger: CGGCTGCTCCAGCGCCCACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp ACCCATGGGTGGATAAGGCCAGCCATGCTTCCCGGATaGTTGGCATGGACAGGCCTCCTTGGGTCTAGGGGT +
Preference number: 3 (lower is better)
Translates to: THGWIRPAMLPG*LAWTGLLGSRG
Trigger: ACCCCTAGACCCAAGGAGGCCTGTCCATGCCAAGCATCCGGGAAGCATGGCTGGCCTTATCCACCCATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp GGCACAACAGTGACTGCACCTGGGACAGTGGACAGCTaGGACTGGGTGTCAGAAGGAAGGGGTGATGGGGAG +
Preference number: 3 (lower is better)
Translates to: GTTVTAPGTVDS*DWVSEGRGDGE
Trigger: CTCCCCATCACCCCTTCCTTCTGACACCCAGTCCCAGCTGTCCACTGTCCCAGGTGCAGTCACTGTTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp CTGGGCATGATCAGGAGCCCTGAGACTCCCTGTCCATaGGGTGCAGCCTGGCCTAGATTGACCCAGAGCCAT +
Preference number: 3 (lower is better)
Translates to: LGMIRSPETPCP*GAAWPRLTQSH
Trigger: ATGGCTCTGGGTCAATCTAGGCCAGGCTGCACCCCATGGACAGGGAGTCTCAGGGCTCCTGATCATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp ATCTCCCATGCTGCCCCTGGGAACCGACGTGACCCATaGGTGGATAAGGCCAGCCATGCTTCCCGGATGCTT +
Preference number: 3 (lower is better)
Translates to: ISHAAPGNRRDP*VDKASHASRML
Trigger: AAGCATCCGGGAAGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 72 bp CACCAGGTCTGTGAGGAAGGCAGAGCCTGGCAGCTCTaGGCTGCTCCTATCTTCCTTCGCTTAGCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: HQVCEEGRAWQL*AAPIFLRLALS
Trigger: GCTCAGGGCTAAGCGAAGGAAGATAGGAGCAGCTCAGAGCTGCCAGGCTCTGCCTTCCTCACAGACCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp CTTGGCAGTCATAAGGGCCACCCAGACGTCACGGCCTaGGCCCTCTCCCAACAGGAGGGATATTTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: LGSHKGHPDVTA*ALSQQEGYFLS
Trigger: GCTCAGAAAATATCCCTCCTGTTGGGAGAGGGCGCAGGCCGTGACGTCTGGGTGGCCCTTATGACTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp GGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTaGAAGGTGCGTATGAAGAAACGCAGAGCTGCCCTA +
Preference number: 3 (lower is better)
Translates to: GWALEQPLCTQN*KVRMKKRRAAL
Trigger: TAGGGCAGCTCTGCGTTTCTTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACTCCAGGCCCCTGTGTaGGCTCACGACAGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDALQAPV*AHDSLR
Trigger: CCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGGAG...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp TCCTCCCCACTTCCCCCTCAAGGCCACACCTACAACTaGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTC +
Preference number: 3 (lower is better)
Translates to: SSPLPPQGHTYN*TLGLARTECTV
Trigger: GACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGGGGAAGTGGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp CTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATaGGACATGGCAGCAGTGTGCCGGTGGTCACATTCA +
Preference number: 3 (lower is better)
Translates to: LRASYSRGERWT*DMAAVCRWSHS
Trigger: TGAATGTGACCACCGGCACACTGCTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGACTGGACTCTTGGCCTaGCAAGGACTGAGTGCACAG +
Preference number: 3 (lower is better)
Translates to: PFILREWPWVLLPPPNSQTGLLA*QGLSAQ
Trigger: CTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGT...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 72 bp GCCGGTGGTCACATTCAGCTTGGTTTCCCTTCATATTaGGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAA +
Preference number: 3 (lower is better)
Translates to: AGGHIQLGFPSY*GSGPGFFCPHQ
Trigger: TTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGACCACCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp GACAATGAGAGCTGGATCCGACGACTGAGTTATTGCTaGTCCCTCCCCCTCTCCCAGAGATGCTACTGGTCC +
Preference number: 3 (lower is better)
Translates to: DNESWIRRLSYC*SLPLSQRCYWS
Trigger: GGACCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp TCTGACAATGAGAGCTGGATCCGACGACTGAGTTATTaGTGCTCCCTCCCCCTCTCCCAGAGATGCTACTGG +
Preference number: 3 (lower is better)
Translates to: SDNESWIRRLSY*CSLPLSQRCYW
Trigger: CCAGTAGCATCTCTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp GTCCTTACATTATGCATTTCCCAGGGTCCTGCCTTCTaGTTGGACAAGTCCCGTCTCCCCACCCAGACTCTC +
Preference number: 3 (lower is better)
Translates to: VLTLCISQGPAF*LDKSRLPTQTL
Trigger: GAGAGTCTGGGTGGGGAGACGGGACTTGTCCAAGCAGAAGGCAGGACCCTGGGAAATGCATAATGTAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp GGAGCAAGCTGTTCCGGAAACTCTGACAATGAGAGCTaGATCCGACGACTGAGTTATTGCTGCTCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: GASCSGNSDNES*IRRLSYCCSLP
Trigger: GGGGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGAGTTTCCGGAACAGCTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp TTACATTATGCATTTCCCAGGGTCCTGCCTTCTGCTTaGACAAGTCCCGTCTCCCCACCCAGACTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LHYAFPRVLPSA*TSPVSPPRLSL
Trigger: CAGGGAGAGTCTGGGTGGGGAGACGGGACTTGTCCAAGCAGAAGGCAGGACCCTGGGAAATGCATAATGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp TTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTaGACCCAAATGCATCTACTTACAGAGCCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: FISSLRGVHASS*TQMHLLTEPWV
Trigger: GACCCAGGGCTCTGTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp GCAAAGCATCCCTCAGCACCTCCTCTTGGTAGGATGTaGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGC +
Preference number: 3 (lower is better)
Translates to: AKHPSAPPLGRM*LFHLFPTRCPR
Trigger: GCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCCACATCCTACCAAGAGGAGGTGCTGAGGGATGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp TCACATTCAGCTTGGTTTCCCTTCATATTGAGGGAGTaGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAG +
Preference number: 3 (lower is better)
Translates to: SHSAWFPFILRE*PWVLLPPPNSQ
Trigger: CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCTGGCCACAGCAGTCTaGGCAGTCATAAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPLATAV*AVIRAT
Trigger: GGTGGCCCTTATGACTGCCAAGACTGCTGTGGCCAG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp AACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGCCTCAGCACCTCCTCTaGGTAGGATGTGGCTTTTTC +
Preference number: 3 (lower is better)
Translates to: NWTLGLARTECTVHKTAMPQHLL*VGCGFF
Trigger: GAAAAAGCCACATCCTACCAAGAGGAGGTGCTGAGG...CATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR GCA 72 bp CCAATTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTaGCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PILAHAFSKKWV*PLVYFCFPQAW
Trigger: CCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CCA 72 bp AGCCTGCCAATTCTGGCTCATGCCTTTAGCAAAAAGTaGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: SLPILAHAFSKK*VCPLVYFCFPQ
Trigger: CTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAATTGGCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGAAACAAGCTTCCATCTaGCTTAAACCACTGTATTTC +
Preference number: 3 (lower is better)
Translates to: HWALNPDSAVARRCPPLLKQASI*LKPLYF
Trigger: GAAATACAGTGGTTTAAGCAAGATGGAAGCTTGTTT...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR TCA 72 bp CAACTCCAACAAAGACATCCCCACCAAGGCAAGCTATaGGGAACAGGAAGCATACAACTGGCCTTATTGTCC +
Preference number: 3 (lower is better)
Translates to: QLQQRHPHQGKL*GTGSIQLALLS
Trigger: GGACAATAAGGCCAGTTGTATGCTTCCTGTTCCTCATAGCTTGCCTTGGTGGGGATGTCTTTGTTGGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR-3UTR CAA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCATACAACTGGCCTTATaGTCCCTTTTTGGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPIQLAL*SLFGPK
Trigger: CTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTAT...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAAGGCCCCCAGCCAGCCTaGCCCAAGGAAGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQGPQPA*PKEGHN
Trigger: GTTGTGCCCTTCCTTGGGGCAGGCTGGCTGGGGGCC...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAATCTTGGTGCCGGGTTTaGAGCAGACGCCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQSWCRV*SRRRRP
Trigger: AGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGA...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAAAGATGCCCTCGGGCGTaGAGCACCAGGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQRCPRA*STRSSA
Trigger: GGCACTGCTCCTGGTGCTTCACGCCCGAGGGCATCT...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAACTGCCCAGCGACCACTaGACCAGGATGTGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQLPSDH*TRMWPV
Trigger: CACCGGCCACATCCTGGTGCAGTGGTCGCTGGGCAG...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAAGTGCTCGCTGGGGTCTaGAGGCGGGTACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQVLAGV*RRVLLL
Trigger: CAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCAC...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCCGGCGGGGAGATGCTaGCGTCCGCCGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQPAGRC*RPPQPL
