RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFSD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000151690

Ensembl transcript IDs: ENST00000281416.11, ENST00000392328.6, ENST00000412482.1, ENST00000432036.5, ENST00000434582.5, ENST00000444317.1, ENST00000445546.1, ENST00000486123.1, ENST00000489793.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGAGCGGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACATGGGACAGG +
Preference number: 1 (lower is better)
Translates to: VSGAGLRLRCCCVRG*LVSRWVRVSLTWDR
Trigger: CCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCCGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR CCA 90 bp CTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACATGGGACAGGCTGGGCTCTACCAGC +
Preference number: 1 (lower is better)
Translates to: LRLRCCCVRGWLVSR*VRVSLTWDRLGSTS
Trigger: GCTGGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR TCA 90 bp GATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATGGGTCAGAGTaGGTCTCACATGGGACAGGCTGGGCTCTACCAGCAGGAGAATTT +
Preference number: 1 (lower is better)
Translates to: DAAASGDGWFLDGSE*VSHGTGWALPAGEF
Trigger: AAATTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR GCA 90 bp ACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTaGAGTTGCATACATTACATTGTCCAGTGTCTGACTGTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: TCDPPSHCSGCSCNV*SCIHYIVQCLTVSS
Trigger: TGAAGACACAGTCAGACACTGGACAATGTAATGTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR GCA 90 bp TTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTaGAGTTGTAACGTTTGCAGTTGCATACATTACATTGTCCAGTGT +
Preference number: 1 (lower is better)
Translates to: LVASFTCDPPSHCSG*SCNVCSCIHYIVQC
Trigger: ACACTGGACAATGTAATGTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 90 bp GCACTTTGGGGACAGGAAGAAAAAGTCACAAAGTCCACAAACCCATaGAGGTGTCAGCTCACAAGGCTGGAAATGACTGCATTATCGATT +
Preference number: 1 (lower is better)
Translates to: ALWGQEEKVTKSTNP*RCQLTRLEMTALSI
Trigger: AATCGATAATGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGGTTTGTGGACTTTGTGACTTTTTCTTCCTGTCCCCAAAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
3UTR TCA 90 bp CTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGTTCTTTTCTTTCCTCTCTCTCCTGT +
Preference number: 1 (lower is better)
Translates to: LTLQLILSNQGQRVR*VAHFDCSFLSSLSC
Trigger: ACAGGAGAGAGAGGAAAGAAAAGAACAGTCGAAATGAGCAACTCACCTTACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 90 bp CAAAGTCCACAAACCCATGAAGGTGTCAGCTCACAAGGCTGGAAATaGCTGCATTATCGATTCTGCTGTCACAGTAAATGTTCCATAACA +
Preference number: 1 (lower is better)
Translates to: QSPQTHEGVSSQGWK*LHYRFCCHSKCSIT
Trigger: TGTTATGGAACATTTACTGTGACAGCAGAATCGATAATGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGGTTTGTGGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
3UTR TCA 90 bp GCAGTTGTAACGTTTGCAGTTGCATACATTACATTGTCCAGTGTCTaGCTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTT +
Preference number: 1 (lower is better)
Translates to: AVVTFAVAYITLSSV*LCLHENEYTEIFFL
Trigger: AAGAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATGTAATGTATGCAACTGCAAACGTTACAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 90 bp TCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAAGTCCTCATTaGACTCCATTTCCCTGTTGTAATTCCAATGAGATTACGAAAGTT +
Preference number: 1 (lower is better)
Translates to: SIILNLTKQRTESPH*TPFPCCNSNEITKV
Trigger: AACTTTCGTAATCTCATTGGAATTACAACAGGGAAATGGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR CAA 90 bp CAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTaGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: QSFVPRSNGHCSLRL*SVLLRLSGVMDQFP
Trigger: GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
3UTR-3UTR GCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCTGCGTCTGAGATGCTaGTGCGTCAGGGGATGGCTG +
Preference number: 2 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSLRLRC*CVRGWL
Trigger: CAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp GGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGATACACCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 2 (lower is better)
Translates to: GHCSLRLLSVLLRLSGVMDTPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGTGTATC...CATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
3UTR-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCTAGATGGGTCAGAGTaGGTCTCACATGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYLDGSE*VSHGTG
Trigger: GCCTGTCCCATGTGAGACTCACTCTGACCCATCTAG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTCACATGGGACAGGCTaGGCTCTACCAGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYSHGTG*ALPAGE
Trigger: TTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACC +
Preference number: 2 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYRVSLT*DRLGST
Trigger: GGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCT...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR TCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSMQGVR*AGCPQC
Trigger: ACACTGAGGGCATCCTGCTCATCTCACACCCTGCAT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCCCTCCCGCGGCCAGCTaGGCCTGCTGCTCTTCACTC +
Preference number: 2 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFPPAAS*ACCSSL
Trigger: GAGTGAAGAGCAGCAGGCTCAGCTGGCCGCGGGAGG...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 2 (lower is better)
Translates to: HGEALTLQLILSNQGQRVPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTGAGGCATATCCTGGCTaGGGGGCCTCACCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSEAYPG*GASPCV
Trigger: GACACAGGGTGAGGCCCCCCAGCCAGGATATGCCTC...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGAGGCATATCCTGGCTaGGGGGCCTCACCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFEAYPG*GASPCV
Trigger: GACACAGGGTGAGGCCCCCCAGCCAGGATATGCCTC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGGGCTGGTCTGCGTCTaGGATGCTGCTGCGTCAGGG +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHGLVCV*DAAASG
Trigger: CCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 2 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACATATTTAGAAGCATATaGAGTGCTGTGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYIFRSI*SAVLLQ
Trigger: CTGGAGGAGCACAGCACTGCATATGCTTCTAAATAT...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTACGTCTGAGATGCTGCTaGGTCAGGGGATGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: LLSVTAGFNSYCTGREILRLRCC*VRGWLV
Trigger: AACCAGCCATCCCCTGACGCAGCAGCATCTCAGACG...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR TCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTAACCAAGCAAAGAACTaGAAGTCCTCATTGAACTCC +
Preference number: 2 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSNQAKN*KSSLNS
Trigger: GGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACATTCCATGCAGGGTGTaGGATGAGCAGGATGCCCTC +
Preference number: 2 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHIPCRV*DEQDAL
Trigger: GAGGGCATCCTGCTCATCTCACACCCTGCATGGAAT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 2 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAGCCATTGTTCTGGCTaGAGTTGTAACGTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLSHCSG*SCNVCS
Trigger: ACTGCAAACGTTACAACTGCAGCCAGAACAATGGCT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTCCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 2 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAGCGTCAGGGGATGGCTaGTTTCTAGATGGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEASGDG*FLDGSE
Trigger: CTCTGACCCATCTAGAAACCAGCCATCCCCTGACGC...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTGGGGTGAGCGGGGCTaGTCTGCGTCTGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHWGERG*SASEML
Trigger: CAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCATCCTTCCCATTCATaGTTTCCTATTTACCACCTT +
Preference number: 2 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSHPSHS*FPIYHL
Trigger: AAGGTGGTAAATAGGAAACCATGAATGGGAAGGATG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGTTGGTTGGTTGATTTaGAATAATCGCTTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFVGWLI*NNRLFL
Trigger: CAGAAACAAGCGATTATTTCAAATCAACCAACCAAC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGATAGTTGCTACTTATTaGCATCCTTCCCATTCATGG +
Preference number: 2 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLIVATY*HPSHSW
Trigger: CCATGAATGGGAAGGATGGCAATAAGTAGCAACTAT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATTCCTCTCTCTCCTGTaGTCATCCACAGCTATTATA +
Preference number: 2 (lower is better)
Translates to: HGEALTLQLILSNQGQRVFLSLL*SSTAII
Trigger: TATAATAGCTGTGGATGAGCACAGGAGAGAGAGGAA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 2 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCAACCAAGCAAAGAACTaGAAGTCCTCATTGAACTCC +
Preference number: 2 (lower is better)
Translates to: STFTSKHFHSLHLLSVTANQAKN*KSSLNS
Trigger: GGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTT...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGACTGAGTTGGTTGGTTaGTTTGAAATAATCGCTTGT +
Preference number: 2 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLTELVG*FEIIAC
Trigger: ACAAGCGATTATTTCAAATCAACCAACCAACTCAGT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTATTGGAAAGTATAGTTaGTACTTATTGCCATCCTTC +
Preference number: 2 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFIGKYS*YLLPSF
Trigger: GAAGGATGGCAATAAGTAGCAACTATACTTTCCAAT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCCAACTCTTACTGCACTaGCAGAGAAATTCTATCATC +
Preference number: 2 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAQLLLH*QRNSII
Trigger: GATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTG...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACA +
Preference number: 2 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSWLVSR*VRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGT +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHGQRVR*VAHFDC
Trigger: ACAGTCGAAATGAGCAACTCACCTTACCCTCTGACC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATGCAGTTGTAACGTTTaGAGTTGCATACATTACATT +
Preference number: 2 (lower is better)
Translates to: HGEALTLQLILSNQGQRVCSCNV*SCIHYI
Trigger: AATGTAATGTATGCAACTGCAAACGTTACAACTGCA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACTGTAACGTTTGCAGTTaGATACATTACATTGTCCAG +
Preference number: 2 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHCNVCS*IHYIVQ
Trigger: CTGGACAATGTAATGTATGCAACTGCAAACGTTACA...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATAGCCATTGTTCTGGCTaGAGTTGTAACGTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHSHCSG*SCNVCS
Trigger: ACTGCAAACGTTACAACTGCAGCCAGAACAATGGCT...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCAACTCTTACTGCACTaGCAGAGAAATTCTATCATC +
Preference number: 2 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFQLLLH*QRNSII
Trigger: GATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTG...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAAACCAAGCAAAGAACTaGAAGTCCTCATTGAACTCC +
Preference number: 2 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLNQAKN*KSSLNS
Trigger: GGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTT...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGTTGGTTGGTTGATTTaGAATAATCGCTTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFVGWLI*NNRLFL
Trigger: CAGAAACAAGCGATTATTTCAAATCAACCAACCAAC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR TCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTACTGAGTTGGTTGGTTaGTTTGAAATAATCGCTTGT +
Preference number: 2 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFTELVG*FEIIAC
Trigger: ACAAGCGATTATTTCAAATCAACCAACCAACTCAGT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATATATTTAGAAGCATATaGAGTGCTGTGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHIFRSI*SAVLLQ
Trigger: CTGGAGGAGCACAGCACTGCATATGCTTCTAAATAT...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACTGCAGTTGTAACGTTTaGAGTTGCATACATTACATT +
Preference number: 2 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHCSCNV*SCIHYI
Trigger: AATGTAATGTATGCAACTGCAAACGTTACAACTGCA...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTTCCTCTCTCTCCTGTaGTCATCCACAGCTATTATA +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHFLSLL*SSTAII
Trigger: TATAATAGCTGTGGATGAGCACAGGAGAGAGAGGAA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATAGAACTATGGTGTCATaGAGAAGCCCTCACTTTACA +
Preference number: 2 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHRTMVS*RSPHFT
Trigger: TGTAAAGTGAGGGCTTCTCCATGACACCATAGTTCT...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAATTTCTTATCCCAAATaGAGTATTGGGCAGAACTAT +
Preference number: 2 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLISYPK*SIGQNY
Trigger: ATAGTTCTGCCCAATACTGCATTTGGGATAAGAAAT...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 72 bp CTGGCTGAGGAGCCTGATTCCATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGTCCTCCCGCGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LAEEPDSMQGVR*AGCPQCPPAAS
Trigger: GCTGGCCGCGGGAGGACACTGAGGGCATCCTGCTCATCTCACACCCTGCATGGAATCAGGCTCCTCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR CCA 72 bp AGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACATGGGACAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: RCCCVRGWLVSR*VRVSLTWDRLG
Trigger: GCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR CCA 72 bp GCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACA +
Preference number: 3 (lower is better)
Translates to: AGLRLRCCCVRG*LVSRWVRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR CCA 72 bp TGGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACCAGCAGGAGAATTTTC +
Preference number: 3 (lower is better)
Translates to: WLVSRWVRVSLT*DRLGSTSRRIF
Trigger: GAAAATTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR TCA 72 bp GGACAGGAAGAAAAAGTCACAAAGTCCACAAACCCATaGAGGTGTCAGCTCACAAGGCTGGAAATGACTGCA +
Preference number: 3 (lower is better)
Translates to: GQEEKVTKSTNP*RCQLTRLEMTA
Trigger: TGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGGTTTGTGGACTTTGTGACTTTTTCTTCCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
3UTR-3UTR CAA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTATAGTTGCTACTTATaGCCATCCTTCCCATTCATG +
Preference number: 3 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFYSCYL*PSFPFM
Trigger: CATGAATGGGAAGGATGGCAATAAGTAGCAACTATA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR GCA 72 bp AGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTaGAGTTGTAACGTTTGCAGTTGCATACATTACATT +
