RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MGAM (Homo sapiens)

Ensembl gene IDs: ENSG00000257335, ENSG00000282607

Ensembl transcript IDs: ENST00000465654.5, ENST00000475668.6, ENST00000495045.1, ENST00000497554.1, ENST00000497673.5, ENST00000549489.6, ENST00000620571.1, ENST00000631981.1, ENST00000632195.1

Found 464 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCCATTCTATGATTACAAACGTGGACATACACACACTTCATCATaGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACAGTCAC +
Preference number: 1 (lower is better)
Translates to: GPFYDYKRGHTHTSS*TQFIFSKCHMMNSH
Trigger: GTGACTGTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATCATAGAATGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR CCA 90 bp TGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATaGGGTCCATTCTATGATTACAAACGTGGACATACACACACTTCA +
Preference number: 1 (lower is better)
Translates to: WNCHRKLSLVYLTKE*GPFYDYKRGHTHTS
Trigger: TGAAGTGTGTGTATGTCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACACACACACTTCATCATaGACCCAGTTCATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYTHTSS*TQFIFS
Trigger: ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACACACACTTCATCATaGACCCAGTTCATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTHTSS*TQFIFS
Trigger: ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR CCA 72 bp TATGATTACAAACGTGGACATACACACACTTCATCATaGACCCAGTTCATCTTCAGTAAATGTCATATGATG +
Preference number: 3 (lower is better)
Translates to: YDYKRGHTHTSS*TQFIFSKCHMM
Trigger: CATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
3UTR CCA 72 bp CACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATaGGGTCCATTCTATGATTACAAACGTGGACATACA +
Preference number: 3 (lower is better)
Translates to: HRKLSLVYLTKE*GPFYDYKRGHT
Trigger: TGTATGTCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGTGTCCCCTCGGCTGTaGGCACGGAAGAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSVSPRL*ARKKRV
Trigger: CACCCTCTTCTTCCGTGCTCACAGCCGAGGGGACAC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATGGCAGCTTCTGCTGTaGCGACCGCCATGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLWQLLL*RPPWSS
Trigger: GCTACTCCATGGCGGTCGCCACAGCAGAAGCTGCCA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTGGCAGCTTCTGCTGTaGCGACCGCCATGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMWQLLL*RPPWSS
Trigger: GCTACTCCATGGCGGTCGCCACAGCAGAAGCTGCCA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGTGTCCCCTCGGCTGTaGGCACGGAAGAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYVSPRL*ARKKRV
Trigger: CACCCTCTTCTTCCGTGCTCACAGCCGAGGGGACAC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGACATGTGGCCTTTGTTaGCGGCTGGTCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMTCGLC*RLVRDA
Trigger: TGCATCCCTGACCAGCCGCCAACAAAGGCCACATGT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCACGTTGGTCACATGTaGCCTTTGTTGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMHVGHM*PLLAAG
Trigger: ACCAGCCGCCAACAAAGGCCACATGTGACCAACGTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGCGGTAAGTGATGGCTaGCGCAGGCTGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSAVSDG*RRLKDN
Trigger: GTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAGCAGCATTTCCACTaGAGGACTGCACGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQQHFH*RTARVR
Trigger: ACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCATGTCACCTGGTCTaGCACAAACTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPCHLV*HKLMEQ
Trigger: CTGCTCCATGAGTTTGTGTCAGACCAGGTGACATGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATCTCTCATTACCTCTTaGAGCCGCTCCCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSLITS*SRSLSV
Trigger: GACAGAGAGGGAGCGGCTGCAAGAGGTAATGAGAGA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTTTCCACTGAAGGACTaGACGTGTTCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMFPLKD*TCSWGT
Trigger: AGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGCCCCAGTGCTGCACTaGATCCATACAGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMAPVLH*IHTESL
Trigger: AAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTGCTTGCCCCAGTGCTaGACTGCATCCATACAGAGA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMCLPQC*TASIQR
Trigger: TCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTGTCCTGTCACCTCCTaGACGGCTTCGTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSCPVTS*TASYVG
Trigger: ACCCACATACGAAGCCGTGCAGGAGGTGACAGGACA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGCGGTAAGTGATGGCTaGCGCAGGCTGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSAVSDG*RRLKDN
Trigger: GTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAAGCACGCCAGGGATaGACCATCTCAGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQARQG*TISGHP
Trigger: GGGATGACCTGAGATGGTCCATCCCTGGCGTGCTTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCAAGCACGCCAGGGATaGACCATCTCAGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYQARQG*TISGHP
Trigger: GGGATGACCTGAGATGGTCCATCCCTGGCGTGCTTG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTACCTTCATCCAGAACTaGAGTGATGAGGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSTFIQN*SDEEAG
Trigger: CCCGGCCTCCTCATCACTCCAGTTCTGGATGAAGGT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGATTCTTCTTGTACCCTaGGGGCTGGTCTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMILLVP*GLVSGE
Trigger: TTCTCCCGAGACCAGCCCCCAGGGTACAAGAAGAAT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCTGGACTCCAAATGTaGCATGTAGGGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPGLQM*HVGRVV
Trigger: AACCACCCTCCCTACATGCCACATTTGGAGTCCAGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCTGGACTCCAAATGTaGCATGTAGGGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPGLQM*HVGRVV
Trigger: AACCACCCTCCCTACATGCCACATTTGGAGTCCAGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAGGGTCTTGTCTCCTaGTCCCAATGGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQGLVS*SQWCCG
Trigger: ACCACAACACCATTGGGACCAGGAGACAAGACCCTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGCCAGACCTCCCCAATaGGTGGAGTCACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNARPPQ*VESLHL
Trigger: CAGATGGAGTGACTCCACTCATTGGGGAGGTCTGGC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGTGTCCCCTCGGCTGTaGGCACGGAAGAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGVSPRL*ARKKRV
Trigger: CACCCTCTTCTTCCGTGCTCACAGCCGAGGGGACAC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCATGTCACCTGGTCTaGCACAAACTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPCHLV*HKLMEQ
Trigger: CTGCTCCATGAGTTTGTGTCAGACCAGGTGACATGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTTTCCACTGAAGGACTaGACGTGTTCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSFPLKD*TCSWGT
Trigger: AGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAAGTCGAGTGGAGAGCTaGAAGAACTGGTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSRVES*KNWSAN
Trigger: GTTTGCTGACCAGTTCTTGCAGCTCTCCACTCGACT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCATAGAAGTCGAGAATaGCCCCAATGGTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMHRSRE*PQWCGK
Trigger: CTTACCGCACCATTGGGGGCATTCTCGACTTCTATG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAATCATAAGGGAGCTGTaGTGCGCGATTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLIIREL*CAISLH
Trigger: GTGGAGAGAAATCGCGCAGCACAGCTCCCTTATGAT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGAATGTCATACTGCTTaGCCCAGTGCTGCACTGCAT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLECHTA*PSAALH
Trigger: ATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGTGCACATCCCAAGTaGTGTTGTCCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGAHPK*CCPRRT
Trigger: AGTTCTACGAGGACAACAGCACTTGGGATGTGCACC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTGTCCCGTCACCTCCTaGACGGCTTCGTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNCPVTS*TASYVG
Trigger: ACCCACATACGAAGCCGTGCAGGAGGTGACGGGACA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGTGCACATCCCAAGTaGTGTTGTCCTCGTAGAACC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGAHPK*CCPRRT
Trigger: GGTTCTACGAGGACAACAGCACTTGGGATGTGCACC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACATGTGGCCTTTGTTaGCGGCTGGTCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTCGLC*RLVRDA
Trigger: TGCATCCCTGACCAGCCGCCAACAAAGGCCACATGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAGCAACAGCCACGTTaGTCACATGTGGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQQQPR*SHVAFV
Trigger: AACAAAGGCCACATGTGACCAACGTGGCTGTTGCTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGACTGCACGTGTTCGTaGGGCACTTCAAACCTGTTA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMDCTCS*GTSNLL
Trigger: TAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGAGAGCTGCAAGAACTaGTCAGCAAACAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSESCKN*SANSRG
Trigger: GCCCCTACTGTTTGCTGACCAGTTCTTGCAGCTCTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTGTGGCGACCGCCATaGAGTAGCCATACAGATTGT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLWRPP*SSHTDC
Trigger: ACAATCTGTATGGCTACTCCATGGCGGTCGCCACAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTATTTGGCTGCTGTGTaGGGAAGATGTAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMYLAAV*GRCSLL
Trigger: GAGGAGGCTACATCTTCCCCACACAGCAGCCAAATA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATTCGACTGGCCAGAGTaGTTGTATTTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLFDWPE*LYLAAV
Trigger: CACAGCAGCCAAATACAACCACTCTGGCCAGTCGAA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGACTCCAGAAGAATTaGATGCCTCCCAGATACAGC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGLQKN*MPPRYS
Trigger: GCTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGGACTCCAGAAGAATTaGATGCCTCCCAGATACAGC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLGLQKN*MPPRYS
Trigger: GCTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTATTCTTCTTGTACCCTaGGGGCTGGTCTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSILLVP*GLVSGE
Trigger: TTCTCCCGAGACCAGCCCCCAGGGTACAAGAAGAAT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGAACGTCACATCCATaGCATTGCTGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGTSHP*HCCSAG
Trigger: TCCTGCTGAACAGCAATGCCATGGATGTGACGTTCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGGAACGTCACATCCATaGCATTGCTGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLGTSHP*HCCSAG
Trigger: TCCTGCTGAACAGCAATGCCATGGATGTGACGTTCC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCTGGACTCCAAATGTaGCATGTAGGGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPGLQM*HVGRVV
Trigger: AACCACCCTCCCTACATGCCACATTTGGAGTCCAGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAGGGTCTTGTCTCCTaGTCCCAATGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQGLVS*SQWYCG
Trigger: ACCACAATACCATTGGGACCAGGAGACAAGACCCTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000620571.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCAGGGTCTTGTCTCCTaGTCCCAATGGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSQGLVS*SQWCCG
Trigger: ACCACAACACCATTGGGACCAGGAGACAAGACCCTG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGCATCGTATTCTGGCTaGCAGAAAAGCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLASYSG*QKSWPS
Trigger: ACTTGGCCAGCTTTTCTGCCAGCCAGAATACGATGC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCTTTGCATCGTATTCTaGCTGGCAGAAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLCIVF*LAEKLA
Trigger: GGCCAGCTTTTCTGCCAGCCAGAATACGATGCAAAG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACTTTGCATCGTATTCTaGCTGGCAGAAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLLCIVF*LAEKLA
Trigger: GGCCAGCTTTTCTGCCAGCCAGAATACGATGCAAAG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAGCAGCATTTCCACTaGAGGACTGCACGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQQHFH*RTARVR
Trigger: ACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATGGCTGGCGCAGGCTaGAGGACAACCTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGMAGAG*RTTSMA
Trigger: TGCCATGGAGGTTGTCCTTCAGCCTGCGCCAGCCAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACAATGGTGCGGTAAGTaGTGGCTGGCGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRQWCGK*WLAQAE