Trigger: GAGAGGCTGCGGCGGACGCCAGCATCTCCCCGCCGG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCAGGGCCGAGGAGCCGTTaGCCCCCTCAGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLAGPRSR*PPQASP
Trigger: AGGAGAAGCCTGAGGGGGCCAACGGCTCCTCGGCCC...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCACCGCCGCCGTGCTCCTaGGCTCCTGGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLAPPPCS*APGRGC
Trigger: ACAACCCCTACCAGGAGCCCAGGAGCACGGCGGCGG...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAACCCAGGGATGCCAAATaGTGGGCTTTTTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQPRDAK*WAFSRP
Trigger: AGGCCGGGAAAAAGCCCACCATTTGGCATCCCTGGG...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAAGGGCAGTCCCCTAGATaGGAGCAAAGTGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQGQSPR*EQSGSE
Trigger: CTCTGAGCCACTTTGCTCCCATCTAGGGGACTGCCC...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTGTCCACCGTGCAGCCTaGCACCACCTCCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHAVHRAA*HHLQGA
Trigger: GGCACCCTGGAGGTGGTGTCAGGCTGCACGGTGGAC...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGCTCCTCGGCCGCCTTaGTGGGCGGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSAPRPP*WAAAAA
Trigger: TGCAGCCGCTGCCGCCCAGCAAGGCGGCCGAGGAGC...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCGCAGCTGGGTCCGTaGCAGCCGGGCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEPQLGP*QPGRHT
Trigger: CGTGTGCCTGCCCGGCTGGCACGGACCCAGCTGCGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGGGCGGCGCAGGCGGATaGCGTCCAGCCCATACACTG +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQGGAGG*RPAHTL
Trigger: CAGTGTATGGGCTGGACGGCATCCGCCTGCGCCGCC...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTGCAGGCGGGTACTCCTaGTGCGTGCCGTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHAAGGYS*CVPSNQ
Trigger: CTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGC...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCCGCCTCGTCCAGTTTaGCCCGGGCGGGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLPPRPV*PGRAAF
Trigger: GAAGGCCGCCCGCCCGGGGCAAACTGGACGAGGCGG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAAAGCAGGTCGAACTCGTaGTTGACGTTGATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQSRSNS*LTLMAL
Trigger: CAACGCCATCAACGTCAACCACGAGTTCGACCTGCT...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp CGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTaGGCAGTCATAAGGGCCACCCAGACGTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RTLQWHLLATAV*AVIRATQTSRP
Trigger: AGGCCGTGACGTCTGGGTGGCCCTTATGACTGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAACGGCCATACAGAACATaGGAAAGAGCTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: AGGREIALGAAATPALSQRPYRT*ERACSV
Trigger: GACGCTACAAGCTCTTTCTCATGTTCTGTATGGCCG...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCAACACCACCTCCAGGGTaGCCGGCTGCTTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLATPPPG*PAASRR
Trigger: TCTTCTGGAAGCAGCCGGGCACCCTGGAGGTGGTGT...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTCCCTTCCCACAGAGCTaGAAGCTCCTCACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHAPFPQS*KLLTAP
Trigger: GGGGGCAGTGAGGAGCTTGCAGCTCTGTGGGAAGGG...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAAGGGGCCGAGAGGGGCTaGGGAGGTAGTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYEGAERG*GGSGLS
Trigger: TGAGAGCCCACTACCTCCCCAGCCCCTCTCGGCCCC...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTAGGATGCCAGGGGCGTaGGGGTGGGAAAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHARMPGA*GWESCQ
Trigger: TTGGCAGCTTTCCCACCCCCACGCCCCTGGCATCCT...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTCCAGAGGCTGCCTGGTaGGATCCTGCAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHAPEAAW*DPAGSL
Trigger: AAGAGAGCCTGCAGGATCTCACCAGGCAGCCTCTGG...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCAGCCCTCTGACAGCTaGCCTCTCCACCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQQPSDS*PLHRWP
Trigger: TGGCCATCGGTGGAGAGGGCAGCTGTCAGAGGGCTG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCACAGGGTCCTGCCTTCTaGTTGGACAAGTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLAQGPAF*LDKSRL
Trigger: GAGACGGGACTTGTCCAAGCAGAAGGCAGGACCCTG...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCATCCCATCGCCCGCTaGGTCTCAGCAACGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSHPIAR*VSATAA
Trigger: TGCCGCCGTTGCTGAGACCCAGCGGGCGATGGGATG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGGGCTCGGGGCTGGCCTaGGGCGTGACCGGGGCATTG +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMGSGLA*GVTGAL
Trigger: CAATGCCCCGGTCACGCCCCAGGCCAGCCCCGAGCC...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCCTCGGCCGCCTTGCTaGGCGGCAGCGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYPRPPC*AAAAAA
Trigger: TGCTGCAGCCGCTGCCGCCCAGCAAGGCGGCCGAGG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTCTCCCCACCCACTCCTaGTCCCCTCAAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHALPTHS*SPQEPR
Trigger: CCTTGGTTCTTGAGGGGACCAGGAGTGGGTGGGGAG...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCACTTTGCGGCAGGGGGTaGAGTTCTGTCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLALCGRG*SSVSIW
Trigger: CCAGATGGAGACAGAACTCCACCCCCTGCCGCAAAG...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCAAGCCATCGTAGAGCTTaGGGAAAAGGACGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLASHRRA*GKGRRH
Trigger: GTGACGGCGTCCTTTTCCTCAAGCTCTACGATGGCT...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACATCCCCGGCGGGGAGATaGTGGCGTCCGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTSPAGR*WRPPQP
Trigger: AGGCTGCGGCGGACGCCAGCATCTCCCCGCCGGGGA...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACACTGGGCGGCAGCGGCTaGAGCAGGGGCGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTLGGSG*SRGEWE
Trigger: CTCCCACTCGCCCCTGCTGCAGCCGCTGCCGCCCAG...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGCGCCGCCGGCCTTGGTaGGCACGAAATACTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQRRRPW*ARNTRW
Trigger: CCACCGAGTATTTCGTGCGCACCAAGGCCGGCGGCG...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACACGTCGGGCCGCAGGTTaGGCAGCCGCGAGACGCCGT +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTRRAAG*AAARRR
Trigger: ACGGCGTCTCGCGGCTGCGCAACCTGCGGCCCGACG...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATTGCCAGCCGGCGAAGTaGAGGGGGCTGCCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNCQPAK*RGLPSD
Trigger: GTCGCTGGGCAGCCCCCTGCACTTCGCCGGCTGGCA...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAACCCGCCCGCCGCCGTaGTCCTGGGCTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTTRPPP*SWAPGR
Trigger: CCTACCAGGAGCCCAGGAGCACGGCGGCGGGCGGGT...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTAGCCCACTTCACGCTTaGCCACCAGCGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSSPLHA*PPAAPL
Trigger: CAGAGGAGCCGCTGGTGGGCAAGCGTGAAGTGGGCT...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTCCTTGGTGGGCAGGTTaGAGTACTGCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: HAAPGNRRDPWVDKASHAPWWAG*STAPQW
Trigger: CCACTGTGGTGCAGTACTCCAACCTGCCCACCAAGG...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCAGGCGCGGCACCTCCCTaGGCACCAGCCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDAGAAPP*APAAPW
Trigger: CCAAGGAGCGGCTGGTGCCCAGGGAGGTGCCGCGCC...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGTCCAGTGGCACCTCCTaGCCACAGCAGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQSSGTS*PQQSWQ
Trigger: CTGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGA...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp GAGACTCCCTGTCCATGGGGTGCAGCCTGGCCTAGATaGACCCAGAGCCATAGGGACCCCGAGTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ETPCPWGAAWPR*TQSHRDPECLS
Trigger: GCTCAAACACTCGGGGTCCCTATGGCTCTGGGTCAATCTAGGCCAGGCTGCACCCCATGGACAGGGAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATAGGGGACAGGTGGGATaGTGCGGCTGGGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNRGQVG*CGWGRE
Trigger: CTCTCGGCCCCAGCCGCATCATCCCACCTGTCCCCT...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGGGGACCCCGAGTGTTTaGGCCACCTCTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLGTPSV*ATSQPQ
Trigger: TTGGGGCTGAGAGGTGGCTCAAACACTCGGGGTCCC...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCATGATCAGGAGCCCTaGGACTCCCTGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSHDQEP*DSLSMG
Trigger: CCCCATGGACAGGGAGTCTCAGGGCTCCTGATCATG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGCATCCCATAGCAACTaGGGATGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEASHSN*GCQGRG
