RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFSD13A (Homo sapiens)

Ensembl gene IDs: ENSG00000138111

Ensembl transcript IDs: ENST00000238936.8, ENST00000369931.3, ENST00000428200.1, ENST00000450947.2, ENST00000469294.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATaGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACAGGGCAG +
Preference number: 1 (lower is better)
Translates to: VPESTTAASSSQAAG*APTPHGRPVCTTGQ
Trigger: CTGCCCTGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR CCA 90 bp AGCTACCCGCTGCCATGTCTTCCAGGCTGCACTAGAGGAAGGCAGTaGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGG +
Preference number: 1 (lower is better)
Translates to: SYPLPCLPGCTRGRQ*SRVLVKLAPGRVRW
Trigger: CCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGGCAGCGGGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR GCA 90 bp TTTCACTGCAGTGATGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTaGCATGTCTTCCAGGCTGCACTAGAGGAAGGCAGTGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: FHCSDASGSAPGATR*HVFQAALEEGSGAG
Trigger: CCCTGCTCCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATCACTGCAGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 90 bp CCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTaGGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGC +
Preference number: 1 (lower is better)
Translates to: PDWAKGSSCSIKSGS*VHHSGQLQSGSGMG
Trigger: GCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR GCA 90 bp TTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTaGACTAGAGGAAGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCT +
Preference number: 1 (lower is better)
Translates to: FWLSPRSYPLPCLPG*TRGRQWSRVLVKLA
Trigger: AGCTAGTTTTACCAGCACCCTGCTCCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 90 bp CTTGGTCCTCTTCTGTCCTCCTGCCTTACAAGAGAAGCACGTCCCTaGGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAGACAGGT +
Preference number: 1 (lower is better)
Translates to: LGPLLSSCLTREARP*AHMAQPLPKLSQTG
Trigger: ACCTGTCTGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTTGTAAGGCAGGAGGACAGAAGAGGACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 90 bp TTGCCCAAGCTGAGCCAGACAGGTAAGCAGAGACTTTCACTGCAGTaGTGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTT +
Preference number: 1 (lower is better)
Translates to: LPKLSQTGKQRLSLQ*CFWLSPRSYPLPCL
Trigger: AAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATCACTGCAGTGAAAGTCTCTGCTTACCTGTCTGGCTCAGCTTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 90 bp GAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTaGGCCAGACAGGTAAGCAGAGACTTTCACTGCAGTGATGCTTCT +
Preference number: 1 (lower is better)
Translates to: EKHVPEHIWPSPCPS*ARQVSRDFHCSDAS
Trigger: AGAAGCATCACTGCAGTGAAAGTCTCTGCTTACCTGTCTGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR GCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGCCATGTCTTCCAGGCTaGACTAGAGGAAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQPCLPG*TRGRQW
Trigger: CCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGG...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGAAAAGTAGCCGGGCATaGTGGCACGCTCCTATAATC +
Preference number: 2 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWKSSRA*WHAPII
Trigger: GATTATAGGAGCGTGCCACCATGCCCGGCTACTTTT...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR GCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGAGCAGAGACTTTCACTaGAGTGATGCTTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWSRDFH*SDASGS
Trigger: TGAGCCAGAAGCATCACTGCAGTGAAAGTCTCTGCT...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR GCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCACCAGGAGCTACCCGCTaGCATGTCTTCCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPPGATR*HVFQAA
Trigger: TGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGG...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR TCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAAGACTTTCACTGCAGTaGTGCTTCTGGCTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPRLSLQ*CFWLSP
Trigger: GGGGCTGAGCCAGAAGCATCACTGCAGTGAAAGTCT...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCAATACAAAAATTAGGTTaGCCACAGTGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPIQKLG*PQWLTP
Trigger: AGGCGTGAGCCACTGTGGCCAACCTAATTTTTGTAT...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAAGCCCCCTCCCTTCTTaGTCCTCTTCTGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKSPLPS*SSSVLL
Trigger: CAGGAGGACAGAAGAGGACCAAGAAGGGAGGGGGCT...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CCA 90 bp TTGAACCTGGGTGGTGGTTTCAGTGAGCCCAGATTGCACCACTGCAACAGATCCCAGCAGCATCCTCAGTaGGGTGACCTTGCCACAGCT +
Preference number: 2 (lower is better)
Translates to: LNLGGGFSEPRLHHCNRSQQHPQ*GDLATA
Trigger: AGCTGTGGCAAGGTCACCCCACTGAGGATGCTGCTG...GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAAACCACCACCCAGGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR TCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGGCAGGATAATTGCTTaGACCTGGGTGGTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLGRIIA*TWVVVS
Trigger: TGAAACCACCACCCAGGTTCAAGCAATTATCCTGCC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR GCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAACTGAGGCAGGATAATTaGTTGAACCTGGGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKLRQDN*LNLGGG
Trigger: ACCACCACCCAGGTTCAAGCAATTATCCTGCCTCAG...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR TCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGAGAGAAGCACGTCCCTaGGCACATATGGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVREARP*AHMAQP
Trigger: GGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCT...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CAA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCCTAAGGTCAGGGGTTaGAGACTAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWPKVRG*RLAWPT
Trigger: TGTTGGCCAGGCTAGTCTCAAACCCCTGACCTTAGG...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR GCA 72 bp AGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTaGACTAGAGGAAGGCAGTGGAGCAGGGTGCTGGTA +
Preference number: 3 (lower is better)
Translates to: SPRSYPLPCLPG*TRGRQWSRVLV
Trigger: TACCAGCACCCTGCTCCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 72 bp CTGAGCCAGACAGGTAAGCAGAGACTTTCACTGCAGTaGTGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTG +
Preference number: 3 (lower is better)
Translates to: LSQTGKQRLSLQ*CFWLSPRSYPL
Trigger: CAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATCACTGCAGTGAAAGTCTCTGCTTACCTGTCTGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 72 bp CTTCTGTCCTCCTGCCTTACAAGAGAAGCACGTCCCTaGGCACATATGGCCCAGCCCTTGCCCAAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: LLSSCLTREARP*AHMAQPLPKLS
Trigger: GCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTTGTAAGGCAGGAGGACAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CAA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTACATATGGCCCAGCCCTaGCCCAAGCTGAGCCAGACA +
Preference number: 3 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVHMAQP*PKLSQT
Trigger: TGTCTGGCTCAGCTTGGGCAAGGGCTGGGCCATATG...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 72 bp GTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTaGGCCAGACAGGTAAGCAGAGACTTTCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: VPEHIWPSPCPS*ARQVSRDFHCS
Trigger: ACTGCAGTGAAAGTCTCTGCTTACCTGTCTGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR TCA 72 bp GCAAAAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTaGGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: AKGSSCSIKSGS*VHHSGQLQSGS
Trigger: GCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
3UTR-3UTR CAA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCTTCAGTGAGCCCAGATaGCACCACTGCAACAGATCC +
Preference number: 3 (lower is better)
Translates to: KGAVAVLKVVPESTTAASFSEPR*HHCNRS
Trigger: GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAA...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGTGGAGCTGGGGGCTCTaGCCAGGGATGGGCACTCCC +
Preference number: 4 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQWSWGL*PGMGTP
Trigger: GGGAGTGCCCATCCCTGGCCAGAGCCCCCAGCTCCA...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGCAGGGTTTGGGCCTGTaGCAGGTTCTGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQQGLGL*QVLALG
Trigger: GCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTG...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCGGAGAGCCCGGCGCCTaGCCGGGGCTGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLGEPGA*PGLGAE
Trigger: CTCAGCTCCCAGCCCCGGTCAGGCGCCGGGCTCTCC...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGAACAGAGCAGCCAGGTaGCCAGCAGCGGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWNRAAR*PAAGQR
Trigger: CCTTTGCCCCGCTGCTGGGCACCTGGCTGCTCTGTT...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACAGGGAGCCGGCCGCGCTaGAGAGGGAGCAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SQAAGWAPTPHGRPVCTTGSRPR*RGSSRS
Trigger: ACTTCTACTGCTCCCTCTTCAGCGCGGCCGGCTCCC...TGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGTGGGAGCTGAGGAACTaGCGGTCACTGAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWWELRN*RSLSQP
Trigger: CGGTTGGCTCAGTGACCGGCAGTTCCTCAGCTCCCA...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGTGCAGGCGTCTCCCATaGAGCGTGAACTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWCRRLP*SVNWDQ
Trigger: CTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCA...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTAGAGGCACAGCAGGCTaGGGTGGTCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTRGTAG*GGPGRP
Trigger: TGGCCGGCCCGGACCACCTCAGCCTGCTGTGCCTCT...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTTGCCAGCCCAGGGCCTaGACCCGGGCCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTCQPRA*TRASTT
Trigger: TGTGGTGCTGGCCCGGGTGCAGGCCCTGGGCTGGCA...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACAGAGGAGTGCCGAGGCTaGCTGCTTGCGGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SQAAGWAPTPHGRPVCTTEECRG*LLAVVQ
Trigger: CTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTC...TGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGCATAGACCACAGCTGTaGGCAGACCCAGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQHRPQL*ADPATR
Trigger: CCTGGTTGCTGGGTCTGCCCACAGCTGTGGTCTATG...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCAGCCTCAGCAGCTGTGTaGCCCCCAGAAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPASAAV*PPESPA
Trigger: GGCTGGGCTTTCTGGGGGCCACACAGCTGCTGAGGC...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGGCAAAGGTCTGGCCTaGCTTGGTCACCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQGKGLA*LGHQGN
Trigger: GTTGCCTTGGTGACCAAGCCAGGCCAGACCTTTGCC...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTGAGGCCGTGTGGGGGTaGGGGAGCCCTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTEAVWG*GSPAAE
Trigger: CTCTGCTGCAGGGCTCCCCCACCCCCACACGGCCTC...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCACGAAGAGGGGGTCATTaGGGCTGTTCCAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VHHSGQLQSGSGMGSHAPRRGGH*GCSRGE
Trigger: TTCTCCTCTGGAACAGCCTCAATGACCCCCTCTTCG...TGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACAAGCAAGGCATGGTGGTaGAGGTCCACGAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SQAAGWAPTPHGRPVCTTSKAWW*RSTSVR
Trigger: CCTGACGCTCGTGGACCTGCACCACCATGCCTTGCT...TGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTAGTCAGGCAGCGGGATaGGCTCCCACGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTSQAAG*APTPHG
Trigger: GCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TGGTTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCTCTTTAGAGGCCGTGTaGGGGTGGGGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WFLSPPQRPAPVRQRDGLSLEAV*GWGSPA
Trigger: TGCAGGGCTCCCCCACCCCCACACGGCCTCTAAAGA...GAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCAAGAGAAGCACGTCCCTaGGCACATATGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPREARP*AHMAQP
Trigger: GGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCT...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCCGATGGCGTGCCAGCTaGCGGAGATACCGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLRWRAS*RRYRPK
Trigger: CTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCG...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCACCGGGGAGGGCTCATaGCCACAGGCGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLTGEGS*PQAVFP
Trigger: TGGGAAGACCGCCTGTGGCCATGAGCCCTCCCCGGT...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCAAGCGGGGCAAAGGTCTaGCCTGGCTTGGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPSGAKV*PGLVTK