Trigger: TTCAGCCTGCGCCAGCCATCACTTACCGCACCATTG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCATATCTTCATATCTaGACCCCTGTCATATGGGCC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPYLHI*TPVIWA
Trigger: GGCCCATATGACAGGGGTTCAGATATGAAGATATGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGCCAGACCTCCCCAATaGGTGGAGTCACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRARPPQ*VESLHL
Trigger: CAGATGGAGTGACTCCACTCATTGGGGAGGTCTGGC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCAGGATTCTGGGAGTaGATGGGGGATTATTTAGGT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPGFWE*MGDYLG
Trigger: ACCTAAATAATCCCCCATTCACTCCCAGAATCCTGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCCATGTCACCTGGTCTaGCACAAACTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSPCHLV*HKLMEQ
Trigger: CTGCTCCATGAGTTTGTGTCAGACCAGGTGACATGG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGTGAAGCCAAGGAGCTaGGAGTCCCAAATTATAGTG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLVKPRS*ESQIIV
Trigger: CACTATAATTTGGGACTCTCAGCTCCTTGGCTTCAC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTTTCCACTGAAGGACTaGACGTGTTCGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSFPLKD*TCSWGT
Trigger: AGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCATAGAAGTCGAGAATaGCCCCAATGGTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSHRSRE*PQWCGK
Trigger: CTTACCGCACCATTGGGGGCATTCTCGACTTCTATG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCATACAGAGAGTCTTaGAGAACAGGTACCCATCCA +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPYRES*RTGTHP
Trigger: TGGATGGGTACCTGTTCTGCAAGACTCTCTGTATGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGCCCCAGTGCTGCACTaGATCCATACAGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYAPVLH*IHTESL
Trigger: AAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTGCTTGCCCCAGTGCTaGACTGCATCCATACAGAGA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSCLPQC*TASIQR
Trigger: TCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGTGCACATCCCAAGTaGTGTTGTCCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGAHPK*CCPRRT
Trigger: AGTTCTACGAGGACAACAGCACTTGGGATGTGCACC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATGTCCCGTCACCTCCTaGACGGCTTCGTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRCPVTS*TASYVG
Trigger: ACCCACATACGAAGCCGTGCAGGAGGTGACGGGACA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGAACCCACAGATATCTaGTCCCGTATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMEPTDI*SRIGYA
Trigger: GGCATATCCTATACGGGAGCAGATATCTGTGGGTTC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAGCAGAAACAGGAGTaGTACCAGTTGTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQQKQE*YQLFQD
Trigger: ATCCTGGAACAACTGGTACCACTCCTGTTTCTGCTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCAGCAGAAACAGGAGTaGTACCAGTTGTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMQQKQE*YQLFQD
Trigger: ATCCTGGAACAACTGGTACCACTCCTGTTTCTGCTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACATGTGGCCTTTGTTaGCGGCTGGTCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTCGLC*RLVRDA
Trigger: TGCATCCCTGACCAGCCGCCAACAAAGGCCACATGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACACTTACAGCTCCCTaGGGATTCCAGCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTLTAP*GFQQQP
Trigger: TGGCTGTTGCTGGAATCCCCAGGGAGCTGTAAGTGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGACTGCACGTGTTCGTaGGGCACTTCAAACCTGTTA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSDCTCS*GTSNLL
Trigger: TAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGCGGTAAGTGATGGCTaGCGCAGGCTGAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRAVSDG*RRLKDN
Trigger: GTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGTCAGGACCCACCATTaGGATGCCAAAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMVRTHH*DAKKVE
Trigger: TTCAACCTTTTTGGCATCCCAATGGTGGGTCCTGAC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACCTTCATCCAGAACTaGAGTGATGAGGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTFIQN*SDEEAG
Trigger: CCCGGCCTCCTCATCACTCCAGTTCTGGATGAAGGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCAGAGTGGTTGTATTTaGCTGCTGTGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMQSGCI*LLCGED
Trigger: ATCTTCCCCACACAGCAGCCAAATACAACCACTCTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGAGGGTTCTTTCGACTaGCCAGAGTGGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLEGSFD*PEWLYL
Trigger: CAAATACAACCACTCTGGCCAGTCGAAAGAACCCTC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGACTCCAGAAGAATTaGATGCCTCCCAGATACAGC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGLQKN*MPPRYS
Trigger: GCTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTTCTTGTACCCTaGGGGCTGGTCTCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSILLVP*GLVSGE
Trigger: TTCTCCCGAGACCAGCCCCCAGGGTACAAGAAGAAT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGAACGTCACATCCATaGCATTGCTGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGTSHP*HCCSAG
Trigger: TCCTGCTGAACAGCAATGCCATGGATGTGACGTTCC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCCTGGACTCCAAATGTaGCATGTAGGGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSPGLQM*HVGRVV
Trigger: AACCACCCTCCCTACATGCCACATTTGGAGTCCAGG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAAAGCCCATGAATTTCTaGCGGCTTAAGTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLKPMNF*RLKWVF
Trigger: GAACACCCACTTAAGCCGCCAGAAATTCATGGGCTT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGGCTGGCAGAAAAGCTaGCCAAGTAATAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLGWQKS*PSNRVL
Trigger: AAGGACTCTATTACTTGGCCAGCTTTTCTGCCAGCC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGCTGGCAGAAAAGCTaGCCAAGTAATAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGWQKS*PSNRVL
Trigger: AAGGACTCTATTACTTGGCCAGCTTTTCTGCCAGCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTTTGCATCGTATTCTaGCTGGCAGAAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLCIVF*LAEKLA
Trigger: GGCCAGCTTTTCTGCCAGCCAGAATACGATGCAAAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAATCCTGCATTTGTGTTaGCAAGGTTGCCCTCTACAT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLILHLC*QGCPLH
Trigger: ATGTAGAGGGCAACCTTGTCAACACAAATGCAGGAT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGATCCTGCATTTGTGTTaGCAAGGTTGCCCTCTACAT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMILHLC*QGCPLH
Trigger: ATGTAGAGGGCAACCTTGTCAACACAAATGCAGGAT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCAGCAGCATTTCCACTaGAGGACTGCACGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNQQHFH*RTARVR
Trigger: ACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAATGGTGCGGTAAGTaGTGGCTGGCGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQWCGK*WLAQAE
Trigger: TTCAGCCTGCGCCAGCCATCACTTACCGCACCATTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCATATTCGTAACGACTaGGGTGAAATCCAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYHIRND*GEIQAP
Trigger: GGGCGCTTGGATTTCACCTCAGTCGTTACGAATATG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGCCATAGGGTTTACTTaGGGAAGAGTTGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMAIGFT*GRVVGD
Trigger: ATCTCCAACAACTCTTCCTCAAGTAAACCCTATGGC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGCCAGACCTCCCCAATaGGTGGAGTCACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGARPPQ*VESLHL
Trigger: CAGATGGAGTGACTCCACTCATTGGGGAGGTCTGGC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAACCTCCAAGCGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLTSKRF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACTTCTTCAAGTGAGTTaGCTCTTCCTTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLLLQVS*LFLFPP
Trigger: GGGAGGAAAAAGGAAGAGTCAACTCACTTGAAGAAG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTCCAAACTCTCTTTTaGGCTTTGCCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLQTLF*ALPAQI
Trigger: GATCTGAGCAGGCAAAGCTCAAAAGAGAGTTTGGAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCGGGCTGTGAATCCTaGATTTGTGTTGACAAGGTT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPGCES*ICVDKV
Trigger: AACCTTGTCAACACAAATGCAGGATTCACAGCCCGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTCTCTCATTACCTCTTaGAGCCGCTCCCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSLITS*SRSLSV
Trigger: GACAGAGAGGGAGCGGCTGCAAGAGGTAATGAGAGA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACAGTCGAGTGGAGAGCTaGAAGAACTGGTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSRVES*KNWSAN
Trigger: GTTTGCTGACCAGTTCTTGCAGCTCTCCACTCGACT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCATAGAAGTCGAGAATaGCCCCAATGGTGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYHRSRE*PQWCGK
Trigger: CTTACCGCACCATTGGGGGCATTCTCGACTTCTATG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACATAAGGGAGCTGTGCTaGGCGATTTCTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNIRELC*AISLHD
Trigger: GTCGTGGAGAGAAATCGCGCAGCACAGCTCCCTTAT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACATCATAAGGGAGCTGTaGTGCGCGATTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYIIREL*CAISLH
Trigger: GTGGAGAGAAATCGCGCAGCACAGCTCCCTTATGAT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCATACAGAGAGTCTTaGAGAACAGGTACCCATCCA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPYRES*RTGTHP
Trigger: TGGATGGGTACCTGTTCTGCAAGACTCTCTGTATGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGCCCCAGTGCTGCACTaGATCCATACAGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNAPVLH*IHTESL
Trigger: AAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACATAAGAACTGTTGGTaGACATCCCAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLHKNCW*TSQVLL
Trigger: CAACAGCACTTGGGATGTGCACCAACAGTTCTTATG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATCCATCTCGACTTTTTaGTTCCTCCATCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSISTF*FLHLTW
Trigger: CCAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATGTCCCGTCACCTCCTaGACGGCTTCGTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGCPVTS*TASYVG
Trigger: ACCCACATACGAAGCCGTGCAGGAGGTGACGGGACA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATGTCCTGTCACCTCCTaGACGGCTTCGTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRCPVTS*TASYVG
Trigger: ACCCACATACGAAGCCGTGCAGGAGGTGACAGGACA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTCCCATAGGTATCAATaGTTTGCCCATCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMSHRYQ*FAHHPR
Trigger: TCTGGGATGATGGGCAAAGCATTGATACCTATGGGA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTGTCAGTCACATCGATaGTTAATACCTGTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMCQSHR*LIPVSW
Trigger: CCACGACACAGGTATTAAGCATCGATGTGACTGACA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCACACCTCCCTAACTaGCTATCCCACAGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPHLPN*LSHRAK
Trigger: CTTAGCCCTGTGGGATAGGCAGTTAGGGAGGTGTGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCTTTTGAGCTTTGCCTaGTCAGATCTCAATCTCACC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLLSFA*SDLNLT
Trigger: GGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACTTTTGAGCTTTGCCTaGTCAGATCTCAATCTCACC +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLLLSFA*SDLNLT
Trigger: GGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGCCTTTGTTGGCGGCTaGTCAGGGATGCAATTAATT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSAFVGG*SGMQLI
Trigger: AATTAATTGCATCCCTGACCAGCCGCCAACAAAGGC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACACGTTGGTCACATGTaGCCTTTGTTGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRHVGHM*PLLAAG
Trigger: ACCAGCCGCCAACAAAGGCCACATGTGACCAACGTG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGACTGCACGTGTTCGTaGGGCACTTCAAACCTGTTA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYDCTCS*GTSNLL
Trigger: TAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGAAGGACAACCTCCATaGCATTGCTGTTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMEGQPP*HCCSSE
Trigger: TTCTGATGAACAGCAATGCCATGGAGGTTGTCCTTC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAAGCACGCCAGGGATaGACCATCTCAGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQARQG*TISGHP