Trigger: CCCACGCCCCTGGCATCCTCAGTTGCTATGGGATGC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGCAGGTTGGAGTACTaGACCACAGTGGGCACGCCG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEGRLEY*TTVGTP
Trigger: CGGCGTGCCCACTGTGGTGCAGTACTCCAACCTGCC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGGTCCAGCCCATACACTaGCTGCAGCATGTCCACCGT +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQVQPIH*LQHVHR
Trigger: ACGGTGGACATGCTGCAGGCAGTGTATGGGCTGGAC...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCCGAACCAGCCCCCGGTaGGGATCAGGCCGCGGATGT +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPRTSPR*GSGRGC
Trigger: ACATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCG...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACGGTACTCCTGCTGCGTaGCGTCGAACCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYGTPAA*RRTSPR
Trigger: CCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACC...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTTTGGGCGCATACATGTaGTCGCTGGGGTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSLGAYM*SLGSAG
Trigger: GCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAA...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGGCCTTCACTCCTGCTaGTGTGAACAGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSGLHSC*CEQDLP
Trigger: GGGCAGGTCCTGTTCACAGCAGCAGGAGTGAAGGCC...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGGCACGAAATACTCGGTaGTGTCCTCGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQARNTR*CPRAAP
Trigger: TGGTGCTGCCCGAGGACACCACCGAGTATTTCGTGC...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAAGCACCAGCCGCTCCTTaGTGGGCAGGTTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYEAPAAP*WAGWST
Trigger: AGTACTCCAACCTGCCCACCAAGGAGCGGCTGGTGC...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTAGCGACTTGCGCATGTaGAAGGCGAAGGGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSSDLRM*KAKGSV
Trigger: GACCGAGCCCTTCGCCTTCCACATGCGCAAGTCGCT...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACAGCCCTGGGTCCTCCTaGCAGGCCGGTCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYSPGSS*QAGLPH
Trigger: GTGTGGGAGACCGGCCTGCCAGGAGGACCCAGGGCT...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCCAAGACAGCCTCATaGCCCCTTTCTGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEPKTAS*PLSGPQ
Trigger: CTGGGGGCCAGAAAGGGGCCATGAGGCTGTCTTGGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACCCAGGGGCGTGGGGGTaGGAAAGCTGCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYPGAWG*ESCQGG
Trigger: CCCTCCTTGGCAGCTTTCCCACCCCCACGCCCCTGG...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGTGCCCTCTCCACCGATaGCCAGGCCTTCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQECPLHR*PGLHSC
Trigger: GCAGGAGTGAAGGCCTGGCCATCGGTGGAGAGGGCA...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATaGGAAGGTGCGTATGAAGAAACGCAGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPE*EGAYEETQSCP
Trigger: AGGGCAGCTCTGCGTTTCTTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGAAGGGCACAACAGTaGCTGCACCTGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEGRAQQ*LHLGQW
Trigger: CCACTGTCCCAGGTGCAGTCACTGTTGTGCCCTTCC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGGCAGCATGTCCACCGTaGAGCCTGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQAACPP*SLTPPP
Trigger: TGGAGGTGGTGTCAGGCTGCACGGTGGACATGCTGC...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCCAGACGTCACGGCCTaGGCCCTCTCCCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMPDVTA*ALSQQE
Trigger: CTCCTGTTGGGAGAGGGCGCAGGCCGTGACGTCTGG...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGTCTCTTCCCCAATCCTaGCTACCCTCCCCCGCTACC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLSLPQS*LPSPAT
Trigger: GGTAGCGGGGGAGGGTAGGCAGGATTGGGGAAGAGA...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCACCTCCTGGACCCAAATaGATCTACTTACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLAPPGPK*IYLQSP
Trigger: AGGGCTCTGTAAGTAGATGCATTTGGGTCCAGGAGG...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CAGGGACCACCACGCACACTCCAGTGGCACCTCCTGGCCACAGCAGTCTTGGCACTTGCAAGGACTGAGTaGACAGTCCACAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QGPPRTLQWHLLATAVLALARTE*TVHKTA
Trigger: TGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAG...TGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGGTGGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCTCCCCCAGGCTTGGATaGACACAGGAGGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPSPRLG*TQEGGR
Trigger: GCGCCCACCCTCCTGTGTGCATCCAAGCCTGGGGGA...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCAGCTCCCCACACCATaGCCTCACTGGGCACTTAAC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSQLPTP*PHWALN
Trigger: GTTAAGTGCCCAGTGAGGGCATGGTGTGGGGAGCTG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGGCCATGCTTCCCGGATaGTTGGCATGGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLAMLPG*LAWTGL
Trigger: GAGGCCTGTCCATGCCAAGCATCCGGGAAGCATGGC...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCCCAAAGATCTCCCATaGTGCCCCTGGGAACCGACG +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLPKDLP*CPWEPT
Trigger: CGTCGGTTCCCAGGGGCAGCATGGGAGATCTTTGGG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCGAGTGGGAGTAGAGTaGGGTACGCAGCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLRVGVE*GTQQVR
Trigger: CCTGACCTGCTGCGTACCCCACTCTACTCCCACTCG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGACCAAGTCCACCCGGTaGAGCTCCTCGGCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMTKSTR*SSSAAL
Trigger: CAAGGCGGCCGAGGAGCTCCACCGGGTGGACTTGGT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGCCAGCCGCTCCTTGGTaGGCAGGTTGGAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQPAAPW*AGWSTA
Trigger: TGCAGTACTCCAACCTGCCCACCAAGGAGCGGCTGG...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCGCTTAGCCCTGAGCTaGTGCCCTGGAGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYRLALS*CPGGAS
Trigger: GGATGCCCCTCCAGGGCACCAGCTCAGGGCTAAGCG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGGCTCCCCATAAGCCGTaGAGTTGGACTCGCACACCA +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLAPHKP*SWTRTP
Trigger: TGGTGTGCGAGTCCAACTTCACGGCTTATGGGGAGC...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCTGAGCTCAAAGGCCTaGCCCTTGATTCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSLSSKA*PLIHKG
Trigger: GCCCTTGTGAATCAAGGGTCAGGCCTTTGAGCTCAG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAATGGCCTTGCAAGGACTaGGTGCACAGTCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYEWPCKD*VHSPQD
Trigger: GTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCA...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAAAGAGCCTGGCAGCTCTaGGCTGCTCCTATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYERAWQL*AAPIFL
Trigger: AAGGAAGATAGGAGCAGCTCAGAGCTGCCAGGCTCT...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGAGCCGTAGAGCGACTTaGGCATGTGGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQESRRAT*ACGRRR
Trigger: CCTTCGCCTTCCACATGCGCAAGTCGCTCTACGGCT...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGAAGCACCAGGAGCAGTaGCAGCCGGCGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMKHQEQ*QPAKCR
Trigger: CCTGCACTTCGCCGGCTGGCACTGCTCCTGGTGCTT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCGACGACTGAGTTATTaGTGCTCCCTCCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLRRLSY*CSLPLS
Trigger: GGAGAGGGGGAGGGAGCAGCAATAACTCAGTCGTCG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGGCTGTCGCAAGAAGATaGCCTCCTCTCCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLAVARR*PPLLAH
Trigger: ATGGGCCAGGAGAGGAGGGCATCTTCTTGCGACAGC...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCTGGGCACGCCGCAGCTaGGTCCGTGCCAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPWARRS*VRASRA
Trigger: TGCCCGGCTGGCACGGACCCAGCTGCGGCGTGCCCA...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATAGTACTGCACCACAGTaGGCACGCCGCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNSTAPQ*ARRSWV
Trigger: GACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACT...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCACTGCACCAGGATGTaGCCGGTGCGGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLHCTRM*PVRFSY
Trigger: GTATGAGAACCGCACCGGCCACATCCTGGTGCAGTG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCATACATGTGCTCGCTaGGGTCTGCAGGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLHTCAR*GLQAGT
Trigger: AGTACCCGCCTGCAGACCCCAGCGAGCACATGTATG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCCCACGCACACTCCAGTaGCACCTCCTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPPRTLQ*HLLATA
Trigger: TGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTGG...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGGTGGACAGCTGGGACTaGGTGTCAGAAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLVDSWD*VSEGRG