Trigger: CTTGGTGACCAAGCCAGGCCAGACCTTTGCCCCGCT...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTAGCCCAGCCCAGAGCTaGCAGCCAGTGTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTSPAQS*QPVSRR
Trigger: TCTGCGTGACACTGGCTGTCAGCTCTGGGCTGGGCT...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCGATACCGGCCCAAGGTaGTGCTGTCCGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLDTGPR*CCPPPH
Trigger: GTGAGGAGGCGGACAGCATCACCTTGGGCCGGTATC...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACAAGACTTTCACTGCAGTaGTGCTTCTGGCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SQAAGWAPTPHGRPVCTTRLSLQ*CFWLSP
Trigger: GGGGCTGAGCCAGAAGCATCACTGCAGTGAAAGTCT...TGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCAGGCACAGCAAGAACTaGAGGCCAGCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLRHSKN*RPAGAQ
Trigger: CTGGGCCCCAGCTGGCCTGCAGTTCTTGCTGTGCCT...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCCCGAGGCTGCCTGCTTaGGGTGGTTCAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLPRLPA*GGSAPG
Trigger: ACCTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGG...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCAGTGCCGAGGCTGCCTaGTTGCGGTGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLSAEAA*LRWFST
Trigger: GGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACT...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGCTGAGGCAGGATAATTaGTTGAACCTGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQLRQDN*LNLGGG
Trigger: ACCACCACCCAGGTTCAAGCAATTATCCTGCCTCAG...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGCGCCTGACCGGGGCTaGGAGCTGAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKAPDRG*ELRNCR
Trigger: CCGGCAGTTCCTCAGCTCCCAGCCCCGGTCAGGCGC...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TGGTTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCAGAGGCCCAACAGGATaGAGCCCGTGGAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WFLSPPQRPAPVRQRDGLRGPTG*SPWKGR
Trigger: TCTCCCTTTCCACGGGCTCCATCCTGTTGGGCCTCT...GAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACAGCAGCATCCTCAGTaGGGTGACCTTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPQQHPQ*GDLATA
Trigger: AGCTGTGGCAAGGTCACCCCACTGAGGATGCTGCTG...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCGGTGCGGTCGTGGGCTaGGAGGGCCAGGTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGAVAVLKVVPESTTAASGAVVG*EGQVGQ
Trigger: CTGGCCGACCTGGCCCTCTCAGCCCACGACCGCACC...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCATCTGGCGCTGGGCCTTaGCCATGTGCAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPSGAGP*PCAGVS
Trigger: GGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGA...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp TGGTTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCACAGTCAGCTTTCCCTaGCTGGGCAAAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WFLSPPQRPAPVRQRDGLTVSFP*LGKREQ
Trigger: CTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGT...GAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAAGGTGGGTGCGGTCGTaGGCTGAGAGGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKRWVRS*AERARS
Trigger: CGACCTGGCCCTCTCAGCCCACGACCGCACCCACCT...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAGGAACTGCCGGTCACTaGGCCAACCGAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPGTAGH*ANRRGG
Trigger: ACCCCCTCTTCGGTTGGCTCAGTGACCGGCAGTTCC...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GATGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCAAGCCCTTGCCCAAGCTaGGCCAGACAGGTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DASGSAPGATRCHVFQAASPCPS*ARQVSR
Trigger: TCTGCTTACCTGTCTGGCTCAGCTTGGGCAAGGGCT...TGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TTCCTGAGTCCACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCATGGTCGGACAACAGATaGTCCAGGAAGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FLSPPQRPAPVRQRDGLPWSDNR*SRKRGK
Trigger: CTTCCCTCTCTTCCTGGAGCATCTGTTGTCCGACCA...TGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTGGACTCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCCACAGCAGGCTGAGGTaGTCCGGGCCGGCCAACAAC +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLHSRLR*SGPANN
Trigger: GTTGTTGGCCGGCCCGGACCACCTCAGCCTGCTGTG...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAGCTGCCTGCTTGCGGTaGTTCAGCACCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPAACLR*FSTRSS
Trigger: CGAGGACCTGGTGCTGAACCACCGCAAGCAGGCAGC...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGATACAAAAATTAGGTTaGCCACAGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWIQKLG*PQWLTP
Trigger: AGGCGTGAGCCACTGTGGCCAACCTAATTTTTGTAT...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCGAAGGGTGGACGGAGTaGGAGGTGGGACTTACAGTC +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLEGWTE*EVGLTV
Trigger: GACTGTAAGTCCCACCTCCCACTCCGTCCACCCTTC...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGGGAGCAGTAGAAGTTaGGGTGGGTGCGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLGSSRS*GGCGRG
Trigger: CCCACGACCGCACCCACCTCAACTTCTACTGCTCCC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAGCATCCTCAGTGGGGTaGCCTTGCCACAGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPASSVG*PCHSSH
Trigger: GTGAGAGCTGTGGCAAGGTCACCCCACTGAGGATGC...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGCCAGCAAGGCATGGTaGTGCAGGTCCACGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKASKAW*CRSTSV
Trigger: GACGCTCGTGGACCTGCACCACCATGCCTTGCTGGC...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGGCCTGTGTGCACCACATCAGGTAAGGGAATTTaGAAAGATGGGTCACACGAG +
Preference number: 4 (lower is better)
Translates to: SQAAGWAPTPHGRPVCTTSGKGI*KDGSHE
Trigger: CTCGTGTGACCCATCTTTTCAAATTCCCTTACCTGA...TGTGGTGCACACAGGCCTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp CACCACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGAGAAGGCCATTTTGTTaGTCTTGTACACTGAGACAA +
Preference number: 4 (lower is better)
Translates to: HHSGQLQSGSGMGSHAPWRRPFC*SCTLRQ
Trigger: TTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCT...CCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAACACAGGAAGTTCCGATaGCGTGCCAGCTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKHRKFR*RASCRR