Preference number: 3 (lower is better)
Translates to: SFTCDPPSHCSG*SCNVCSCIHYI
Trigger: AATGTAATGTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR GCA 72 bp CCCATGAAGGTGTCAGCTCACAAGGCTGGAAATGACTaGATTATCGATTCTGCTGTCACAGTAAATGTTCCA +
Preference number: 3 (lower is better)
Translates to: PMKVSAHKAGND*IIDSAVTVNVP
Trigger: TGGAACATTTACTGTGACAGCAGAATCGATAATGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
3UTR TCA 72 bp CAAACCCATGAAGGTGTCAGCTCACAAGGCTGGAAATaGCTGCATTATCGATTCTGCTGTCACAGTAAATGT +
Preference number: 3 (lower is better)
Translates to: QTHEGVSSQGWK*LHYRFCCHSKC
Trigger: ACATTTACTGTGACAGCAGAATCGATAATGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
3UTR GCA 72 bp AGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTaGATACATTACATTGTCCAGTGTCTGACTGTGTCT +
Preference number: 3 (lower is better)
Translates to: SHCSGCSCNVCS*IHYIVQCLTVS
Trigger: AGACACAGTCAGACACTGGACAATGTAATGTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR-3UTR CAA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATATAGTTGCTACTTATaGCCATCCTTCCCATTCATG +
Preference number: 3 (lower is better)
Translates to: HGEALTLQLILSNQGQRVYSCYL*PSFPFM
Trigger: CATGAATGGGAAGGATGGCAATAAGTAGCAACTATA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 72 bp CAATTGATCCTGTCTAATCAGGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGTTCTTTTCTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: QLILSNQGQRVR*VAHFDCSFLSS
Trigger: AGAGGAAAGAAAAGAACAGTCGAAATGAGCAACTCACCTTACCCTCTGACCCTGATTAGACAGGATCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR CCA 72 bp AATTTCTTATCCCAAATGCAGTATTGGGCAGAACTATaGTGTCATGGAGAAGCCCTCACTTTACAATTGATC +
Preference number: 3 (lower is better)
Translates to: NFLSQMQYWAEL*CHGEALTLQLI
Trigger: GATCAATTGTAAAGTGAGGGCTTCTCCATGACACCATAGTTCTGCCCAATACTGCATTTGGGATAAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR TCA 72 bp TTGTATCCTTCCCCCAGGCACTTAAATCTTATACTGTaGTTTGTAACTAGTACTGCTTATTTAAGGAACTCT +
Preference number: 3 (lower is better)
Translates to: LYPSPRHLNLIL*FVTSTAYLRNS
Trigger: AGAGTTCCTTAAATAAGCAGTACTAGTTACAAATCACAGTATAAGATTTAAGTGCCTGGGGGAAGGATACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACGGGCTGGTCTGCGTCTaGGATGCTGCTGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HCSLRLLSVLLRLSGVMDGLVCV*DAAASG
Trigger: CCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCC...GTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR TCA 90 bp GGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGAGGGGAACGGCTGCACTaGGGTAAGAAATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GAGLRLRCCCVRGWLVSRGERLH*GKKCML
Trigger: CAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCC...TCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCCTCCCGCGGCCAGCTaGGCCTGCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYPPAAS*ACCSSL
Trigger: GAGTGAAGAGCAGCAGGCTCAGCTGGCCGCGGGAGG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTAGTCCTCCCGCGGCCAGCTaGGCCTGCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LLSVLLRLSGVMDQFPSSPPAAS*ACCSSL
Trigger: GAGTGAAGAGCAGCAGGCTCAGCTGGCCGCGGGAGG...ACTAGAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCCTGCGTCTGAGATGCTaGTGCGTCAGGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPLRLRC*CVRGWL
Trigger: CAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAG...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp GCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCGGTCTGCGTCTGAGATaGTGCTGCGTCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: AALVSASQTVWGDGPVSLGLRLR*CCVRGW
Trigger: CCATCCCCTGACGCAGCAGCATCTCAGACGCAGACC...GAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp GGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATCACATGGGACAGGCTaGGCTCTACCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GAGLRLRCCCVRGWLVSRSHGTG*ALPAGE
Trigger: TTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGA...TCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR CCA 90 bp GGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGAGCGTCAGGGGATGGCTaGTTTCTAGATGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GAGLRLRCCCVRGWLVSRASGDG*FLDGSE
Trigger: CTCTGACCCATCTAGAAACCAGCCATCCCCTGACGC...TCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACGGGCTGGTCTGCGTCTaGGATGCTGCTGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYGLVCV*DAAASG
Trigger: CCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCC...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTCCTCCCGCGGCCAGCTaGGCCTGCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFPPAAS*ACCSSL
Trigger: GAGTGAAGAGCAGCAGGCTCAGCTGGCCGCGGGAGG...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATCACCAAGCAGGCCATaGCAATTCCTCGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GAGLRLRCCCVRGWLVSRSPSRP*QFLGRL
Trigger: CAACCTTCCGAGGAATTGGCATGGCCTGCTTGGTGA...TCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434582.5
3UTR CAA 72 bp GTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTaGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGAC +
Preference number: 4 (lower is better)
Translates to: VPRSNGHCSLRL*SVLLRLSGVMD
Trigger: GTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp CACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCGTCTGAGATGCTGCTaGGTCAGGGGATGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HCSLRLLSVLLRLSGVMDRLRCC*VRGWLV
Trigger: AACCAGCCATCCCCTGACGCAGCAGCATCTCAGACG...GTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp GCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTGCGGCTCTTGTCAGTaGTTCTCAGACTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AALVSASQTVWGDGPVSLCGSCQ*FSDCLG
Trigger: CCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCA...GAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPCCVRG*LVSRWV
Trigger: GACCCATCTAGAAACCAGCCATCCCCTGACGCAGCA...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTGGGGTGAGCGGGGCTaGTCTGCGTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYWGERG*SASEML
Trigger: CAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ATTCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCATGGGGTGAGCGGGGCTaGTCTGCGTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: IQSFVPRSNGHCSLRLLSWGERG*SASEML
Trigger: CAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCA...TGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR TCA 90 bp CACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: HCSLRLLSVLLRLSGVMDMQGVR*AGCPQC
Trigger: ACACTGAGGGCATCCTGCTCATCTCACACCCTGCAT...GTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp CACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: HCSLRLLSVLLRLSGVMDRVSLT*DRLGST
Trigger: GGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCT...GTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp CGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTGCGTCAGGGGATGGCTaGTTTCTAGATGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RLLSVLLRLSGVMDQFPSASGDG*FLDGSE
Trigger: CTCTGACCCATCTAGAAACCAGCCATCCCCTGACGC...AGAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTGGGGTGAGCGGGGCTaGTCTGCGTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFWGERG*SASEML
Trigger: CAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGAGGCATATCCTGGCTaGGGGGCCTCACCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFEAYPG*GASPCV
Trigger: GACACAGGGTGAGGCCCCCCAGCCAGGATATGCCTC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp GTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGAGATACACCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: VPRSNGHCSLRLLSVLLRDTPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGTGTATC...TCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR TCA 90 bp GGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGTCAGACTGTCTGGGGTaGTGGACCAGTTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GHCSLRLLSVLLRLSGVMSDCLG*WTSFPL
Trigger: TAGAGGGAAACTGGTCCATCACCCCAGACAGTCTGA...CATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGGTCTGCGTCTGAGATaGTGCTGCGTCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFGLRLR*CCVRGW
Trigger: CCATCCCCTGACGCAGCAGCATCTCAGACGCAGACC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCCCAGGGAGAAGAGCTaGCTCCCCAGGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLPREKS*LPRLVC
Trigger: ACAAACCAGCCTGGGGAGTCAGCTCTTCTCCCTGGG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCACCTCCCGCGGCCAGCTaGGCCTGCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPPPAAS*ACCSSL
Trigger: GAGTGAAGAGCAGCAGGCTCAGCTGGCCGCGGGAGG...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTGTAGTCGATCCCGATaGCCACAGACAGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYCSRSR*PQTASP
Trigger: TGGCGATGCTGTCTGTGGGCATCGGGATCGACTACA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGAAGGCCCTGCAGGATaGCCTGAGCAGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFEGPAG*PEQMSS
Trigger: TGAGGACATCTGCTCAGGGCATCCTGCAGGGCCTTC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGATGGACACTGTAGTCTaGGGCTCTTGTCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QSFVPRSNGHCSLRLLSVMDTVV*GSCQCF
Trigger: GAAGCACTGACAAGAGCCGCAGACTACAGTGTCCAT...CACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCGAGTACTGCCTGACATaGGACCTTCAAGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPEYCLT*DLQVDF
Trigger: GAAGTCAACTTGAAGGTCGCATGTCAGGCAGTACTC...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACGTGGCTTGTGGTGGTTaGTGTCTCCTCAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYVACGG*CLLRGL
Trigger: GAGTCCTCTGAGGAGACACCAACCACCACAAGCCAC...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTGCATGCTGCCCAGATaGCCGCGTGTGTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFCMLPR*PRVSLL
Trigger: AAGGAGTGACACACGCGGCCATCTGGGCAGCATGCA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ATTCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCATCACATGGGACAGGCTaGGCTCTACCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: IQSFVPRSNGHCSLRLLSSHGTG*ALPAGE
Trigger: TTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGA...TGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp GCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: AALVSASQTVWGDGPVSLWLVSR*VRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA...GAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACAGAGATCCTGTCTGCTaGGGCGGCGGCAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNRDPVC*GGGSAQ
Trigger: CTGAGCGCTGCCGCCGCCGCAGCAGACAGGATCTCT...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392328.6
CDS-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCCAGGGGTTCAAGGCTaGAGTGAGCTAGGATCACGC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLPGVQG*SELGSR
Trigger: GCGTGATCCTAGCTCACTGCAGCCTTGAACCCCTGG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392328.6
CDS-3UTR GCA 90 bp AGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTCATTCAGTCATTTGTaGCCCGCAGCAATGGACACT +
Preference number: 4 (lower is better)
Translates to: SHLCPAAMDTVVCGSCQCSFSHL*PAAMDT
Trigger: AGTGTCCATTGCTGCGGGGCACAAATGACTGAATGA...GCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTGGAACCGGAACTGAGTaGCAACGATCAAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSGTGTE*QRSRPW
Trigger: CCATGGCCTTGATCGTTGCCACTCAGTTCCGGTTCC...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTCACATGGGACAGGCTaGGCTCTACCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFSHGTG*ALPAGE
Trigger: TTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTTAAGTCCCAAAAGTTaGAGGCCTGCGAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYLSPKS*RPASGL
Trigger: CAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCACATGACTCAGGACTaGACAGACCCCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSHMTQD*TDPKEG
Trigger: ACCCTCTTTGGGGTCTGTTCAGTCCTGAGTCATGTG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTGCGTGTGTCACTCCTTaGAGAACTTCCATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSACVTP*RTSMGR
Trigger: TCTCCCCATGGAAGTTCTTCAAGGAGTGACACACGC...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp GACCTTCAAGTTGACTTCATTCAGTCATTTGTGCCCCGCAGCAATGGACACTGTCTAGATGGGTCAGAGTaGGTCTCACATGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: DLQVDFIQSFVPRSNGHCLDGSE*VSHGTG
Trigger: GCCTGTCCCATGTGAGACTCACTCTGACCCATCTAG...ACAGTGTCCATTGCTGCGGGGCACAAATGACTGAATGAAGTCAACTTGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR TCA 90 bp CTGACATGCGACCTTCAAGTTGACTTCATTCAGTCATTTGTGCCCCGCAGCAATATTCCATGCAGGGTGTaGGATGAGCAGGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTCDLQVDFIQSFVPRSNIPCRV*DEQDAL
Trigger: GAGGGCATCCTGCTCATCTCACACCCTGCATGGAAT...ATTGCTGCGGGGCACAAATGACTGAATGAAGTCAACTTGAAGGTCGCATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGATTCCATGCAGGGTGTaGGATGAGCAGGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLIPCRV*DEQDAL
Trigger: GAGGGCATCCTGCTCATCTCACACCCTGCATGGAAT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTCTCAGGGGGAACGGCTaGACTGAGGTAAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFLRGNG*TEVRNA
Trigger: TGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAG...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTCACCAAGCAGGCCATaGCAATTCCTCGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFSPSRP*QFLGRL
Trigger: CAACCTTCCGAGGAATTGGCATGGCCTGCTTGGTGA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCTTGGTTACGCTTCCTaGGGAGACAGGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLLGYAS*GDRGCC
Trigger: ACAGCAACCCCTGTCTCCCCAGGAAGCGTAACCAAG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCTGACTCCCCAGGCTaGTTTGTTCACATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFADSPG*FVHIFL
Trigger: CAGGAAGATGTGAACAAACCAGCCTGGGGAGTCAGC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTTTCCCTATTCTCATTaGTCCCCTGTAAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPFPYSH*SPVKAV
Trigger: TACAGCCTTTACAGGGGACCAATGAGAATAGGGAAA...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTGGGGTGAGCGGGGCTaGTCTGCGTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNWGERG*SASEML
Trigger: CAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACGAGGCATATCCTGGCTaGGGGGCCTCACCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNEAYPG*GASPCV
Trigger: GACACAGGGTGAGGCCCCCCAGCCAGGATATGCCTC...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCGGTGTCTGAGACATTaGGCCTTGTTTCCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYRCLRH*ALFPKG