Trigger: ACCCCTTCCTTCTGACACCCAGTCCCAGCTGTCCAC...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGAGTGCAGGAAGGAGATaGGGCACAGGCCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMSAGRR*GTGRPY
Trigger: GTATGGCCGGCCTGTGCCTCATCTCCTTCCTGCACT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAAGACGCCGTCCTGGGTaGGGAAGGTGCGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTRRRPG*GRCAGS
Trigger: ACTACCTGCGCACCTTCCTCACCCAGGACGGCGTCT...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATCCCTGGGCTGCACAGTaGGGGAAACAGGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNPWAAQ*GKQEQA
Trigger: AGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGG...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGGGTTTCCCTTCATATTaGGGGAGTGGCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQGFPSY*GSGPGF
Trigger: GAACCCAGGGCCACTCCCTCAATATGAAGGGAAACC...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAAGGATGTACTCGAAGGTaGCATTGGTCAGCATCTCCC +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYEGCTRR*HWSASP
Trigger: GGGAGATGCTGACCAATGGCACCTTCGAGTACATCC...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGCCCAAGGCCCAGGGATaGCAAATGGTGGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQPKAQG*QMVGFF
Trigger: GAAAAAGCCCACCATTTGGCATCCCTGGGCCTTGGG...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACCCAGGTCCTGTCCTTTaGGGCAGGGGGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYPGPVL*GRGWSS
Trigger: AGAACTCCACCCCCTGCCGCAAAGGACAGGACCTGG...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCCTCTTGTCTATTTCTaGTTCCCCCAGGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQPLVYF*FPQAWM
Trigger: CATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACTTAGCCCTGAGCTGGTaGCCTGGAGGGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYLALSW*PGGASH
Trigger: ATGGGATGCCCCTCCAGGGCACCAGCTCAGGGCTAA...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGAGACGCCGCCGGCCTTaGTGCGCACGAAATACTCGG +
Preference number: 4 (lower is better)
Translates to: NWTLGLARTECTVHKTAMRRRRP*CARNTR
Trigger: CCGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCT...CATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACGTAGTCACCCCAGCGTaGGAAGTCGCCATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYVVTPA*EVAILG
Trigger: GCCCAGAATGGCGACTTCCCACGCTGGGGTGACTAC...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAATCTTCAGCAGGTACTTaGGCGCATACATGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYESSAGT*AHTCAR
Trigger: GCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGA...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCCATGGGGTGCAGCCTaGCCTAGATTGACCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYPWGAA*PRLTQS
Trigger: GCTCTGGGTCAATCTAGGCCAGGCTGCACCCCATGG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGAGAAAGGTGGACATaGGACATGGCAGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEGERWT*DMAAVC
Trigger: GCACACTGCTGCCATGTCCCATGTCCACCTTTCTCC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATCCCGGATGCTTGGCATaGACAGGCCTCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNPGCLA*TGLLGS
Trigger: AGACCCAAGGAGGCCTGTCCATGCCAAGCATCCGGG...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp TGCCGGTGGTCACATTCAGCTTGGTTTCCCTTCATATaGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: CRWSHSAWFPFI*REWPWVLLPPP
Trigger: TGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGGAAACCAAGCTGAATGTGACCACCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTGCATCTCCCGGAACTTaGGCGGCCGCGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FWLMPLAKSGCALLSISAASPGT*AAAAPH
Trigger: ATGGGGAGCCGCGGCCGCTCAAGTTCCGGGAGATGC...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCAAAGGCCTGACCCTTaGTTCACAAGGGCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSQRPDP*FTRASV
Trigger: TACTGAAGCCCTTGTGAATCAAGGGTCAGGCCTTTG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACTGAGTCCCAGCCAATaGGAGGCCAGCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDALSPSQ*EASRGE
Trigger: CTCACCTCTGCTGGCCTCTCATTGGCTGGGACTCAG...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGACACACGCACAAACATaGGCCATTCCACAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLTHAQT*AIPQAN
Trigger: GTTGGCCTGTGGAATGGCTCATGTTTGTGCGTGTGT...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACACAGCCTGGCCTAGATTaGCCCAGAGCCATAGGGACC +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTQPGLD*PRAIGT
Trigger: GGTCCCTATGGCTCTGGGTCAATCTAGGCCAGGCTG...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGGCTGGATCGAGTGTGTaGGTGTGCGAGCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMAGSSV*VCERVC
Trigger: ACACACTCGCTCGCACACGCACACACTCGATCCAGC...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACAGCCCATACACTGCCTaGAGCATGTCCACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYSPYTA*SMSTVQ
Trigger: CTGCACGGTGGACATGCTGCAGGCAGTGTATGGGCT...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACCCAGGCCTTCACTCCTaGTGCTGTGAACAGGACCTG +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYPGLHS*CCEQDL
Trigger: CAGGTCCTGTTCACAGCAGCAGGAGTGAAGGCCTGG...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCAACTCTTCAATCCTGTaGCCTGGCCCCCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPNSSIL*PGPQPS
Trigger: AGAGGGCTGGGGGCCAGGGCACAGGATTGAAGAGTT...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGGGGAAGTCGCCATTCTaGGCGGACACGAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMGKSPF*ADTSLK
Trigger: CTTCAAGCTCGTGTCCGCCCAGAATGGCGACTTCCC...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACGGGACAGTGGACAGCTaGGACTGGGTGTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYGTVDS*DWVSEG
Trigger: TCCTTCTGACACCCAGTCCCAGCTGTCCACTGTCCC...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCAGGAGGGTGGGCGCTaGAGCAGCCGCTGTGTACCC +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPQEGGR*SSRCVP
Trigger: GGGTACACAGCGGCTGCTCCAGCGCCCACCCTCCTG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCATGCTTCCCCCAGGCTTaGATGCACACAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDACFPQA*MHTGGW
Trigger: CCACCCTCCTGTGTGCATCCAAGCCTGGGGGAAGCA...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAAACCGGCATCATTaGGTAGCGTCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTANRHH*VASEGP
Trigger: CGGCCCCTCAGACGCTACCCAATGATGCCGGTTTGC...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGAGACTCCCTGTCCATaGGGTGCAGCCTGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTETPCP*GAAWPR
Trigger: TCTAGGCCAGGCTGCACCCCATGGACAGGGAGTCTC...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCTGCTTCCCGGATGCTTaGCATGGACAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPCFPDA*HGQASL
Trigger: CAAGGAGGCCTGTCCATGCCAAGCATCCGGGAAGCA...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATGTCCTGCCTTCTGCTTaGACAAGTCCCGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNVLPSA*TSPVSP
Trigger: TGGGGAGACGGGACTTGTCCAAGCAGAAGGCAGGAC...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp CCCCTCAAGGCCACACCTACAACTGGACTCTTGGCCTaGCAAGGACTGAGTGCACAGTCCACAAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: PLKATPTTGLLA*QGLSAQSTRQQ
Trigger: TTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTGGGCGGACACGAGCTTaGAGTAGATGCCCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: FWLMPLAKSGCALLSISAGRTRA*SRCPRA
Trigger: CGCCCGAGGGCATCTACTTCAAGCTCGTGTCCGCCC...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp AACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGGCTGGATCCGACGACTaGGTTATTGCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NWTLGLARTECTVHKTAMAGSDD*VIAAPS
Trigger: GGAGGGAGCAGCAATAACTCAGTCGTCGGATCCAGC...CATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGTCTCATTCCTCAGACTaGAAGACAGACAGACAGACA +
Preference number: 4 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQSHSSD*KTDRQT
Trigger: TGTCTGTCTGTCTGTCTTTCAGTCTGAGGAATGAGA...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCGAAGTGCAGGGGGCTaGCCAGCGACCACTGCACCA +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPRSAGG*PATTAP
Trigger: TGGTGCAGTGGTCGCTGGGCAGCCCCCTGCACTTCG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGGGAGAGACGGATCCGTaGAGAGGACTCATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMGETDP*RGLMSV
Trigger: GACTGACATGAGTCCTCTGCACGGATCCGTCTCTCC...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATGACATGGCAGCAGTGTaGCGGTGGTCACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNDMAAV*RWSHSA