Trigger: GGGATGACCTGAGATGGTCCATCCCTGGCGTGCTTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGTCAGGACCCACCATTaGGATGCCAAAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSVRTHH*DAKKVE
Trigger: TTCAACCTTTTTGGCATCCCAATGGTGGGTCCTGAC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAACCTTCATCCAGAACTaGAGTGATGAGGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRTFIQN*SDEEAG
Trigger: CCCGGCCTCCTCATCACTCCAGTTCTGGATGAAGGT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGAGGGTTCTTTCGACTaGCCAGAGTGGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSEGSFD*PEWLYL
Trigger: CAAATACAACCACTCTGGCCAGTCGAAAGAACCCTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGGACTCCAGAAGAATTaGATGCCTCCCAGATACAGC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSGLQKN*MPPRYS
Trigger: GCTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGGAACGTCACATCCATaGCATTGCTGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYGTSHP*HCCSAG
Trigger: TCCTGCTGAACAGCAATGCCATGGATGTGACGTTCC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAGGGTCTTGTCTCCTaGTCCCAATGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQGLVS*SQWYCG
Trigger: ACCACAATACCATTGGGACCAGGAGACAAGACCCTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000620571.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCAGGGTCTTGTCTCCTaGTCCCAATGGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNQGLVS*SQWCCG
Trigger: ACCACAACACCATTGGGACCAGGAGACAAGACCCTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGCATCGTATTCTGGCTaGCAGAAAAGCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSASYSG*QKSWPS
Trigger: ACTTGGCCAGCTTTTCTGCCAGCCAGAATACGATGC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGCATCGTATTCTGGCTaGCAGAAAAGCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYASYSG*QKSWPS
Trigger: ACTTGGCCAGCTTTTCTGCCAGCCAGAATACGATGC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATGGAGTCACTCCATCTaGACTATTCACCCATATCTT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLWSHSI*TIHPYL
Trigger: AAGATATGGGTGAATAGTTCAGATGGAGTGACTCCA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCCAGGATTCTGGGAGTaGATGGGGGATTATTTAGGT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSPGFWE*MGDYLG
Trigger: ACCTAAATAATCCCCCATTCACTCCCAGAATCCTGG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCATGTCACCTGGTCTaGCACAAACTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPCHLV*HKLMEQ
Trigger: CTGCTCCATGAGTTTGTGTCAGACCAGGTGACATGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGACTTTCTTGAGATGCTaGTTAGCTTCAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMTFLRC*LASRPG
Trigger: TCCAGGTCTTGAAGCTAATCAGCATCTCAAGAAAGT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTTCTTCAAGTGAGTTaGCTCTTCCTTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLLQVS*LFLFPP
Trigger: GGGAGGAAAAAGGAAGAGTCAACTCACTTGAAGAAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCCGGGCTGTGAATCCTaGATTTGTGTTGACAAGGTT +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYPGCES*ICVDKV
Trigger: AACCTTGTCAACACAAATGCAGGATTCACAGCCCGG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACAGTAGGGGCCCAATaGTCGAGTCAAACAAAACAC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTVGAQ*SSQTKH
Trigger: GTGTTTTGTTTGACTCGAGCATTGGGCCCCTACTGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACACAGTAGGGGCCCAATaGTCGAGTCAAACAAAACAC +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYTVGAQ*SSQTKH
Trigger: GTGTTTTGTTTGACTCGAGCATTGGGCCCCTACTGT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGAATGTCATACTGCTTaGCCCAGTGCTGCACTGCAT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNECHTA*PSAALH
Trigger: ATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGAACCCACAGATATCTaGTCCCGTATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSEPTDI*SRIGYA
Trigger: GGCATATCCTATACGGGAGCAGATATCTGTGGGTTC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTCCCATAGGTATCAATaGTTTGCCCATCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSSHRYQ*FAHHPR
Trigger: TCTGGGATGATGGGCAAAGCATTGATACCTATGGGA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTTTTGAGCTTTGCCTaGTCAGATCTCAATCTCACC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLLSFA*SDLNLT
Trigger: GGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCTCTCTTTTGAGCTTTaGCTGCTCAGATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLSFEL*LLRSQS
Trigger: AGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACTCTCTTTTGAGCTTTaGCTGCTCAGATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLLSFEL*LLRSQS
Trigger: AGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACACGTTGGTCACATGTaGCCTTTGTTGGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGHVGHM*PLLAAG
Trigger: ACCAGCCGCCAACAAAGGCCACATGTGACCAACGTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAACACTTACAGCTCCCTaGGGATTCCAGCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRTLTAP*GFQQQP
Trigger: TGGCTGTTGCTGGAATCCCCAGGGAGCTGTAAGTGT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGAGAGCTGCAAGAACTaGTCAGCAAACAGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRESCKN*SANSRG
Trigger: GCCCCTACTGTTTGCTGACCAGTTCTTGCAGCTCTC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTTGAACAACTTGCTCTaGAGTGTTTCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLNNLL*SVSQEH
Trigger: GTGTTCTTGGGAAACACTCCAGAGCAAGTTGTTCAA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGTTGTTGGAGATGGCTaGATCCACAATGATGACAAG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSVVGDG*IHNDDK
Trigger: CTTGTCATCATTGTGGATCCAGCCATCTCCAACAAC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTTGAGGAAGAGTTGTTaGAGATGGCTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLRKSC*RWLDPQ
Trigger: TTGTGGATCCAGCCATCTCCAACAACTCTTCCTCAA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGTCAGGACCCACCATTaGGATGCCAAAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYVRTHH*DAKKVE
Trigger: TTCAACCTTTTTGGCATCCCAATGGTGGGTCCTGAC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTATTTGGCTGCTGTGTaGGGAAGATGTAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNYLAAV*GRCSLL
Trigger: GAGGAGGCTACATCTTCCCCACACAGCAGCCAAATA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAGAGTGGTTGTATTTaGCTGCTGTGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQSGCI*LLCGED
Trigger: ATCTTCCCCACACAGCAGCCAAATACAACCACTCTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTTCGACTGGCCAGAGTaGTTGTATTTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNFDWPE*LYLAAV
Trigger: CACAGCAGCCAAATACAACCACTCTGGCCAGTCGAA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCAAGCCCATGAATTTCTaGCGGCTTAAGTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSKPMNF*RLKWVF
Trigger: GAACACCCACTTAAGCCGCCAGAAATTCATGGGCTT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCTTTGCATCGTATTCTaGCTGGCAGAAAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNLCIVF*LAEKLA
Trigger: GGCCAGCTTTTCTGCCAGCCAGAATACGATGCAAAG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTAGCTCTAGATATTCTTaGACAACTTGCTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSSSRYS*TTCSGV
Trigger: CACTCCAGAGCAAGTTGTTCAAGAATATCTAGAGCT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACATATTCGTAACGACTaGGGTGAAATCCAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRHIRND*GEIQAP
Trigger: GGGCGCTTGGATTTCACCTCAGTCGTTACGAATATG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCCACTGAATCATAAGTaGAGTCCCTTCTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYPLNHK*SPFSHP
Trigger: TGGATGAGAGAAGGGACTTCACTTATGATTCAGTGG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATATTGTGTAACTCGTTaGCAAATTCAGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLYCVTR*QIQGSL
Trigger: AAGGCTTCCCTGAATTTGTCAACGAGTTACACAATA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTATTGTGTAACTCGTTaGCAAATTCAGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMYCVTR*QIQGSL
Trigger: AAGGCTTCCCTGAATTTGTCAACGAGTTACACAATA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGCCATAGGGTTTACTTaGGGAAGAGTTGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSAIGFT*GRVVGD
Trigger: ATCTCCAACAACTCTTCCTCAAGTAAACCCTATGGC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCATATCTTCATATCTaGACCCCTGTCATATGGGCC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPYLHI*TPVIWA
Trigger: GGCCCATATGACAGGGGTTCAGATATGAAGATATGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGTTTGTGGAACATCCTaGGACCGAACCATCAACAAA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSVCGTS*DRTINK
Trigger: TTTGTTGATGGTTCGGTCTCAGGATGTTCCACAAAC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCAAGCGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCGCTTGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCAAGCGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCGCTTGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACCTCCAAGCGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTSKRF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCATGTCACCTGGTCTaGCACAAACTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPCHLV*HKLMEQ
Trigger: CTGCTCCATGAGTTTGTGTCAGACCAGGTGACATGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTACTTTCTTGAGATGCTaGTTAGCTTCAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSTFLRC*LASRPG
Trigger: TCCAGGTCTTGAAGCTAATCAGCATCTCAAGAAAGT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCGGGCTGTGAATCCTaGATTTGTGTTGACAAGGTT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPGCES*ICVDKV
Trigger: AACCTTGTCAACACAAATGCAGGATTCACAGCCCGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATCTCTCATTACCTCTTaGAGCCGCTCCCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGSLITS*SRSLSV
Trigger: GACAGAGAGGGAGCGGCTGCAAGAGGTAATGAGAGA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAAGTCGAGTGGAGAGCTaGAAGAACTGGTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRSRVES*KNWSAN
Trigger: GTTTGCTGACCAGTTCTTGCAGCTCTCCACTCGACT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATAAGGGAGCTGTGCTaGGCGATTTCTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGIRELC*AISLHD
Trigger: GTCGTGGAGAGAAATCGCGCAGCACAGCTCCCTTAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATCATAAGGGAGCTGTaGTGCGCGATTTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRIIREL*CAISLH
Trigger: GTGGAGAGAAATCGCGCAGCACAGCTCCCTTATGAT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGGTGCACATCCCAAGTaGTGTTGTCCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRGAHPK*CCPRRT
Trigger: AGTTCTACGAGGACAACAGCACTTGGGATGTGCACC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCATAAGAACTGTTGGTaGACATCCCAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSHKNCW*TSQVLL
Trigger: CAACAGCACTTGGGATGTGCACCAACAGTTCTTATG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCATAAGAACTGTTGGTaGACATCCCAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYHKNCW*TSQVLL
Trigger: CAACAGCACTTGGGATGTGCACCAACAGTTCTTATG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTCCATCTCGACTTTTTaGTTCCTCCATCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSISTF*FLHLTW
Trigger: CCAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGAACCCACAGATATCTaGTCCCGTATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNEPTDI*SRIGYA
Trigger: GGCATATCCTATACGGGAGCAGATATCTGTGGGTTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTCCCATAGGTATCAATaGTTTGCCCATCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSHRYQ*FAHHPR
Trigger: TCTGGGATGATGGGCAAAGCATTGATACCTATGGGA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCTTTTGAGCTTTGCCTaGTCAGATCTCAATCTCACC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSLLSFA*SDLNLT
Trigger: GGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACAATTCATTTACCACTaGACATTCAGCAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLQFIYH*TFSRNR
Trigger: CCTGTTTCTGCTGAATGTCCAGTGGTAAATGAATTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACAGCAACAGCCACGTTaGTCACATGTGGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRQQQPR*SHVAFV
Trigger: AACAAAGGCCACATGTGACCAACGTGGCTGTTGCTG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCACTTTGATGCTAAATaGCTGTCTGGAGATTTCAAC +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMHFDAK*LSGDFN