Trigger: ACCTTTTGGAAACAAGGCTCAATGTCTCAGACACCG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGACCCCTTTCCATCGATaGGCACTTCGATGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLTPFHR*ALRCGC
Trigger: ACACCCACATCGAAGTGCTCATCGATGGAAAGGGGT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACGCCAGTAGAGAAAGGTaGACACGAAGCCATATCCAA +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYASRER*TRSHIQ
Trigger: TTGGATATGGCTTCGTGTTCACCTTTCTCTACTGGC...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTCCGGCCTGGGTAACTaGGAGAGATCCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTASGLGN*ERSCLL
Trigger: CAGCAGACAGGATCTCTCTCAGTTACCCAGGCCGGA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392328.6
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTACCAAGTCGATGGTTaGTATAGGAACGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYYQVDG*YRNGTG
Trigger: TCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCCGTCTGAGATGCTGCTaGGTCAGGGGATGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTARLRCC*VRGWLV
Trigger: AACCAGCCATCCCCTGACGCAGCAGCATCTCAGACG...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGGTCTGCGTCTGAGATaGTGCTGCGTCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTGLRLR*CCVRGW
Trigger: CCATCCCCTGACGCAGCAGCATCTCAGACGCAGACC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTGAGAGAGATCCTGTCTaGTGCGGCGGCGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFERDPV*CGGGSA
Trigger: AGCGCTGCCGCCGCCGCAGCAGACAGGATCTCTCTC...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392328.6
CDS-3UTR CCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGACTGGTGACTTGCATTaGTGGGGTGAGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLTGDLH*WGELLG
Trigger: GCCCAACAACTCACCCCACCAATGCAAGTCACCAGT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTGTAATTTCACCTGTCTaGGGCTGCAGAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSVISPV*GCRVGS
Trigger: TGAACCCACTCTGCAGCCCCAGACAGGTGAAATTAC...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAACACGCCTCCGATCATaGCACCACATCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVTRLRS*HHILFP
Trigger: TGGGAAGAGGATGTGGTGCCATGATCGGAGGCGTGT...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTCTGGGCTCAATGCGTaGCATGACATCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSSGLNA*HDIFCL
Trigger: CAGACAGAAGATGTCATGCCACGCATTGAGCCCAGA...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVRVSLT*DRLGST
Trigger: GGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCT...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYWLVSR*VRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCAAAGTAACGGTGTCTaGGACATTGAGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYQSNGV*DIEPCF
Trigger: GAAACAAGGCTCAATGTCTCAGACACCGTTACTTTG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGGAACGCCGAAGACGATaGAGACGATCTGGTAATTCC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLERRRR*RRSGNS
Trigger: GGAATTACCAGATCGTCTTCATCGTCTTCGGCGTTC...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGGCTCAATGCGTGGCATaGCATCTTCTGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLAQCVA*HLLSVA
Trigger: AGCAACAGACAGAAGATGTCATGCCACGCATTGAGC...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTACCCAGGGAGAAGAGCTaGCTCCCCAGGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILPREKS*LPRLVC
Trigger: ACAAACCAGCCTGGGGAGTCAGCTCTTCTCCCTGGG...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCCCTCACTTTACAATTaGTCCTGTCTAATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYPSLYN*SCLIRV
Trigger: GACCCTGATTAGACAGGATCAATTGTAAAGTGAGGG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAAGTCCACAAACCCATaGAGGTGTCAGCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLKSTNP*RCQLTR
Trigger: CCTTGTGAGCTGACACCTTCATGGGTTTGTGGACTT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACA +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLYSEPY*RPGQCT
Trigger: TGTACATTGGCCTGGCCTGCAATACGGCTCGCTATA...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACTCAGGGGGAACGGCTaGACTGAGGTAAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVLRGNG*TEVRNA
Trigger: TGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTTCCTCATCTGGCACTaGCAGCCACTGGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNFLIWH*QPLDQG
Trigger: GCCCTGATCCAGTGGCTGGCAGTGCCAGATGAGGAA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCTGCGTCTGAGATGCTaGTGCGTCAGGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHLRLRC*CVRGWL
Trigger: CAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAG...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAACTGCGTCTGAGATGCTaGTGCGTCAGGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTELRLRC*CVRGWL
Trigger: CAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAG...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGGGTGGGGTGAGTTGTTaGGCGAATCTTTGGTACACA +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLGGVSC*ANLWYT
Trigger: TGTGTACCAAAGATTCGCCCAACAACTCACCCCACC...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGGAACCGGAACTGAGTaGCAACGATCAAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAGTGTE*QRSRPW
Trigger: CCATGGCCTTGATCGTTGCCACTCAGTTCCGGTTCC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCACCTGCGAGTGGCTTGTaGTGGTTGGTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPPASGL*WLVSPQ
Trigger: CTGAGGAGACACCAACCACCACAAGCCACTCGCAGG...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCATGCATGCTGCCCAGATaGCCGCGTGTGTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPCMLPR*PRVSLL
Trigger: AAGGAGTGACACACGCGGCCATCTGGGCAGCATGCA...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGGCACTGCCAGCCACTaGATCAGGGCAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTGTASH*IRAKSS
Trigger: ACTGCTCTTTGCCCTGATCCAGTGGCTGGCAGTGCC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCTTAGTTTTCTTGGGTaGAAGTCTGGGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSLSFLG*KSGLNA
Trigger: CGCATTGAGCCCAGACTTCCACCCAAGAAAACTAAG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSWLVSR*VRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTACCVRG*LVSRWV
Trigger: GACCCATCTAGAAACCAGCCATCCCCTGACGCAGCA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTATTGGGCAGAACTATaGTGTCATGGAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSYWAEL*CHGEAL
Trigger: GAGGGCTTCTCCATGACACCATAGTTCTGCCCAATA...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAGCTCAATGCGTGGCATaGCATCTTCTGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVAQCVA*HLLSVA
Trigger: AGCAACAGACAGAAGATGTCATGCCACGCATTGAGC...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTCCCAGGGAGAAGAGCTaGCTCCCCAGGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSPREKS*LPRLVC
Trigger: ACAAACCAGCCTGGGGAGTCAGCTCTTCTCCCTGGG...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGGGCTGGTCTGCGTCTaGGATGCTGCTGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLGLVCV*DAAASG
Trigger: CCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAATTCCATGCAGGGTGTaGGATGAGCAGGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPIPCRV*DEQDAL
Trigger: GAGGGCATCCTGCTCATCTCACACCCTGCATGGAAT...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTAGCAACTTTATCATCTaGCATGGCTTACCACCACCA +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFSNFII*HGLPPP
Trigger: TGGTGGTGGTAAGCCATGGCAGATGATAAAGTTGCT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTAGACAGGGGTTGCTGTaGTTGAGTTCAAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFRQGLL*LSSKSS
Trigger: ACTTGACTTTGAACTCAAGCACAGCAACCCCTGTCT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAAGCACTGAGCCATACTaGACGCTGCAGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPSTEPY*TLQSSL
Trigger: CAAGCTGCTCTGCAGCGTGCAGTATGGCTCAGTGCT...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAGAAGGCCCTGCAGGATaGCCTGAGCAGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEEGPAG*PEQMSS
Trigger: TGAGGACATCTGCTCAGGGCATCCTGCAGGGCCTTC...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACAATTCCTCGGAAGGTTaGAGCAGCCCCAAAATAATT +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYNSSEG*SSPKII
Trigger: AATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATT...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATTCCTCATCTGGCACTaGCAGCCACTGGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILFLIWH*QPLDQG
Trigger: GCCCTGATCCAGTGGCTGGCAGTGCCAGATGAGGAA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATTCCTCATCTGGCACTaGCAGCCACTGGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEFLIWH*QPLDQG
Trigger: GCCCTGATCCAGTGGCTGGCAGTGCCAGATGAGGAA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTTGTCTCTTGTGAGTTaGATCATCTCTTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPLSLVS*IISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAA...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGGTCTGCGTCTGAGATaGTGCTGCGTCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFGLRLR*CCVRGW
Trigger: CCATCCCCTGACGCAGCAGCATCTCAGACGCAGACC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGTGGCAAGCTTTACGTaGGATCCACCCAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAVASFT*DPPSHC
Trigger: ACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCAC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTCAACATGTCAACTGTaGATTTCCAAAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYSTCQL*ISKTAG
Trigger: GCCTGCTGTTTTGGAAATGCACAGTTGACATGTTGA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACAAGGCTGGAAATGACTaGATTATCGATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYKAGND*IIDSAV
Trigger: GACAGCAGAATCGATAATGCAGTCATTTCCAGCCTT...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACCTTGGTTACGCTTCCTaGGGAGACAGGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNLGYAS*GDRGCC
Trigger: ACAGCAACCCCTGTCTCCCCAGGAAGCGTAACCAAG...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGTGGCTTGTGGTGGTTaGTGTCTCCTCAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPVACGG*CLLRGL
Trigger: GAGTCCTCTGAGGAGACACCAACCACCACAAGCCAC...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAACCTGCGAGTGGCTTGTaGTGGTTGGTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEPASGL*WLVSPQ
Trigger: CTGAGGAGACACCAACCACCACAAGCCACTCGCAGG...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTACAGAACCCTGATGTaGCCGATCAATTCAATAAGC +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYYRTLM*PINSIS
Trigger: GCTTATTGAATTGATCGGCCACATCAGGGTTCTGTA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATGCATGCTGCCCAGATaGCCGCGTGTGTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTECMLPR*PRVSLL
Trigger: AAGGAGTGACACACGCGGCCATCTGGGCAGCATGCA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGGCACTGCCAGCCACTaGATCAGGGCAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILGTASH*IRAKSS
Trigger: ACTGCTCTTTGCCCTGATCCAGTGGCTGGCAGTGCC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGCTGACTCCCCAGGCTaGTTTGTTCACATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAADSPG*FVHIFL
Trigger: CAGGAAGATGTGAACAAACCAGCCTGGGGAGTCAGC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTRVSLT*DRLGST
Trigger: GGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCT...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNRVSLT*DRLGST
Trigger: GGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCT...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACGGTGTCTGAGACATTaGGCCTTGTTTCCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVRCLRH*ALFPKG
Trigger: ACCTTTTGGAAACAAGGCTCAATGTCTCAGACACCG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGAACGCCGAAGACGATaGAGACGATCTGGTAATTCC +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAERRRR*RRSGNS
Trigger: GGAATTACCAGATCGTCTTCATCGTCTTCGGCGTTC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCTAGATGGGTCAGAGTaGGTCTCACATGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHLDGSE*VSHGTG
Trigger: GCCTGTCCCATGTGAGACTCACTCTGACCCATCTAG...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILMQGVR*AGCPQC
Trigger: ACACTGAGGGCATCCTGCTCATCTCACACCCTGCAT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTAGCTGTGTTTTATTGTaGAGCGAGACATCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFSCVLL*SETSKC
Trigger: ACACTTGGATGTCTCGCTTCACAATAAAACACAGCT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTCACAAGGCTGGAAATaGCTGCATTATCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLSQGWK*LHYRFC
Trigger: GCAGAATCGATAATGCAGTCATTTCCAGCCTTGTGA...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATGTAGTCGATCCCGATaGCCACAGACAGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILCSRSR*PQTASP
Trigger: TGGCGATGCTGTCTGTGGGCATCGGGATCGACTACA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACAGCACTGAGCCATACTaGACGCTGCAGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHSTEPY*TLQSSL
Trigger: CAAGCTGCTCTGCAGCGTGCAGTATGGCTCAGTGCT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACA +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAYSEPY*RPGQCT
Trigger: TGTACATTGGCCTGGCCTGCAATACGGCTCGCTATA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACGAGGTAAGAAATGCATaGTGCCCAGATGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHEVRNA*CPDGRV
Trigger: CACGCGGCCATCTGGGCAGCATGCATTTCTTACCTC...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGAGGTAAGAAATGCATaGTGCCCAGATGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILEVRNA*CPDGRV
Trigger: CACGCGGCCATCTGGGCAGCATGCATTTCTTACCTC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGAAGGCCCTGCAGGATaGCCTGAGCAGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFEGPAG*PEQMSS
Trigger: TGAGGACATCTGCTCAGGGCATCCTGCAGGGCCTTC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATACCAAGTCGATGGTTaGTATAGGAACGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVYQVDG*YRNGTG
Trigger: TCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTATATTTAGAAGCATATaGAGTGCTGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSIFRSI*SAVLLQ
Trigger: CTGGAGGAGCACAGCACTGCATATGCTTCTAAATAT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTATTCGAAGGTGGTTCTaGTTCCCTGGAAATACCATT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFIRRWF*FPGNTI
Trigger: AATGGTATTTCCAGGGAACCAGAACCACCTTCGAAT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATTGAAGGCCTGCGAGTaGCTTGTGGTGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTELKACE*LVVVGV
