Pregenerated sensors for MGARP (Homo sapiens)
Ensembl gene IDs: ENSG00000137463Ensembl transcript IDs: ENST00000398955.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTATGGCATTTGTTGCTaGAATGTCTACCGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SKKCTISSLSVLKSISGCYGICC*NVYRLE Trigger: CTCCAGCCGGTAGACATTTCAGCAACAAATGCCATA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTTATCAGACACCCTATaGCATTTGTTGCTGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: SKKCTISSLSVLKSISGCLSDTL*HLLLKC Trigger: ACATTTCAGCAACAAATGCCATAGGGTGTCTGATAA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCACCCTATGGCATTTGTaGCTGAAATGTCTACCGGCT | + |
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Preference number: 3 (lower is better) Translates to: SKKCTISSLSVLKSISGCTLWHL*LKCLPA Trigger: AGCCGGTAGACATTTCAGCAACAAATGCCATAGGGT...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGACACCCTATGGCATTaGTTGCTGAAATGTCTACCG | + |
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Preference number: 3 (lower is better) Translates to: SKKCTISSLSVLKSISGCDTLWH*LLKCLP Trigger: CGGTAGACATTTCAGCAACAAATGCCATAGGGTGTC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGCCCGGTTTCAGCACTaGCTGCTGTGGTCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCARFQH*LLWSPE Trigger: CTCCGGAGACCACAGCAGTCAGTGCTGAAACCGGGC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTCGCCGCTGCATCTGTaGCCTCTGGCCCGGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCSPLHL*PLARFQ Trigger: CTGAAACCGGGCCAGAGGTCACAGATGCAGCGGCGA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR GCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTCTTGGAGACCGCCCTaGGGAGATACATCGCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCSWRPP*GDTSRP Trigger: CGGGCGCGATGTATCTCCGCAGGGCGGTCTCCAAGA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR GCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGGTTTCCCTCGCCGCTaGATCTGTGACCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCGFPRR*ICDLWP Trigger: GGGCCAGAGGTCACAGATGCAGCGGCGAGGGAAACC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR CCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGCAGCGCCAGAGTCTTaGAGACCGCCCTGCGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCAAPES*RPPCGD Trigger: ATCTCCGCAGGGCGGTCTCCAAGACTCTGGCGCTGC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR GCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGGTTTCAGCACTGACTaGTGTGGTCTCCGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCGFSTD*CGLRSS Trigger: GCTGCTCCGGAGACCACAGCAGTCAGTGCTGAAACC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR CCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCCAGGGTTTACTTCCGTaGTTTCCCTCGCCGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCQGLLP*FPSPLH Trigger: ATGCAGCGGCGAGGGAAACCACGGAAGTAAACCCTG...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCAGGGAATCTGTTAGATaGCATCCGGCGCAGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCRESVR*HPAQRC Trigger: GCATCTCTGCGCCGGATGTCATCTAACAGATTCCCT...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTCCAGCAGAGGACTCTaGCTCAGCTGGAGAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCSSRGL*LSWRIF Trigger: GAAAATTCTCCAGCTGAGTCAGAGTCCTCTGCTGGA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR CCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGAAATGTCTACCGGCTaGAGATTAGCCTTGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCEMSTG*RLALSR Trigger: TCGGCTCAAGGCTAATCTCCAGCCGGTAGACATTTC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGTGTTTGGCTTGGTCTaGTGTGACTGTCTTGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCVFGLV*CDCLVS Trigger: GCTTACAAGACAGTCACATCAGACCAAGCCAAACAC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTATCATTATCGATGGTaGCAGCTTCATCCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCYHYRW*QLHPGQ Trigger: CTGCCCTGGATGAAGCTGTCACCATCGATAATGATA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTGGCTTGGTCTGATGTaGCTGTCTTGTAAGCATAAT | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCWLGLM*LSCKHN Trigger: ATTATGCTTACAAGACAGTCACATCAGACCAAGCCA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTTCTCCTTTTCACCTTaGAATGGATGTATCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCFSFSP*NGCISA Trigger: AGCAGAGATACATCCATTTCAAGGTGAAAAGGAGAA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCTGCAATGTCATATTCTaGTCTCAGACAGTAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCCNVIF*SQTVEE Trigger: CTCTTCTACTGTCTGAGATCAGAATATGACATTGCA...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR GCA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCAAATCTATCAGTGGATaGCAAAAATCTTCAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SKKCTISSLSVLKSISGCKSISG*QKSSRP Trigger: GGGTCTTGAAGATTTTTGGCATCCACTGATAGATTT...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 90 bp | CCTCGCCGCTGCATCTGTGACCTCTGGCCCGGTTTCAGCACTGACTaGTGTGGTCTCCGGAGCAGCCTCCACGTGACCTGGACAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PRRCICDLWPGFSTD*CGLRSSLHVTWTGR Trigger: TCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTCAGTGCTGAAACCGGGCCAGAGGTCACAGATGCAGCGGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 90 bp | AGGGTTTACTTCCGTGGTTTCCCTCGCCGCTGCATCTGTGACCTCTaGCCCGGTTTCAGCACTGACTGCTGTGGTCTCCGGAGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RVYFRGFPRRCICDL*PGFSTDCCGLRSSL Trigger: GAGGCTGCTCCGGAGACCACAGCAGTCAGTGCTGAAACCGGGCCAGAGGTCACAGATGCAGCGGCGAGGGAAACCACGGAAGTAAACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 90 bp | CTCTGGGGTTGTTTCAGGGTTTACTTCCGTGGTTTCCCTCGCCGCTaGATCTGTGACCTCTGGCCCGGTTTCAGCACTGACTGCTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LWGCFRVYFRGFPRR*ICDLWPGFSTDCCG Trigger: ACCACAGCAGTCAGTGCTGAAACCGGGCCAGAGGTCACAGATGCAGCGGCGAGGGAAACCACGGAAGTAAACCCTGAAACAACCCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS TCA 90 bp | CCGGTTTCAGCACTGACTGCTGTGGTCTCCGGAGCAGCCTCCACGTaGCCTGGACAGGCAGATGCCTCTTTTATGACCACAACTGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: PVSALTAVVSGAAST*PGQADASFMTTTVA Trigger: TGCTACAGTTGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTCAGTGCTGAAACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 90 bp | TTCAGCACTGACTGCTGTGGTCTCCGGAGCAGCCTCCACGTGACCTaGACAGGCAGATGCCTCTTTTATGACCACAACTGTAGCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: FSTDCCGLRSSLHVT*TGRCLFYDHNCSTG Trigger: CCCAGTGCTACAGTTGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTCAGTGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 90 bp | TGCTGTGGTCTCCGGAGCAGCCTCCACGTGACCTGGACAGGCAGATaGCTCTTTTATGACCACAACTGTAGCACTGGGACTTTCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: CCGLRSSLHVTWTGR*LFYDHNCSTGTFFS Trigger: GCTGAAGAAAGTCCCAGTGCTACAGTTGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 90 bp | CGGCTGGAGATTAGCCTTGAGCCGAAGCAGCCTCAGAGCCAACACTaGCTTCCTCCTGTAAATCATCTCCAGCAGAGGACTCTGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: RLEISLEPKQPQSQH*LPPVNHLQQRTLTQ Trigger: CTGAGTCAGAGTCCTCTGCTGGAGATGATTTACAGGAGGAAGCCAGTGTTGGCTCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 90 bp | ATTATCGATGGTGACAGCTTCATCCAGGGCAGCATTTGTAACCTCTaGGGTTGTTTCAGGGTTTACTTCCGTGGTTTCCCTCGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: IIDGDSFIQGSICNL*GCFRVYFRGFPRRC Trigger: GCAGCGGCGAGGGAAACCACGGAAGTAAACCCTGAAACAACCCCAGAGGTTACAAATGCTGCCCTGGATGAAGCTGTCACCATCGATAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 90 bp | CTTATCAGACACCCTATGGCATTTGTTGCTGAAATGTCTACCGGCTaGAGATTAGCCTTGAGCCGAAGCAGCCTCAGAGCCAACACTGGC | + |