Trigger: GTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGAAGGACAACCTCCATaGCATTGCTGTTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSEGQPP*HCCSSE
Trigger: TTCTGATGAACAGCAATGCCATGGAGGTTGTCCTTC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTGAGGAAGAGTTGTTaGAGATGGCTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYLRKSC*RWLDPQ
Trigger: TTGTGGATCCAGCCATCTCCAACAACTCTTCCTCAA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAACCAAACAGCACAGTTaGGATTGGTATAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLTKQHS*DWYNQE
Trigger: TTCCTGATTATACCAATCCCAACTGTGCTGTTTGGT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCAGAGTGGTTGTATTTaGCTGCTGTGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNQSGCI*LLCGED
Trigger: ATCTTCCCCACACAGCAGCCAAATACAACCACTCTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATTCGACTGGCCAGAGTaGTTGTATTTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRFDWPE*LYLAAV
Trigger: CACAGCAGCCAAATACAACCACTCTGGCCAGTCGAA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGAGGGTTCTTTCGACTaGCCAGAGTGGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNEGSFD*PEWLYL
Trigger: CAAATACAACCACTCTGGCCAGTCGAAAGAACCCTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGGAACGTCACATCCATaGCATTGCTGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRGTSHP*HCCSAG
Trigger: TCCTGCTGAACAGCAATGCCATGGATGTGACGTTCC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCTGGACTCCAAATGTaGCATGTAGGGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPGLQM*HVGRVV
Trigger: AACCACCCTCCCTACATGCCACATTTGGAGTCCAGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAGGGTCTTGTCTCCTaGTCCCAATGGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQGLVS*SQWCCG
Trigger: ACCACAACACCATTGGGACCAGGAGACAAGACCCTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACAAGCCCATGAATTTCTaGCGGCTTAAGTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNKPMNF*RLKWVF
Trigger: GAACACCCACTTAAGCCGCCAGAAATTCATGGGCTT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGGCTGGCAGAAAAGCTaGCCAAGTAATAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNGWQKS*PSNRVL
Trigger: AAGGACTCTATTACTTGGCCAGCTTTTCTGCCAGCC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGCATCGTATTCTGGCTaGCAGAAAAGCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRASYSG*QKSWPS
Trigger: ACTTGGCCAGCTTTTCTGCCAGCCAGAATACGATGC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGCTTCCAAACACTGGTaGAGAAGGCAGATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYASKHW*RRQIFQ
Trigger: TTGAAAAATCTGCCTTCTTCACCAGTGTTTGGAAGC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATCTGATATTCTGCTGTaGGAAGAACATTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSDILL*EEHCQH
Trigger: ATGTTGACAATGTTCTTCTCACAGCAGAATATCAGA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGAAACGATTAGATGTCTaGTATTCTGCTGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMKRLDV*YSAVRR
Trigger: TCTTCTCACAGCAGAATATCAGACATCTAATCGTTT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCACTGAATCATAAGTaGAGTCCCTTCTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPLNHK*SPFSHP
Trigger: TGGATGAGAGAAGGGACTTCACTTATGATTCAGTGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTGGAGTCACTCCATCTaGACTATTCACCCATATCTT +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYWSHSI*TIHPYL
Trigger: AAGATATGGGTGAATAGTTCAGATGGAGTGACTCCA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGTTTGTGGAACATCCTaGGACCGAACCATCAACAAA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNVCGTS*DRTINK
Trigger: TTTGTTGATGGTTCGGTCTCAGGATGTTCCACAAAC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACCTCCAAGCGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTSKRF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATGGGATCATAAATCTTaGACTGCAGCATTTCATTCT +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLWDHKS*TAAFHS
Trigger: AGAATGAAATGCTGCAGTTCAAGATTTATGATCCCA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCACCTCCAAGTGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSTSKWF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCACTTGGAGGT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACACTTTCTTGAGATGCTaGTTAGCTTCAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYTFLRC*LASRPG
Trigger: TCCAGGTCTTGAAGCTAATCAGCATCTCAAGAAAGT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCTTCTTCAAGTGAGTTaGCTCTTCCTTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNLLQVS*LFLFPP
Trigger: GGGAGGAAAAAGGAAGAGTCAACTCACTTGAAGAAG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACTCCAAACTCTCTTTTaGGCTTTGCCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLQTLF*ALPAQI
Trigger: GATCTGAGCAGGCAAAGCTCAAAAGAGAGTTTGGAG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGAACATTGTCAACATTaGTTCCAAACACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSEHCQH*FQTLVK
Trigger: CTTCACCAGTGTTTGGAAGCAATGTTGACAATGTTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAACAGTAGGGGCCCAATaGTCGAGTCAAACAAAACAC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRTVGAQ*SSQTKH
Trigger: GTGTTTTGTTTGACTCGAGCATTGGGCCCCTACTGT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCATACAGAGAGTCTTaGAGAACAGGTACCCATCCA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPYRES*RTGTHP
Trigger: TGGATGGGTACCTGTTCTGCAAGACTCTCTGTATGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACAGAAAACGGATAAAATaGACCCAACTGCATCCACCG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNRKRIK*TQLHPP
Trigger: CGGTGGATGCAGTTGGGTGCATTTTATCCGTTTTCT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCATAAGAACTGTTGGTaGACATCCCAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNHKNCW*TSQVLL
Trigger: CAACAGCACTTGGGATGTGCACCAACAGTTCTTATG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTCCATCTCGACTTTTTaGTTCCTCCATCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSISTF*FLHLTW
Trigger: CCAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTCCCATAGGTATCAATaGTTTGCCCATCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSHRYQ*FAHHPR
Trigger: TCTGGGATGATGGGCAAAGCATTGATACCTATGGGA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGAAAATTATATGGCTTTaGATCGTATTCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMKIIWL*IVFWLA
Trigger: TGCCAGCCAGAATACGATGCAAAGCCATATAATTTT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTGTCAGTCACATCGATaGTTAATACCTGTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNCQSHR*LIPVSW
Trigger: CCACGACACAGGTATTAAGCATCGATGTGACTGACA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCTCTCTTTTGAGCTTTaGCTGCTCAGATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYLSFEL*LLRSQS
Trigger: AGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCAATTCATTTACCACTaGACATTCAGCAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSQFIYH*TFSRNR
Trigger: CCTGTTTCTGCTGAATGTCCAGTGGTAAATGAATTG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGCCTTTGTTGGCGGCTaGTCAGGGATGCAATTAATT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRAFVGG*SGMQLI
Trigger: AATTAATTGCATCCCTGACCAGCCGCCAACAAAGGC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAGCAACAGCCACGTTaGTCACATGTGGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQQQPR*SHVAFV
Trigger: AACAAAGGCCACATGTGACCAACGTGGCTGTTGCTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAAACCTGTTATTGGTTTaGTCAGTCAACTTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLNLLLV*SVNLKW
Trigger: CCACTTTAAGTTGACTGACCAAACCAATAACAGGTT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCACTTTGATGCTAAATaGCTGTCTGGAGATTTCAAC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSHFDAK*LSGDFN
Trigger: GTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGAAGGACAACCTCCATaGCATTGCTGTTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNEGQPP*HCCSSE
Trigger: TTCTGATGAACAGCAATGCCATGGAGGTTGTCCTTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAGCACAGTTGGGATTaGTATAATCAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQHSWD*YNQETQ
Trigger: CTGTGTTTCCTGATTATACCAATCCCAACTGTGCTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTATTTAGGTTGTTTGTaGAACATCCTGAGACCGAAC +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSYLGCL*NILRPN
Trigger: GTTCGGTCTCAGGATGTTCCACAAACAACCTAAATA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATATTTGGCTGCTGTGTaGGGAAGATGTAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGYLAAV*GRCSLL
Trigger: GAGGAGGCTACATCTTCCCCACACAGCAGCCAAATA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAGGGTCTTGTCTCCTaGTCCCAATGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQGLVS*SQWYCG
Trigger: ACCACAATACCATTGGGACCAGGAGACAAGACCCTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000620571.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGCATCGTATTCTGGCTaGCAGAAAAGCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGASYSG*QKSWPS
Trigger: ACTTGGCCAGCTTTTCTGCCAGCCAGAATACGATGC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGCTTCCAAACACTGGTaGAGAAGGCAGATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNASKHW*RRQIFQ
Trigger: TTGAAAAATCTGCCTTCTTCACCAGTGTTTGGAAGC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTCTGATATTCTGCTGTaGGAAGAACATTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSSDILL*EEHCQH
Trigger: ATGTTGACAATGTTCTTCTCACAGCAGAATATCAGA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACAGCTCTAGATATTCTTaGACAACTTGCTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSSRYS*TTCSGV
Trigger: CACTCCAGAGCAAGTTGTTCAAGAATATCTAGAGCT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCACTGAATCATAAGTaGAGTCCCTTCTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPLNHK*SPFSHP
Trigger: TGGATGAGAGAAGGGACTTCACTTATGATTCAGTGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGCCTTTAAAATCCACTaGATCATAAGTGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSAFKIH*IISEVP
Trigger: AGGGACTTCACTTATGATTCAGTGGATTTTAAAGGC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCATATCTTCATATCTaGACCCCTGTCATATGGGCC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPYLHI*TPVIWA
Trigger: GGCCCATATGACAGGGGTTCAGATATGAAGATATGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTGGGATCATAAATCTTaGACTGCAGCATTTCATTCT +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSWDHKS*TAAFHS
Trigger: AGAATGAAATGCTGCAGTTCAAGATTTATGATCCCA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGTGAAGCCAAGGAGCTaGGAGTCCCAAATTATAGTG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGVKPRS*ESQIIV
Trigger: CACTATAATTTGGGACTCTCAGCTCCTTGGCTTCAC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACTTTCTTGAGATGCTaGTTAGCTTCAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTFLRC*LASRPG
Trigger: TCCAGGTCTTGAAGCTAATCAGCATCTCAAGAAAGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACTCCAAACTCTCTTTTaGGCTTTGCCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLQTLF*ALPAQI
Trigger: GATCTGAGCAGGCAAAGCTCAAAAGAGAGTTTGGAG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGAACATTGTCAACATTaGTTCCAAACACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYEHCQH*FQTLVK
Trigger: CTTCACCAGTGTTTGGAAGCAATGTTGACAATGTTC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAAGAAAACGGATAAAATaGACCCAACTGCATCCACCG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRRKRIK*TQLHPP
Trigger: CGGTGGATGCAGTTGGGTGCATTTTATCCGTTTTCT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGAACCCACAGATATCTaGTCCCGTATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGEPTDI*SRIGYA
Trigger: GGCATATCCTATACGGGAGCAGATATCTGTGGGTTC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAAATTATATGGCTTTaGATCGTATTCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSKIIWL*IVFWLA
Trigger: TGCCAGCCAGAATACGATGCAAAGCCATATAATTTT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATGTCAGTCACATCGATaGTTAATACCTGTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRCQSHR*LIPVSW
Trigger: CCACGACACAGGTATTAAGCATCGATGTGACTGACA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTTGAACAACTTGCTCTaGAGTGTTTCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNLNNLL*SVSQEH
Trigger: GTGTTCTTGGGAAACACTCCAGAGCAAGTTGTTCAA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCAGCACAGTTGGGATTaGTATAATCAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNQHSWD*YNQETQ
