RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFSD12 (Homo sapiens)

Ensembl gene IDs: ENSG00000161091

Ensembl transcript IDs: ENST00000355415.7, ENST00000389395.7, ENST00000398558.8, ENST00000585788.1, ENST00000585814.1, ENST00000586402.1, ENST00000588626.1, ENST00000588918.5, ENST00000589063.5, ENST00000589157.1, ENST00000589995.1, ENST00000591878.1, ENST00000615073.4

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGCTCCTCCGCATGCGGCCGGCGCCTCTCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACGGCGCCGACACCCACCACCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PGSSACGRRLSRVPR*NSSENTAPTPTTSR
Trigger: CCTGCTGGTGGTGGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCCGGCCGCATGCGGAGGAGCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR GCA 90 bp TATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGCTaGCCACCACGGTGGGGTCCAGGCCCAGCCCACCACCCCGTGGCT +
Preference number: 1 (lower is better)
Translates to: YLLPAESTKPAGQPC*PPRWGPGPAHHPVA
Trigger: AGCCACGGGGTGGTGGGCTGGGCCTGGACCCCACCGTGGTGGGCAGCAGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR GCA 90 bp TGTGCTCGCCTGGCTCCTCCGCATGCGGCCGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTGAGAACACGGCGCCGACACCCACCA +
Preference number: 1 (lower is better)
Translates to: CARLAPPHAAGASPG*PGGIAVRTRRRHPP
Trigger: TGGTGGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCCGGCCGCATGCGGAGGAGCCAGGCGAGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR TCA 90 bp GGTGGGAGATCTGTGTGGAGGCCCAGCCAAACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGAGGGCAGCCCACTCGGGCGTGGCCG +
Preference number: 1 (lower is better)
Translates to: GGRSVWRPSQTGRSR*TGRSRGGQPTRAWP
Trigger: CGGCCACGCCCGAGTGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR CCA 90 bp CCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTaGATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCG +
Preference number: 1 (lower is better)
Translates to: PPPQSRHPRILSLIL*IGLSWTFHRSGITA
Trigger: CGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR CCA 90 bp ACCTTCTCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTaGGAGATCTGTGTGGAGGCCCAGCCAAACTGGAAGATCACGATG +
Preference number: 1 (lower is better)
Translates to: TFSWSLVTSSGMRLR*EICVEAQPNWKITM
Trigger: CATCGTGATCTTCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR-3UTR CCA 90 bp GTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGCAGCAGGGGGTGTGCTCGCCTaGCTCCTCCGCATGCGGCCG +
Preference number: 2 (lower is better)
Translates to: VCPPGRKPAPGASASRAAGGVLA*LLRMRP
Trigger: CGGCCGCATGCGGAGGAGCCAGGCGAGCACACCCCC...TGCTGCTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGGCGGGCATCCCTGCTaGCCTCACCCGACCCCACCC +
Preference number: 2 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPGGHPC*PHPTPP
Trigger: GGGTGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCC...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR GCA 90 bp GTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGCAGCAACCCGCGACGAGCCCTaGAGGTGCAGCAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: VCPPGRKPAPGASASRAATRDEP*RCSRSQ
Trigger: CTGGCTCCTGCTGCACCTGCAGGGCTCGTCGCGGGT...TGCTGCTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR CCA 90 bp CGCCTCTCCCGGGTGCCCAGGTGGAATAGCAGTGAGAACACGGCGCCGACACCCCTGATGCTGATGTCTTaGGTGGGCTCCACCCGCGAC +
Preference number: 2 (lower is better)
Translates to: RLSRVPRWNSSENTAPTPLMLMS*VGSTRD
Trigger: GTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAG...GGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTCCTGGCGGGCATCCCTaGTGCCCTCACCCGACCCCA +
Preference number: 2 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPPGGHP*CPHPTP
Trigger: TGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCCAGG...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGCGGGCATCCCTGCTaGCCTCACCCGACCCCACCC +
Preference number: 2 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRGGHPC*PHPTPP
Trigger: GGGTGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR GCA 90 bp CTTGGGCAGGTGGAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTG +
Preference number: 2 (lower is better)
Translates to: LGQVERVGEVHGHVGLGQGASPG*PGGIAV