Trigger: AGCTGAATGTGACCACCGGCACACTGCTGCCATGTC...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCGGCCACACCTACAACTaGACTCTTGGCCTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPGHTYN*TLGLAR
Trigger: CCTTGCAAGGCCAAGAGTCCAGTTGTAGGTGTGGCC...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCTGCCTCAGTCATTTTaGGGAGCTGCAGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYLPQSF*GAAGGV
Trigger: CACACCTCCTGCAGCTCCCCAAAATGACTGAGGCAG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACACTGGCCCAGCACTTCTaGCTACACTGCAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTLAQHF*LHCKAS
Trigger: GGATGCTTTGCAGTGTAGTCAGAAGTGCTGGGCCAG...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGATCATTGGGTAGCGTCTaGGGGGCCGAGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRSLGSV*GAEGRG
Trigger: CCCCCTCCCCTCGGCCCCTCAGACGCTACCCAATGA...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGAAAGGAAGGCTGCTGTaGCTTCAAAGGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: PFILREWPWVLLPPPNSQKGRLL*LQRSSM
Trigger: CATGGAACTCCTTTGAAGTCACAGCAGCCTTCCTTT...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTAGCAAAAAGTGGGTGTaGCCTCTTGTCTATTTCTGC +
Preference number: 4 (lower is better)
Translates to: PALGCTVRETGASCSGNSSKKWV*PLVYFC
Trigger: GCAGAAATAGACAAGAGGGCACACCCACTTTTTGCT...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCCTGGCAGCTCTGAGCTaGTCCTATCTTCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SIQLALLSLFGPKTASWPLAALS*SYLPSL
Trigger: AAGCGAAGGAAGATAGGAGCAGCTCAGAGCTGCCAG...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATACTCGAAGGTGCCATTaGTCAGCATCTCCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNTRRCH*SASPGT
Trigger: AGTTCCGGGAGATGCTGACCAATGGCACCTTCGAGT...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp AGGGTGGGCGCTGGAGCAGCCGCTGTGTACCCAGAATTGGAAGGTGCGTATGAATCTGACAATGAGAGCTaGATCCGACGACTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: RVGAGAAAVYPELEGAYESDNES*IRRLSY
Trigger: ATAACTCAGTCGTCGGATCCAGCTCTCATTGTCAGA...TTCATACGCACCTTCCAATTCTGGGTACACAGCGGCTGCTCCAGCGCCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTGACAATTTCATATTGAGGGAGTaGCCCTGGGTTCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGCTVRETGASCSGNSDNFILRE*PWVLLP
Trigger: GGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAA...ATTGTCAGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACAGGAGGGATATTTTCTaGGCTCAAAGGCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYRRDIF*AQRPDP
Trigger: AGGGTCAGGCCTTTGAGCTCAGAAAATATCCCTCCT...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACGGTTCTCATACTGTCTaGAGTTGGGCATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYGSHTV*SWAWCS
Trigger: ACTACACCATGCCCAACTTCAGACAGTATGAGAACC...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTCGACTGAGTTATTGCTaGTCCCTCCCCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FWLMPLAKSGCALLSISARLSYC*SLPLSQ
Trigger: CTGGGAGAGGGGGAGGGAGCAGCAATAACTCAGTCG...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACGATGTCCTTACATTATaGATTTCCCAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYDVLTL*ISQGPA
Trigger: GGCAGGACCCTGGGAAATGCATAATGTAAGGACATC...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGTCCACGCTTCCTCCTaGACCCAAATGCATCTACTT +
Preference number: 4 (lower is better)
Translates to: TYNWTLGLARTECTVHKTVHASS*TQMHLL
Trigger: AAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGAC...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCAGGAAGCATACAACTaGCCTTATTGTCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: HWALNPDSAVARRCPPLLQEAYN*PYCPFL
Trigger: CAAAAAGGGACAATAAGGCCAGTTGTATGCTTCCTG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCAACAGTGACTGCACCTaGGACAGTGGACAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPNSDCT*DSGQLG
Trigger: TCCCAGCTGTCCACTGTCCCAGGTGCAGTCACTGTT...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCAACCGACGTGACCCATaGGTGGATAAGGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPNRRDP*VDKASH
Trigger: ATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTT...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
3UTR CAA 72 bp CTGACTACACTGCAAAGCATCCCTCAGCACCTCCTCTaGGTAGGATGTGGCTTTTTCATCTCTTCCCTACGA +
Preference number: 4 (lower is better)
Translates to: LTTLQSIPQHLL*VGCGFFISSLR
Trigger: TCGTAGGGAAGAGATGAAAAAGCCACATCCTACCAAGAGGAGGTGCTGAGGGATGCTTTGCAGTGTAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR TCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCTTTAAGGGTGAAATaGAATCCAACCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQEPLRVK*NPTIYR
Trigger: TCTGTAAATGGTTGGATTTCATTTCACCCTTAAAGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGAACAGAAAGGAAGGCTaGTGTGACTTCAAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GFFISSLRGVHASSWTQMNRKEG*CDFKGV
Trigger: AACTCCTTTGAAGTCACAGCAGCCTTCCTTTCTGTT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAGGCCCTGGGTTCTTCTaGCCCCACCAAATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRGPGFF*PHQIPS
Trigger: ACTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCC...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCATTTCCCAGGGTCCTaGCTTCTGCTTGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPHFPGS*LLLGQV
Trigger: GACTTGTCCAAGCAGAAGGCAGGACCCTGGGAAATG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAAGGGATGCCAAATGGTaGGCTTTTTCCCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRRDAKW*AFSRPG
Trigger: GCCAGGCCGGGAAAAAGCCCACCATTTGGCATCCCT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTACACCATGCCCTCACTaGGCACTTAACCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: FWLMPLAKSGCALLSISATPCPH*ALNPDS
Trigger: ACTGTCTGGGTTAAGTGCCCAGTGAGGGCATGGTGT...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGAACAAGCTTCCATCTTaGTTAAACCACTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GCALLSISASPRLGCTQENKLPS*LNHCIS
Trigger: TGAAATACAGTGGTTTAAGCAAGATGGAAGCTTGTT...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAGCAGCAGTGTGCCGGTaGTCACATTCAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRAAVCR*SHSAWF
Trigger: AAACCAAGCTGAATGTGACCACCGGCACACTGCTGC...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CCA 90 bp TTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGACATCCCCCTCTTGGTAGGATGTaGCTTTTTCATCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FQGLLITAAQNQLQQRHPPLGRM*LFHLFP
Trigger: AGGGAAGAGATGAAAAAGCCACATCCTACCAAGAGG...GGGATGTCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR GCA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAAACCCTATCAGATCATaGAGCTCTAGACTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRNPIRS*SSRLPP
Trigger: AGGCGGAAGTCTAGAGCTGCATGATCTGATAGGGTT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GCAGGAGGCAGGGAGATAGCGCTAGGGGCCGCCGCCACCCCCGCCCTGTCACAATCGTCGGGCCGCAGGTaGCGCAGCCGCGAGACGCCG +
Preference number: 5 (lower is better)
Translates to: AGGREIALGAAATPALSQSSGRR*RSRETP
Trigger: CGGCGTCTCGCGGCTGCGCAACCTGCGGCCCGACGA...TTGTGACAGGGCGGGGGTGGCGGCGGCCCCTAGCGCTATCTCCCTGCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 90 bp CGTCGTCGGGCCGCAGGTTGCGCAGCCGCGAGACGCCGTCCTGGGTaGGGAAGGTGCGCAGGTAGTCGTCGGCGATCCAGCCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: RRRAAGCAAARRRPG*GRCAGSRRRSSRPA
Trigger: GGCAGGACGGCTGGATCGCCGACGACTACCTGCGCACCTTCCTCACCCAGGACGGCGTCTCGCGGCTGCGCAACCTGCGGCCCGACGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp GGCGCGGCACCTCCCTGGGCACCAGCCGCTCCTTGGTGGGCAGGTTaGAGTACTGCACCACAGTGGGCACGCCGCAGCTGGGTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: GAAPPWAPAAPWWAG*STAPQWARRSWVRA
Trigger: GGCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACCTGCCCACCAAGGAGCGGCTGGTGCCCAGGGAGGTGCCGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp AGGTTGGAGTACTGCACCACAGTGGGCACGCCGCAGCTGGGTCCGTaGCAGCCGGGCAGGCACACGCACTCCACCCACTTGCGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: RLEYCTTVGTPQLGP*QPGRHTHSTHLRRA
Trigger: CGCCCGGCGCAAGTGGGTGGAGTGCGTGTGCCTGCCCGGCTGGCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp ACCTCCCTGGGCACCAGCCGCTCCTTGGTGGGCAGGTTGGAGTACTaGACCACAGTGGGCACGCCGCAGCTGGGTCCGTGCCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: TSLGTSRSLVGRLEY*TTVGTPQLGPCQPG
Trigger: GCCCGGCTGGCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACCTGCCCACCAAGGAGCGGCTGGTGCCCAGGGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp TTCCCTCGGGACCCCTGTGGCGCCACCCGCCCGCCGCCGTGCTCCTaGGCTCCTGGTAGGGGTTGTCCAGCAGGTAGTGGAACCGGTCGT +
Preference number: 5 (lower is better)
Translates to: FPRDPCGATRPPPCS*APGRGCPAGSGTGR
Trigger: ACGACCGGTTCCACTACCTGCTGGACAACCCCTACCAGGAGCCCAGGAGCACGGCGGCGGGCGGGTGGCGCCACAGGGGTCCCGAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 90 bp CCGGCCGTCCCGGGGGCGGCCTCTCCAGCATCTTGGTGCCGGGTTTaGAGCAGACGCCGCCGGCCTTGGTGCGCACGAAATACTCGGTGG +