Trigger: CTGTGTTTCCTGATTATACCAATCCCAACTGTGCTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACACCAAACAGCACAGTTaGGATTGGTATAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYTKQHS*DWYNQE
Trigger: TTCCTGATTATACCAATCCCAACTGTGCTGTTTGGT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAGAGTGGTTGTATTTaGCTGCTGTGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQSGCI*LLCGED
Trigger: ATCTTCCCCACACAGCAGCCAAATACAACCACTCTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGAGGGTTCTTTCGACTaGCCAGAGTGGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGEGSFD*PEWLYL
Trigger: CAAATACAACCACTCTGGCCAGTCGAAAGAACCCTC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAAAGCCCATGAATTTCTaGCGGCTTAAGTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGKPMNF*RLKWVF
Trigger: GAACACCCACTTAAGCCGCCAGAAATTCATGGGCTT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGGCTGGCAGAAAAGCTaGCCAAGTAATAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGGWQKS*PSNRVL
Trigger: AAGGACTCTATTACTTGGCCAGCTTTTCTGCCAGCC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACACACACTTCATCATaGACCCAGTTCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTHTSS*TQFIFS
Trigger: ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTCTCTGTCTGAAGGATaGCTTAGCAATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSLSEG*LSNKSR
Trigger: TCTGCTTTTATTGCTAAGCCATCCTTCAGACAGAGA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549489.6
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATCCTGCATTTGTGTTaGCAAGGTTGCCCTCTACAT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGILHLC*QGCPLH
Trigger: ATGTAGAGGGCAACCTTGTCAACACAAATGCAGGAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCAAACGATTAGATGTCTaGTATTCTGCTGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSKRLDV*YSAVRR
Trigger: TCTTCTCACAGCAGAATATCAGACATCTAATCGTTT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGCCTTTAAAATCCACTaGATCATAAGTGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNAFKIH*IISEVP
Trigger: AGGGACTTCACTTATGATTCAGTGGATTTTAAAGGC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGTTTGTGGAACATCCTaGGACCGAACCATCAACAAA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGVCGTS*DRTINK
Trigger: TTTGTTGATGGTTCGGTCTCAGGATGTTCCACAAAC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAACCTCCAAGCGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGTSKRF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCCAAGTGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCACTTGG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACTTCTTCAAGTGAGTTaGCTCTTCCTTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLLQVS*LFLFPP
Trigger: GGGAGGAAAAAGGAAGAGTCAACTCACTTGAAGAAG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCAAAATTATATGGCTTTaGATCGTATTCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSKIIWL*IVFWLA
Trigger: TGCCAGCCAGAATACGATGCAAAGCCATATAATTTT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACAAAATTATATGGCTTTaGATCGTATTCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYKIIWL*IVFWLA
Trigger: TGCCAGCCAGAATACGATGCAAAGCCATATAATTTT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACTCTCTTTTGAGCTTTaGCTGCTCAGATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLSFEL*LLRSQS
Trigger: AGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCACTTTGATGCTAAATaGCTGTCTGGAGATTTCAAC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNHFDAK*LSGDFN
Trigger: GTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATTGAACAACTTGCTCTaGAGTGTTTCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLNNLL*SVSQEH
Trigger: GTGTTCTTGGGAAACACTCCAGAGCAAGTTGTTCAA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGTTGTTGGAGATGGCTaGATCCACAATGATGACAAG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGVVGDG*IHNDDK
Trigger: CTTGTCATCATTGTGGATCCAGCCATCTCCAACAAC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATTGAGGAAGAGTTGTTaGAGATGGCTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLRKSC*RWLDPQ
Trigger: TTGTGGATCCAGCCATCTCCAACAACTCTTCCTCAA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTATTTAGGTTGTTTGTaGAACATCCTGAGACCGAAC +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNYLGCL*NILRPN
Trigger: GTTCGGTCTCAGGATGTTCCACAAACAACCTAAATA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAACACACACTTCATCATaGACCCAGTTCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRTHTSS*TQFIFS
Trigger: ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTCTGATATTCTGCTGTaGGAAGAACATTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSDILL*EEHCQH
Trigger: ATGTTGACAATGTTCTTCTCACAGCAGAATATCAGA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCAAGCGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCGCTTGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAACCTCCAAGTGGTTTTaGGTGACAGAAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGTSKWF*VTENSH
Trigger: ATGTGAGTTTTCTGTCACTCAAAACCACTTGGAGGT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATGGGGTCCATTCTATaGTTACAAACGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGMGSIL*LQTWTY
Trigger: GTATGTCCACGTTTGTAATCATAGAATGGACCCCAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR GCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACTCTCTTTTGAGCTTTaGCTGCTCAGATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLSFEL*LLRSQS
Trigger: AGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAACACACACTTCATCATaGACCCAGTTCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGTHTSS*TQFIFS
Trigger: ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCAAGCGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCGCTTGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR TCA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCAAGTGGTTTTGAGTaGCAGAAAACTCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPSGFE*QKTHIK
Trigger: TTTTATGTGAGTTTTCTGTCACTCAAAACCACTTGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAATTCATTTACCACTaGACATTCAGCAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQFIYH*TFSRNR
Trigger: CCTGTTTCTGCTGAATGTCCAGTGGTAAATGAATTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATATTTAGGTTGTTTGTaGAACATCCTGAGACCGAAC +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGYLGCL*NILRPN
Trigger: GTTCGGTCTCAGGATGTTCCACAAACAACCTAAATA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAAAACGATTAGATGTCTaGTATTCTGCTGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGKRLDV*YSAVRR
Trigger: TCTTCTCACAGCAGAATATCAGACATCTAATCGTTT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR TCA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATGGGATCATAAATCTTaGACTGCAGCATTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGWDHKS*TAAFHS
Trigger: AGAATGAAATGCTGCAGTTCAAGATTTATGATCCCA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS TCA 90 bp CCACGACTTCCCTCATGTTGTCTAAGGTTCCATATTCGTAACGACTaGGGTGAAATCCAAGCGCCCAGTAGGAGGGAAGGGCTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PRLPSCCLRFHIRND*GEIQAPSRREGLAA
Trigger: GGCGGCCAGCCCTTCCCTCCTACTGGGCGCTTGGATTTCACCTCAGTCGTTACGAATATGGAACCTTAGACAACATGAGGGAAGTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 90 bp TCTCCCAGGCCATACACGTTAGTGCTAGGCAGTCGAGTGGAGAGCTaGAAGAACTGGTCAGCAAACAGTAGGGGCCCAATGCTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: SPRPYTLVLGSRVES*KNWSANSRGPMLES
Trigger: TGACTCGAGCATTGGGCCCCTACTGTTTGCTGACCAGTTCTTGCAGCTCTCCACTCGACTGCCTAGCACTAACGTGTATGGCCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 90 bp CACATAGAAGTCGAGAATGCCCCCAATGGTGCGGTAAGTGATGGCTaGCGCAGGCTGAAGGACAACCTCCATGGCATTGCTGTTCATCAG +
Preference number: 5 (lower is better)
Translates to: HIEVENAPNGAVSDG*RRLKDNLHGIAVHQ
Trigger: CTGATGAACAGCAATGCCATGGAGGTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGCACCATTGGGGGCATTCTCGACTTCTATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS TCA 90 bp TTCCCTATCTGTCTACCAGTAGCGGTCCTTGCCCATTTGGGAAACTaGGCTTCTTTCTTCTGCACTGGGGGACTGGATGCTAGCCATCTC +
Preference number: 5 (lower is better)
Translates to: FPICLPVAVLAHLGN*ASFFCTGGLDASHL
Trigger: GAGATGGCTAGCATCCAGTCCCCCAGTGCAGAAGAAAGAAGCTCAGTTTCCCAAATGGGCAAGGACCGCTACTGGTAGACAGATAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS GCA 90 bp CGACCGCCATGGAGTAGCCATACAGATTGTGAATGTCATACTGCTTaGCCCAGTGCTGCACTGCATCCATACAGAGAGTCTTGCAGAACA +
Preference number: 5 (lower is better)
Translates to: RPPWSSHTDCECHTA*PSAALHPYRESCRT
Trigger: TGTTCTGCAAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTCACAATCTGTATGGCTACTCCATGGCGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 90 bp GAGGGTTCTTTCGACTGGCCAGAGTGGTTGTATTTGGCTGCTGTGTaGGGAAGATGTAGCCTCCTCGAAGGTGAAGTCCAATTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: EGSFDWPEWLYLAAV*GRCSLLEGEVQFCL
Trigger: GAGACAAAATTGGACTTCACCTTCGAGGAGGCTACATCTTCCCCACACAGCAGCCAAATACAACCACTCTGGCCAGTCGAAAGAACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGTCACATGTGGCCTTaGTTGGCGGCTGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGHMWP*LAAGQG
Trigger: TCCCTGACCAGCCGCCAACAAAGGCCACATGTGACC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 90 bp GCCATACAGATTGTGAATGTCATACTGCTTGCCCCAGTGCTGCACTaGATCCATACAGAGAGTCTTGCAGAACAGGTACCCATCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AIQIVNVILLAPVLH*IHTESLAEQVPIQD
Trigger: ATCCTGGATGGGTACCTGTTCTGCAAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTCACAATCTGTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCAGGACACAGGGTCTaGTCTCCTGGTCCCAATGGT +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPGHRV*SPGPNG
Trigger: ACCATTGGGACCAGGAGACAAGACCCTGTGTCCTGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGTGACATTTCTGGCATaGCGCTCCAGGACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMVTFLA*RSRTGL
Trigger: CAGCCCTGTCCTGGAGCGCAATGCCAGAAATGTCAC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS TCA 90 bp CTGAGATTGCTGGGTTCACCCTGGAATAGCTCAAACGCTGACACTTaGCTCTGTTCTGCTCTTCTCCTTTCTTCCAACCCATCTATTCCC +
Preference number: 5 (lower is better)
Translates to: LRLLGSPWNSSNADT*LCSALLLSSNPSIP
Trigger: GGGAATAGATGGGTTGGAAGAAAGGAGAAGAGCAGAACAGAGTCAAGTGTCAGCGTTTGAGCTATTCCAGGGTGAACCCAGCAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS TCA 90 bp GCCACAGTTTCCTGGGGATCTTGGTTTGCTTCAAAAGACCAAACCTaGGATTGCTGGGTTCACCCTGGAATAGCTCAAACGCTGACACTT +
Preference number: 5 (lower is better)
Translates to: ATVSWGSWFASKDQT*DCWVHPGIAQTLTL
Trigger: AAGTGTCAGCGTTTGAGCTATTCCAGGGTGAACCCAGCAATCTCAGGTTTGGTCTTTTGAAGCAAACCAAGATCCCCAGGAAACTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCACATGTGGCCTTTGTaGGCGGCTGGTCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYHMWPL*AAGQGC
Trigger: GCATCCCTGACCAGCCGCCAACAAAGGCCACATGTG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGGTCACATGTGGCCTTaGTTGGCGGCTGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSGHMWP*LAAGQG
Trigger: TCCCTGACCAGCCGCCAACAAAGGCCACATGTGACC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCCAGCAACAGCCACGTaGGTCACATGTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMPATAT*VTCGLC
Trigger: ACAAAGGCCACATGTGACCAACGTGGCTGTTGCTGG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGATCAGGAAACACAGTTaGTCCAGGCCAGACCTCCCC +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMIRKHS*SRPDLP
Trigger: GGGGAGGTCTGGCCTGGACAAACTGTGTTTCCTGAT...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATTAGGGAACACAGTCTaGGCAGCTTCTGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLLGNTV*AASAVA
Trigger: CGCCACAGCAGAAGCTGCCAAGACTGTGTTCCCTAA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCTTCCTCCATCTCACTaGGCTCCCAGTCTCGTAGTC +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLPPSH*APSLVV
Trigger: GACTACGAGACTGGGAGCCAAGTGAGATGGAGGAAG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGACTGGCCAGAGTGGTaGTATTTGGCTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLDWPEW*YLAAVW
Trigger: CCACACAGCAGCCAAATACAACCACTCTGGCCAGTC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCAGGACACAGGGTCTaGTCTCCTGGTCCCAATGGT +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPGHRV*SPGPNG