Trigger: TCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTG...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGACAGGTTCTGGCGCTaGGCCTTGACCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLDRFWR*ALTMCR
Trigger: CCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAATACAGGTGCCCTCAGTaGAGACGCGGTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKYRCPQ*RRGCWQ
Trigger: TTGCCAGCAACCGCGTCTTCACTGAGGGCACCTGTA...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAATGGCAGTGGAAGACCTaGACCAGGTCCATGCTCACG +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKWQWKT*TRSMLT
Trigger: CGTGAGCATGGACCTGGTGCAGGTCTTCCACTGCCA...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCAAGTTGCTGTTGAAGTaGCAGTGGAAGACCTGCACC +
Preference number: 4 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLKLLLK*QWKTCT
Trigger: GGTGCAGGTCTTCCACTGCCACTTCAACAGCAACTT...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCATCCACAACCAGGCCTaGGCACCCTGGGTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KGAVAVLKVVPESTTAASIHNQA*APWVLS
Trigger: CGAAAGGACCCAGGGTGCTCAGGCCTGGTTGTGGAT...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TTGAACCTGGGTGGTGGTTTCAGTGAGCCCAGATTGCACCACTGCAACAGATCCGAAGTTCCGATGGCGTaGCAGCTGCCGGAGATACCG +
Preference number: 4 (lower is better)
Translates to: LNLGGGFSEPRLHHCNRSEVPMA*QLPEIP
Trigger: CGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTC...GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAAACCACCACCCAGGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCCCTGCACCAGGTCCATaGTCACGAACCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLPAPGP*SRTTGS
Trigger: ACTTCCTGTGGTTCGTGAGCATGGACCTGGTGCAGG...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTACATGCCAAAGAGGAGTaGCGAGGCTGCCTGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVHAKEE*RGCLLA
Trigger: CGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATG...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCTGGGCCTTGACCATGTaGAGGCGTCTCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: KGAVAVLKVVPESTTAASWALTM*RRLPCS
Trigger: GCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCA...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TTGAACCTGGGTGGTGGTTTCAGTGAGCCCAGATTGCACCACTGCAACAGATCCCCAGGAGCTACCCGCTaGCATGTCTTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LNLGGGFSEPRLHHCNRSPGATR*HVFQAA
Trigger: TGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGG...GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAAACCACCACCCAGGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTAGCCTGTGACAGGTTCTaGCGCTGGGCCTTGACCATG +
Preference number: 4 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVACDRF*RWALTM
Trigger: CATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGC...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGGAAGTAGAGGTTGTTaGGATGGGGAGCGACATAGG +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLGSRGC*DGERHR
Trigger: CCTATGTCGCTCCCCATCTCAACAACCTCTACTTCC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTACGTCTACCAGGTCAGTaGCCACCAAGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVRLPGQ*PPRSAA
Trigger: AGCTGCTGACCTTGGTGGTCACTGACCTGGTAGACG...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAATTAAAAGTGGTTCCTaGGTCCACCACAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKIKSGS*VHHSGQ
Trigger: CTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAAT...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TTGAACCTGGGTGGTGGTTTCAGTGAGCCCAGATTGCACCACTGCAACAGATCCTGTCCGCCTCCTCACTaGCTACAAGCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LNLGGGFSEPRLHHCNRSCPPPH*LQAAPL
Trigger: GAGAGGAGCTGCTTGTAGGCAGTGAGGAGGCGGACA...GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAAACCACCACCCAGGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGTGCAGGGGCTGGAGCTaGGGGCTCTGGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVCRGWS*GLWPGM
Trigger: CATCCCTGGCCAGAGCCCCCAGCTCCAGCCCCTGCA...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAATCAGCTTTCCCTGACTaGGCAAAAGGGAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKSAFPD*AKGSSC
Trigger: GCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGA...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GATGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCAGTTGATCTTGTACACTaGGACAAAGGTGTCCACATA +
Preference number: 4 (lower is better)
Translates to: DASGSAPGATRCHVFQAAVDLVH*DKGVHI
Trigger: TATGTGGACACCTTTGTCTCAGTGTACAAGATCAAC...TGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp AAGAGAAGCACGTCCCTGAGCACATATGGCCCAGCCCTTGCCCAAGCTGAGCCAAGCAGAGACTTTCACTaGAGTGATGCTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KRSTSLSTYGPALAQAEPSRDFH*SDASGS
Trigger: TGAGCCAGAAGCATCACTGCAGTGAAAGTCTCTGCT...TGGCTCAGCTTGGGCAAGGGCTGGGCCATATGTGCTCAGGGACGTGCTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGTGGAAAGGGAGATATaGTCGGACAACAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLVEREI*SDNRCS
Trigger: GGAGCATCTGTTGTCCGACCATATCTCCCTTTCCAC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTAAAACCACTAGAAGGGTaGACGGAGTGGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVKPLEG*TEWEVG
Trigger: TCCCACCTCCCACTCCGTCCACCCTTCTAGTGGTTT...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR TCA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTACACTTCAAGCACAGCTaGAGCAGAGAAACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVHFKHS*SRETSQ
Trigger: CTGAGAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTG...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCTTAACATCCAGGGTTTaGGCCTGTGACAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGAVAVLKVVPESTTAASLTSRV*ACDRFW
Trigger: CCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAA...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCAAAAGTAGCCGGGCATaGTGGCACGCTCCTATAATC +
Preference number: 4 (lower is better)
Translates to: KGAVAVLKVVPESTTAASKSSRA*WHAPII
Trigger: GATTATAGGAGCGTGCCACCATGCCCGGCTACTTTT...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCGGGAATTTGAAAAGATaGGTCACACGAGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLGNLKR*VTRGKV
Trigger: GACTTTTCCTCGTGTGACCCATCTTTTCAAATTCCC...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGAGGTCTGGCCTGGCTTaGTCACCAAGGCAACCATGC +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVRSGLA*SPRQPC