Preference number: 5 (lower is better)
Translates to: PAVPGAASPASWCRV*SRRRRPWCARNTRW
Trigger: CCACCGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGATGCTGGAGAGGCCGCCCCCGGGACGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS GCA 90 bp ATGCCCTCGGGCGTGAAGCACCAGGAGCAGTGCCAGCCGGCGAAGTaGAGGGGGCTGCCCAGCGACCACTGCACCAGGATGTGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: MPSGVKHQEQCQPAK*RGLPSDHCTRMWPV
Trigger: CACCGGCCACATCCTGGTGCAGTGGTCGCTGGGCAGCCCCCTGCACTTCGCCGGCTGGCACTGCTCCTGGTGCTTCACGCCCGAGGGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp TTGGGCGCATACATGTGCTCGCTGGGGTCTGCAGGCGGGTACTCCTaGTGCGTGCCGTCGAACCAGCCCCCGGTGCGGATCAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LGAYMCSLGSAGGYS*CVPSNQPPVRIRPR
Trigger: CCGCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp TACTGGCGGCGGCGCAGGCGGATGCCGTCCAGCCCATACACTGCCTaGAGCATGTCCACCGTGCAGCCTGACACCACCTCCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: YWRRRRRMPSSPYTA*SMSTVQPDTTSRVP
Trigger: GGGCACCCTGGAGGTGGTGTCAGGCTGCACGGTGGACATGCTGCAGGCAGTGTATGGGCTGGACGGCATCCGCCTGCGCCGCCGCCAGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp ACGAAATACTCGGTGGTGTCCTCGGGCAGCACCAAGTCCACCCGGTaGAGCTCCTCGGCCGCCTTGCTGGGCGGCAGCGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TKYSVVSSGSTKSTR*SSSAALLGGSGCSR
Trigger: CCTGCTGCAGCCGCTGCCGCCCAGCAAGGCGGCCGAGGAGCTCCACCGGGTGGACTTGGTGCTGCCCGAGGACACCACCGAGTATTTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS CCA 90 bp TGGTGGGCAGGTTGGAGTACTGCACCACAGTGGGCACGCCGCAGCTaGGTCCGTGCCAGCCGGGCAGGCACACGCACTCCACCCACTTGC +
Preference number: 5 (lower is better)
Translates to: WWAGWSTAPQWARRS*VRASRAGTRTPPTC
Trigger: GCAAGTGGGTGGAGTGCGTGTGCCTGCCCGGCTGGCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACCTGCCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp CTGCAGGCGGGTACTCCTGCTGCGTGCCGTCGAACCAGCCCCCGGTaGGGATCAGGCCGCGGATGTAGTTCAGGTCCCGCTTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LQAGTPAACRRTSPR*GSGRGCSSGPACPR
Trigger: ACGAGGACAAGCGGGACCTGAACTACATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp CATACATGTGCTCGCTGGGGTCTGCAGGCGGGTACTCCTGCTGCGTaGCGTCGAACCAGCCCCCGGTGCGGATCAGGCCGCGGATGTAGT +
Preference number: 5 (lower is better)
Translates to: HTCARWGLQAGTPAA*RRTSPRCGSGRGCS
Trigger: ACTACATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp AACCCTATCAGATCATGCAGCTCTAGACTTCCGCCTCGTCCAGTTTaGCCCGGGCGGGCGGCCTTCCCTCGGGACCCCTGTGGCGCCACC +
Preference number: 5 (lower is better)
Translates to: NPIRSCSSRLPPRPV*PGRAAFPRDPCGAT
Trigger: GGTGGCGCCACAGGGGTCCCGAGGGAAGGCCGCCCGCCCGGGGCAAACTGGACGAGGCGGAAGTCTAGAGCTGCATGATCTGATAGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp ACGTCGCCCAGCTCGTGGAAGCGCACGTCCAGCAGGTCGAACTCGTaGTTGACGTTGATGGCGTTGATGACGCGGCGCGGCACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSPSSWKRTSSRSNS*LTLMALMTRRGTSL
Trigger: CAGGGAGGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTTCCACGAGCTGGGCGACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp GTTCTTCAGCAGGTACTTGGGCGCATACATGTGCTCGCTGGGGTCTaGAGGCGGGTACTCCTGCTGCGTGCCGTCGAACCAGCCCCCGGT +
Preference number: 5 (lower is better)
Translates to: VLQQVLGRIHVLAGV*RRVLLLRAVEPAPG
Trigger: ACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 90 bp TGCGCATGTGGAAGGCGAAGGGCTCGGTCCAGCCATCGTAGAGCTTaGGGAAAAGGACGCCGTCACGGGCCGGGATCTCGTCCGCATCGT +
Preference number: 5 (lower is better)
Translates to: CACGRRRARSSHRRA*GKGRRHGPGSRPHR
Trigger: ACGATGCGGACGAGATCCCGGCCCGTGACGGCGTCCTTTTCCTCAAGCTCTACGATGGCTGGACCGAGCCCTTCGCCTTCCACATGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 90 bp GCGACCACTGCACCAGGATGTGGCCGGTGCGGTTCTCATACTGTCTaGAGTTGGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGATGC +
Preference number: 5 (lower is better)
Translates to: ATTAPGCGRCGSHTV*SWAWCSTGGGAGGC
Trigger: GCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCAACTTCAGACAGTATGAGAACCGCACCGGCCACATCCTGGTGCAGTGGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp CCTCCAGGGTGCCCGGCTGCTTCCAGAAGAAGCCGTAGAGCGACTTaGGCATGTGGAAGGCGAAGGGCTCGGTCCAGCCATCGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: PPGCPAASRRSRRAT*ACGRRRARSSHRRA
Trigger: AGCTCTACGATGGCTGGACCGAGCCCTTCGCCTTCCACATGCGCAAGTCGCTCTACGGCTTCTTCTGGAAGCAGCCGGGCACCCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 90 bp CTGCCTGCAGCATGTCCACCGTGCAGCCTGACACCACCTCCAGGGTaGCCGGCTGCTTCCAGAAGAAGCCGTAGAGCGACTTGCGCATGT +
Preference number: 5 (lower is better)
Translates to: LPAACPPCSLTPPPG*PAASRRSRRATCAC
Trigger: ACATGCGCAAGTCGCTCTACGGCTTCTTCTGGAAGCAGCCGGGCACCCTGGAGGTGGTGTCAGGCTGCACGGTGGACATGCTGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCACGCACTCCACCCACTaGCGCCGGGCGCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: SIQLALLSLFGPKTASWPTHSTH*RRAPRP
Trigger: GGGCCGAGGCGCCCGGCGCAAGTGGGTGGAGTGCGT...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp GGTCGTAGTTCTTCAGCAGGTACTTGGGCGCATACATGTGCTCGCTaGGGTCTGCAGGCGGGTACTCCTGCTGCGTGCCGTCGAACCAGC +
Preference number: 5 (lower is better)
Translates to: GRSSSAGTWAHTCAR*GLQAGTPAACRRTS
Trigger: GCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGAACTACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCGGGCCGAGGAGCCGTaGGCCCCCTCAGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GFFISSLRGVHASSWTQMRAEEP*APSGFS
Trigger: GGAGAAGCCTGAGGGGGCCAACGGCTCCTCGGCCCG...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp TTGGACTCGCACACCACAAAGGCGTCCACCACGTCGCCCAGCTCGTaGAAGCGCACGTCCAGCAGGTCGAACTCGTGGTTGACGTTGATG +
Preference number: 5 (lower is better)
Translates to: LDSHTTKASTTSPSS*KRTSSRSNSWLTLM
Trigger: CATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTTCCACGAGCTGGGCGACGTGGTGGACGCCTTTGTGGTGTGCGAGTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGATCTTGGTGCCGGGTTaGAAGCAGACGCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PFILREWPWVLLPPPNSQILVPG*KQTPPA
Trigger: GGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGAT...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CATGCTGCCCCTGGGAACCGACGTGACCCATGGGTGGATAAGGCCAGCCATGCTTCCTTGGTGGGCAGGTaGGAGTACTGCACCACAGTG +
Preference number: 5 (lower is better)
Translates to: HAAPGNRRDPWVDKASHASLVGR*EYCTTV
Trigger: CACTGTGGTGCAGTACTCCAACCTGCCCACCAAGGA...AGCATGGCTGGCCTTATCCACCCATGGGTCACGTCGGTTCCCAGGGGCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGGGCACCAGCCGCTCCTaGGTGGGCAGGTTGGAGTAC +
Preference number: 5 (lower is better)
Translates to: GCALLSISASPRLGCTQEGTSRS*VGRLEY
Trigger: GTACTCCAACCTGCCCACCAAGGAGCGGCTGGTGCC...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACATCCGCCTCGTCCAGTTaGCCCCGGGCGGGCGGCCTT +
Preference number: 5 (lower is better)
Translates to: TYNWTLGLARTECTVHKTSASSS*PRAGGL
Trigger: AAGGCCGCCCGCCCGGGGCAAACTGGACGAGGCGGA...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GGGGTCTCAGGGCCAGTTATTCCCGGGGAGAAAGGTGGACATGGGACATGGCAGCTGGCCACAGCAGTCTaGGCAGTCATAAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GVSGPVIPGEKGGHGTWQLATAV*AVIRAT
Trigger: GGTGGCCCTTATGACTGCCAAGACTGCTGTGGCCAG...CTGCCATGTCCCATGTCCACCTTTCTCCCCGGGAATAACTGGCCCTGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp GCGGATGTAGTTCAGGTCCCGCTTGTCCTCGTAGTCACCCCAGCGTaGGAAGTCGCCATTCTGGGCGGACACGAGCTTGAAGTAGATGCC +
Preference number: 5 (lower is better)
Translates to: ADVVQVPLVLVVTPA*EVAILGGHELEVDA
Trigger: GGCATCTACTTCAAGCTCGTGTCCGCCCAGAATGGCGACTTCCCACGCTGGGGTGACTACGAGGACAAGCGGGACCTGAACTACATCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 90 bp TGTCCAGCAGGTAGTGGAACCGGTCGTAGTTCTTCAGCAGGTACTTaGGCGCATACATGTGCTCGCTGGGGTCTGCAGGCGGGTACTCCT +
Preference number: 5 (lower is better)
Translates to: CPAGSGTGRSSSAGT*AHTCARWGLQAGTP
Trigger: AGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGAACTACGACCGGTTCCACTACCTGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCCAGACGCCGCCGGCCTaGGTGCGCACGAAATACTCG +
Preference number: 5 (lower is better)
Translates to: SIQLALLSLFGPKTASWPQTPPA*VRTKYS
Trigger: CGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCTG...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CCCTTCATATTGAGGGAGTGGCCCTGGGTTCTTCTGCCCCCACCAAATTCCCAGGGCCTCTCCAGCATCTaGGTGCCGGGTTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PFILREWPWVLLPPPNSQGLSSI*VPGLKQ
Trigger: CTGCTTCAAACCCGGCACCAAGATGCTGGAGAGGCC...CTGGGAATTTGGTGGGGGCAGAAGAACCCAGGGCCACTCCCTCAATATGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCTCCAGGCCCCTGTGTaGGCTCACGACAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYLQAPV*AHDSLR