Trigger: GACACCAACCACCACAAGCCACTCGCAGGCCTTCAA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACTTGAAGAACTTCCATaGGGAGAACAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVLEELP*GEQSRH
Trigger: ATGCCTGGACTGTTCTCCCCATGGAAGTTCTTCAAG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACACACGCCTCCGATCATaGCACCACATCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHTRLRS*HHILFP
Trigger: TGGGAAGAGGATGTGGTGCCATGATCGGAGGCGTGT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGTCTTCTTCCTCATCTaGCACTGCCAGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTVFFLI*HCQPLD
Trigger: ATCCAGTGGCTGGCAGTGCCAGATGAGGAAGAAGAC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGTCTTCTTCCTCATCTaGCACTGCCAGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPVFFLI*HCQPLD
Trigger: ATCCAGTGGCTGGCAGTGCCAGATGAGGAAGAAGAC...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACTTAGTTTTCTTGGGTaGAAGTCTGGGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVLSFLG*KSGLNA
Trigger: CGCATTGAGCCCAGACTTCCACCCAAGAAAACTAAG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTTTCCCTATTCTCATTaGTCCCCTGTAAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFFPYSH*SPVKAV
Trigger: TACAGCCTTTACAGGGGACCAATGAGAATAGGGAAA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATGGCTGGTTTCTAGATaGGTCAGAGTGAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVWLVSR*VRVSLT
Trigger: TGTGAGACTCACTCTGACCCATCTAGAAACCAGCCA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHCCVRG*LVSRWV
Trigger: GACCCATCTAGAAACCAGCCATCCCCTGACGCAGCA...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCCCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCATCCTTCCCATTCATaGTTTCCTATTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYHPSHS*FPIYHL
Trigger: AAGGTGGTAAATAGGAAACCATGAATGGGAAGGATG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACTTTCCCTATTCTCATTaGTCCCCTTTCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYFPYSH*SPFISF
Trigger: AAAGGAGATGAAAGGGGACCAATGAGAATAGGGAAA...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR TCA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTATCCAATGCCCAGGTTaGATAAAACCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSIQCPG*IKPNTK
Trigger: TTTTGTGTTGGGTTTTATTCAACCTGGGCATTGGAT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACTCACGCATTTTTGGTaGTATGGTGAGGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVLTHFW*YGEERG
Trigger: ACCTCTTTCCTCACCATATCACCAAAAATGCGTGAG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGATCATAAACAAGCATaGCTTGGTCAGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFDHKQA*LGQKVK
Trigger: CTTTACCTTCTGACCAAGTCATGCTTGTTTATGATC...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGCGTGTGTCACTCCTTaGAGAACTTCCATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILACVTP*RTSMGR
Trigger: TCTCCCCATGGAAGTTCTTCAAGGAGTGACACACGC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAGCGTGTGTCACTCCTTaGAGAACTTCCATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEACVTP*RTSMGR
Trigger: TCTCCCCATGGAAGTTCTTCAAGGAGTGACACACGC...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTGGGGAACGGCTGCACTaGGGTAAGAAATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFGERLH*GKKCML
Trigger: CAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCC...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGGGGAACGGCTGCACTaGGGTAAGAAATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFGERLH*GKKCML
Trigger: CAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFMQGVR*AGCPQC
Trigger: ACACTGAGGGCATCCTGCTCATCTCACACCCTGCAT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCATGCAGGGTGTGAGATaGGCAGGATGCCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFMQGVR*AGCPQC
Trigger: ACACTGAGGGCATCCTGCTCATCTCACACCCTGCAT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAACCAAGCAAAGAACTaGAAGTCCTCATTGAACTCC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLNQAKN*KSSLNS
Trigger: GGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTGQRVR*VAHFDC
Trigger: ACAGTCGAAATGAGCAACTCACCTTACCCTCTGACC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGT +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNGQRVR*VAHFDC
Trigger: ACAGTCGAAATGAGCAACTCACCTTACCCTCTGACC...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAGCTGTGTTTTATTGTaGAGCGAGACATCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLSCVLL*SETSKC
Trigger: ACACTTGGATGTCTCGCTTCACAATAAAACACAGCT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTCACCTGTCTGGGGCTaGAGAGTGGGTTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFSPVWG*RVGSLF
Trigger: GAACAGTGAACCCACTCTGCAGCCCCAGACAGGTGA...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGTAAGAAATGCATGCTaGCCAGATGGCCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILVRNAC*PDGRVC
Trigger: ACACACGCGGCCATCTGGGCAGCATGCATTTCTTAC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGAGGTAAGAAATGCATaGTGCCCAGATGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFEVRNA*CPDGRV
Trigger: CACGCGGCCATCTGGGCAGCATGCATTTCTTACCTC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTACTCAGGGGGAACGGCTaGACTGAGGTAAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILLRGNG*TEVRNA
Trigger: TGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAG...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGACATCTTCTGTCTGTTaGTGTACCAAGTCGATGGTT +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLTSSVC*CTKSMV
Trigger: AACCATCGACTTGGTACAGCAACAGACAGAAGATGT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTATAGTTGCTACTTATTaGCATCCTTCCCATTCATGG +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFIVATY*HPSHSW
Trigger: CCATGAATGGGAAGGATGGCAATAAGTAGCAACTAT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACGTGGCAAGCTTTACGTaGGATCCACCCAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHVASFT*DPPSHC
Trigger: ACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCAC...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGGTGGGGTGAGTTGTTaGGCGAATCTTTGGTACACA +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTGGVSC*ANLWYT
Trigger: TGTGTACCAAAGATTCGCCCAACAACTCACCCCACC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACACTGGTGACTTGCATTaGTGGGGTGAGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHTGDLH*WGELLG
Trigger: GCCCAACAACTCACCCCACCAATGCAAGTCACCAGT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTGAAGGCCTGCGAGTaGCTTGTGGTGGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSLKACE*LVVVGV
Trigger: GACACCAACCACCACAAGCCACTCGCAGGCCTTCAA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTACACGCCTCCGATCATaGCACCACATCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFTRLRS*HHILFP
Trigger: TGGGAAGAGGATGTGGTGCCATGATCGGAGGCGTGT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGTCTTCTTCCTCATCTaGCACTGCCAGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILVFFLI*HCQPLD
Trigger: ATCCAGTGGCTGGCAGTGCCAGATGAGGAAGAAGAC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCTCTGGGCTCAATGCGTaGCATGACATCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTSGLNA*HDIFCL
Trigger: CAGACAGAAGATGTCATGCCACGCATTGAGCCCAGA...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCCTTAGTTTTCTTGGGTaGAAGTCTGGGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTALSFLG*KSGLNA
Trigger: CGCATTGAGCCCAGACTTCCACCCAAGAAAACTAAG...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGCGTCAGGGGATGGCTaGTTTCTAGATGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFASGDG*FLDGSE
Trigger: CTCTGACCCATCTAGAAACCAGCCATCCCCTGACGC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTCATCCTTCCCATTCATaGTTTCCTATTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFHPSHS*FPIYHL
Trigger: AAGGTGGTAAATAGGAAACCATGAATGGGAAGGATG...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAGAACTATGGTGTCATaGAGAAGCCCTCACTTTACA +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLRTMVS*RSPHFT
Trigger: TGTAAAGTGAGGGCTTCTCCATGACACCATAGTTCT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTATTGGGCAGAACTATaGTGTCATGGAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAYWAEL*CHGEAL
Trigger: GAGGGCTTCTCCATGACACCATAGTTCTGCCCAATA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGGGGTTGCTGTGCTTaGGTTCAAAGTCAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTRGCCA*VQSQVH
Trigger: ATGGACTTGACTTTGAACTCAAGCACAGCAACCCCT...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCACCCCTTTCCATCGATaGGCACTTCGATGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFTPFHR*ALRCGC
Trigger: ACACCCACATCGAAGTGCTCATCGATGGAAAGGGGT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCCACATGACTCAGGACTaGACAGACCCCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFHMTQD*TDPKEG
Trigger: ACCCTCTTTGGGGTCTGTTCAGTCCTGAGTCATGTG...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGCTCAATGCGTGGCATaGCATCTTCTGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILAQCVA*HLLSVA
Trigger: AGCAACAGACAGAAGATGTCATGCCACGCATTGAGC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTACAGTACAAGTTTTTaGCTTCCTACAGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFYSTSF*LPTVSF
Trigger: GAAACTGACTGTAGGAAGTCAAAAACTTGTACTGTA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAAAGTCCACAAACCCATaGAGGTGTCAGCTCACAAGG +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEKSTNP*RCQLTR
Trigger: CCTTGTGAGCTGACACCTTCATGGGTTTGTGGACTT...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CTGACATGCGACCTTCAAGTTGACTTCATTCAGTCATTTGTGCCCCGCAGCAATATGCGACCTTCAAGTTaGCTTCATTCAGTCATTTGT +
Preference number: 4 (lower is better)
Translates to: LTCDLQVDFIQSFVPRSNMRPSS*LHSVIC
Trigger: ACAAATGACTGAATGAAGTCAACTTGAAGGTCGCAT...ATTGCTGCGGGGCACAAATGACTGAATGAAGTCAACTTGAAGGTCGCATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATTGTTCCTTTCCACCTaGGGGATCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTELFLST*GISTSF
Trigger: GAAAGAGGTGGAGATCCCGCAGGTGGAAAGGAACAA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGTAAGAAATGCATGCTaGCCAGATGGCCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFVRNAC*PDGRVC
Trigger: ACACACGCGGCCATCTGGGCAGCATGCATTTCTTAC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTCACCAAGCAGGCCATaGCAATTCCTCGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFSPSRP*QFLGRL
Trigger: CAACCTTCCGAGGAATTGGCATGGCCTGCTTGGTGA...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTACCAAGTCGATGGTTaGTATAGGAACGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNYQVDG*YRNGTG
Trigger: TCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACATTTCTTATCCCAAATaGAGTATTGGGCAGAACTAT +
Preference number: 4 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYISYPK*SIGQNY
Trigger: ATAGTTCTGCCCAATACTGCATTTGGGATAAGAAAT...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCTGCATTATCGATTCTaGTGTCACAGTAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLLHYRF*CHSKCS
Trigger: GGAACATTTACTGTGACAGCAGAATCGATAATGCAG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAACTAGTAGTCCACTCTaGCTTGGAGACATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILTSSPL*LGDIPS
Trigger: GCTGGGAATGTCTCCAAGCCAGAGTGGACTACTAGT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGTAATTTCACCTGTCTaGGGCTGCAGAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILVISPV*GCRVGS
Trigger: TGAACCCACTCTGCAGCCCCAGACAGGTGAAATTAC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTCAGTGGTTGTCTCCTTaGTTACGCTTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSQWLSP*LRFLGR
Trigger: TCTCCCCAGGAAGCGTAACCAAGGAGACAACCACTG...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCAGTGGTTGTCTCCTTaGTTACGCTTCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFQWLSP*LRFLGR
Trigger: TCTCCCCAGGAAGCGTAACCAAGGAGACAACCACTG...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGCGAGTGGCTTGTGGTaGTTGGTGTCTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHASGLW*LVSPQR
Trigger: CCTCTGAGGAGACACCAACCACCACAAGCCACTCGC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATACAGAACCCTGATGTaGCCGATCAATTCAATAAGC +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVYRTLM*PINSIS
Trigger: GCTTATTGAATTGATCGGCCACATCAGGGTTCTGTA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGGCACTGCCAGCCACTaGATCAGGGCAAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHGTASH*IRAKSS
Trigger: ACTGCTCTTTGCCCTGATCCAGTGGCTGGCAGTGCC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCCTCACCCTGTGTCCTaGCTGAGGAGCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHPHPVS*LRSLIP
Trigger: TGGAATCAGGCTCCTCAGCCAGGACACAGGGTGAGG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCAACTCTTACTGCACTaGCAGAGAAATTCTATCATC +
Preference number: 4 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLQLLLH*QRNSII
Trigger: GATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAAGGGGTTGCTGTGCTTaGGTTCAAAGTCAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILRGCCA*VQSQVH
Trigger: ATGGACTTGACTTTGAACTCAAGCACAGCAACCCCT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTTTAAGTCCCAAAAGTTaGAGGCCTGCGAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFLSPKS*RPASGL
Trigger: CAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAA...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATAGCCACAAACAGCACTaGGCCATACTGCACGCTGCA +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHSHKQH*AILHAA
Trigger: TGCAGCGTGCAGTATGGCTCAGTGCTGTTTGTGGCT...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTGGTCAGAGGGTAAGGTaGGTTGCTCATTTCGACTGT +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSGQRVR*VAHFDC
Trigger: ACAGTCGAAATGAGCAACTCACCTTACCCTCTGACC...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCACCCTCACTTTACAATTaGTCCTGTCTAATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPPSLYN*SCLIRV
Trigger: GACCCTGATTAGACAGGATCAATTGTAAAGTGAGGG...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCCCCTCACTTTACAATTaGTCCTGTCTAATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTPSLYN*SCLIRV
Trigger: GACCCTGATTAGACAGGATCAATTGTAAAGTGAGGG...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACAGCAACTTTATCATCTaGCATGGCTTACCACCACCA +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNSNFII*HGLPPP
Trigger: TGGTGGTGGTAAGCCATGGCAGATGATAAAGTTGCT...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTTATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACA +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFYSEPY*RPGQCT