Trigger: GCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCT...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGCCATGCAGCGTGAACTaGGACCAGGTGAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVPCSVN*DQVKSC
Trigger: GCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGG...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGAGCCCCCTCCCTTCTTaGTCCTCTTCTGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVSPLPS*SSSVLL
Trigger: CAGGAGGACAGAAGAGGACCAAGAAGGGAGGGGGCT...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR GCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGCCATGTCTTCCAGGCTaGACTAGAGGAAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVPCLPG*TRGRQW
Trigger: CCACTGCCTTCCTCTAGTGCAGCCTGGAAGACATGG...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGCTGTTGAAGTGGCAGTaGAAGACCTGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVLLKWQ*KTCTRS
Trigger: GGACCTGGTGCAGGTCTTCCACTGCCACTTCAACAG...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp TACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATTAAAAGTGGGACGGAGTGGGAGGTaGGACTTACAGTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: YSQLSLTGQKGAVAVLKVGRSGR*DLQSAF
Trigger: GAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCC...CACTTTTAATACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCCACACAGGCGGGGCTaGGAGCTGAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFPHRRG*ELRNCR
Trigger: CCGGCAGTTCCTCAGCTCCCAGCCCCGCCTGTGTGG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCGATGGCGTGCCAGCTaGCGGAGATACCGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFRWRAS*RRYRPK
Trigger: CTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTACCGGGGAGGGCTCATaGCCACAGGCGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFTGEGS*PQAVFP
Trigger: TGGGAAGACCGCCTGTGGCCATGAGCCCTCCCCGGT...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR TCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGGAACTGCCGGTCACTaGGCCAACCGAAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFGTAGH*ANRRGG
Trigger: ACCCCCTCTTCGGTTGGCTCAGTGACCGGCAGTTCC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR TCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGATACCGGCCCAAGGTaGTGCTGTCCGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFDTGPR*CCPPPH
Trigger: GTGAGGAGGCGGACAGCATCACCTTGGGCCGGTATC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTTGGGAGCTGAGGAACTaGCGGTCACTGAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFWELRN*RSLSQP
Trigger: CGGTTGGCTCAGTGACCGGCAGTTCCTCAGCTCCCA...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGAAGTTCCGATGGCGTaGCAGCTGCCGGAGATACCG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFEVPMA*QLPEIP
Trigger: CGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGTGAGCCACTGCACCTaGACCAGGTCCATGCTCACG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFVSHCT*TRSMLT
Trigger: CGTGAGCATGGACCTGGTGCAGGTGCAGTGGCTCAC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCACAGGAAGTTCCGATaGCGTGCCAGCTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFHRKFR*RASCRR
Trigger: TCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTTGTCCGCCTCCTCACTaGCTACAAGCAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFCPPPH*LQAAPL
Trigger: GAGAGGAGCTGCTTGTAGGCAGTGAGGAGGCGGACA...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCTTGGCGTCCCGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFLGVPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCGGGACGCCAAG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGCAGCCTCGAACTCCTaGGCTCAAGCGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFAASNS*AQAVFP
Trigger: TGGAAAGACCGCTTGAGCCCAGGAGTTCGAGGCTGC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR TCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCGAAGAGGGGGTCATTaGGGCTGTTCCAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFRRGGH*GCSRGE
Trigger: TTCTCCTCTGGAACAGCCTCAATGACCCCCTCTTCG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCCTGCACCAGGTCCATaGTCACGAACCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFPAPGP*SRTTGS
Trigger: ACTTCCTGTGGTTCGTGAGCATGGACCTGGTGCAGG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR GCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGCAATCATAACTCATTaGAGCCTCGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFAIITH*SLELLG
Trigger: GCCCAGGAGTTCGAGGCTGCAATGAGTTATGATTGC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR TCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTTCAGGTAAGGGAATTTaGAAAGATGGGTCACACGAG +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFSGKGI*KDGSHE
Trigger: CTCGTGTGACCCATCTTTTCAAATTCCCTTACCTGA...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR TCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGTTGATCTTGTACACTaGGACAAAGGTGTCCACATA +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFVDLVH*DKGVHI
Trigger: TATGTGGACACCTTTGTCTCAGTGTACAAGATCAAC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CCA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTGGGAATTTGAAAAGATaGGTCACACGAGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: VQPVYILHVLGTALSSSFGNLKR*VTRGKV
Trigger: GACTTTTCCTCGTGTGACCCATCTTTTCAAATTCCC...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS GCA 90 bp CAGGGCACCCAGAACGCCAGGAACGACAGCGCCAGCAGCGGCCCATaGCAGCCCAGGGCCTGCACCCGGGCCAGCACCACAGCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: QGTQNARNDSASSGP*QPRACTRASTTALE
Trigger: CTCAAGGGCTGTGGTGCTGGCCCGGGTGCAGGCCCTGGGCTGGCATGGGCCGCTGCTGGCGCTGTCGTTCCTGGCGTTCTGGGTGCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGAAGGTCTGGCCTGGCTaGGTCACCAAGGCAACCATG +
Preference number: 5 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQKVWPG*VTKATM
Trigger: CATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCTT...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 90 bp GCTGAAGAGGGAGCAGTAGAAGTTGAGGTGGGTGCGGTCGTGGGCTaGGAGGGCCAGGTCGGCCAGCAAGGCATGGTGGTGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: AEEGAVEVEVGAVVG*EGQVGQQGMVVQVH
Trigger: GTGGACCTGCACCACCATGCCTTGCTGGCCGACCTGGCCCTCTCAGCCCACGACCGCACCCACCTCAACTTCTACTGCTCCCTCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp AGAGCAGCCAGGTGCCCAGCAGCGGGGCAAAGGTCTGGCCTGGCTTaGTCACCAAGGCAACCATGCCAAAGAGGAGTGCCGAGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RAARCPAAGQRSGLA*SPRQPCQRGVPRLP
Trigger: AGGCAGCCTCGGCACTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCTTTGCCCCGCTGCTGGGCACCTGGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 90 bp GCCGCCTCAGCAGCTGTGTGGCCCCCAGAAAGCCCAGCCCAGAGCTaGCAGCCAGTGTCACGCAGAAAGCGCGGAAGGAGGAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: AASAAVWPPESPAQS*QPVSRRKRGRRRNP
Trigger: AGGATTTCTCCTCCTTCCGCGCTTTCTGCGTGACACTGGCTGTCAGCTCTGGGCTGGGCTTTCTGGGGGCCACACAGCTGCTGAGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 90 bp CGTAGACGCCCCAGCGCCGGCACAGGGACAGGAAGTAGAGGTTGTTaGGATGGGGAGCGACATAGGAGAGGCCCAACAGGATGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RRRPSAGTGTGSRGC*DGERHRRGPTGWSP
Trigger: CGGGCTCCATCCTGTTGGGCCTCTCCTATGTCGCTCCCCATCTCAACAACCTCTACTTCCTGTCCCTGTGCCGGCGCTGGGGCGTCTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 90 bp CTGCACCAGGTCCATGCTCACGAACCACAGGAAGTTCCGATGGCGTaGCAGCTGCCGGAGATACCGGCCCAAGGTGATGCTGTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LHQVHAHEPQEVPMA*QLPEIPAQGDAVRL
Trigger: GAGGCGGACAGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGACCTGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000469294.1
CDS GCA 90 bp GGTCTGGCCTGGCTTGGTCACCAAGGCAACCATGCCAAAGAGGAGTaGCGAGGCTGCCTGCTTGCGGTGGTTCAGCACCAGGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: GLAWLGHQGNHAKEE*RGCLLAVVQHQVLV
Trigger: GACGAGGACCTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp GAAACAGAGCAGCCAGGTGCCCAGCAGCGGGGCAAAGGTCTGGCCTaGCTTGGTCACCAAGGCAACCATGCCAAAGAGGAGTGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: ETEQPGAQQRGKGLA*LGHQGNHAKEECRG
Trigger: GCCTCGGCACTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCTTTGCCCCGCTGCTGGGCACCTGGCTGCTCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 90 bp AGGTCCATGCTCACGAACCACAGGAAGTTCCGATGGCGTGCCAGCTaGCGGAGATACCGGCCCAAGGTGATGCTGTCCGCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RSMLTNHRKFRWRAS*RRYRPKVMLSASSL
Trigger: CAGTGAGGAGGCGGACAGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000469294.1
CDS GCA 90 bp GACAGGTTCTGGCGCTGGGCCTTGACCATGTGCAGGCGTCTCCCATaGAGCGTGAACTGGGACCAGGTGAAGAGCTGCAGCAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: DRFWRWALTMCRRLP*SVNWDQVKSCSRAQ
Trigger: CTGTGCTCTGCTGCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 90 bp AGGGTTTGGGCCTGTGACAGGTTCTGGCGCTGGGCCTTGACCATGTaGAGGCGTCTCCCATGCAGCGTGAACTGGGACCAGGTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RVWACDRFWRWALTM*RRLPCSVNWDQVKS
Trigger: GCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp TGCACCTGCACCAGGTCCATGCTCACGAACCACAGGAAGTTCCGATaGCGTGCCAGCTGCCGGAGATACCGGCCCAAGGTGATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CTCTRSMLTNHRKFR*RASCRRYRPKVMLS
Trigger: GGACAGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGACCTGGTGCAGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369931.3
ENST00000469294.1
CDS-3UTR CAA 90 bp AGGCAGTGGAGCAGGGTGCTGGTAAAACTAGCTCCTGGCCGAGTGCGGTGGCTCCATATGGCCCAGCCCTaGCCCAAGCTGAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: RQWSRVLVKLAPGRVRWLHMAQP*PKLSQT
Trigger: TGTCTGGCTCAGCTTGGGCAAGGGCTGGGCCATATG...GAGCCACCGCACTCGGCCAGGAGCTAGTTTTACCAGCACCCTGCTCCACTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp AAGACCTGCACCAGGTCCATGCTCACGAACCACAGGAAGTTCCGATaGCGTGCCAGCTGCCGGAGATACCGGCCCAAGGTGATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KTCTRSMLTNHRKFR*RASCRRYRPKVMLS
Trigger: GGACAGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGACCTGGTGCAGGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp GTGAAGACGCGGTTGCTGGCAATGAAGAGGCACAGCAGGCTGAGGTaGTCCGGGCCGGCCAACAACATGAGCAGGCTAAGTCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VKTRLLAMKRHSRLR*SGPANNMSRLSPSL
Trigger: CAAGCTGGGACTTAGCCTGCTCATGTTGTTGGCCGGCCCGGACCACCTCAGCCTGCTGTGCCTCTTCATTGCCAGCAACCGCGTCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp CACAGCGGCCAGCTCCAGTCAGGCAGCGGGATGGGCTCCCACGCCCCATGGCAGCAGAAGGCCATTTTGTaGATCTTGTACACTGAGACA +
Preference number: 5 (lower is better)
Translates to: HSGQLQSGSGMGSHAPWQQKAIL*ILYTET
Trigger: TGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTG...CTGCCATGGGGCGTGGGAGCCCATCCCGCTGCCTGACTGGAGCTGGCCGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp TGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCACTCCTAAGGTCAGGGGTTaGAGACTAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: CFWLSPRSYPLPCLPGCTPKVRG*RLAWPT
Trigger: TGTTGGCCAGGCTAGTCTCAAACCCCTGACCTTAGG...AGTGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp ACCATCTTAACATCCAGGGTTTGGGCCTGTGACAGGTTCTGGCGCTaGGCCTTGACCATGTGCAGGCGTCTCCCATGCAGCGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: TILTSRVWACDRFWR*ALTMCRRLPCSVNW
Trigger: CCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 90 bp TCTCACACCATCTTAACATCCAGGGTTTGGGCCTGTGACAGGTTCTaGCGCTGGGCCTTGACCATGTGCAGGCGTCTCCCATGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SHTILTSRVWACDRF*RWALTMCRRLPCSV
Trigger: CACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGTGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp GGTGGACGGAGTGGGAGGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAACCGAAGAGGGGGTCATaGAGGCTGTTCCAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GGRSGRWDLQSAFPDWAKPKRGS*RLFQRR
Trigger: TCTCCTCTGGAACAGCCTCAATGACCCCCTCTTCGG...TTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACCTCCCACTCCGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp GATGCTTCTGGCTCAGCCCCAGGAGCTACCCGCTGCCATGTCTTCCAGGCTGCAAAGAGAGGGAAGAAGTaGCTGTTGAAGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: DASGSAPGATRCHVFQAAKRGKK*LLKWQW
Trigger: CCACTGCCACTTCAACAGCAACTTCTTCCCTCTCTT...TGCAGCCTGGAAGACATGGCAGCGGGTAGCTCCTGGGGCTGAGCCAGAAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp AAGGGAGCAGTTGCAGTATTAAAAGTGGTTCCTGAGTCCACCACAGCGGCCAGCTTCTGGCGCTGGGCCTaGACCATGTGCAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: KGAVAVLKVVPESTTAASFWRWA*TMCRRL
Trigger: GAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAA...GCTGGCCGCTGTGGTGGACTCAGGAACCACTTTTAATACTGCAACTGCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp CCCTGCAGCAGAGGAGGCATGCCACTTCAAGCACAGCTGAAGCAGAGAAACCTCCTCAGTGGGGTGACCTaGCCACAGCTCTCACACCAT +