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Preference number: 5 (lower is better) Translates to: LIRHPMAFVAEMSTG*RLALSRSSLRANTG Trigger: GCCAGTGTTGGCTCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCCGGTAGACATTTCAGCAACAAATGCCATAGGGTGTCTGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS-3UTR CAA 90 bp | AGTAAGAAATGTACAATCTCAAGTCTCTCAGTCCTAAAATCTATCAGTGGATGCGGCTGGAGATTAGCCTaGAGCCGAAGCAGCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SKKCTISSLSVLKSISGCGWRLA*SRSSLR Trigger: TCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCC...GCATCCACTGATAGATTTTAGGACTGAGAGACTTGAGATTGTACATTTCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 72 bp | CCCTCAGCGGCAGCGCCAGAGTCTTGGAGACCGCCCTaGGGAGATACATCGCGCCCGCTGTCCGCCGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSAAAPESWRPP*GDTSRPLSAAQ Trigger: CTGCGCGGCGGACAGCGGGCGCGATGTATCTCCGCAGGGCGGTCTCCAAGACTCTGGCGCTGCCGCTGAGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 72 bp | TGCATCTGTGACCTCTGGCCCGGTTTCAGCACTGACTaGTGTGGTCTCCGGAGCAGCCTCCACGTGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: CICDLWPGFSTD*CGLRSSLHVTW Trigger: CCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTCAGTGCTGAAACCGGGCCAGAGGTCACAGATGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS TCA 72 bp | GCACTGACTGCTGTGGTCTCCGGAGCAGCCTCCACGTaGCCTGGACAGGCAGATGCCTCTTTTATGACCACA | + |
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Preference number: 6 (lower is better) Translates to: ALTAVVSGAAST*PGQADASFMTT Trigger: TGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 72 bp | CTCCGGAGCAGCCTCCACGTGACCTGGACAGGCAGATaGCTCTTTTATGACCACAACTGTAGCACTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: LRSSLHVTWTGR*LFYDHNCSTGT Trigger: AGTCCCAGTGCTACAGTTGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS GCA 72 bp | TGTTTCAGGGTTTACTTCCGTGGTTTCCCTCGCCGCTaGATCTGTGACCTCTGGCCCGGTTTCAGCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: CFRVYFRGFPRR*ICDLWPGFSTD Trigger: GTCAGTGCTGAAACCGGGCCAGAGGTCACAGATGCAGCGGCGAGGGAAACCACGGAAGTAAACCCTGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 72 bp | GACTGCTGTGGTCTCCGGAGCAGCCTCCACGTGACCTaGACAGGCAGATGCCTCTTTTATGACCACAACTGT | + |
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Preference number: 6 (lower is better) Translates to: DCCGLRSSLHVT*TGRCLFYDHNC Trigger: ACAGTTGTGGTCATAAAAGAGGCATCTGCCTGTCCAGGTCACGTGGAGGCTGCTCCGGAGACCACAGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 72 bp | CACCCTATGGCATTTGTTGCTGAAATGTCTACCGGCTaGAGATTAGCCTTGAGCCGAAGCAGCCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: HPMAFVAEMSTG*RLALSRSSLRA Trigger: GGCTCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCCGGTAGACATTTCAGCAACAAATGCCATAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CAA 72 bp | TTTGTTGCTGAAATGTCTACCGGCTGGAGATTAGCCTaGAGCCGAAGCAGCCTCAGAGCCAACACTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FVAEMSTGWRLA*SRSSLRANTGF Trigger: GAAGCCAGTGTTGGCTCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCCGGTAGACATTTCAGCAACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS CCA 72 bp | GGTGACAGCTTCATCCAGGGCAGCATTTGTAACCTCTaGGGTTGTTTCAGGGTTTACTTCCGTGGTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: GDSFIQGSICNL*GCFRVYFRGFP Trigger: AGGGAAACCACGGAAGTAAACCCTGAAACAACCCCAGAGGTTACAAATGCTGCCCTGGATGAAGCTGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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| CDS TCA 72 bp | AAAAGCACTTATCAGACACCCTATGGCATTTGTTGCTaGAATGTCTACCGGCTGGAGATTAGCCTTGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: KSTYQTPYGICC*NVYRLEISLEP Trigger: CGGCTCAAGGCTAATCTCCAGCCGGTAGACATTTCAGCAACAAATGCCATAGGGTGTCTGATAAGTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398955.2 |
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