Trigger: CACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCC...CTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTCCACCTGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCCTGGCGGGCATCCCTaGTGCCCTCACCCGACCCCA +
Preference number: 2 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRPGGHP*CPHPTP
Trigger: TGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCCAGG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CCA 90 bp GGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTTCCCCTCACCTTCACTaGGTGTTCGGTGTTCTCCGC +
Preference number: 2 (lower is better)
Translates to: GPPPQSRHPRILSLILWISPHLH*VFGVLR
Trigger: GCGGAGAACACCGAACACCCAGTGAAGGTGAGGGGA...AATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGATCCGCACTGTGGCCTaGGTCAGAGCTTCGCACCTC +
Preference number: 2 (lower is better)
Translates to: PPQSRHPRILSLILWIGLIRTVA*VRASHL
Trigger: GAGGTGCGAAGCTCTGACCCAGGCCACAGTGCGGAT...CAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp GTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGCAGCATCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACG +
Preference number: 2 (lower is better)
Translates to: VCPPGRKPAPGASASRAASRVPR*NSSENT
Trigger: CGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGA...TGCTGCTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR GCA 90 bp AGGGGAAGGACAGCAGGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGAGGCCAGGAGTTCGAGGTTaGAGTGAGCTGAGATCCGAT +
Preference number: 2 (lower is better)
Translates to: RGRTAGRRRCLWSQLLERPGVRG*SELRSD
Trigger: ATCGGATCTCAGCTCACTGCAACCTCGAACTCCTGG...CCTCTCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCCTGCTGTCCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR-3UTR CCA 90 bp CTTCTCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTACACTCCAGCCCAATaGGACCGTTCGCCGAGGCCT +
Preference number: 2 (lower is better)
Translates to: LLMVVGDELRDEAEVGDLYTPAQ*DRSPRP
Trigger: AGGCCTCGGCGAACGGTCCCATTGGGCTGGAGTGTA...CAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTTCCCCACAGTTCCCTTaGACAGGTGCAGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPSPQFP*TGAGGC
Trigger: ACAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGA...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTCTACTTCCTGTTCCCTaGCGAGAGGGGCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPLLPVP*REGHPK
Trigger: TTTGGGGTGCCCCTCTCGGCAGGGAACAGGAAGTAG...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGTCCTTGCAAGTCCCTaGCGGGCATCCCTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPVLASP*RASLLP
Trigger: GGGCAGCAGGGATGCCCGCCAGGGACTTGCAAGGAC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CCA 90 bp GGCGTTCAGTACCTTCACCACGCCGTGCAGCCATCCCATCTGATTCCAGAACATGGTGCATCCGCACTGTaGCCTGGGTCAGAGCTTCGC +
Preference number: 2 (lower is better)
Translates to: GVQYLHHAVQPSHLIPEHGASAL*PGSELR
Trigger: GCGAAGCTCTGACCCAGGCCACAGTGCGGATGCACC...ATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTGAAGGTACTGAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTAACCCAGGGGGTCCTTaGAAGTCCCTGGCGGGCATC +
Preference number: 2 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPNPGGP*KSLAGI
Trigger: GATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR TCA 90 bp TCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTGTGAGCAGGAGAATCACTTaGGCCCAGGAGTTCGAGGTT +
Preference number: 2 (lower is better)
Translates to: SWSLVTSSGMRLRWEICVSRRIT*AQEFEV
Trigger: AACCTCGAACTCCTGGGCTCAAGTGATTCTCCTGCT...CACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR-3UTR GCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCCCACAGTTCCCTTaGACAGGTGCAGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGSPQFP*TGAGGC
Trigger: ACAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGA...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CCA 90 bp GCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTATCCGCACTGTGGCCTaGGTCAGAGCTTCGCACCTC +
Preference number: 2 (lower is better)
Translates to: AAIPSDSRTFSSPRRQPCIRTVA*VRASHL
Trigger: GAGGTGCGAAGCTCTGACCCAGGCCACAGTGCGGAT...ACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR TCA 90 bp CTGTGTGGAGGCCCAGCCAAACTGGAAGATCACGATGAACGGGCCGTAGTAGAGGAGGTTGCAGTGAGCTaGGATCCGATGACTACACTC +
Preference number: 2 (lower is better)
Translates to: LCGGPAKLEDHDERAVVEEVAVS*DPMTTL