Trigger: ACCATTGGGACCAGGAGACAAGACCCTGTGTCCTGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS TCA 90 bp TGGAGATTTCAACTTGGTAGGTCAAAGAAGCAGCAGCATTTCCACTaGAGGACTGCACGTGTTCGTGGGGCACTTCAAACCTGTTATTGG +
Preference number: 5 (lower is better)
Translates to: WRFQLGRSKKQQHFH*RTARVRGALQTCYW
Trigger: CCAATAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTGCTTCTTTGACCTACCAAGTTGAAATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGGATGCCAAAAAGGTaGAACTCAAGCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGMPKR*NSSTPG
Trigger: CCCTGGCGTGCTTGAGTTCAACCTTTTTGGCATCCC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACCAGAGTGGTTGTATTaGGCTGCTGTGTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLPEWLY*AAVWGR
Trigger: TCTTCCCCACACAGCAGCCAAATACAACCACTCTGG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGACTGGCCAGAGTGGTaGTATTTGGCTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSDWPEW*YLAAVW
Trigger: CCACACAGCAGCCAAATACAACCACTCTGGCCAGTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGGACTCCAGAAGAATaGGATGCCTCCCAGATACAG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGTPEE*DASQIQ
Trigger: CTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGTCGTGGGGTCATTGTaGAAGGAGGGTGTTATGACC +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLVVGSL*KEGVMT
Trigger: GGTCATAACACCCTCCTTCAACAATGACCCCACGAC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGTCGTGGGGTCATTGTaGAAGGAGGGTGTTATGACC +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMVVGSL*KEGVMT
Trigger: GGTCATAACACCCTCCTTCAACAATGACCCCACGAC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 90 bp CGGCTGGTCAGGGATGCAATTAATTCGTTCCAATTCATTTACCACTaGACATTCAGCAGAAACAGGAGTGGTACCAGTTGTTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RLVRDAINSFQFIYH*TFSRNRSGTSCSRI
Trigger: GATCCTGGAACAACTGGTACCACTCCTGTTTCTGCTGAATGTCCAGTGGTAAATGAATTGGAACGAATTAATTGCATCCCTGACCAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465654.5
ENST00000475668.6
ENST00000497673.5
ENST00000549489.6
ENST00000620571.1
CDS CCA 90 bp GTCAAAGAAGCAGCAGCATTTCCACTGAAGGACTGCACGTGTTCGTaGGGCACTTCAAACCTGTTATTGGTTTGGTCAGTCAACTTAAAG +
Preference number: 5 (lower is better)
Translates to: VKEAAAFPLKDCTCS*GTSNLLLVWSVNLK
Trigger: CTTTAAGTTGACTGACCAAACCAATAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTGCTTCTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCAGGATCTGGGGCTGTaGATTTCAGTGACTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMQDLGL*ISVTLW
Trigger: CCAAAGAGTCACTGAAATCAACAGCCCCAGATCCTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGGTCACATGTGGCCTTaGTTGGCGGCTGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRGHMWP*LAAGQG
Trigger: TCCCTGACCAGCCGCCAACAAAGGCCACATGTGACC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCTTCCTCCATCTCACTaGGCTCCCAGTCTCGTAGTC +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYLPPSH*APSLVV
Trigger: GACTACGAGACTGGGAGCCAAGTGAGATGGAGGAAG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCTTCCTCCATCTCACTaGGCTCCCAGTCTCGTAGTC +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSLPPSH*APSLVV
Trigger: GACTACGAGACTGGGAGCCAAGTGAGATGGAGGAAG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCCAGAGTGGTTGTATTaGGCTGCTGTGTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSPEWLY*AAVWGR
Trigger: TCTTCCCCACACAGCAGCCAAATACAACCACTCTGG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGGACTCCAGAAGAATaGGATGCCTCCCAGATACAG +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGTPEE*DASQIQ
Trigger: CTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCCC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCAGGACACAGGGTCTaGTCTCCTGGTCCCAATGGT +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPGHRV*SPGPNG
Trigger: ACCATTGGGACCAGGAGACAAGACCCTGTGTCCTGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGTGACATTTCTGGCATaGCGCTCCAGGACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNVTFLA*RSRTGL
Trigger: CAGCCCTGTCCTGGAGCGCAATGCCAGAAATGTCAC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGTCGTGGGGTCATTGTaGAAGGAGGGTGTTATGACC +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSVVGSL*KEGVMT
Trigger: GGTCATAACACCCTCCTTCAACAATGACCCCACGAC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 90 bp GAAAAAGCTCAAATTCCTTTGTCCACCAAACAGCACAGTTGGGATTaGTATAATCAGGAAACACAGTTTGTCCAGGCCAGACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: EKAQIPLSTKQHSWD*YNQETQFVQARPPQ
Trigger: TTGGGGAGGTCTGGCCTGGACAAACTGTGTTTCCTGATTATACCAATCCCAACTGTGCTGTTTGGTGGACAAAGGAATTTGAGCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000495045.1
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCCAGCAACAGCCACGTaGGTCACATGTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNPATAT*VTCGLC
Trigger: ACAAAGGCCACATGTGACCAACGTGGCTGTTGCTGG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGCCATAGGGTTTACTaGAGGAAGAGTTGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGHRVY*RKSCWR
Trigger: TCTCCAACAACTCTTCCTCAAGTAAACCCTATGGCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCTGGTCCTTGTAGCCTaGGCCATTGTGATTTCTAGA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMLVLVA*AIVISR
Trigger: TCTAGAAATCACAATGGCCAAGGCTACAAGGACCAG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCCAGAGTGGTTGTATTaGGCTGCTGTGTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSPEWLY*AAVWGR
Trigger: TCTTCCCCACACAGCAGCCAAATACAACCACTCTGG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGACTGGCCAGAGTGGTaGTATTTGGCTGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNDWPEW*YLAAVW
Trigger: CCACACAGCAGCCAAATACAACCACTCTGGCCAGTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCACCTCCAAGCGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMHLQAV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTACACCTCCAAGCGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLHLQAV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGTG...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTGGCCACAGTATCCTTaGTTTGCCCATCATCCCAGA +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSWPQYP*FAHHPR
Trigger: TCTGGGATGATGGGCAAACAAAGGATACTGTGGCCA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTGTGTCGTGGGGTCATaGTTGAAGGAGGGTGTTATG +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSCVVGS*LKEGVM
Trigger: CATAACACCCTCCTTCAACAATGACCCCACGACACA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCAGGATCTGGGGCTGTaGATTTCAGTGACTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSQDLGL*ISVTLW
Trigger: CCAAAGAGTCACTGAAATCAACAGCCCCAGATCCTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATCTGGAGATTTCAACTaGGTAGGTCAAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSGDFN*VGQRSS
Trigger: GCTGCTTCTTTGACCTACCAAGTTGAAATCTCCAGA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAACGACTTCCCTCATGTaGTCTAAGGTTCCATATTCG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLTTSLM*SKVPYS
Trigger: CGAATATGGAACCTTAGACAACATGAGGGAAGTCGT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGGCCATAGGGTTTACTaGAGGAAGAGTTGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSGHRVY*RKSCWR
Trigger: TCTCCAACAACTCTTCCTCAAGTAAACCCTATGGCC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGGGGGATTATTTAGGTaGTTTGTGGAACATCCTGAG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLGGLFR*FVEHPE
Trigger: CTCAGGATGTTCCACAAACAACCTAAATAATCCCCC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGGGGGATTATTTAGGTaGTTTGTGGAACATCCTGAG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMGGLFR*FVEHPE
Trigger: CTCAGGATGTTCCACAAACAACCTAAATAATCCCCC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTCCATACAGAGAGTCTaGCAGAACAGGTACCCATCC +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSSIQRV*QNRYPS
Trigger: GGATGGGTACCTGTTCTGCAAGACTCTCTGTATGGA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTCCATACAGAGAGTCTaGCAGAACAGGTACCCATCC +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSIQRV*QNRYPS
Trigger: GGATGGGTACCTGTTCTGCAAGACTCTCTGTATGGA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATTAGGGAACACAGTCTaGGCAGCTTCTGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLGNTV*AASAVA
Trigger: CGCCACAGCAGAAGCTGCCAAGACTGTGTTCCCTAA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGGGATGCCAAAAAGGTaGAACTCAAGCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRGMPKR*NSSTPG
Trigger: CCCTGGCGTGCTTGAGTTCAACCTTTTTGGCATCCC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTCTGGTCCTTGTAGCCTaGGCCATTGTGATTTCTAGA +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLVLVA*AIVISR
Trigger: TCTAGAAATCACAATGGCCAAGGCTACAAGGACCAG...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACTTCCTCCATCTCACTaGGCTCCCAGTCTCGTAGTC +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLPPSH*APSLVV
Trigger: GACTACGAGACTGGGAGCCAAGTGAGATGGAGGAAG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTTCCATCTCGACTTTTaGCTTCCTCCATCTCACTTG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMFHLDF*LPPSHL
Trigger: CAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGAA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGGGACTCCAGAAGAATaGGATGCCTCCCAGATACAG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNGTPEE*DASQIQ
Trigger: CTGTATCTGGGAGGCATCCAATTCTTCTGGAGTCCC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTGGCCACAGTATCCTTaGTTTGCCCATCATCCCAGA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSWPQYP*FAHHPR
Trigger: TCTGGGATGATGGGCAAACAAAGGATACTGTGGCCA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGCACCTCCAAGTGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMHLQVV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCACTTGGAGGTG...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAATAGGTATCAATGCTTaGCCCATCATCCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLIGINA*PIIPEE
Trigger: CTCTTCTGGGATGATGGGCAAAGCATTGATACCTAT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTGTGTCGTGGGGTCATaGTTGAAGGAGGGTGTTATG +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSCVVGS*LKEGVM
Trigger: CATAACACCCTCCTTCAACAATGACCCCACGACACA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACCAGCAACAGCCACGTaGGTCACATGTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGPATAT*VTCGLC
Trigger: ACAAAGGCCACATGTGACCAACGTGGCTGTTGCTGG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGCTGTGAGAAGAACATaGTCAACATTGCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLAVRRT*STLLPN
Trigger: GTTTGGAAGCAATGTTGACAATGTTCTTCTCACAGC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATCAGGAAACACAGTTaGTCCAGGCCAGACCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGIRKHS*SRPDLP
Trigger: GGGGAGGTCTGGCCTGGACAAACTGTGTTTCCTGAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAAAAGCTCAAATTCCTTaGTCCACCAAACAGCACAGT +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLKAQIP*STKQHS
Trigger: ACTGTGCTGTTTGGTGGACAAAGGAATTTGAGCTTT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATTAGGGAACACAGTCTaGGCAGCTTCTGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLGNTV*AASAVA
Trigger: CGCCACAGCAGAAGCTGCCAAGACTGTGTTCCCTAA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAGGGATGCCAAAAAGGTaGAACTCAAGCACGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGGMPKR*NSSTPG
Trigger: CCCTGGCGTGCTTGAGTTCAACCTTTTTGGCATCCC...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACCAGAGTGGTTGTATTaGGCTGCTGTGTGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRPEWLY*AAVWGR
Trigger: TCTTCCCCACACAGCAGCCAAATACAACCACTCTGG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACCACCTCCAAGCGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYHLQAV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGTG...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCCACCTCCAAGCGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSHLQAV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGTG...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTATCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLSSKAI*KPMNFW
Trigger: CCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGA...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGTCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMSSKAI*KPMNFW