Trigger: TGTACATTGGCCTGGCCTGCAATACGGCTCGCTATA...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGCATATGCAGTGCTGTaGTCCTCCAGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLAYAVL*SSRGGI
Trigger: TATGCCTCCCCTGGAGGAGCACAGCACTGCATATGC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTGCAGTTGTAACGTTTaGAGTTGCATACATTACATT +
Preference number: 4 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFCSCNV*SCIHYI
Trigger: AATGTAATGTATGCAACTGCAAACGTTACAACTGCA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTCAACATGTCAACTGTaGATTTCCAAAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTASTCQL*ISKTAG
Trigger: GCCTGCTGTTTTGGAAATGCACAGTTGACATGTTGA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATGTTTTCCCAGATACTaGAGTGTGACCGTGTCTACG +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILCFPRY*SVTVST
Trigger: CGTAGACACGGTCACACTCCAGTATCTGGGAAAACA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTACTTGAAGAACTTCCATaGGGAGAACAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILLEELP*GEQSRH
Trigger: ATGCCTGGACTGTTCTCCCCATGGAAGTTCTTCAAG...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTGCTGCGTCAGGGGATaGCTGGTTTCTAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHCCVRG*LVSRWV
Trigger: GACCCATCTAGAAACCAGCCATCCCCTGACGCAGCA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCAGAACTATGGTGTCATaGAGAAGCCCTCACTTTACA +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTARTMVS*RSPHFT
Trigger: TGTAAAGTGAGGGCTTCTCCATGACACCATAGTTCT...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTACACTGCAGAATTCAATaGAGTAACGAATACCTACTA +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVHCRIQ*SNEYLL
Trigger: TAGTAGGTATTCGTTACTTCATTGAATTCTGCAGTG...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAAAGTAACGGTGTCTaGGACATTGAGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHQSNGV*DIEPCF
Trigger: GAAACAAGGCTCAATGTCTCAGACACCGTTACTTTG...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGCCAGTAGAGAAAGGTaGACACGAAGCCATATCCAA +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFASRER*TRSHIQ
Trigger: TTGGATATGGCTTCGTGTTCACCTTTCTCTACTGGC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACACATGACTCAGGACTaGACAGACCCCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLHMTQD*TDPKEG
Trigger: ACCCTCTTTGGGGTCTGTTCAGTCCTGAGTCATGTG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAGTTGGTTGGTTGATTTaGAATAATCGCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVVGWLI*NNRLFL
Trigger: CAGAAACAAGCGATTATTTCAAATCAACCAACCAAC...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTAACTGAGTTGGTTGGTTaGTTTGAAATAATCGCTTGT +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVTELVG*FEIIAC
Trigger: ACAAGCGATTATTTCAAATCAACCAACCAACTCAGT...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGTAAGAAATGCATGCTaGCCAGATGGCCGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHVRNAC*PDGRVC
Trigger: ACACACGCGGCCATCTGGGCAGCATGCATTTCTTAC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCACATCTTCTGTCTGTTaGTGTACCAAGTCGATGGTT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTTSSVC*CTKSMV
Trigger: AACCATCGACTTGGTACAGCAACAGACAGAAGATGT...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCATAGTTGCTACTTATTaGCATCCTTCCCATTCATGG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAIVATY*HPSHSW
Trigger: CCATGAATGGGAAGGATGGCAATAAGTAGCAACTAT...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATGGAGAAGCCCTCACTTTACAATTGATCCTGTCTAATCAGGGTCAGAGGGTATGTAACGTTTGCAGTTaGATACATTACATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HGEALTLQLILSNQGQRVCNVCS*IHYIVQ
Trigger: CTGGACAATGTAATGTATGCAACTGCAAACGTTACA...TACCCTCTGACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGCTTCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGTGGCAAGCTTTACGTaGGATCCACCCAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLVASFT*DPPSHC
Trigger: ACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCAC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACGAGGGTAAGGTGAGTTaGTCATTTCGACTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNEGKVS*SFRLFF
Trigger: AAAGAACAGTCGAAATGAGCAACTCACCTTACCCTC...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGAGGGTAAGGTGAGTTaGTCATTTCGACTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTEGKVS*SFRLFF
Trigger: AAAGAACAGTCGAAATGAGCAACTCACCTTACCCTC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTCAACATGTCAACTGTaGATTTCCAAAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNSTCQL*ISKTAG
Trigger: GCCTGCTGTTTTGGAAATGCACAGTTGACATGTTGA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAATTCGAAGGTGGTTCTaGTTCCCTGGAAATACCATT +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPIRRWF*FPGNTI
Trigger: AATGGTATTTCCAGGGAACCAGAACCACCTTCGAAT...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTTCACTGTTCATGTTTaGAGCTGTTGGCAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAFTVHV*SCWQSN
Trigger: GTTACTTTGCCAACAGCTCCAAACATGAACAGTGAA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTGTTTTCCCAGATACTaGAGTGTGACCGTGTCTACG +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSCFPRY*SVTVST
Trigger: CGTAGACACGGTCACACTCCAGTATCTGGGAAAACA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGCTGACTCCCCAGGCTaGTTTGTTCACATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLADSPG*FVHIFL
Trigger: CAGGAAGATGTGAACAAACCAGCCTGGGGAGTCAGC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCTTTCCCTATTCTCATTaGTCCCCTGTAAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTFPYSH*SPVKAV
Trigger: TACAGCCTTTACAGGGGACCAATGAGAATAGGGAAA...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGAACTATGGTGTCATaGAGAAGCCCTCACTTTACA +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTRTMVS*RSPHFT
Trigger: TGTAAAGTGAGGGCTTCTCCATGACACCATAGTTCT...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTATTGGGCAGAACTATaGTGTCATGGAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSYWAEL*CHGEAL
Trigger: GAGGGCTTCTCCATGACACCATAGTTCTGCCCAATA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCTTGCATTGGTGGGGTaGGTTGTTGGGCGAATCTTT +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHLALVG*VVGRIF
Trigger: AAAGATTCGCCCAACAACTCACCCCACCAATGCAAG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGTTGGTTGGTTGATTTaGAATAATCGCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAVGWLI*NNRLFL
Trigger: CAGAAACAAGCGATTATTTCAAATCAACCAACCAAC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAAGCTGTGTTTTATTGTaGAGCGAGACATCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILSCVLL*SETSKC
Trigger: ACACTTGGATGTCTCGCTTCACAATAAAACACAGCT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTAGACAGGGGTTGCTGTaGTTGAGTTCAAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSRQGLL*LSSKSS
Trigger: ACTTGACTTTGAACTCAAGCACAGCAACCCCTGTCT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATTGTTCCTTTCCACCTaGGGGATCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLLFLST*GISTSF
Trigger: GAAAGAGGTGGAGATCCCGCAGGTGGAAAGGAACAA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACAATTCCTCGGAAGGTTaGAGCAGCCCCAAAATAATT +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHNSSEG*SSPKII
Trigger: AATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAAATTCCTCGGAAGGTTaGAGCAGCCCCAAAATAATT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILNSSEG*SSPKII
Trigger: AATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAATATTTAGAAGCATATaGAGTGCTGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEIFRSI*SAVLLQ
Trigger: CTGGAGGAGCACAGCACTGCATATGCTTCTAAATAT...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTAGCCATTGTTCTGGCTaGAGTTGTAACGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSSHCSG*SCNVCS
Trigger: ACTGCAAACGTTACAACTGCAGCCAGAACAATGGCT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAAAGGCTGGAAATGACTaGATTATCGATTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILKAGND*IIDSAV
Trigger: GACAGCAGAATCGATAATGCAGTCATTTCCAGCCTT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATGTTTCATTCGAAGGTaGTTCTGGTTCCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILCFIRR*FWFPGN
Trigger: ATTTCCAGGGAACCAGAACCACCTTCGAATGAAACA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTGTTGGGCGAATCTTTaGTACACATCTCAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSCWANL*YTSQGS
Trigger: GCTACCTTGAGATGTGTACCAAAGATTCGCCCAACA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCATTCACTGTTCATGTTTaGAGCTGTTGGCAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPFTVHV*SCWQSN
Trigger: GTTACTTTGCCAACAGCTCCAAACATGAACAGTGAA...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATCTGGGGCTGCAGAGTaGGTTCACTGTTCATGTTTG +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLSGAAE*VHCSCL
Trigger: CAAACATGAACAGTGAACCCACTCTGCAGCCCCAGA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTCTGGGGCTGCAGAGTaGGTTCACTGTTCATGTTTG +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHSGAAE*VHCSCL
Trigger: CAAACATGAACAGTGAACCCACTCTGCAGCCCCAGA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATCTGGGCTCAATGCGTaGCATGACATCTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLSGLNA*HDIFCL
Trigger: CAGACAGAAGATGTCATGCCACGCATTGAGCCCAGA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCCAACTCTTACTGCACTaGCAGAGAAATTCTATCATC +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTQLLLH*QRNSII
Trigger: GATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTG...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACAGCCCCAAAATAATTaGCTAACACGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLQPQNN*LTRLRS
Trigger: TGATCGGAGGCGTGTTAGTCAATTATTTTGGGGCTG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCAGCCCCAAAATAATTaGCTAACACGCCTCCGATCA +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHQPQNN*LTRLRS
Trigger: TGATCGGAGGCGTGTTAGTCAATTATTTTGGGGCTG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCAACCAAGCAAAGAACTaGAAGTCCTCATTGAACTCC +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFNQAKN*KSSLNS
Trigger: GGAGTTCAATGAGGACTTTCAGTTCTTTGCTTGGTT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAACTGAGTTGGTTGGTTaGTTTGAAATAATCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPTELVG*FEIIAC
Trigger: ACAAGCGATTATTTCAAATCAACCAACCAACTCAGT...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTACAGTACAAGTTTTTaGCTTCCTACAGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNYSTSF*LPTVSF
Trigger: GAAACTGACTGTAGGAAGTCAAAAACTTGTACTGTA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCACATCTTCTGTCTGTTaGTGTACCAAGTCGATGGTT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFTSSVC*CTKSMV
Trigger: AACCATCGACTTGGTACAGCAACAGACAGAAGATGT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTTTAATTTGGTAGAGTaGATAGACAAAGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNFNLVE*IDKGHP
Trigger: TGGGTGACCTTTGTCTATGCACTCTACCAAATTAAA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCATATTTAGAAGCATATaGAGTGCTGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFIFRSI*SAVLLQ
Trigger: CTGGAGGAGCACAGCACTGCATATGCTTCTAAATAT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAATAGTTGCTACTTATTaGCATCCTTCCCATTCATGG +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILIVATY*HPSHSW
Trigger: CCATGAATGGGAAGGATGGCAATAAGTAGCAACTAT...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTTCCTCTCTCTCCTGTaGTCATCCACAGCTATTATA +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFFLSLL*SSTAII
Trigger: TATAATAGCTGTGGATGAGCACAGGAGAGAGAGGAA...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTTTCCTCTCTCTCCTGTaGTCATCCACAGCTATTATA +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFFLSLL*SSTAII
Trigger: TATAATAGCTGTGGATGAGCACAGGAGAGAGAGGAA...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCATTTCTTATCCCAAATaGAGTATTGGGCAGAACTAT +
Preference number: 4 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAISYPK*SIGQNY
Trigger: ATAGTTCTGCCCAATACTGCATTTGGGATAAGAAAT...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTGTTTCATTCGAAGGTaGTTCTGGTTCCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFCFIRR*FWFPGN
Trigger: ATTTCCAGGGAACCAGAACCACCTTCGAATGAAACA...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACTTGAAGAACTTCCATaGGGAGAACAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLLEELP*GEQSRH
Trigger: ATGCCTGGACTGTTCTCCCCATGGAAGTTCTTCAAG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAACATCCTTCCCATTCATaGTTTCCTATTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEHPSHS*FPIYHL
Trigger: AAGGTGGTAAATAGGAAACCATGAATGGGAAGGATG...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCATCCAATGCCCAGGTTaGATAAAACCCAACACAAAA +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFIQCPG*IKPNTK
Trigger: TTTTGTGTTGGGTTTTATTCAACCTGGGCATTGGAT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCTCACGCATTTTTGGTaGTATGGTGAGGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHLTHFW*YGEERG
Trigger: ACCTCTTTCCTCACCATATCACCAAAAATGCGTGAG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTGATCATAAACAAGCATaGCTTGGTCAGAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFDHKQA*LGQKVK
Trigger: CTTTACCTTCTGACCAAGTCATGCTTGTTTATGATC...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATCACAAGGCTGGAAATaGCTGCATTATCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLSQGWK*LHYRFC
Trigger: GCAGAATCGATAATGCAGTCATTTCCAGCCTTGTGA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACACCATTAAAGGGATCTaGAAGCACATACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHTIKGI*KHILSL
Trigger: AAGAGAAAGTATGTGCTTGCAGATCCCTTTAATGGT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATTTAATTTGGTAGAGTaGATAGACAAAGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LLSVTAGFNSYCTGREILFNLVE*IDKGHP
Trigger: TGGGTGACCTTTGTCTATGCACTCTACCAAATTAAA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCTTGTCTCTTGTGAGTTaGATCATCTCTTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTLSLVS*IISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAA...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTATCTCCTTTCCTATGTaGAACTGTAAAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFISFPM*NCKGCI
Trigger: GATACAGCCTTTACAGTTGCACATAGGAAAGGAGAT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATGTTGGGCGAATCTTTaGTACACATCTCAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLCWANL*YTSQGS
Trigger: GCTACCTTGAGATGTGTACCAAAGATTCGCCCAACA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR TCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTGTTGGTTGGTTGATTTaGAATAATCGCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSVGWLI*NNRLFL