Trigger: GAGTGTAGTCATCGGATCTCAGCTCACTGCAACCTC...CTCTACTACGGCCCGTTCATCGTGATCTTCCAGTTTGGCTGGGCCTCCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTCCCCACAGTTCCCTTaGACAGGTGCAGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRSPQFP*TGAGGC
Trigger: ACAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CCA 90 bp GGATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGGGTGCATCCGCACTGTaGCCTGGGTCAGAGCTTCGC +
Preference number: 2 (lower is better)
Translates to: GLVCPGHFIEVGSQRTLLGASAL*PGSELR
Trigger: GCGAAGCTCTGACCCAGGCCACAGTGCGGATGCACC...CAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR GCA 90 bp ATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATGTCACCTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGG +
Preference number: 2 (lower is better)
Translates to: IPEHSHHPEGSPVPIMSPAAVSH*VQVSSW
Trigger: CCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGC...AGGTGACATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398558.8
3UTR-3UTR GCA 90 bp CAGGTGGAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACTGGTCATGTACAGTATaGCCACCTGGTAGAAAGCCG +
Preference number: 2 (lower is better)
Translates to: QVERVGEVHGHVGLGQVHWSCTV*PPGRKP
Trigger: CGGCTTTCTACCAGGTGGGCATACTGTACATGACCA...GTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR CCA 90 bp ATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATGTCACCTTCCCCTCACCTTCACTaGGTGTTCGGTGTTCTCCGC +
Preference number: 2 (lower is better)
Translates to: IPEHSHHPEGSPVPIMSPSPHLH*VFGVLR
Trigger: GCGGAGAACACCGAACACCCAGTGAAGGTGAGGGGA...AGGTGACATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp GCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTGTACCCTTCTGTGTCTaGTGTCTCTCACTGAGCGTG +
Preference number: 2 (lower is better)
Translates to: AAIPSDSRTFSSPRRQPCVPFCV*CLSLSV
Trigger: CACGCTCAGTGAGAGACACCAGACACAGAAGGGTAC...ACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCTCTCCCTGATTCTGTaGATTGGTCTGTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: QPSHLIPEHSHHPEGSPVLSLIL*IGLSWT
Trigger: TGTCCAGGACAGACCAATCCACAGAATCAGGGAGAG...GACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGTCCTGGACATTTCATGTACCCTTCTGTGTCTaGTGTCTCTCACTGAGCGTG +
Preference number: 2 (lower is better)
Translates to: HPRILSLILWIGLSWTFHVPFCV*CLSLSV
Trigger: CACGCTCAGTGAGAGACACCAGACACAGAAGGGTAC...ATGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp GTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTTGGATTGGTCTGTCCTaGACATTTCATAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VQPSHLIPEHSHHPEGSPWIGLS*TFHRSG
Trigger: CCCACTTCTATGAAATGTCCAGGACAGACCAATCCA...AGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CACCACGCCGTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAACCTGATTCTGTGGATTaGTCTGTCCTGGACATTTCA +
Preference number: 2 (lower is better)
Translates to: HHAVQPSHLIPEHSHHPEPDSVD*SVLDIS
Trigger: TGAAATGTCCAGGACAGACCAATCCACAGAATCAGG...TTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATTGGATTGGTCTGTCCTaGACATTTCATAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: PSDSRTFSSPRRQPCPHYWIGLS*TFHRSG
Trigger: CCCACTTCTATGAAATGTCCAGGACAGACCAATCCA...ATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CCA 90 bp CCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATCCTGATTCTGTGGATTaGTCTGTCCTGGACATTTCA +
Preference number: 2 (lower is better)
Translates to: PSDSRTFSSPRRQPCPHYPDSVD*SVLDIS
Trigger: TGAAATGTCCAGGACAGACCAATCCACAGAATCAGG...ATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR GCA 72 bp CTGGCTCCTCCGCATGCGGCCGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTGAGAACACGGCGCCGA +
Preference number: 3 (lower is better)
Translates to: LAPPHAAGASPG*PGGIAVRTRRR
Trigger: TCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCCGGCCGCATGCGGAGGAGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR CCA 72 bp TCCGCATGCGGCCGGCGCCTCTCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACGGCGCCGACACCCACC +
Preference number: 3 (lower is better)
Translates to: SACGRRLSRVPR*NSSENTAPTPT
Trigger: GGTGGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCCGGCCGCATGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR TCA 72 bp GGCCCTGGCAGTGTCTGGAGACCCCCAGGCTGGAGGTaGGGGGTGAACTGGACTGAGCTCAGGGTTAGGGTT +