Preference number: 5 (lower is better)
Translates to: PCSRGGMPLQAQLKQRNLLSGVT*PQLSHH
Trigger: ATGGTGTGAGAGCTGTGGCAAGGTCACCCCACTGAG...GAGGTTTCTCTGCTTCAGCTGTGCTTGAAGTGGCATGCCTCCTCTGCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS-3UTR CAA 90 bp GGTGGGACTTACAGTCAGCTTTCCCTGACTGGGCAAAAGGGAGCAGTTGCAGTATCAGTGAAGACGCGGTaGCTGGCAATGAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GGTYSQLSLTGQKGAVAVSVKTR*LAMKRH
Trigger: GTGCCTCTTCATTGCCAGCAACCGCGTCTTCACTGA...TACTGCAACTGCTCCCTTTTGCCCAGTCAGGGAAAGCTGACTGTAAGTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 90 bp GACTTTAATGGTCTAGACGGGACAACCCTGAGCTTGGGCACACAATaGACTTACAGTAAAACGTCAGGCAGTTACCCAACCCAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: DFNGLDGTTLSLGTQ*TYSKTSGSYPTQAL
Trigger: TAAGGCCTGGGTTGGGTAACTGCCTGACGTTTTACTGTAAGTGCATTGTGTGCCCAAGCTCAGGGTTGTCCCGTCTAGACCATTAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428200.1
CDS-3UTR CAA 90 bp TTGAACCTGGGTGGTGGTTTCAGTGAGCCCAGATTGCACCACTGCAACAGATCCACCCAGAAGGCCATTTaGTTGATCTTGTACACTGAG +
Preference number: 5 (lower is better)
Translates to: LNLGGGFSEPRLHHCNRSTQKAI*LILYTE
Trigger: CTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGT...GGATCTGTTGCAGTGGTGCAATCTGGGCTCACTGAAACCACCACCCAGGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 90 bp GGTAAATATCCTTGTAATCGGGCTCCTTCCTCAGGTAAGGGAATTTaGAAAGATGGGTCACACGAGGAAAAGTCAGAAGATGGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GKYPCNRAPSSGKGI*KDGSHEEKSEDGGR
Trigger: GCGGCCCCCATCTTCTGACTTTTCCTCGTGTGACCCATCTTTTCAAATTCCCTTACCTGAGGAAGGAGCCCGATTACAAGGATATTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238936.8
ENST00000369931.3
CDS TCA 90 bp CACTGTCTCTCCGACCCAGAAGGCCATTTTGTTGATCTTGTACACTaGGACAAAGGTGTCCACATAGTAGAGCAGGAAGACATTGTGCAG +
Preference number: 5 (lower is better)
Translates to: HCLSDPEGHFVDLVH*DKGVHIVEQEDIVQ
Trigger: CTGCACAATGTCTTCCTGCTCTACTATGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGTCGGAGAGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2
CDS TCA 90 bp TCCAGAGGAGAAACACTGTCTCTCCGACCCAGAAGGCCATTTTGTTaGTCTTGTACACTGAGACAAAGGTGTCCACATAGTAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SRGETLSLRPRRPFC*SCTLRQRCPHSRAG
Trigger: TCCTGCTCTACTATGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGTCGGAGAGACAGTGTTTCTCCTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2
CDS-3UTR CAA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTTGCAATCATAACTCATaGCAGCCTCGAACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VQPVYILHVLGTALSSSFCNHNS*QPRTPG
Trigger: CCCAGGAGTTCGAGGCTGCAATGAGTTATGATTGCA...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CAA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTACCCAGAAGGCCATTTaGTTGATCTTGTACACTGAG +
Preference number: 5 (lower is better)
Translates to: VQPVYILHVLGTALSSSFTQKAI*LILYTE
Trigger: CTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGT...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS-3UTR CAA 90 bp GTTCAGCCAGTTTATATACTGCATGTTTTAGGTACAGCACTTAGCTCTTCTTTTCAGAAGGCCATTTTGTaGATCTTGTACACTGAGACA +
Preference number: 5 (lower is better)
Translates to: VQPVYILHVLGTALSSSFQKAIL*ILYTET
Trigger: TGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTG...AAAAGAAGAGCTAAGTGCTGTACCTAAAACATGCAGTATATAAACTGGCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369931.3
CDS GCA 72 bp CAGAACGCCAGGAACGACAGCGCCAGCAGCGGCCCATaGCAGCCCAGGGCCTGCACCCGGGCCAGCACCACA +
Preference number: 6 (lower is better)
Translates to: QNARNDSASSGP*QPRACTRASTT
Trigger: TGTGGTGCTGGCCCGGGTGCAGGCCCTGGGCTGGCATGGGCCGCTGCTGGCGCTGTCGTTCCTGGCGTTCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp AGCCCGGCGCCTGACCGGGGCTGGGAGCTGAGGAACTaGCGGTCACTGAGCCAACCGAAGAGGGGGTCATTG +
Preference number: 6 (lower is better)
Translates to: SPAPDRGWELRN*RSLSQPKRGSL
Trigger: CAATGACCCCCTCTTCGGTTGGCTCAGTGACCGGCAGTTCCTCAGCTCCCAGCCCCGGTCAGGCGCCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 90 bp CAGAGCAGCCAGGTGCCCAGCAGCGGGGCAAAGGTCTGGCCTGGCTaGGTCACCAAGGCAACCATGCCAAAGAGGAGTGCCGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: QSSQVPSSGAKVWPG*VTKATMPKRSAEAA
Trigger: GGCAGCCTCGGCACTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCTTTGCCCCGCTGCTGGGCACCTGGCTGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 72 bp GGAGCAGTAGAAGTTGAGGTGGGTGCGGTCGTGGGCTaGGAGGGCCAGGTCGGCCAGCAAGGCATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GAVEVEVGAVVG*EGQVGQQGMVV
Trigger: CACCACCATGCCTTGCTGGCCGACCTGGCCCTCTCAGCCCACGACCGCACCCACCTCAACTTCTACTGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp CTCACGAACCACAGGAAGTTCCGATGGCGTGCCAGCTaGCGGAGATACCGGCCCAAGGTGATGCTGTCCGCC +
Preference number: 6 (lower is better)
Translates to: LTNHRKFRWRAS*RRYRPKVMLSA
Trigger: GGCGGACAGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000469294.1
CDS GCA 72 bp TGGCGCTGGGCCTTGACCATGTGCAGGCGTCTCCCATaGAGCGTGAACTGGGACCAGGTGAAGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WRWALTMCRRLP*SVNWDQVKSCS
Trigger: GCTGCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp GCCTGTGACAGGTTCTGGCGCTGGGCCTTGACCATGTaGAGGCGTCTCCCATGCAGCGTGAACTGGGACCAG +
Preference number: 6 (lower is better)
Translates to: ACDRFWRWALTM*RRLPCSVNWDQ
Trigger: CTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 72 bp CAGCCAGGTGCCCAGCAGCGGGGCAAAGGTCTGGCCTaGCTTGGTCACCAAGGCAACCATGCCAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: QPGAQQRGKGLA*LGHQGNHAKEE
Trigger: CTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCAGGCCAGACCTTTGCCCCGCTGCTGGGCACCTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 72 bp ACCAGGTCCATGCTCACGAACCACAGGAAGTTCCGATaGCGTGCCAGCTGCCGGAGATACCGGCCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: TRSMLTNHRKFR*RASCRRYRPKV
Trigger: CACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000469294.1
CDS CCA 72 bp ACATCCAGGGTTTGGGCCTGTGACAGGTTCTGGCGCTaGGCCTTGACCATGTGCAGGCGTCTCCCATGCAGC +
Preference number: 6 (lower is better)
Translates to: TSRVWACDRFWR*ALTMCRRLPCS
Trigger: GCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 72 bp GCAACCATGCCAAAGAGGAGTGCCGAGGCTGCCTGCTaGCGGTGGTTCAGCACCAGGTCCTCGTCTACCAGG +
Preference number: 6 (lower is better)
Translates to: ATMPKRSAEAAC*RWFSTRSSSTR
Trigger: CCTGGTAGACGAGGACCTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 72 bp AGGGTTTGGGCCTGTGACAGGTTCTGGCGCTGGGCCTaGACCATGTGCAGGCGTCTCCCATGCAGCGTGAAC +
Preference number: 6 (lower is better)
Translates to: RVWACDRFWRWA*TMCRRLPCSVN
Trigger: GTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS TCA 72 bp CCCAGCGCCGGCACAGGGACAGGAAGTAGAGGTTGTTaGGATGGGGAGCGACATAGGAGAGGCCCAACAGGA +
Preference number: 6 (lower is better)
Translates to: PSAGTGTGSRGC*DGERHRRGPTG
Trigger: TCCTGTTGGGCCTCTCCTATGTCGCTCCCCATCTCAACAACCTCTACTTCCTGTCCCTGTGCCGGCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp GTCCATGCTCACGAACCACAGGAAGTTCCGATGGCGTaGCAGCTGCCGGAGATACCGGCCCAAGGTGATGCT +
Preference number: 6 (lower is better)
Translates to: VHAHEPQEVPMA*QLPEIPAQGDA
Trigger: AGCATCACCTTGGGCCGGTATCTCCGGCAGCTGGCACGCCATCGGAACTTCCTGTGGTTCGTGAGCATGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000469294.1
CDS GCA 72 bp CAACCATGCCAAAGAGGAGTGCCGAGGCTGCCTGCTTaGGGTGGTTCAGCACCAGGTCCTCGTCTACCAGGT +
Preference number: 6 (lower is better)
Translates to: QPCQRGVPRLPA*GGSAPGPRLPG
Trigger: ACCTGGTAGACGAGGACCTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp AAGGCAACCATGCCAAAGAGGAGTGCCGAGGCTGCCTaGTTGCGGTGGTTCAGCACCAGGTCCTCGTCTACC +
Preference number: 6 (lower is better)
Translates to: KATMPKRSAEAA*LRWFSTRSSST
Trigger: GGTAGACGAGGACCTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATGGTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp TGGCTTGGTCACCAAGGCAACCATGCCAAAGAGGAGTaGCGAGGCTGCCTGCTTGCGGTGGTTCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: WLGHQGNHAKEE*RGCLLAVVQHQ
Trigger: CTGGTGCTGAACCACCGCAAGCAGGCAGCCTCGGCACTCCTCTTTGGCATGGTTGCCTTGGTGACCAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 72 bp CGGTTGCTGGCAATGAAGAGGCACAGCAGGCTGAGGTaGTCCGGGCCGGCCAACAACATGAGCAGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: RLLAMKRHSRLR*SGPANNMSRLS
Trigger: ACTTAGCCTGCTCATGTTGTTGGCCGGCCCGGACCACCTCAGCCTGCTGTGCCTCTTCATTGCCAGCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 90 bp TTAACATCCAGGGTTTGGGCCTGTGACAGGTTCTGGCGCTGGGCCTaGACCATGTGCAGGCGTCTCCCATGCAGCGTGAACTGGGACCAG +
Preference number: 6 (lower is better)
Translates to: LTSRVWACDRFWRWA*TMCRRLPCSVNWDQ
Trigger: CTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 90 bp GAGCTGAGGAACTGCCGGTCACTGAGCCAACCGAAGAGGGGGTCATaGAGGCTGTTCCAGAGGAGAAACACTGTCTCTCCGACCCAGAAG +
Preference number: 6 (lower is better)
Translates to: ELRNCRSLSQPKRGS*RLFQRRNTVSPTQK
Trigger: CTTCTGGGTCGGAGAGACAGTGTTTCTCCTCTGGAACAGCCTCAATGACCCCCTCTTCGGTTGGCTCAGTGACCGGCAGTTCCTCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238936.8
ENST00000369931.3
CDS CCA 72 bp ATCTTAACATCCAGGGTTTGGGCCTGTGACAGGTTCTaGCGCTGGGCCTTGACCATGTGCAGGCGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: ILTSRVWACDRF*RWALTMCRRLP
Trigger: TGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 72 bp TGCCACAGCTCTCACACCATCTTAACATCCAGGGTTTaGGCCTGTGACAGGTTCTGGCGCTGGGCCTTGACC +
Preference number: 6 (lower is better)
Translates to: CHSSHTILTSRV*ACDRFWRWALT
Trigger: GGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGTGTGAGAGCTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CCA 72 bp AGGCCCAACAGGATGGAGCCCGTGGAAAGGGAGATATaGTCGGACAACAGATGCTCCAGGAAGAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: RPNRMEPVEREI*SDNRCSRKRGK
Trigger: CTTCCCTCTCTTCCTGGAGCATCTGTTGTCCGACCATATCTCCCTTTCCACGGGCTCCATCCTGTTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS CAA 72 bp AACTGCCGGTCACTGAGCCAACCGAAGAGGGGGTCATaGAGGCTGTTCCAGAGGAGAAACACTGTCTCTCCG +
Preference number: 6 (lower is better)
Translates to: NCRSLSQPKRGS*RLFQRRNTVSP
Trigger: CGGAGAGACAGTGTTTCTCCTCTGGAACAGCCTCAATGACCCCCTCTTCGGTTGGCTCAGTGACCGGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238936.8
ENST00000369931.3
CDS CCA 72 bp TGCTCCAGGAAGAGAGGGAAGAAGTTGCTGTTGAAGTaGCAGTGGAAGACCTGCACCAGGTCCATGCTCACG +
Preference number: 6 (lower is better)
Translates to: CSRKRGKKLLLK*QWKTCTRSMLT
Trigger: CGTGAGCATGGACCTGGTGCAGGTCTTCCACTGCCACTTCAACAGCAACTTCTTCCCTCTCTTCCTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238936.8
CDS GCA 72 bp GGTCTAGACGGGACAACCCTGAGCTTGGGCACACAATaGACTTACAGTAAAACGTCAGGCAGTTACCCAACC +
Preference number: 6 (lower is better)
Translates to: GLDGTTLSLGTQ*TYSKTSGSYPT
Trigger: GGTTGGGTAACTGCCTGACGTTTTACTGTAAGTGCATTGTGTGCCCAAGCTCAGGGTTGTCCCGTCTAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428200.1
CDS CAA 72 bp TGTGACTTTAATGGTCTAGACGGGACAACCCTGAGCTaGGGCACACAATGCACTTACAGTAAAACGTCAGGC +
Preference number: 6 (lower is better)
Translates to: CDFNGLDGTTLS*GTQCTYSKTSG
Trigger: GCCTGACGTTTTACTGTAAGTGCATTGTGTGCCCAAGCTCAGGGTTGTCCCGTCTAGACCATTAAAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428200.1
CDS CAA 90 bp ATTGCACTGTGTGACTTTAATGGTCTAGACGGGACAACCCTGAGCTaGGGCACACAATGCACTTACAGTAAAACGTCAGGCAGTTACCCA +
Preference number: 6 (lower is better)
Translates to: IALCDFNGLDGTTLS*GTQCTYSKTSGSYP
Trigger: TGGGTAACTGCCTGACGTTTTACTGTAAGTGCATTGTGTGCCCAAGCTCAGGGTTGTCCCGTCTAGACCATTAAAGTCACACAGTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428200.1
CDS TCA 72 bp TCCGACCCAGAAGGCCATTTTGTTGATCTTGTACACTaGGACAAAGGTGTCCACATAGTAGAGCAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: SDPEGHFVDLVH*DKGVHIVEQED
Trigger: GTCTTCCTGCTCTACTATGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2
CDS CAA 72 bp AGGAGAAACACTGTCTCTCCGACCCAGAAGGCCATTTaGTTGATCTTGTACACTGAGACAAAGGTGTCCACA +
Preference number: 6 (lower is better)
Translates to: RRNTVSPTQKAI*LILYTETKVST
Trigger: TGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGTCGGAGAGACAGTGTTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2
CDS TCA 72 bp CCTTGTAATCGGGCTCCTTCCTCAGGTAAGGGAATTTaGAAAGATGGGTCACACGAGGAAAAGTCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: PCNRAPSSGKGI*KDGSHEEKSED
Trigger: ATCTTCTGACTTTTCCTCGTGTGACCCATCTTTTCAAATTCCCTTACCTGAGGAAGGAGCCCGATTACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2
CDS TCA 72 bp GAAACACTGTCTCTCCGACCCAGAAGGCCATTTTGTTaGTCTTGTACACTGAGACAAAGGTGTCCACATAGT +
Preference number: 6 (lower is better)
Translates to: ETLSLRPRRPFC*SCTLRQRCPHS
Trigger: ACTATGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAATGGCCTTCTGGGTCGGAGAGACAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238936.8
ENST00000369931.3
ENST00000450947.2