Trigger: CAGAAACAAGCGATTATTTCAAATCAACCAACCAAC...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCACTGAGTTGGTTGGTTaGTTTGAAATAATCGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFTELVG*FEIIAC
Trigger: ACAAGCGATTATTTCAAATCAACCAACCAACTCAGT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTAACAGGAATTCTTTCTaGCAACATTGTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSNRNSF*QHCLVF
Trigger: GAAGACAAGACAATGTTGGCAGAAAGAATTCCTGTT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTAACAGGAATTCTTTCTaGCAACATTGTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFNRNSF*QHCLVF
Trigger: GAAGACAAGACAATGTTGGCAGAAAGAATTCCTGTT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCAACAGGAATTCTTTCTaGCAACATTGTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFNRNSF*QHCLVF
Trigger: GAAGACAAGACAATGTTGGCAGAAAGAATTCCTGTT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAATTGGAAAGTATAGTTaGTACTTATTGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEIGKYS*YLLPSF
Trigger: GAAGGATGGCAATAAGTAGCAACTATACTTTCCAAT...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACATTGGAAAGTATAGTTaGTACTTATTGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHIGKYS*YLLPSF
Trigger: GAAGGATGGCAATAAGTAGCAACTATACTTTCCAAT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATTCCTCTCTCTCCTGTaGTCATCCACAGCTATTATA +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLFLSLL*SSTAII
Trigger: TATAATAGCTGTGGATGAGCACAGGAGAGAGAGGAA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGAGGGTAAGGTGAGTTaGTCATTTCGACTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLEGKVS*SFRLFF
Trigger: AAAGAACAGTCGAAATGAGCAACTCACCTTACCCTC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAATTTCTTATCCCAAATaGAGTATTGGGCAGAACTAT +
Preference number: 4 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEISYPK*SIGQNY
Trigger: ATAGTTCTGCCCAATACTGCATTTGGGATAAGAAAT...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTACAGAACCCTGATGTaGCCGATCAATTCAATAAGC +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHYRTLM*PINSIS
Trigger: GCTTATTGAATTGATCGGCCACATCAGGGTTCTGTA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTATTGGAAAGTATAGTTaGTACTTATTGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSIGKYS*YLLPSF
Trigger: GAAGGATGGCAATAAGTAGCAACTATACTTTCCAAT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACTGCATTATCGATTCTaGTGTCACAGTAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLLHYRF*CHSKCS
Trigger: GGAACATTTACTGTGACAGCAGAATCGATAATGCAG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACAACTCTTACTGCACTaGCAGAGAAATTCTATCATC +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLQLLLH*QRNSII
Trigger: GATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR TCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTACACTGCAGAATTCAATaGAGTAACGAATACCTACTA +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLHCRIQ*SNEYLL
Trigger: TAGTAGGTATTCGTTACTTCATTGAATTCTGCAGTG...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAACCATTAAAGGGATCTaGAAGCACATACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLTIKGI*KHILSL
Trigger: AAGAGAAAGTATGTGCTTGCAGATCCCTTTAATGGT...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTTTAATTTGGTAGAGTaGATAGACAAAGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHFNLVE*IDKGHP
Trigger: TGGGTGACCTTTGTCTATGCACTCTACCAAATTAAA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTGTAACGTTTGCAGTTaGATACATTACATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHCNVCS*IHYIVQ
Trigger: CTGGACAATGTAATGTATGCAACTGCAAACGTTACA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR CAA 72 bp CTTTCTTTAGTCATTGGAAAGTATAGTTGCTACTTATaGCCATCCTTCCCATTCATGGTTTCCTATTTACCA +
Preference number: 4 (lower is better)
Translates to: LSLVIGKYSCYL*PSFPFMVSYLP
Trigger: TGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACTATACTTTCCAATGACTAAAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
3UTR CAA 72 bp AATCAGAACTGTAAACACAAGATACAGTACAAGTTTTaGACTTCCTACAGTCAGTTTCACAAATCCACATAC +
Preference number: 4 (lower is better)
Translates to: NQNCKHKIQYKF*TSYSQFHKSTY
Trigger: GTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTGTACTGTATCTTGTGTTTACAGTTCTGATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATTTGTCTCTTGTGAGTTaGATCATCTCTTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHLSLVS*IISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAA...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR GCA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATGCAGTTGTAACGTTTaGAGTTGCATACATTACATT +
Preference number: 4 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLCSCNV*SCIHYI
Trigger: AATGTAATGTATGCAACTGCAAACGTTACAACTGCA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS TCA 90 bp GGATGCCCTGAGCAGATGTCCTCAGCTCAGGGGGAACGGCTGCACTaGGGTAAGAAATGCATGCTGCCCAGATGGCCGCGTGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: GCPEQMSSAQGERLH*GKKCMLPRWPRVSL
Trigger: GAGTGACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGGACATCTGCTCAGGGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 90 bp CTGCAGGATGCCCTGAGCAGATGTCCTCAGCTCAGGGGGAACGGCTaGACTGAGGTAAGAAATGCATGCTGCCCAGATGGCCGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: LQDALSRCPQLRGNG*TEVRNACCPDGRVC
Trigger: ACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGGACATCTGCTCAGGGCATCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 90 bp CCTCAGCTCAGGGGGAACGGCTGCACTGAGGTAAGAAATGCATGCTaGCCAGATGGCCGCGTGTGTCACTCCTTGAAGAACTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: PQLRGNGCTEVRNAC*PDGRVCHSLKNFHG
Trigger: CCCATGGAAGTTCTTCAAGGAGTGACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 90 bp TGTCCTCAGCTCAGGGGGAACGGCTGCACTGAGGTAAGAAATGCATaGTGCCCAGATGGCCGCGTGTGTCACTCCTTGAAGAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: CPQLRGNGCTEVRNA*CPDGRVCHSLKNFH
Trigger: ATGGAAGTTCTTCAAGGAGTGACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS-3UTR CAA 90 bp GTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCTTCTCAGATGTAGTCTGCGGCTCTaGTCAGTGCTTCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: VPRSNGHCSLRLLSVLLRCSLRL*SVLLRL
Trigger: CAGTCTGAGAAGCACTGACAAGAGCCGCAGACTACA...TCTGAGAAGCACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS GCA 90 bp GGTGGAAGTCTGGGCTCAATGCGTGGCATGACATCTTCTGTCTGTTaGTGTACCAAGTCGATGGTTGCTATAGGAACGGGACTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GGSLGSMRGMTSSVC*CTKSMVAIGTGLEG
Trigger: TCCCTCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAGACTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CCA 90 bp GTCAGGGGATGGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACATaGGACAGGCTGGGCTCTACCAGCAGGAGAATTTTCCCTATTCTC +
Preference number: 5 (lower is better)
Translates to: VRGWLVSRWVRVSLT*DRLGSTSRRIFPIL
Trigger: GAGAATAGGGAAAATTCTCCTGCTGGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000412482.1
ENST00000434582.5
CDS-3UTR CAA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCTGGGGAGACAGGGGTaGCTGTGCTTGAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYLGRQG*LCLSSK
Trigger: CTTTGAACTCAAGCACAGCAACCCCTGTCTCCCCAG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CCA 90 bp CTGCAGAGCAGCTTGATTAAGTCCCAAAAGTTGAAGGCCTGCGAGTaGCTTGTGGTGGTTGGTGTCTCCTCAGAGGACTCTGTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: LQSSLIKSQKLKACE*LVVVGVSSEDSVEL
Trigger: CAACTCTACAGAGTCCTCTGAGGAGACACCAACCACCACAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTACAGTGGTTGTCTCCTaGGTTACGCTTCCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSTVVVS*VTLPGE
Trigger: CTCCCCAGGAAGCGTAACCAAGGAGACAACCACTGT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTGAGGACTCTGTAGAGTaGTTCCTTTCCACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSEDSVE*FLSTCG
Trigger: CCCGCAGGTGGAAAGGAACAACTCTACAGAGTCCTC...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATC +
Preference number: 5 (lower is better)
Translates to: RLLSVLLRLSGVMDQFPSISEAR*SLVSCI
Trigger: GATGCAACTCACAAGAGACAACCGTGCTTCTGAGAT...AGAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CAA 90 bp GCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCTCTTTTCCCTATTCTCATaGGTCCCCTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: AALVSASQTVWGDGPVSLFSLFS*VPCKGC
Trigger: ACAGCCTTTACAGGGGACCAATGAGAATAGGGAAAA...GAGGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CAA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTTGGTGGGGTGAGTTGTaGGGCGAATCTTTGGTACAC +
Preference number: 5 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFWWGEL*GESLVH
Trigger: GTGTACCAAAGATTCGCCCAACAACTCACCCCACCA...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACCATTGGTGGGGTGAGTaGTTGGGCGAATCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYHWWGE*LGESLV
Trigger: TACCAAAGATTCGCCCAACAACTCACCCCACCAATG...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGAGTGGCTTGTGGTGGTaGGTGTCTCCTCAGAGGACT +
Preference number: 5 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLSGLWW*VSPQRT
Trigger: AGTCCTCTGAGGAGACACCAACCACCACAAGCCACT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 90 bp GCGTGGCATGACATCTTCTGTCTGTTGCTGTACCAAGTCGATGGTTaGTATAGGAACGGGACTGGAGGGAACAGGAATTCTTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: AWHDIFCLLLYQVDG*YRNGTGGNRNSFCQ
Trigger: TTGGCAGAAAGAATTCCTGTTCCCTCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CCA 90 bp TTCCTGGTGCTTAGTTTTCTTGGGTGGAAGTCTGGGCTCAATGCGTaGCATGACATCTTCTGTCTGTTGCTGTACCAAGTCGATGGTTGC +
Preference number: 5 (lower is better)
Translates to: FLVLSFLGWKSGLNA*HDIFCLLLYQVDGC
Trigger: GCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAGACTTCCACCCAAGAAAACTAAGCACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS-3UTR CAA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTCATTGGTGGGGTGAGTaGTTGGGCGAATCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSHWWGE*LGESLV
Trigger: TACCAAAGATTCGCCCAACAACTCACCCCACCAATG...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp GCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTGCAGTTGCATACGACATCTTCTGTCTGTaGCTGTACCAAGTCGATGGT +
Preference number: 5 (lower is better)
Translates to: AIHPAIVLAAVVTFAVAYDIFCL*LYQVDG
Trigger: ACCATCGACTTGGTACAGCAACAGACAGAAGATGTC...GTATGCAACTGCAAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGCGGCTCTTGTCAGTGCATGCGACCTTCAAGTaGACTTCATTCAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: QSFVPRSNGHCSLRLLSVHATFK*TSFSHL
Trigger: CAAATGACTGAATGAAGTCAACTTGAAGGTCGCATG...CACTGACAAGAGCCGCAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS GCA 90 bp TATCCAAAACCCATGAACCAAGCCACAAACAGCACTGAGCCATACTaGACGCTGCAGAGCAGCTTGATTAAGTCCCAAAAGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: YPKPMNQATNSTEPY*TLQSSLIKSQKLKA
Trigger: GGCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTGCAGCGTGCAGTATGGCTCAGTGCTGTTTGTGGCTTGGTTCATGGGTTTTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 90 bp ACGGTTGTCTCTTGTGAGTTGCATCATCTCTTTAATTTGGTAGAGTaGATAGACAAAGGTCACCCAGGGAGAAGAGCTGACTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TVVSCELHHLFNLVE*IDKGHPGRRADSPG
Trigger: GCCTGGGGAGTCAGCTCTTCTCCCTGGGTGACCTTTGTCTATGCACTCTACCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS-3UTR CAA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGCAGGGGTTGCTGTGCTaGAGTTCAAAGTCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLQGLLC*SSKSSP
Trigger: TGGACTTGACTTTGAACTCAAGCACAGCAACCCCTG...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGAGGACTCTGTAGAGTaGTTCCTTTCCACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAEDSVE*FLSTCG
Trigger: CCCGCAGGTGGAAAGGAACAACTCTACAGAGTCCTC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTTGTAACGTTTATTAAGTCCCAAAAGTaGAAGGCCTGCGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: QALRAIHPAIVLAAVVTFIKSQK*KACEWL
Trigger: AAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAAT...AAACGTTACAACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCCGCGTGTGTCACTCCTaGAAGAACTTCCATGGGGAG +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTARVCHS*KNFHGE
Trigger: CTCCCCATGGAAGTTCTTCAAGGAGTGACACACGCG...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CTGCGGCTCTTGTCAGTGCTTCTCAGACTGTCTGGGGTGATGGACCAGTTTCCCGTTGTCTCTTGTGAGTaGCATCATCTCTTTAATTTG +
Preference number: 5 (lower is better)
Translates to: LRLLSVLLRLSGVMDQFPVVSCE*HHLFNL
Trigger: CAAATTAAAGAGATGATGCAACTCACAAGAGACAAC...GGGAAACTGGTCCATCACCCCAGACAGTCTGAGAAGCACTGACAAGAGCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS-3UTR CAA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATC +
Preference number: 5 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSISEAR*SLVSCI
Trigger: GATGCAACTCACAAGAGACAACCGTGCTTCTGAGAT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CAAGTTGACTTCATTCAGTCATTTGTGCCCCGCAGCAATGGACACTGTAGTCTGACTTCATTCAGTCATTaGTGCCCCGCAGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: QVDFIQSFVPRSNGHCSLTSFSH*CPAAMD
Trigger: GTCCATTGCTGCGGGGCACAAATGACTGAATGAAGT...CAGACTACAGTGTCCATTGCTGCGGGGCACAAATGACTGAATGAAGTCAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412482.1
CDS TCA 90 bp TGTCTCCTTGGTTACGCTTCCTGGGGAGACAGGGGTTGCTGTGCTTaGGTTCAAAGTCAAGTCCATCATACGGTTAGTAATTTCACCTGT +
Preference number: 5 (lower is better)
Translates to: CLLGYASWGDRGCCA*VQSQVHHTVSNFTC
Trigger: ACAGGTGAAATTACTAACCGTATGATGGACTTGACTTTGAACTCAAGCACAGCAACCCCTGTCTCCCCAGGAAGCGTAACCAAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CCA 90 bp GAGTTCAAAGTCAAGTCCATCATACGGTTAGTAATTTCACCTGTCTaGGGCTGCAGAGTGGGTTCACTGTTCATGTTTGGAGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: EFKVKSIIRLVISPV*GCRVGSLFMFGAVG
Trigger: GCCAACAGCTCCAAACATGAACAGTGAACCCACTCTGCAGCCCCAGACAGGTGAAATTACTAACCGTATGATGGACTTGACTTTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGATTAAGTCCCAAAAGTaGAAGGCCTGCGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLIKSQK*KACEWL
Trigger: AAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAAT...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACCGCGTGTGTCACTCCTaGAAGAACTTCCATGGGGAG +
Preference number: 5 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNRVCHS*KNFHGE
Trigger: CTCCCCATGGAAGTTCTTCAAGGAGTGACACACGCG...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp ACCTCTGCTTTGATTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGGACATCTTCTGTCTGTaGCTGTACCAAGTCGATGGT +