Trigger: CCTCAGGCTGTCGTGAGCCAACACAGGGGCCTGGAG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCTTGACGTTGATGGCGTaGATGACGCGGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: SIQLALLSLFGPKTASWPLTLMA*MTRRGT
Trigger: GGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAA...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACAGCCCACTTCACGCTaGCCCACCAGCGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDAQPTSR*PTSGSS
Trigger: AGAGGAGCCGCTGGTGGGCAAGCGTGAAGTGGGCTG...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACCATGGACAGGCCTCCTaGGGTCTAGGGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYHGQAS*GLGVSG
Trigger: CCCTGAGACCCCTAGACCCAAGGAGGCCTGTCCATG...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGCCCAGACTCTCCCTGTaGCCCCCAAAGATCTCCCAT +
Preference number: 5 (lower is better)
Translates to: HWALNPDSAVARRCPPLLPRLSL*PPKISH
Trigger: ATGGGAGATCTTTGGGGGCAACAGGGAGAGTCTGGG...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAAGCTCCTCGGCCGCCTaGCTGGGCGGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRSSSAA*LGGSGC
Trigger: GCAGCCGCTGCCGCCCAGCAAGGCGGCCGAGGAGCT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCCTACAACTGGACTCTaGGCCTTGCAAGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: PALGCTVRETGASCSGNSPTTGL*ALQGLS
Trigger: ACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGAGGGACCCCGAGTGTTaGAGCCACCTCTCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: NWTLGLARTECTVHKTAMRDPEC*SHLSAP
Trigger: TGGGGCTGAGAGGTGGCTCAAACACTCGGGGTCCCT...CATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp TCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACGGCGTGACCGGGGCATaGTTCCAGAAAAAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SSLPYEVSTLPPGPKCIYGVTGA*FQKKLD
Trigger: GTCCAGCTTTTTCTGGAACAATGCCCCGGTCACGCC...GTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCACACAGGAGCCTCAGCACCTCCTCTaGGTAGGATGTGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GCALLSISASPRLGCTQEPQHLL*VGCGFF
Trigger: GAAAAAGCCACATCCTACCAAGAGGAGGTGCTGAGG...CTCCTGTGTGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTCCTTATTGTCCCTTTTaGGGCCCAAGACAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: PALGCTVRETGASCSGNSPYCPF*GPRQPH
Trigger: ATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGG...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTCCCCCAGGCTTGGATGCAGCAGCCTGGCCTAGATaGACCCAGAGCCATAGGGAC +
Preference number: 5 (lower is better)
Translates to: QKVGVPSCLFLLPPGLDAAAWPR*TQSHRD
Trigger: GTCCCTATGGCTCTGGGTCAATCTAGGCCAGGCTGC...TGCATCCAAGCCTGGGGGAAGCAGAAATAGACAAGAGGGCACACCCACTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CACTGGGCACTTAACCCAGACAGTGCTGTCGCAAGAAGATGCCCTCCTCTCCTGTGGTTTCCCTTCATATaGAGGGAGTGGCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: HWALNPDSAVARRCPPLLWFPFI*REWPWV
Trigger: AACCCAGGGCCACTCCCTCAATATGAAGGGAAACCA...CAGGAGAGGAGGGCATCTTCTTGCGACAGCACTGTCTGGGTTAAGTGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp GGCTTTTTCATCTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGACTGGACTCTTGGCCTaGCAAGGACTGAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: GFFISSLRGVHASSWTQMTGLLA*QGLSAQ
Trigger: CTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGT...CATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAGATGAAAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CCAGCCCTGGGCTGCACAGTGAGGGAAACAGGAGCAAGCTGTTCCGGAAACTCTATACAACTGGCCTTATaGTCCCTTTTTGGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: PALGCTVRETGASCSGNSIQLAL*SLFGPK
Trigger: CTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTAT...AGAGTTTCCGGAACAGCTTGCTCCTGTTTCCCTCACTGTGCAGCCCAGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCTCTGCCTCAGTCATTTaGGGGAGCTGCAGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: SIQLALLSLFGPKTASWPSASVI*GSCRRC
Trigger: ACACCTCCTGCAGCTCCCCAAAATGACTGAGGCAGA...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACAGCAATGAACTCGTGGTTGACGTaGATGGCGTTGATGACGCGG +
Preference number: 5 (lower is better)
Translates to: NWTLGLARTECTVHKTAMNSWLT*MALMTR
Trigger: CCGCGTCATCAACGCCATCAACGTCAACCACGAGTT...CATTGCTGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp AGCATACAACTGGCCTTATTGTCCCTTTTTGGGCCCAAGACAGCCTCATGGCCCAGGTCGAACTCGTGGTaGACGTTGATGGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: SIQLALLSLFGPKTASWPRSNSW*TLMALM
Trigger: CATCAACGCCATCAACGTCAACCACGAGTTCGACCT...GGGCCATGAGGCTGTCTTGGGCCCAAAAAGGGACAATAAGGCCAGTTGTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAAGCATCTCCCGGAACTaGAGCGGCCGCGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRSISRN*SGRGSP
Trigger: TGGGGAGCCGCGGCCGCTCAAGTTCCGGGAGATGCT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACCTACAACTGGACTCTTGGCCTTGCAAGGACTGAGTGCACAGTCCACAAGACATACTCGAAGGTGCCATaGGTCAGCATCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: TYNWTLGLARTECTVHKTYSKVP*VSISRN
Trigger: GTTCCGGGAGATGCTGACCAATGGCACCTTCGAGTA...TGTCTTGTGGACTGTGCACTCAGTCCTTGCAAGGCCAAGAGTCCAGTTGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp CTCTTCCCTACGAGGTGTCCACGCTTCCTCCTGGACCCAAATGCATCTACTTACGCATCCCCTTTAGCTTaGCTTTCTAGGCTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: LFPTRCPRFLLDPNASTYASPLA*LSRLPK
Trigger: CTTGGGGAGCCTAGAAAGCAAAGCTAAAGGGGATGC...GTAAGTAGATGCATTTGGGTCCAGGAGGAAGCGTGGACACCTCGTAGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp TTCTGGCTCATGCCTTTAGCAAAAAGTGGGTGTGCCCTCTTGTCTATTTCTGCTTTCTTCAGCAGGTACTaGGGCGCATACATGTGCTCG +
Preference number: 5 (lower is better)
Translates to: FWLMPLAKSGCALLSISAFFSRY*GAYMCS
Trigger: CGAGCACATGTATGCGCCCAAGTACCTGCTGAAGAA...AGCAGAAATAGACAAGAGGGCACACCCACTTTTTGCTAAAGGCATGAGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAATGCTTCCCGGATGCTaGGCATGGACAGGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRMLPGC*AWTGLL
Trigger: AAGGAGGCCTGTCCATGCCAAGCATCCGGGAAGCAT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS-3UTR CAA 90 bp ACTGTATTTCAGGGTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGAAAACAAGCTTCCATCTaGCTTAAACCACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: TVFQGLLITAAQNQLQQRKQASI*LKPLYF
Trigger: GAAATACAGTGGTTTAAGCAAGATGGAAGCTTGTTT...TCTTTGTTGGAGTTGATTCTGAGCTGCTGTGATTAGGAGACCCTGAAATACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp GCTCGCTGGGGTCTGCAGGCGGGTACTCCTGCTGCGTaGCGTCGAACCAGCCCCCGGTGCGGATCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: ARWGLQAGTPAA*RRTSPRCGSGR
Trigger: GCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 72 bp AGCACCAAGTCCACCCGGTGGAGCTCCTCGGCCGCCTaGCTGGGCGGCAGCGGCTGCAGCAGGGGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: STKSTRWSSSAA*LGGSGCSRGEW
Trigger: CCACTCGCCCCTGCTGCAGCCGCTGCCGCCCAGCAAGGCGGCCGAGGAGCTCCACCGGGTGGACTTGGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS CAA 90 bp CGGCGCGGCACCTCCCTGGGCACCAGCCGCTCCTTGGTGGGCAGGTaGGAGTACTGCACCACAGTGGGCACGCCGCAGCTGGGTCCGTGC +
Preference number: 6 (lower is better)
Translates to: RRGTSLGTSRSLVGR*EYCTTVGTPQLGPC
Trigger: GCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACCTGCCCACCAAGGAGCGGCTGGTGCCCAGGGAGGTGCCGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp GACCCCTGTGGCGCCACCCGCCCGCCGCCGTGCTCCTaGGCTCCTGGTAGGGGTTGTCCAGCAGGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: DPCGATRPPPCS*APGRGCPAGSG
Trigger: TCCACTACCTGCTGGACAACCCCTACCAGGAGCCCAGGAGCACGGCGGCGGGCGGGTGGCGCCACAGGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 72 bp GCCGCAGGTTGCGCAGCCGCGAGACGCCGTCCTGGGTaGGGAAGGTGCGCAGGTAGTCGTCGGCGATCCAGC +
Preference number: 6 (lower is better)
Translates to: AAGCAAARRRPG*GRCAGSRRRSS
Trigger: GCTGGATCGCCGACGACTACCTGCGCACCTTCCTCACCCAGGACGGCGTCTCGCGGCTGCGCAACCTGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp ACCAGGAGCAGTGCCAGCCGGCGAAGTGCAGGGGGCTaGCCAGCGACCACTGCACCAGGATGTGGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: TRSSASRRSAGG*PATTAPGCGRC
Trigger: GCACCGGCCACATCCTGGTGCAGTGGTCGCTGGGCAGCCCCCTGCACTTCGCCGGCTGGCACTGCTCCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 90 bp TCCGGCCGTCCCGGGGGCGGCCTCTCCAGCATCTTGGTGCCGGGTTaGAAGCAGACGCCGCCGGCCTTGGTGCGCACGAAATACTCGGTG +
Preference number: 6 (lower is better)
Translates to: SGRPGGGLSSILVPG*KQTPPALVRTKYSV
Trigger: CACCGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGATGCTGGAGAGGCCGCCCCCGGGACGGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS GCA 72 bp GGCGTGAAGCACCAGGAGCAGTGCCAGCCGGCGAAGTaGAGGGGGCTGCCCAGCGACCACTGCACCAGGATG +
Preference number: 6 (lower is better)
Translates to: GVKHQEQCQPAK*RGLPSDHCTRM