Trigger: CCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGA...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLENYMA*HRILAG
Trigger: GCCAGCCAGAATACGATGCAAAGCCATATAATTTTC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGTCGTGGGGTCATTGTaGAAGGAGGGTGTTATGACC +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRVVGSL*KEGVMT
Trigger: GGTCATAACACCCTCCTTCAACAATGACCCCACGAC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 90 bp AAACAAAACACGATTGTTGCTTCTTCTGGTCACTTTGATGCTAAATaGCTGTCTGGAGATTTCAACTTGGTAGGTCAAAGAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KQNTIVASSGHFDAK*LSGDFNLVGQRSSS
Trigger: GCTGCTGCTTCTTTGACCTACCAAGTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTGACCAGAAGAAGCAACAATCGTGTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTCTGGAGATTTCAACTaGGTAGGTCAAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYSGDFN*VGQRSS
Trigger: GCTGCTTCTTTGACCTACCAAGTTGAAATCTCCAGA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAAACAAAACACGATTGTaGCTTCTTCTGGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLNKTRL*LLLVTL
Trigger: CAAAGTGACCAGAAGAAGCAACAATCGTGTTTTGTT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTTAGTTCCGTTTCCATaGGGAGTTGTGTCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLVPFP*GVVSLL
Trigger: TAACAGAGACACAACTCCCAATGGAAACGGAACTAA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTTACTTGAGGAAGAGTaGTTGGAGATGGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNLLEEE*LEMAGS
Trigger: GGATCCAGCCATCTCCAACAACTCTTCCTCAAGTAA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAAGCTCAAATTCCTTaGTCCACCAAACAGCACAGT +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSKAQIP*STKQHS
Trigger: ACTGTGCTGTTTGGTGGACAAAGGAATTTGAGCTTT...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGATTATTTAGGTTGTTaGTGGAACATCCTGAGACCG +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSDYLGC*WNILRP
Trigger: CGGTCTCAGGATGTTCCACAAACAACCTAAATAATC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGGGGGATTATTTAGGTaGTTTGTGGAACATCCTGAG +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSGGLFR*FVEHPE
Trigger: CTCAGGATGTTCCACAAACAACCTAAATAATCCCCC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACAATGTGCTGCAAACTaGCCAGAGCCCGCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGQCAAN*PEPAKV
Trigger: TACCTTTGCGGGCTCTGGCAAGTTTGCAGCACATTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTCCATCTCGACTTTTaGCTTCCTCCATCTCACTTG +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYFHLDF*LPPSHL
Trigger: CAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGAA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACCACCTCCAAGCGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNHLQAV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCGCTTGGAGGTG...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACATAGGTATCAATGCTTaGCCCATCATCCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYIGINA*PIIPEE
Trigger: CTCTTCTGGGATGATGGGCAAAGCATTGATACCTAT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSENYMA*HRILAG
Trigger: GCCAGCCAGAATACGATGCAAAGCCATATAATTTTC...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGATTTCAGTGACTCTTaGGCTAAAAGCACAATTAGA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMDFSDS*AKSTIR
Trigger: TCTAATTGTGCTTTTAGCCAAAGAGTCACTGAAATC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGCTGTGAGAAGAACATaGTCAACATTGCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYAVRRT*STLLPN
Trigger: GTTTGGAAGCAATGTTGACAATGTTCTTCTCACAGC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAACTTCAAACCTGTTATaGGTTTGGTCAGTCAACTTA +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLTSNLL*VWSVNL
Trigger: TAAGTTGACTGACCAAACCAATAACAGGTTTGAAGT...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCTTAGTTCCGTTTCCATaGGGAGTTGTGTCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSLVPFP*GVVSLL
Trigger: TAACAGAGACACAACTCCCAATGGAAACGGAACTAA...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACGACTTCCCTCATGTaGTCTAAGGTTCCATATTCG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTTSLM*SKVPYS
Trigger: CGAATATGGAACCTTAGACAACATGAGGGAAGTCGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp GATTACAAACGTGGACATACACACACTTCATCATGGACCCAGTTCATCTTCAGTTTATTGTGTAACTCGTaGACAAATTCAGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: DYKRGHTHTSSWTQFIFSLLCNS*TNSGKP
Trigger: AGGCTTCCCTGAATTTGTCAACGAGTTACACAATAA...ACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGTATGTCCACGTTTGTAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTTCTTGAGATGGAACCATCAACAAAGTaGGAGACTTCATTCATATCA +
Preference number: 5 (lower is better)
Translates to: PTAYNQLADVLSGYFLEMEPSTK*ETSFIS
Trigger: TGATATGAATGAAGTCTCCAACTTTGTTGATGGTTC...CATCTCAAGAAAGTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp AACTCTCTTTTGAGCTTTGCCTGCTCAGATCTCAATCTCACCAGTAGCCCTTTAGAACCATCAACAAAGTaGGAGACTTCATTCATATCA +
Preference number: 5 (lower is better)
Translates to: NSLLSFACSDLNLTSSPLEPSTK*ETSFIS
Trigger: TGATATGAATGAAGTCTCCAACTTTGTTGATGGTTC...TAAAGGGCTACTGGTGAGATTGAGATCTGAGCAGGCAAAGCTCAAAAGAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGATTATTTAGGTTGTTaGTGGAACATCCTGAGACCG +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYDYLGC*WNILRP
Trigger: CGGTCTCAGGATGTTCCACAAACAACCTAAATAATC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACTGGTCCTTGTAGCCTaGGCCATTGTGATTTCTAGA +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLVLVA*AIVISR
Trigger: TCTAGAAATCACAATGGCCAAGGCTACAAGGACCAG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTTCCATCTCGACTTTTaGCTTCCTCCATCTCACTTG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNFHLDF*LPPSHL
Trigger: CAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGAA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACATAGGTATCAATGCTTaGCCCATCATCCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNIGINA*PIIPEE
Trigger: CTCTTCTGGGATGATGGGCAAAGCATTGATACCTAT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSENYMA*HRILAG
Trigger: GCCAGCCAGAATACGATGCAAAGCCATATAATTTTC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATGTGTCGTGGGGTCATaGTTGAAGGAGGGTGTTATG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGCVVGS*LKEGVM
Trigger: CATAACACCCTCCTTCAACAATGACCCCACGACACA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 90 bp GAGAAGTATTTTATTGGCTTAATTTACCATCGTGAAGAGAAAAGGTaGCGTTGGATCAACAACTCTGTGTTCAATGGCAAGTACGTGAAC +
Preference number: 5 (lower is better)
Translates to: EKYFIGLIYHREEKR*RWINNSVFNGKYVN
Trigger: GTTCACGTACTTGCCATTGAACACAGAGTTGTTGATCCAACGCCACCTTTTCTCTTCACGATGGTAAATTAAGCCAATAAAATACTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGCTGTGAGAAGAACATaGTCAACATTGCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNAVRRT*STLLPN
Trigger: GTTTGGAAGCAATGTTGACAATGTTCTTCTCACAGC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACTTATTGTGTAACTCGTaGACAAATTCAGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYLLCNS*TNSGKP
Trigger: AGGCTTCCCTGAATTTGTCAACGAGTTACACAATAA...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATTACTTGAGGAAGAGTaGTTGGAGATGGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGLLEEE*LEMAGS
Trigger: GGATCCAGCCATCTCCAACAACTCTTCCTCAAGTAA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGATTATTTAGGTTGTTaGTGGAACATCCTGAGACCG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNDYLGC*WNILRP
Trigger: CGGTCTCAGGATGTTCCACAAACAACCTAAATAATC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACACAGTATCCTTTGTTaGCCCATCATCCCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRHSILC*PIIPEK
Trigger: CTTTTCTGGGATGATGGGCAAACAAAGGATACTGTG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGACACCTCCAAGTGGTTTaGAGTGACAGAAAACTCACA +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRHLQVV*SDRKLT
Trigger: TGTGAGTTTTCTGTCACTCAAAACCACTTGGAGGTG...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATAGGTATCAATGCTTaGCCCATCATCCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRIGINA*PIIPEE
Trigger: CTCTTCTGGGATGATGGGCAAAGCATTGATACCTAT...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNENYMA*HRILAG
Trigger: GCCAGCCAGAATACGATGCAAAGCCATATAATTTTC...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACGATTTCAGTGACTCTTaGGCTAAAAGCACAATTAGA +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYDFSDS*AKSTIR
Trigger: TCTAATTGTGCTTTTAGCCAAAGAGTCACTGAAATC...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCAAACCTGTTATTGGTTaGGTCAGTCAACTTAAAGTG +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSKPVIG*VSQLKV
Trigger: CACTTTAAGTTGACTGACCAAACCAATAACAGGTTT...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TATATTATTCCTCCCACCGCCTATAACCAACTAGCAGATGTTCTTTCTGGATACAAACCTGTTATTGGTTaGGTCAGTCAACTTAAAGTG +
Preference number: 5 (lower is better)
Translates to: YIIPPTAYNQLADVLSGYKPVIG*VSQLKV
Trigger: CACTTTAAGTTGACTGACCAAACCAATAACAGGTTT...GTATCCAGAAAGAACATCTGCTAGTTGGTTATAGGCGGTGGGAGGAATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACTCAAACAAAACACGATaGTTGCTTCTTCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNSNKTR*LLLLVT
Trigger: AGTGACCAGAAGAAGCAACAATCGTGTTTTGTTTGA...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAACGACTTCCCTCATGTaGTCTAAGGTTCCATATTCG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGTTSLM*SKVPYS
Trigger: CGAATATGGAACCTTAGACAACATGAGGGAAGTCGT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAATGGGGTCCGAACCATCAACAAAGTaGGAGACTTCATTCATATCA +
Preference number: 5 (lower is better)
Translates to: LELSQKAFSCVFNKRMGSEPSTK*ETSFIS
Trigger: TGATATGAATGAAGTCTCCAACTTTGTTGATGGTTC...GGACCCCATTCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATTCCATCTCGACTTTTaGCTTCCTCCATCTCACTTG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGFHLDF*LPPSHL
Trigger: CAAGTGAGATGGAGGAAGCAAAAAGTCGAGATGGAA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGACACAGTATCCTTTGTTaGCCCATCATCCCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGHSILC*PIIPEK
Trigger: CTTTTCTGGGATGATGGGCAAACAAAGGATACTGTG...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475668.6
ENST00000632195.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRSSKAI*KPMNFW
Trigger: CCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAATAGGTATCAATGCTTaGCCCATCATCCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGIGINA*PIIPEE
Trigger: CTCTTCTGGGATGATGGGCAAAGCATTGATACCTAT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGAGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRENYMA*HRILAG
Trigger: GCCAGCCAGAATACGATGCAAAGCCATATAATTTTC...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACAAACCTGTTATTGGTTaGGTCAGTCAACTTAAAGTG +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNKPVIG*VSQLKV
Trigger: CACTTTAAGTTGACTGACCAAACCAATAACAGGTTT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp ACACACACTTCATCATGGACCCAGTTCATCTTCAGTAAATGTCATATGATGAACACTTCAAACCTGTTATaGGTTTGGTCAGTCAACTTA +
Preference number: 5 (lower is better)
Translates to: THTSSWTQFIFSKCHMMNTSNLL*VWSVNL
Trigger: TAAGTTGACTGACCAAACCAATAACAGGTTTGAAGT...GTTCATCATATGACATTTACTGAAGATGAACTGGGTCCATGATGAAGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp CTTCAAGACCTGGAACTGTCACAGAAAGCTTTCTCTTGTGTATTTAACAAAAGATTATTGTGTAACTCGTaGACAAATTCAGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LQDLELSQKAFSCVFNKRLLCNS*TNSGKP
Trigger: AGGCTTCCCTGAATTTGTCAACGAGTTACACAATAA...TCTTTTGTTAAATACACAAGAGAAAGCTTTCTGTGACAGTTCCAGGTCTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGSSKAI*KPMNFW
Trigger: CCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS TCA 90 bp TTATTGGTTTGGTCAGTCAACTTAAAGTGGAAACGATTAGATGTCTaGTATTCTGCTGTGAGAAGAACATTGTCAACATTGCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LLVWSVNLKWKRLDV*YSAVRRTLSTLLPN
Trigger: GTTTGGAAGCAATGTTGACAATGTTCTTCTCACAGCAGAATATCAGACATCTAATCGTTTCCACTTTAAGTTGACTGACCAAACCAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAAACAAAACACGATTGTaGCTTCTTCTGGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGNKTRL*LLLVTL
Trigger: CAAAGTGACCAGAAGAAGCAACAATCGTGTTTTGTT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGATCAAACAAAACACGATaGTTGCTTCTTCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGSNKTR*LLLLVT