Preference number: 5 (lower is better)
Translates to: TSALIFSGKLYVRSTQPLDIFCL*LYQVDG
Trigger: ACCATCGACTTGGTACAGCAACAGACAGAAGATGTC...CAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAATCAAAGCAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS GCA 90 bp GTTGGTGTCTCCTCAGAGGACTCTGTAGAGTTGTTCCTTTCCACCTaGGGGATCTCCACCTCTTTCCCTTTAGAATCATCGTTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: VGVSSEDSVELFLST*GISTSFPLESSFLK
Trigger: TTTCAAAAACGATGATTCTAAAGGGAAAGAGGTGGAGATCCCGCAGGTGGAAAGGAACAACTCTACAGAGTCCTCTGAGGAGACACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 90 bp AAAGTCAAGTCCATCATACGGTTAGTAATTTCACCTGTCTGGGGCTaGAGAGTGGGTTCACTGTTCATGTTTGGAGCTGTTGGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: KVKSIIRLVISPVWG*RVGSLFMFGAVGKV
Trigger: TACTTTGCCAACAGCTCCAAACATGAACAGTGAACCCACTCTGCAGCCCCAGACAGGTGAAATTACTAACCGTATGATGGACTTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CCA 90 bp AGGAATAGCAGATGTTTCTGTGGAGGAAGGTGTTTCATTCGAAGGTaGTTCTGGTTCCCTGGAAATACCATTAAAGGGATCTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RNSRCFCGGRCFIRR*FWFPGNTIKGICKH
Trigger: GTGCTTGCAGATCCCTTTAATGGTATTTCCAGGGAACCAGAACCACCTTCGAATGAAACACCTTCCTCCACAGAAACATCTGCTATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000432036.5
ENST00000445546.1
CDS-3UTR CAA 90 bp TTTTTAGTGGCAAGCTTTACGTGCGATCCACCCAGCCATTGTTCTGGCTGCAGTAATCCAATGCCCAGGTaGAATAAAACCCAACACAAA +
Preference number: 5 (lower is better)
Translates to: FLVASFTCDPPSHCSGCSNPMPR*NKTQHK
Trigger: TTTGTGTTGGGTTTTATTCAACCTGGGCATTGGATT...ACTGCAGCCAGAACAATGGCTGGGTGGATCGCACGTAAAGCTTGCCACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTCTGGGGAGACAGGGGTaGCTGTGCTTGAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSLGRQG*LCLSSK
Trigger: CTTTGAACTCAAGCACAGCAACCCCTGTCTCCCCAG...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCACAGTGGTTGTCTCCTaGGTTACGCTTCCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFTVVVS*VTLPGE
Trigger: CTCCCCAGGAAGCGTAACCAAGGAGACAACCACTGT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCAGTGGCTTGTGGTGGTaGGTGTCTCCTCAGAGGACT +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFSGLWW*VSPQRT
Trigger: AGTCCTCTGAGGAGACACCAACCACCACAAGCCACT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCCAATTCCTCGGAAGGTaGCAGCAGCCCCAAAATAAT +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAQFLGR*QQPQNN
Trigger: ATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATTG...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS TCA 90 bp GGGTTCACTGTTCATGTTTGGAGCTGTTGGCAAAGTAACGGTGTCTaGGACATTGAGCCTTGTTTCCAAAAGGTTTCTTTTCTCACGCAT +
Preference number: 5 (lower is better)
Translates to: GFTVHVWSCWQSNGV*DIEPCFQKVSFLTH
Trigger: ATGCGTGAGAAAAGAAACCTTTTGGAAACAAGGCTCAATGTCTCAGACACCGTTACTTTGCCAACAGCTCCAAACATGAACAGTGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 90 bp CGACAAGATTTCCTTGTTGATCTTATCCACATTCCCGATTTTCACTaGTGCAAATCTGCATCCCGTCCTAACCTCTCCTATAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RQDFLVDLIHIPDFH*CKSASRPNLSYKLQ
Trigger: CTGAAGCTTATAGGAGAGGTTAGGACGGGATGCAGATTTGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAGGAAATCTTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS GCA 90 bp TCCAGGCATTCTCCAGGTAGGAAATATAAATATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACAGAACCTTTAAGCAATAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: SRHSPGRKYKYSEPY*RPGQCTEPLSNKAQ
Trigger: CTGTGCTTTATTGCTTAAAGGTTCTGTACATTGGCCTGGCCTGCAATACGGCTCGCTATATTTATATTTCCTACCTGGAGAATGCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CCA 90 bp AGCAGATGTTTCTGTGGAGGAAGGTGTTTCATTCGAAGGTGGTTCTaGTTCCCTGGAAATACCATTAAAGGGATCTGCAAGCACATACTT +
Preference number: 5 (lower is better)
Translates to: SRCFCGGRCFIRRWF*FPGNTIKGICKHIL
Trigger: AAGTATGTGCTTGCAGATCCCTTTAATGGTATTTCCAGGGAACCAGAACCACCTTCGAATGAAACACCTTCCTCCACAGAAACATCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000432036.5
ENST00000445546.1
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTGTAGTCCACTCTGGCTaGGAGACATTCCCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSVVHSG*ETFPAV
Trigger: AACAGCTGGGAATGTCTCCAAGCCAGAGTGGACTAC...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTACTCAAGGTAGCAGGTTaGACAAATCCAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLSVTAGFNSYCTGREILLKVAG*TNPMPR
Trigger: CCTGGGCATTGGATTTGTCAAACCTGCTACCTTGAG...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCTGGTGGGGTGAGTTGTaGGGCGAATCTTTGGTACAC +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFWWGEL*GESLVH
Trigger: GTGTACCAAAGATTCGCCCAACAACTCACCCCACCA...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCAGGGTTGTAGTTCCATaGAGGTCTTCCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTRVVVP*RSSKCQ
Trigger: CTGGCATTTGGAAGACCTCAATGGAACTACAACCCT...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACAGGGTTGTAGTTCCATaGAGGTCTTCCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNRVVVP*RSSKCQ
Trigger: CTGGCATTTGGAAGACCTCAATGGAACTACAACCCT...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACCAATTCCTCGGAAGGTaGCAGCAGCCCCAAAATAAT +
Preference number: 5 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNQFLGR*QQPQNN
Trigger: ATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATTG...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACTCTGCCAACATTGTCTaGTCTTCTTCCTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNSANIV*SSSSSG
Trigger: GCCAGATGAGGAAGAAGACAAGACAATGTTGGCAGA...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCTTTTCCCTATTCTCATaGGTCCCCTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAFSLFS*VPCKGC
Trigger: ACAGCCTTTACAGGGGACCAATGAGAATAGGGAAAA...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCGCCCTCACTTTACAATaGATCCTGTCTAATCAGGGT +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAALTLQ*ILSNQG
Trigger: ACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGC...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TCCACATTCACCTCGAAACACTTTCATTCCCTCCACTTACTTAGTGTAACTGCCATCCCAAATGCAGTATaGGGCAGAACTATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: STFTSKHFHSLHLLSVTAIPNAV*GRTMVS
Trigger: TGACACCATAGTTCTGCCCAATACTGCATTTGGGAT...GGCAGTTACACTAAGTAAGTGGAGGGAATGAAAGTGTTTCGAGGTGAATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACACGGTGTCTGAGACATaGAGCCTTGTTTCCAAAAGG +
Preference number: 5 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHTVSET*SLVSKR
Trigger: CCTTTTGGAAACAAGGCTCAATGTCTCAGACACCGT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTCAGGGGTTGCTGTGCTaGAGTTCAAAGTCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSQGLLC*SSKSSP
Trigger: TGGACTTGACTTTGAACTCAAGCACAGCAACCCCTG...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACAGGGTTGTAGTTCCATaGAGGTCTTCCAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: YLLPSFPFMVSYLPPFPHRVVVP*RSSKCQ
Trigger: CTGGCATTTGGAAGACCTCAATGGAACTACAACCCT...GTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCGCGTGTGTCACTCCTaGAAGAACTTCCATGGGGAG +
Preference number: 5 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHRVCHS*KNFHGE
Trigger: CTCCCCATGGAAGTTCTTCAAGGAGTGACACACGCG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAACAATTCCTCGGAAGGTaGCAGCAGCCCCAAAATAAT +
Preference number: 5 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEQFLGR*QQPQNN
Trigger: ATTATTTTGGGGCTGCTGCAACCTTCCGAGGAATTG...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATCATCCTTAACATCCCAAATGCAGTATaGGGCAGAACTATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: NCRFQLLLHWQRNSIILNIPNAV*GRTMVS
Trigger: TGACACCATAGTTCTGCCCAATACTGCATTTGGGAT...GTTAAGGATGATAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp ACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCGTAGCATATGGCACTTaGGGGACAGGAAGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: TYCHPSHSWFPIYHLFLTVAYGT*GTGRKS
Trigger: ACTTTTTCTTCCTGTCCCCAAAGTGCCATATGCTAC...GGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 90 bp GAATATTCTCTCTATGGGACCTTGTATACACCCTCTTTAACTCAGTaGTCACAGAGTACTGAAATTGTTTGCATGTCTATTTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: EYSLYGTLYTPSLTQ*SQSTEIVCMSISPT
Trigger: GGTGGGGGAAATAGACATGCAAACAATTTCAGTACTCTGTGAGCACTGAGTTAAAGAGGGTGTATACAAGGTCCCATAGAGAGAATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS-3UTR CAA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGTAGTCCACTCTGGCTaGGAGACATTCCCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHVVHSG*ETFPAV
Trigger: AACAGCTGGGAATGTCTCCAAGCCAGAGTGGACTAC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTACGGTGTCTGAGACATaGAGCCTTGTTTCCAAAAGG +
Preference number: 5 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFTVSET*SLVSKR
Trigger: CCTTTTGGAAACAAGGCTCAATGTCTCAGACACCGT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTTCTGCCAACATTGTCTaGTCTTCTTCCTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFSANIV*SSSSSG
Trigger: GCCAGATGAGGAAGAAGACAAGACAATGTTGGCAGA...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCGACATCTTCTGTCTGTaGCTGTACCAAGTCGATGGT +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFDIFCL*LYQVDG
Trigger: ACCATCGACTTGGTACAGCAACAGACAGAAGATGTC...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATC +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFISEAR*SLVSCI
Trigger: GATGCAACTCACAAGAGACAACCGTGCTTCTGAGAT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATC +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSISEAR*SLVSCI
Trigger: GATGCAACTCACAAGAGACAACCGTGCTTCTGAGAT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS TCA 90 bp TGGGACCTTGTATACACCCTCTTTAACTCAGTGCTCACAGAGTACTaGAATTGTTTGCATGTCTATTTCCCCCACCAGACTTTCAATAAA +
Preference number: 5 (lower is better)
Translates to: WDLVYTLFNSVLTEY*NCLHVYFPHQTFNK
Trigger: TTTATTGAAAGTCTGGTGGGGGAAATAGACATGCAAACAATTTCAGTACTCTGTGAGCACTGAGTTAAAGAGGGTGTATACAAGGTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTTTCCCTATTCTCATaGGTCCCCTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSFSLFS*VPCKGC
Trigger: ACAGCCTTTACAGGGGACCAATGAGAATAGGGAAAA...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTCCTCACCACTGTTAACCTCTGCTTaGATTTTTAGTGGCAAGCTT +
Preference number: 5 (lower is better)
Translates to: LIAILPIHGFLFTTFSSPLLTSA*IFSGKL
Trigger: AAGCTTGCCACTAAAAATCAAAGCAGAGGTTAACAG...TGGTGAGGAAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTTTCATCCCAAATGCAGTATaGGGCAGAACTATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: CPVSDCVFMRTNILRFSFIPNAV*GRTMVS
Trigger: TGACACCATAGTTCTGCCCAATACTGCATTTGGGAT...GAAAGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTGTAGCATATGGCACTTaGGGGACAGGAAGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFVAYGT*GTGRKS
Trigger: ACTTTTTCTTCCTGTCCCCAAAGTGCCATATGCTAC...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATTTTCCCTATTCTCATaGGTCCCCTTTCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: LLSVTAGFNSYCTGREILFSLFS*VPFHLL
Trigger: AAGGAGATGAAAGGGGACCAATGAGAATAGGGAAAA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS-3UTR CAA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAAAATCCAATGCCCAGGTaGAATAAAACCCAACACAAA +
Preference number: 5 (lower is better)
Translates to: LHWQRNSIILNLTKQRTENPMPR*NKTQHK
Trigger: TTTGTGTTGGGTTTTATTCAACCTGGGCATTGGATT...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATATAGTTGCTACTTATaGCCATCCTTCCCATTCATG +
Preference number: 5 (lower is better)
Translates to: LHWQRNSIILNLTKQRTEYSCYL*PSFPFM
Trigger: CATGAATGGGAAGGATGGCAATAAGTAGCAACTATA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTATATAGTTGCTACTTATaGCCATCCTTCCCATTCATG +
Preference number: 5 (lower is better)
Translates to: LLSVTAGFNSYCTGREILYSCYL*PSFPFM
Trigger: CATGAATGGGAAGGATGGCAATAAGTAGCAACTATA...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAACTGTTAACCTCTGCTTaGATTTTTAGTGGCAAGCTT +
Preference number: 5 (lower is better)
Translates to: LHWQRNSIILNLTKQRTELLTSA*IFSGKL
Trigger: AAGCTTGCCACTAAAAATCAAAGCAGAGGTTAACAG...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CTGCACTGGCAGAGAAATTCTATCATCCTTAACCTAACCAAGCAAAGAACTGAATCAGAAGGTAAAGATTaGGTGGTGGTAACAATAACA +
Preference number: 5 (lower is better)
Translates to: LHWQRNSIILNLTKQRTESEGKD*VVVTIT
Trigger: TGTTATTGTTACCACCACCAAATCTTTACCTTCTGA...TTCAGTTCTTTGCTTGGTTAGGTTAAGGATGATAGAATTTCTCTGCCAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp TTACTTAGTGTAACTGCCGGTTTCAACTCTTACTGCACTGGCAGAGAAATTCTAGTTGTCTCTTGTGAGTaGCATCATCTCTTTAATTTG +
Preference number: 5 (lower is better)
Translates to: LLSVTAGFNSYCTGREILVVSCE*HHLFNL
Trigger: CAAATTAAAGAGATGATGCAACTCACAAGAGACAAC...TAGAATTTCTCTGCCAGTGCAGTAAGAGTTGAAACCGGCAGTTACACTAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTAGCCCTCACTTTACAATaGATCCTGTCTAATCAGGGT +
Preference number: 5 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLALTLQ*ILSNQG
Trigger: ACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGC...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGCCCTCACTTTACAATaGATCCTGTCTAATCAGGGT +
Preference number: 5 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHALTLQ*ILSNQG
Trigger: ACCCTGATTAGACAGGATCAATTGTAAAGTGAGGGC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTAGCTTCAACTTCTTGTaGATCATAAACAAGCATGAC +
Preference number: 5 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFSFNFL*IINKHD
Trigger: GTCATGCTTGTTTATGATCAACAAGAAGTTGAAGCT...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CATTGTCCAGTGTCTGACTGTGTCTTCATGAGAACGAATATACTGAGATTTTCTAGCTTCAACTTCTTGTaGATCATAAACAAGCATGAC +
Preference number: 5 (lower is better)
Translates to: HCPVSDCVFMRTNILRFSSFNFL*IINKHD
Trigger: GTCATGCTTGTTTATGATCAACAAGAAGTTGAAGCT...AGAAAATCTCAGTATATTCGTTCTCATGAAGACACAGTCAGACACTGGACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp AGTTGCTACTTATTGCCATCCTTCCCATTCATGGTTTCCTATTTACCACCTTTTGTTGTCTCTTGTGAGTaGCATCATCTCTTTAATTTG +
Preference number: 5 (lower is better)
Translates to: SCYLLPSFPFMVSYLPPFVVSCE*HHLFNL
Trigger: CAAATTAAAGAGATGATGCAACTCACAAGAGACAAC...AAAAGGTGGTAAATAGGAAACCATGAATGGGAAGGATGGCAATAAGTAGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATATAGTTGCTACTTATaGCCATCCTTCCCATTCATG +
Preference number: 5 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLYSCYL*PSFPFM
Trigger: CATGAATGGGAAGGATGGCAATAAGTAGCAACTATA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATCTGTTAACCTCTGCTTaGATTTTTAGTGGCAAGCTT +
Preference number: 5 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHLLTSA*IFSGKL