Trigger: CATCCTGGTGCAGTGGTCGCTGGGCAGCCCCCTGCACTTCGCCGGCTGGCACTGCTCCTGGTGCTTCACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp GGTTGGAGTACTGCACCACAGTGGGCACGCCGCAGCTaGGTCCGTGCCAGCCGGGCAGGCACACGCACTCCA +
Preference number: 6 (lower is better)
Translates to: GWSTAPQWARRS*VRASRAGTRTP
Trigger: TGGAGTGCGTGTGCCTGCCCGGCTGGCACGGACCCAGCTGCGGCGTGCCCACTGTGGTGCAGTACTCCAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 72 bp CCCGGGGGCGGCCTCTCCAGCATCTTGGTGCCGGGTTaGAAGCAGACGCCGCCGGCCTTGGTGCGCACGAAA +
Preference number: 6 (lower is better)
Translates to: PGGGLSSILVPG*KQTPPALVRTK
Trigger: TTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGATGCTGGAGAGGCCGCCCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS TCA 72 bp CCGGGGGCGGCCTCTCCAGCATCTTGGTGCCGGGTTTaGAGCAGACGCCGCCGGCCTTGGTGCGCACGAAAT +
Preference number: 6 (lower is better)
Translates to: PGAASPASWCRV*SRRRRPWCARN
Trigger: ATTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGATGCTGGAGAGGCCGCCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS GCA 72 bp CGGCGCAGGCGGATGCCGTCCAGCCCATACACTGCCTaGAGCATGTCCACCGTGCAGCCTGACACCACCTCC +
Preference number: 6 (lower is better)
Translates to: RRRRMPSSPYTA*SMSTVQPDTTS
Trigger: GGAGGTGGTGTCAGGCTGCACGGTGGACATGCTGCAGGCAGTGTATGGGCTGGACGGCATCCGCCTGCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp GGTACTCCTGCTGCGTGCCGTCGAACCAGCCCCCGGTaGGGATCAGGCCGCGGATGTAGTTCAGGTCCCGCT +
Preference number: 6 (lower is better)
Translates to: GTPAACRRTSPR*GSGRGCSSGPA
Trigger: AGCGGGACCTGAACTACATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp TACATGTGCTCGCTGGGGTCTGCAGGCGGGTACTCCTaGTGCGTGCCGTCGAACCAGCCCCCGGTGCGGATC +
Preference number: 6 (lower is better)
Translates to: YMCSLGSAGGYS*CVPSNQPPVRI
Trigger: GATCCGCACCGGGGGCTGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 90 bp TCGCCCAGCTCGTGGAAGCGCACGTCCAGCAGGTCGAACTCGTGGTaGACGTTGATGGCGTTGATGACGCGGCGCGGCACCTCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SPSSWKRTSSRSNSW*TLMALMTRRGTSLG
Trigger: GCCCAGGGAGGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTTCCACGAGCTGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 90 bp AGCTCGTGGAAGCGCACGTCCAGCAGGTCGAACTCGTGGTTGACGTaGATGGCGTTGATGACGCGGCGCGGCACCTCCCTGGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: SSWKRTSSRSNSWLT*MALMTRRGTSLGTS
Trigger: GCTGGTGCCCAGGGAGGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTTCCACGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 90 bp ATCTCGTCCGCATCGTCAATGATGAAGACGTCGTCGGGCCGCAGGTaGCGCAGCCGCGAGACGCCGTCCTGGGTGAGGAAGGTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: ISSASSMMKTSSGRR*RSRETPSWVRKVRR
Trigger: CCTGCGCACCTTCCTCACCCAGGACGGCGTCTCGCGGCTGCGCAACCTGCGGCCCGACGACGTCTTCATCATTGACGATGCGGACGAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp TGGGCATGGTGTAGTACTGGCGGCGGCGCAGGCGGATaGCGTCCAGCCCATACACTGCCTGCAGCATGTCCA +
Preference number: 6 (lower is better)
Translates to: WAWCSTGGGAGG*RPAHTLPAACP
Trigger: TGGACATGCTGCAGGCAGTGTATGGGCTGGACGGCATCCGCCTGCGCCGCCGCCAGTACTACACCATGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 72 bp GCATCGTCAATGATGAAGACGTCGTCGGGCCGCAGGTaGCGCAGCCGCGAGACGCCGTCCTGGGTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: ASSMMKTSSGRR*RSRETPSWVRK
Trigger: CTTCCTCACCCAGGACGGCGTCTCGCGGCTGCGCAACCTGCGGCCCGACGACGTCTTCATCATTGACGATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 72 bp GGAAGGCGAAGGGCTCGGTCCAGCCATCGTAGAGCTTaGGGAAAAGGACGCCGTCACGGGCCGGGATCTCGT +
Preference number: 6 (lower is better)
Translates to: GRRRARSSHRRA*GKGRRHGPGSR
Trigger: ACGAGATCCCGGCCCGTGACGGCGTCCTTTTCCTCAAGCTCTACGATGGCTGGACCGAGCCCTTCGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp GCATGTCCACCGTGCAGCCTGACACCACCTCCAGGGTaGCCGGCTGCTTCCAGAAGAAGCCGTAGAGCGACT +
Preference number: 6 (lower is better)
Translates to: ACPPCSLTPPPG*PAASRRSRRAT
Trigger: AGTCGCTCTACGGCTTCTTCTGGAAGCAGCCGGGCACCCTGGAGGTGGTGTCAGGCTGCACGGTGGACATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS GCA 72 bp CAGGTACTTGGGCGCATACATGTGCTCGCTGGGGTCTaGAGGCGGGTACTCCTGCTGCGTGCCGTCGAACCA +
Preference number: 6 (lower is better)
Translates to: QVLGRIHVLAGV*RRVLLLRAVEP
Trigger: TGGTTCGACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp TGCAGGGGGCTGCCCAGCGACCACTGCACCAGGATGTaGCCGGTGCGGTTCTCATACTGTCTGAAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: CRGLPSDHCTRM*PVRFSYCLKLG
Trigger: GCCCAACTTCAGACAGTATGAGAACCGCACCGGCCACATCCTGGTGCAGTGGTCGCTGGGCAGCCCCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 72 bp ATCTTGGTGCCGGGTTTGAAGCAGACGCCGCCGGCCTaGGTGCGCACGAAATACTCGGTGGTGTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: ILVPGLKQTPPA*VRTKYSVVSSG
Trigger: GCCCGAGGACACCACCGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS CAA 72 bp AAGCGCACGTCCAGCAGGTCGAACTCGTGGTTGACGTaGATGGCGTTGATGACGCGGCGCGGCACCTCCCTG +
Preference number: 6 (lower is better)
Translates to: KRTSSRSNSWLT*MALMTRRGTSL
Trigger: CAGGGAGGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 72 bp TCGTGGAAGCGCACGTCCAGCAGGTCGAACTCGTGGTaGACGTTGATGGCGTTGATGACGCGGCGCGGCACC +
Preference number: 6 (lower is better)
Translates to: SWKRTSSRSNSW*TLMALMTRRGT
Trigger: GGTGCCGCGCCGCGTCATCAACGCCATCAACGTCAACCACGAGTTCGACCTGCTGGACGTGCGCTTCCACGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CAA 90 bp CTCTCCAGCATCTTGGTGCCGGGTTTGAAGCAGACGCCGCCGGCCTaGGTGCGCACGAAATACTCGGTGGTGTCCTCGGGCAGCACCAAG +
Preference number: 6 (lower is better)
Translates to: LSSILVPGLKQTPPA*VRTKYSVVSSGSTK
Trigger: CTTGGTGCTGCCCGAGGACACCACCGAGTATTTCGTGCGCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAGATGCTGGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341184.7
ENST00000429402.1
CDS GCA 72 bp TGCCCGGCTGCTTCCAGAAGAAGCCGTAGAGCGACTTaGGCATGTGGAAGGCGAAGGGCTCGGTCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: CPAASRRSRRAT*ACGRRRARSSH
Trigger: ATGGCTGGACCGAGCCCTTCGCCTTCCACATGCGCAAGTCGCTCTACGGCTTCTTCTGGAAGCAGCCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp TCTTCAGCAGGTACTTGGGCGCATACATGTGCTCGCTaGGGTCTGCAGGCGGGTACTCCTGCTGCGTGCCGT +
Preference number: 6 (lower is better)
Translates to: SSAGTWAHTCAR*GLQAGTPAACR
Trigger: ACGGCACGCAGCAGGAGTACCCGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 72 bp GCACCAGGATGTGGCCGGTGCGGTTCTCATACTGTCTaGAGTTGGGCATGGTGTAGTACTGGCGGCGGCGCA +
Preference number: 6 (lower is better)
Translates to: APGCGRCGSHTV*SWAWCSTGGGA
Trigger: TGCGCCGCCGCCAGTACTACACCATGCCCAACTTCAGACAGTATGAGAACCGCACCGGCCACATCCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp GTTCAGGTCCCGCTTGTCCTCGTAGTCACCCCAGCGTaGGAAGTCGCCATTCTGGGCGGACACGAGCTTGAA +
Preference number: 6 (lower is better)
Translates to: VQVPLVLVVTPA*EVAILGGHELE
Trigger: TTCAAGCTCGTGTCCGCCCAGAATGGCGACTTCCCACGCTGGGGTGACTACGAGGACAAGCGGGACCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS CCA 72 bp GGTAGTGGAACCGGTCGTAGTTCTTCAGCAGGTACTTaGGCGCATACATGTGCTCGCTGGGGTCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GSGTGRSSSAGT*AHTCARWGLQA
Trigger: CGCCTGCAGACCCCAGCGAGCACATGTATGCGCCCAAGTACCTGCTGAAGAACTACGACCGGTTCCACTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341184.7
CDS TCA 72 bp TCACCCTCTGTTTTGCAGTCCTGTGGGAGACCTGGCTaGGCCACGGTGTCAAAGCATTCTGCATGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SPSVLQSCGRPG*ATVSKHSAWSL
Trigger: CAGGCTCCATGCAGAATGCTTTGACACCGTGGCTCAGCCAGGTCTCCCACAGGACTGCAAAACAGAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418314.1
CDS CCA 72 bp GATGTCACCCTCTGTTTTGCAGTCCTGTGGGAGACCTaGCTGAGCCACGGTGTCAAAGCATTCTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: DVTLCFAVLWET*LSHGVKAFCME
Trigger: CTCCATGCAGAATGCTTTGACACCGTGGCTCAGCCAGGTCTCCCACAGGACTGCAAAACAGAGGGTGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418314.1
CDS GCA 72 bp TGGGAGACCTGGCTGAGCCACGGTGTCAAAGCATTCTaGATGGAGCCTGGCCATTGGCAGAGGTTCTATAAA +
Preference number: 6 (lower is better)
Translates to: WETWLSHGVKAF*MEPGHWQRFYK
Trigger: TTTATAGAACCTCTGCCAATGGCCAGGCTCCATGCAGAATGCTTTGACACCGTGGCTCAGCCAGGTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418314.1
CDS CCA 72 bp TTCATCCTTGAGGCACAGTGTCTAGTCCCCTCTGCCTaGCTTTCAAGGCTCTATGGCAGCAGTTTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: FILEAQCLVPSA*LSRLYGSSFLP
Trigger: AGGGAGGAAACTGCTGCCATAGAGCCTTGAAAGCCAGGCAGAGGGGACTAGACACTGTGCCTCAAGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429402.1
CDS GCA 72 bp TTCTCCGATCTAAAAGAAAGATGTCACCCTCTGTTTTaGAGTCCTGTGGGAGACCTGGCTGAGCCACGGTGT +
Preference number: 6 (lower is better)
Translates to: FSDLKERCHPLF*SPVGDLAEPRC
Trigger: ACACCGTGGCTCAGCCAGGTCTCCCACAGGACTGCAAAACAGAGGGTGACATCTTTCTTTTAGATCGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418314.1