Trigger: AGTGACCAGAAGAAGCAACAATCGTGTTTTGTTTGA...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS-3UTR CAA 90 bp TCTCTTGTGTATTTAACAAAAGAATGGGGTCCATTCTATGATTACAAACGTGGAACTTCAAACCTGTTATaGGTTTGGTCAGTCAACTTA +
Preference number: 5 (lower is better)
Translates to: SLVYLTKEWGPFYDYKRGTSNLL*VWSVNL
Trigger: TAAGTTGACTGACCAAACCAATAACAGGTTTGAAGT...TCCACGTTTGTAATCATAGAATGGACCCCATTCTTTTGTTAAATACACAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp CTTACAGCTCCCTGGGGATTCCAGCAACAGCCACGTTaGTCACATGTGGCCTTTGTTGGCGGCTGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LTAPWGFQQQPR*SHVAFVGGWSG
Trigger: CCCTGACCAGCCGCCAACAAAGGCCACATGTGACCAACGTGGCTGTTGCTGGAATCCCCAGGGAGCTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465654.5
ENST00000475668.6
ENST00000497673.5
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp GTCGAGAATGCCCCCAATGGTGCGGTAAGTGATGGCTaGCGCAGGCTGAAGGACAACCTCCATGGCATTGCT +
Preference number: 6 (lower is better)
Translates to: VENAPNGAVSDG*RRLKDNLHGIA
Trigger: AGCAATGCCATGGAGGTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGCACCATTGGGGGCATTCTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp ACTTACAGCTCCCTGGGGATTCCAGCAACAGCCACGTaGGTCACATGTGGCCTTTGTTGGCGGCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: TYSSLGIPATAT*VTCGLCWRLVR
Trigger: CCTGACCAGCCGCCAACAAAGGCCACATGTGACCAACGTGGCTGTTGCTGGAATCCCCAGGGAGCTGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465654.5
ENST00000475668.6
ENST00000497673.5
ENST00000549489.6
ENST00000620571.1
CDS TCA 72 bp CATAGAAGTCGAGAATGCCCCCAATGGTGCGGTAAGTaGTGGCTGGCGCAGGCTGAAGGACAACCTCCATGG +
Preference number: 6 (lower is better)
Translates to: HRSRECPQWCGK*WLAQAEGQPPW
Trigger: CCATGGAGGTTGTCCTTCAGCCTGCGCCAGCCATCACTTACCGCACCATTGGGGGCATTCTCGACTTCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp CCATACACGTTAGTGCTAGGCAGTCGAGTGGAGAGCTaGAAGAACTGGTCAGCAAACAGTAGGGGCCCAATG +
Preference number: 6 (lower is better)
Translates to: PYTLVLGSRVES*KNWSANSRGPM
Trigger: CATTGGGCCCCTACTGTTTGCTGACCAGTTCTTGCAGCTCTCCACTCGACTGCCTAGCACTAACGTGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 90 bp TCATACTGCTTGCCCCAGTGCTGCACTGCATCCATACAGAGAGTCTaGCAGAACAGGTACCCATCCAGGATTCTGGGAGTGAATGGGGGA +
Preference number: 6 (lower is better)
Translates to: SYCLPQCCTASIQRV*QNRYPSRILGVNGG
Trigger: TCCCCCATTCACTCCCAGAATCCTGGATGGGTACCTGTTCTGCAAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCAGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS TCA 72 bp TGTCTACCAGTAGCGGTCCTTGCCCATTTGGGAAACTaGGCTTCTTTCTTCTGCACTGGGGGACTGGATGCT +
Preference number: 6 (lower is better)
Translates to: CLPVAVLAHLGN*ASFFCTGGLDA
Trigger: AGCATCCAGTCCCCCAGTGCAGAAGAAAGAAGCTCAGTTTCCCAAATGGGCAAGGACCGCTACTGGTAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS CCA 72 bp TTCGACTGGCCAGAGTGGTTGTATTTGGCTGCTGTGTaGGGAAGATGTAGCCTCCTCGAAGGTGAAGTCCAA +
Preference number: 6 (lower is better)
Translates to: FDWPEWLYLAAV*GRCSLLEGEVQ
Trigger: TTGGACTTCACCTTCGAGGAGGCTACATCTTCCCCACACAGCAGCCAAATACAACCACTCTGGCCAGTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 72 bp AAGAGGGTTCTTTCGACTGGCCAGAGTGGTTGTATTTaGCTGCTGTGTGGGGAAGATGTAGCCTCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: KRVLSTGQSGCI*LLCGEDVASSK
Trigger: CTTCGAGGAGGCTACATCTTCCCCACACAGCAGCCAAATACAACCACTCTGGCCAGTCGAAAGAACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CCA 72 bp TTACCTCTTGCAGCCGCTCCCTCTCTGTCTGAAGGATaGCTTAGCAATAAAAGCAGAGGAGCACAGTCCACC +
Preference number: 6 (lower is better)
Translates to: LPLAAAPSLSEG*LSNKSRGAQST
Trigger: GGTGGACTGTGCTCCTCTGCTTTTATTGCTAAGCCATCCTTCAGACAGAGAGGGAGCGGCTGCAAGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549489.6
CDS CAA 90 bp CAGAAGAGCCAGCCCCCAGCAGTTCCTTCATCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGGCGGCTTAAGTGGGTGTTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: QKSQPPAVPSSSKAI*KPMNFWRLKWVFSA
Trigger: TGCACTGAACACCCACTTAAGCCGCCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGATGAAGGAACTGCTGGGGGCTGGCTCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS TCA 72 bp CCCTCATGTTGTCTAAGGTTCCATATTCGTAACGACTaGGGTGAAATCCAAGCGCCCAGTAGGAGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: PSCCLRFHIRND*GEIQAPSRREG
Trigger: CCCTTCCCTCCTACTGGGCGCTTGGATTTCACCTCAGTCGTTACGAATATGGAACCTTAGACAACATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp GCAGCAGCATTTCCACTGAAGGACTGCACGTGTTCGTaGGGCACTTCAAACCTGTTATTGGTTTGGTCAGTC +
Preference number: 6 (lower is better)
Translates to: AAAFPLKDCTCS*GTSNLLLVWSV
Trigger: GACTGACCAAACCAATAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTCCTTCAGTGGAAATGCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp ACACAGTCTTGGCAGCTTCTGCTGTGGCGACCGCCATaGAGTAGCCATACAGATTGTGAATGTCATACTGCT +
Preference number: 6 (lower is better)
Translates to: TQSWQLLLWRPP*SSHTDCECHTA
Trigger: AGCAGTATGACATTCACAATCTGTATGGCTACTCCATGGCGGTCGCCACAGCAGAAGCTGCCAAGACTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp CAGCCCCCAGCAGTTCCTTCATCATCCAAGGCAATTTaGAAGCCCATGAATTTCTGGCGGCTTAAGTGGGTG +
Preference number: 6 (lower is better)
Translates to: QPPAVPSSSKAI*KPMNFWRLKWV
Trigger: CACCCACTTAAGCCGCCAGAAATTCATGGGCTTCAAAATTGCCTTGGATGATGAAGGAACTGCTGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS GCA 72 bp ATTGTGAATGTCATACTGCTTGCCCCAGTGCTGCACTaGATCCATACAGAGAGTCTTGCAGAACAGGTACCC +
Preference number: 6 (lower is better)
Translates to: IVNVILLAPVLH*IHTESLAEQVP
Trigger: GGGTACCTGTTCTGCAAGACTCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp GCTGCAAGAACTGGTCAGCAAACAGTAGGGGCCCAATaGTCGAGTCAAACAAAACACGATTGTTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AARTGQQTVGAQ*SSQTKHDCCFF
Trigger: GAAGAAGCAACAATCGTGTTTTGTTTGACTCGAGCATTGGGCCCCTACTGTTTGCTGACCAGTTCTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp AATATCAGCATGCTGAACATCATAAGGGAGCTGTGCTaGGCGATTTCTCTCCACGACTTCCCTCATGTTGTC +
Preference number: 6 (lower is better)
Translates to: NISMLNIIRELC*AISLHDFPHVV
Trigger: GACAACATGAGGGAAGTCGTGGAGAGAAATCGCGCAGCACAGCTCCCTTATGATGTTCAGCATGCTGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp TGGAGTAGCCATACAGATTGTGAATGTCATACTGCTTaGCCCAGTGCTGCACTGCATCCATACAGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: WSSHTDCECHTA*PSAALHPYRES
Trigger: AGACTCTCTGTATGGATGCAGTGCAGCACTGGGGCAAGCAGTATGACATTCACAATCTGTATGGCTACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp GAAAAGGTGGCGTTGGATCAACAACTCTGTGTTCAATaGCAAGTACGTGAACATGCCACAGTTTCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: EKVALDQQLCVQ*QVREHATVSWG
Trigger: TCCCCAGGAAACTGTGGCATGTTCACGTACTTGCCATTGAACACAGAGTTGTTGATCCAACGCCACCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497554.1
CDS CAA 72 bp GTCACATCGATGCTTAATACCTGTGTCGTGGGGTCATaGTTGAAGGAGGGTGTTATGACCATGCCACTCACA +
Preference number: 6 (lower is better)
Translates to: VTSMLNTCVVGS*LKEGVMTMPLT
Trigger: TGTGAGTGGCATGGTCATAACACCCTCCTTCAACAATGACCCCACGACACAGGTATTAAGCATCGATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS CAA 90 bp AGGTACCCATCCAGGATTCTGGGAGTGAATGGGGGATTATTTAGGTaGTTTGTGGAACATCCTGAGACCGAACCATCAACAAAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: RYPSRILGVNGGLFR*FVEHPETEPSTKLE
Trigger: CTCCAACTTTGTTGATGGTTCGGTCTCAGGATGTTCCACAAACAACCTAAATAATCCCCCATTCACTCCCAGAATCCTGGATGGGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp ATCAATATCAGCATGCTGAACATCATAAGGGAGCTGTaGTGCGCGATTTCTCTCCACGACTTCCCTCATGTT +
Preference number: 6 (lower is better)
Translates to: INISMLNIIREL*CAISLHDFPHV
Trigger: AACATGAGGGAAGTCGTGGAGAGAAATCGCGCAGCACAGCTCCCTTATGATGTTCAGCATGCTGATATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp TATCTGAACCCCTGTCATATGGGCCATAGGGTTTACTaGAGGAAGAGTTGTTGGAGATGGCTGGATCCACAA +
Preference number: 6 (lower is better)
Translates to: YLNPCHMGHRVY*RKSCWRWLDPQ
Trigger: TTGTGGATCCAGCCATCTCCAACAACTCTTCCTCAAGTAAACCCTATGGCCCATATGACAGGGGTTCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475668.6
ENST00000495045.1
ENST00000549489.6
ENST00000620571.1
CDS CAA 90 bp TCTTCTGGTCACTTTGATGCTAAATGGCTGTCTGGAGATTTCAACTaGGTAGGTCAAAGAAGCAGCAGCATTTCCACTGAAGGACTGCAC +
Preference number: 6 (lower is better)
Translates to: SSGHFDAKWLSGDFN*VGQRSSSISTEGLH
Trigger: GTGCAGTCCTTCAGTGGAAATGCTGCTGCTTCTTTGACCTACCAAGTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTGACCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp TCCAGGATTCTGGGAGTGAATGGGGGATTATTTAGGTaGTTTGTGGAACATCCTGAGACCGAACCATCAACA +
Preference number: 6 (lower is better)
Translates to: SRILGVNGGLFR*FVEHPETEPST
Trigger: TGTTGATGGTTCGGTCTCAGGATGTTCCACAAACAACCTAAATAATCCCCCATTCACTCCCAGAATCCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp GACTGCACGTGTTCGTGGGGCACTTCAAACCTGTTATaGGTTTGGTCAGTCAACTTAAAGTGGAAACGATTA +
Preference number: 6 (lower is better)
Translates to: DCTCSWGTSNLL*VWSVNLKWKRL
Trigger: TAATCGTTTCCACTTTAAGTTGACTGACCAAACCAATAACAGGTTTGAAGTGCCCCACGAACACGTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp CACGTGTTCGTGGGGCACTTCAAACCTGTTATTGGTTaGGTCAGTCAACTTAAAGTGGAAACGATTAGATGT +
Preference number: 6 (lower is better)
Translates to: HVFVGHFKPVIG*VSQLKVETIRC
Trigger: ACATCTAATCGTTTCCACTTTAAGTTGACTGACCAAACCAATAACAGGTTTGAAGTGCCCCACGAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp CACTTTGATGCTAAATGGCTGTCTGGAGATTTCAACTaGGTAGGTCAAAGAAGCAGCAGCATTTCCACTGAA +
Preference number: 6 (lower is better)
Translates to: HFDAKWLSGDFN*VGQRSSSISTE
Trigger: TTCAGTGGAAATGCTGCTGCTTCTTTGACCTACCAAGTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS GCA 72 bp AAGTATAATGTAACAGGATTTAACCACACAGCCTCCTaGAAGAAGTGGGTGGGAAGTTTTTATTTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: KYNVTGFNHTAS*KKWVGSFYFPV
Trigger: CACTGGGAAATAAAAACTTCCCACCCACTTCTTGCAGGAGGCTGTGTGGTTAAATCCTGTTACATTATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465654.5
CDS CCA 72 bp ATCTCAGCTGAAGTACTTGGCAGCGCTTGTTATTGTTaGCAAAATCTAAAATACAGCTCCAGTTCAACCCAA +
Preference number: 6 (lower is better)
Translates to: ISAEVLGSACYC*QNLKYSSSSTQ
Trigger: TTGGGTTGAACTGGAGCTGTATTTTAGATTTTGCCAACAATAACAAGCGCTGCCAAGTACTTCAGCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465654.5
CDS CCA 72 bp AGGGATGCAATTAATTCGTTCCAATTCATTTACCACTaGACATTCAGCAGAAACAGGAGTGGTACCAGTTGT +
Preference number: 6 (lower is better)
Translates to: RDAINSFQFIYH*TFSRNRSGTSC
Trigger: ACAACTGGTACCACTCCTGTTTCTGCTGAATGTCCAGTGGTAAATGAATTGGAACGAATTAATTGCATCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465654.5
ENST00000475668.6
ENST00000497673.5
ENST00000549489.6
ENST00000620571.1
CDS CCA 72 bp ACGATTGTTGCTTCTTCTGGTCACTTTGATGCTAAATaGCTGTCTGGAGATTTCAACTTGGTAGGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: TIVASSGHFDAK*LSGDFNLVGQR
Trigger: TCTTTGACCTACCAAGTTGAAATCTCCAGACAGCCATTTAGCATCAAAGTGACCAGAAGAAGCAACAATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS TCA 72 bp CTTTTGCTAGTAGAGTATTATTTGGGTGATCTCAGCTaGAGTACTTGGCAGCGCTTGTTATTGTTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: LLLVEYYLGDLS*STWQRLLLLAK
Trigger: TTTTGCCAACAATAACAAGCGCTGCCAAGTACTTCAGCTGAGATCACCCAAATAATACTCTACTAGCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465654.5
CDS CAA 72 bp TTTGTGGAACATCCTGAGACCGAACCATCAACAAAGTaGGAGACTTCATTCATATCAATCCAGATTCCATCA +
Preference number: 6 (lower is better)
Translates to: FVEHPETEPSTK*ETSFISIQIPS
Trigger: TGATGGAATCTGGATTGATATGAATGAAGTCTCCAACTTTGTTGATGGTTCGGTCTCAGGATGTTCCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
CDS CAA 72 bp TGTACCAGTGATGTAATTGTTGAAAATTATATGGCTTaGCATCGTATTCTGGCTGGCAGAAAAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: CTSDVIVENYMA*HRILAGRKAGQ
Trigger: TTGGCCAGCTTTTCTGCCAGCCAGAATACGATGCAAAGCCATATAATTTTCAACAATTACATCACTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1
ENST00000631981.1
ENST00000632195.1
CDS TCA 72 bp TGGTCAGTCAACTTAAAGTGGAAACGATTAGATGTCTaGTATTCTGCTGTGAGAAGAACATTGTCAACATTG +
Preference number: 6 (lower is better)
Translates to: WSVNLKWKRLDV*YSAVRRTLSTL
Trigger: CAATGTTGACAATGTTCTTCTCACAGCAGAATATCAGACATCTAATCGTTTCCACTTTAAGTTGACTGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475668.6
ENST00000549489.6
ENST00000620571.1