Trigger: AAGCTTGCCACTAAAAATCAAAGCAGAGGTTAACAG...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS-3UTR CAA 90 bp CCTCTCTCTCCTGTGCTCATCCACAGCTATTATAAATTATATAATTCACCTTTATCAGAAGGTAAAGATTaGGTGGTGGTAACAATAACA +
Preference number: 5 (lower is better)
Translates to: PLSPVLIHSYYKLYNSPLSEGKD*VVVTIT
Trigger: TGTTATTGTTACCACCACCAAATCTTTACCTTCTGA...TAAAGGTGAATTATATAATTTATAATAGCTGTGGATGAGCACAGGAGAGAGAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS-3UTR CAA 90 bp CAAGTTTTTGACTTCCTACAGTCAGTTTCACAAATCCACATACTGTACATTCATGTTGTCTCTTGTGAGTaGCATCATCTCTTTAATTTG +
Preference number: 5 (lower is better)
Translates to: QVFDFLQSVSQIHILYIHVVSCE*HHLFNL
Trigger: CAAATTAAAGAGATGATGCAACTCACAAGAGACAAC...ATGAATGTACAGTATGTGGATTTGTGAAACTGACTGTAGGAAGTCAAAAACTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
CDS TCA 72 bp GAGCAGATGTCCTCAGCTCAGGGGGAACGGCTGCACTaGGGTAAGAAATGCATGCTGCCCAGATGGCCGCGT +
Preference number: 6 (lower is better)
Translates to: EQMSSAQGERLH*GKKCMLPRWPR
Trigger: ACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGGACATCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 72 bp GCCCTGAGCAGATGTCCTCAGCTCAGGGGGAACGGCTaGACTGAGGTAAGAAATGCATGCTGCCCAGATGGC +
Preference number: 6 (lower is better)
Translates to: ALSRCPQLRGNG*TEVRNACCPDG
Trigger: GCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAGCTGAGGACATCTGCTCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 72 bp CTCAGGGGGAACGGCTGCACTGAGGTAAGAAATGCATaGTGCCCAGATGGCCGCGTGTGTCACTCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: LRGNGCTEVRNA*CPDGRVCHSLK
Trigger: CTTCAAGGAGTGACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS GCA 72 bp AGGGGGAACGGCTGCACTGAGGTAAGAAATGCATGCTaGCCAGATGGCCGCGTGTGTCACTCCTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: RGNGCTEVRNAC*PDGRVCHSLKN
Trigger: GTTCTTCAAGGAGTGACACACGCGGCCATCTGGGCAGCATGCATTTCTTACCTCAGTGCAGCCGTTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS CAA 90 bp GAGCCATACTGCACGCTGCAGAGCAGCTTGATTAAGTCCCAAAAGTaGAAGGCCTGCGAGTGGCTTGTGGTGGTTGGTGTCTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: EPYCTLQSSLIKSQK*KACEWLVVVGVSSE
Trigger: CTCTGAGGAGACACCAACCACCACAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTGCAGCGTGCAGTATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CAA 90 bp GGGTGGAAGTCTGGGCTCAATGCGTGGCATGACATCTTCTGTCTGTaGCTGTACCAAGTCGATGGTTGCTATAGGAACGGGACTGGAGGG +
Preference number: 6 (lower is better)
Translates to: GWKSGLNAWHDIFCL*LYQVDGCYRNGTGG
Trigger: CCCTCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAGACTTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS GCA 72 bp TCAGGGCAAAGAGCAGTAGGATCACCAAGCAGGCCATaGCAATTCCTCGGAAGGTTGCAGCAGCCCCAAAAT +
Preference number: 6 (lower is better)
Translates to: SGQRAVGSPSRP*QFLGRLQQPQN
Trigger: ATTTTGGGGCTGCTGCAACCTTCCGAGGAATTGGCATGGCCTGCTTGGTGATCCTACTGCTCTTTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS CCA 72 bp GTCTTGTCTTCTTCCTCATCTGGCACTGCCAGCCACTaGATCAGGGCAAAGAGCAGTAGGATCACCAAGCAG +
Preference number: 6 (lower is better)
Translates to: VLSSSSSGTASH*IRAKSSRITKQ
Trigger: CTGCTTGGTGATCCTACTGCTCTTTGCCCTGATCCAGTGGCTGGCAGTGCCAGATGAGGAAGAAGACAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
CDS CAA 72 bp GTGGTGGTTGGTGTCTCCTCAGAGGACTCTGTAGAGTaGTTCCTTTCCACCTGCGGGATCTCCACCTCTTTC +
Preference number: 6 (lower is better)
Translates to: VVVGVSSEDSVE*FLSTCGISTSF
Trigger: GAAAGAGGTGGAGATCCCGCAGGTGGAAAGGAACAACTCTACAGAGTCCTCTGAGGAGACACCAACCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CAA 90 bp CAAGCCACAAACAGCACTGAGCCATACTGCACGCTGCAGAGCAGCTaGATTAAGTCCCAAAAGTTGAAGGCCTGCGAGTGGCTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: QATNSTEPYCTLQSS*IKSQKLKACEWLVV
Trigger: CACCACAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTGCAGCGTGCAGTATGGCTCAGTGCTGTTTGTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 72 bp CAGAGCAGCTTGATTAAGTCCCAAAAGTTGAAGGCCTaGGAGTGGCTTGTGGTGGTTGGTGTCTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: QSSLIKSQKLKA*EWLVVVGVSSE
Trigger: CTCTGAGGAGACACCAACCACCACAAGCCACTCGCAGGCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 72 bp CCCATGAACCAAGCCACAAACAGCACTGAGCCATACTaGACGCTGCAGAGCAGCTTGATTAAGTCCCAAAAG +
Preference number: 6 (lower is better)
Translates to: PMNQATNSTEPY*TLQSSLIKSQK
Trigger: CTTTTGGGACTTAATCAAGCTGCTCTGCAGCGTGCAGTATGGCTCAGTGCTGTTTGTGGCTTGGTTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 72 bp CTGGGCTCAATGCGTGGCATGACATCTTCTGTCTGTTaGTGTACCAAGTCGATGGTTGCTATAGGAACGGGA +
Preference number: 6 (lower is better)
Translates to: LGSMRGMTSSVC*CTKSMVAIGTG
Trigger: TCCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CAA 72 bp GATTTGGTGGTGGTAACAATAACAGTGGTTGTCTCCTaGGTTACGCTTCCTGGGGAGACAGGGGTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: DLVVVTITVVVS*VTLPGETGVAV
Trigger: CACAGCAACCCCTGTCTCCCCAGGAAGCGTAACCAAGGAGACAACCACTGTTATTGTTACCACCACCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CAA 72 bp TCTGGGCTCAATGCGTGGCATGACATCTTCTGTCTGTaGCTGTACCAAGTCGATGGTTGCTATAGGAACGGG +
Preference number: 6 (lower is better)
Translates to: SGLNAWHDIFCL*LYQVDGCYRNG
Trigger: CCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS TCA 72 bp TTTTCTTGGGTGGAAGTCTGGGCTCAATGCGTGGCATaGCATCTTCTGTCTGTTGCTGTACCAAGTCGATGG +
Preference number: 6 (lower is better)
Translates to: FSWVEVWAQCVA*HLLSVAVPSRW
Trigger: CCATCGACTTGGTACAGCAACAGACAGAAGATGTCATGCCACGCATTGAGCCCAGACTTCCACCCAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CAA 90 bp GAAGGTAAAGATTTGGTGGTGGTAACAATAACAGTGGTTGTCTCCTaGGTTACGCTTCCTGGGGAGACAGGGGTTGCTGTGCTTGAGTTC +
Preference number: 6 (lower is better)
Translates to: EGKDLVVVTITVVVS*VTLPGETGVAVLEF
Trigger: GAACTCAAGCACAGCAACCCCTGTCTCCCCAGGAAGCGTAACCAAGGAGACAACCACTGTTATTGTTACCACCACCAAATCTTTACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS TCA 72 bp GGTTACGCTTCCTGGGGAGACAGGGGTTGCTGTGCTTaGGTTCAAAGTCAAGTCCATCATACGGTTAGTAAT +
Preference number: 6 (lower is better)
Translates to: GYASWGDRGCCA*VQSQVHHTVSN
Trigger: ATTACTAACCGTATGATGGACTTGACTTTGAACTCAAGCACAGCAACCCCTGTCTCCCCAGGAAGCGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 72 bp GACATCTTCTGTCTGTTGCTGTACCAAGTCGATGGTTaGTATAGGAACGGGACTGGAGGGAACAGGAATTCT +
Preference number: 6 (lower is better)
Translates to: DIFCLLLYQVDG*YRNGTGGNRNS
Trigger: AGAATTCCTGTTCCCTCCAGTCCCGTTCCTATAGCAACCATCGACTTGGTACAGCAACAGACAGAAGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CAA 90 bp CTCAGAAGCACGGTTGTCTCTTGTGAGTTGCATCATCTCTTTAATTaGGTAGAGTGCATAGACAAAGGTCACCCAGGGAGAAGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: LRSTVVSCELHHLFN*VECIDKGHPGRRAD
Trigger: GTCAGCTCTTCTCCCTGGGTGACCTTTGTCTATGCACTCTACCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGTGCTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000486123.1
CDS GCA 72 bp TCCATCATACGGTTAGTAATTTCACCTGTCTGGGGCTaGAGAGTGGGTTCACTGTTCATGTTTGGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: SIIRLVISPVWG*RVGSLFMFGAV
Trigger: AACAGCTCCAAACATGAACAGTGAACCCACTCTGCAGCCCCAGACAGGTGAAATTACTAACCGTATGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CCA 72 bp ACTTGCATTGGTGGGGTGAGTTGTTGGGCGAATCTTTaGTACACATCTCAAGGTAGCAGGTTTGACAAATCC +
Preference number: 6 (lower is better)
Translates to: TCIGGVSCWANL*YTSQGSRFDKS
Trigger: GGATTTGTCAAACCTGCTACCTTGAGATGTGTACCAAAGATTCGCCCAACAACTCACCCCACCAATGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CCA 72 bp GTCAAGTCCATCATACGGTTAGTAATTTCACCTGTCTaGGGCTGCAGAGTGGGTTCACTGTTCATGTTTGGA +
Preference number: 6 (lower is better)
Translates to: VKSIIRLVISPV*GCRVGSLFMFG
Trigger: TCCAAACATGAACAGTGAACCCACTCTGCAGCCCCAGACAGGTGAAATTACTAACCGTATGATGGACTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS GCA 72 bp TCTCCAGGTAGGAAATATAAATATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACAGAACCCTTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SPGRKYKYSEPY*RPGQCTEPFSF
Trigger: GAAGGAAAAGGGTTCTGTACATTGGCCTGGCCTGCAATACGGCTCGCTATATTTATATTTCCTACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444317.1
CDS CCA 72 bp TTCTGTGGAGGAAGGTGTTTCATTCGAAGGTGGTTCTaGTTCCCTGGAAATACCATTAAAGGGATCTGCAAG +
Preference number: 6 (lower is better)
Translates to: FCGGRCFIRRWF*FPGNTIKGICK
Trigger: CTTGCAGATCCCTTTAATGGTATTTCCAGGGAACCAGAACCACCTTCGAATGAAACACCTTCCTCCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000432036.5
ENST00000445546.1
CDS GCA 72 bp TCTTGTGAGTTGCATCATCTCTTTAATTTGGTAGAGTaGATAGACAAAGGTCACCCAGGGAGAAGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: SCELHHLFNLVE*IDKGHPGRRAD
Trigger: GTCAGCTCTTCTCCCTGGGTGACCTTTGTCTATGCACTCTACCAAATTAAAGAGATGATGCAACTCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS GCA 72 bp CTTGTTGATCTTATCCACATTCCCGATTTTCACTGCTaGAAATCTGCATCCCGTCCTAACCTCTCCTATAAG +
Preference number: 6 (lower is better)
Translates to: LVDLIHIPDFHC*KSASRPNLSYK
Trigger: CTTATAGGAGAGGTTAGGACGGGATGCAGATTTGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS GCA 72 bp TTCCTTGTTGATCTTATCCACATTCCCGATTTTCACTaGTGCAAATCTGCATCCCGTCCTAACCTCTCCTAT +
Preference number: 6 (lower is better)
Translates to: FLVDLIHIPDFH*CKSASRPNLSY
Trigger: ATAGGAGAGGTTAGGACGGGATGCAGATTTGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CCA 72 bp AGATGTTTCTGTGGAGGAAGGTGTTTCATTCGAAGGTaGTTCTGGTTCCCTGGAAATACCATTAAAGGGATC +
Preference number: 6 (lower is better)
Translates to: RCFCGGRCFIRR*FWFPGNTIKGI
Trigger: GATCCCTTTAATGGTATTTCCAGGGAACCAGAACCACCTTCGAATGAAACACCTTCCTCCACAGAAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000432036.5
ENST00000445546.1
CDS CAA 72 bp GGGCGAATCTTTGGTACACATCTCAAGGTAGCAGGTTaGACAAATCCAATGCCCAGGTTGAATAAAACCCAA +
Preference number: 6 (lower is better)
Translates to: GRIFGTHLKVAG*TNPMPRLNKTQ
Trigger: TTGGGTTTTATTCAACCTGGGCATTGGATTTGTCAAACCTGCTACCTTGAGATGTGTACCAAAGATTCGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281416.11
ENST00000392328.6
CDS CAA 72 bp ACGGTTGTCTCTTGTGAGTTGCATCATCTCTTTAATTaGGTAGAGTGCATAGACAAAGGTCACCCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: TVVSCELHHLFN*VECIDKGHPGR
Trigger: TCTCCCTGGGTGACCTTTGTCTATGCACTCTACCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000444317.1
ENST00000486123.1
CDS CAA 72 bp TTGGTCCCCTGTAAAGGCTGTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATCATCTCTTTAATTTGG +
Preference number: 6 (lower is better)
Translates to: LVPCKGCISEAR*SLVSCIISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGTGCTTCTGAGATACAGCCTTTACAGGGGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000412482.1
CDS TCA 72 bp GTATACACCCTCTTTAACTCAGTGCTCACAGAGTACTaGAATTGTTTGCATGTCTATTTCCCCCACCAGACT +
Preference number: 6 (lower is better)
Translates to: VYTLFNSVLTEY*NCLHVYFPHQT
Trigger: AGTCTGGTGGGGGAAATAGACATGCAAACAATTTCAGTACTCTGTGAGCACTGAGTTAAAGAGGGTGTATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS GCA 72 bp TCTCCAGGTAGGAAATATAAATATAGCGAGCCGTATTaGAGGCCAGGCCAATGTACAGAACCTTTAAGCAAT +
Preference number: 6 (lower is better)
Translates to: SPGRKYKYSEPY*RPGQCTEPLSN
Trigger: ATTGCTTAAAGGTTCTGTACATTGGCCTGGCCTGCAATACGGCTCGCTATATTTATATTTCCTACCTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CAA 72 bp AGGCTGTATCTCAGAAGCACGGTTGTCTCTTGTGAGTaGCATCATCTCTTTAATTTGGTAGAGTGCATAGAC +
Preference number: 6 (lower is better)
Translates to: RLYLRSTVVSCE*HHLFNLVECID
Trigger: GTCTATGCACTCTACCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGTGCTTCTGAGATACAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281416.11
ENST00000392328.6
ENST00000434582.5
ENST00000486123.1
CDS CAA 72 bp GTCCTAACCTCTCCTATAAGCTTCAGACTTACAATATaGTGTCAACTGCCTGCTAGACATCCCCATCTAGAT +
Preference number: 6 (lower is better)
Translates to: VLTSPISFRLTI*CQLPARHPHLD
Trigger: ATCTAGATGGGGATGTCTAGCAGGCAGTTGACACAATATTGTAAGTCTGAAGCTTATAGGAGAGGTTAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CAA 72 bp GAACTCCATAAGGCAGAATATTCTCTCTATGGGACCTaGTATACACCCTCTTTAACTCAGTGCTCACAGAGT +
Preference number: 6 (lower is better)
Translates to: ELHKAEYSLYGT*YTPSLTQCSQS
Trigger: ACTCTGTGAGCACTGAGTTAAAGAGGGTGTATACAAGGTCCCATAGAGAGAATATTCTGCCTTATGGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS CAA 72 bp ATGTGCAACTGTAAAGGCTGTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATCATCTCTTTAATTTGG +
Preference number: 6 (lower is better)
Translates to: MCNCKGCISEAR*SLVSCIISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGTGCTTCTGAGATACAGCCTTTACAGTTGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434582.5
CDS CAA 72 bp AGCCCATTTCTCTTCTTAGACGACAAGATTTCCTTGTaGATCTTATCCACATTCCCGATTTTCACTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SPFLFLDDKISL*ILSTFPIFTAA
Trigger: TGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAGGAAATCTTGTCGTCTAAGAAGAGAAATGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CAA 72 bp AACTGTACCTGTAAAGGCTGTATCTCAGAAGCACGGTaGTCTCTTGTGAGTTGCATCATCTCTTTAATTTGG +
Preference number: 6 (lower is better)
Translates to: NCTCKGCISEAR*SLVSCIISLIW
Trigger: CCAAATTAAAGAGATGATGCAACTCACAAGAGACAACCGTGCTTCTGAGATACAGCCTTTACAGGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS CAA 90 bp ATTTTCCTCAGCCCATTTCTCTTCTTAGACGACAAGATTTCCTTGTaGATCTTATCCACATTCCCGATTTTCACTGCTGCAAATCTGCAT +
Preference number: 6 (lower is better)
Translates to: IFLSPFLFLDDKISL*ILSTFPIFTAANLH
Trigger: ATGCAGATTTGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAGGAAATCTTGTCGTCTAAGAAGAGAAATGGGCTGAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CAA 90 bp TTGATTTTCCTCAGCCCATTTCTCTTCTTAGACGACAAGATTTCCTaGTTGATCTTATCCACATTCCCGATTTTCACTGCTGCAAATCTG +
Preference number: 6 (lower is better)
Translates to: LIFLSPFLFLDDKIS*LILSTFPIFTAANL
Trigger: CAGATTTGCAGCAGTGAAAATCGGGAATGTGGATAAGATCAACAAGGAAATCTTGTCGTCTAAGAAGAGAAATGGGCTGAGGAAAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489793.1
CDS CAA 90 bp AGTTTTCCTGAACTCCATAAGGCAGAATATTCTCTCTATGGGACCTaGTATACACCCTCTTTAACTCAGTGCTCACAGAGTACTGAAATT +
Preference number: 6 (lower is better)
Translates to: SFPELHKAEYSLYGT*YTPSLTQCSQSTEI
Trigger: AATTTCAGTACTCTGTGAGCACTGAGTTAAAGAGGGTGTATACAAGGTCCCATAGAGAGAATATTCTGCCTTATGGAGTTCAGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486123.1
CDS GCA 72 bp CTCTATGGGACCTTGTATACACCCTCTTTAACTCAGTaGTCACAGAGTACTGAAATTGTTTGCATGTCTATT +
Preference number: 6 (lower is better)
Translates to: LYGTLYTPSLTQ*SQSTEIVCMSI
Trigger: AATAGACATGCAAACAATTTCAGTACTCTGTGAGCACTGAGTTAAAGAGGGTGTATACAAGGTCCCATAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486123.1