Preference number: 3 (lower is better)
Translates to: GPGSVWRPPGWR*GVNWTELRVRV
Trigger: AACCCTAACCCTGAGCTCAGTCCAGTTCACCCCTCACCTCCAGCCTGGGGGTCTCCAGACACTGCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355415.7
3UTR TCA 72 bp TCTGTGTGGAGGCCCAGCCAAACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGAGGGCAGCCCACTCGG +
Preference number: 3 (lower is better)
Translates to: SVWRPSQTGRSR*TGRSRGGQPTR
Trigger: CCGAGTGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGTTTGGCTGGGCCTCCACACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
3UTR CCA 72 bp AGCGTGACATCCTCAAGGTGCATCCGCACTGTGGCCTaGGTCAGAGCTTCGCACCTCCTTGTGGCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: SVTSSRCIRTVA*VRASHLLVAES
Trigger: AGACTCAGCCACAAGGAGGTGCGAAGCTCTGACCCAGGCCACAGTGCGGATGCACCTTGAGGATGTCACGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR-3UTR CAA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACAGTCCCCACAGTTCCCTaGCACAGGTGCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTVPTVP*HRCRRL
Trigger: CAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGAC...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CAA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGGTCCCCACAGTTCCCTaGCACAGGTGCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGVPTVP*HRCRRL
Trigger: CAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGAC...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CAA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACAAAACCCAGGGGGTCCTaGCAAGTCCCTGGCGGGCAT +
Preference number: 3 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTKPRGS*QVPGGH
Trigger: ATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTTT...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR-3UTR CAA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGTCCCCACAGTTCCCTaGCACAGGTGCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPVPTVP*HRCRRL
Trigger: CAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGAC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR TCA 72 bp CCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTaGTTCTGTGGATTGGTCTGTCCTGGACATTTCATA +
Preference number: 3 (lower is better)
Translates to: PLPSPGTHESSP*FCGLVCPGHFI
Trigger: TATGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
3UTR TCA 72 bp GGTACATGGCCATGTAGGTCTGGGACAGGTTCACGATaGGCCTGGTGGTCATGTACAGTATGCCCACCTGGT +
Preference number: 3 (lower is better)
Translates to: GTWPCRSGTGSR*AWWSCTVCPPG
Trigger: ACCAGGTGGGCATACTGTACATGACCACCAGGCTCATCGTGAACCTGTCCCAGACCTACATGGCCATGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
3UTR-3UTR CAA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTTGGGATGGATTAGAGTaGAGAATGGGACACCCTCAA +
Preference number: 3 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPWDGLE*RMGHPQ
Trigger: TTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCA...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
3UTR TCA 72 bp TTCAGTACCTTCACCACGCCGTGCAGCCATCCCATCTaGTTCCAGAACATTCTCATCACCCAGAAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: FSTFTTPCSHPI*FQNILITQKAA
Trigger: GGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTGAAGGTACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GCCCACTCGGGCGTGGCCGCCCCACAGCCCAGGCAGGGGCTGAAGATGAAGGGGCTGCGGGCGGTTGGTTaGAGCGTCGCGCAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AHSGVAAPQPRQGLKMKGLRAVG*SVAQSG
Trigger: TCCCGACTGCGCGACGCTCCAACCAACCGCCCGCAG...CCCCTTCATCTTCAGCCCCTGCCTGGGCTGTGGGGCGGCCACGCCCGAGTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR GCA 90 bp CCCCAGCTGGTCGCTGATGCTGATGTCTTGGGTGGGCTCCACCCGCGACGAGCCACCCGCGACGAGCCCTaGAGGTGCAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQLVADADVLGGLHPRRATRDEP*RCSRSQ
Trigger: CTGGCTCCTGCTGCACCTGCAGGGCTCGTCGCGGGT...GGCTCGTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAGCGACCAGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp CGCCTCTCCCGGGTGCCCAGGTGGAATAGCAGTGAGAACACGGCGCCGACACCCGCCTCCTCGGGCTCATaGACTCTCGCTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLSRVPRWNSSENTAPTPASSGS*TLAAAP
Trigger: CGGGGCTGCAGCGAGAGTGCATGAGCCCGAGGAGGC...GGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp GGCGCCTCTCCCGGGTGCCCAGGTGGAATAGCAGTGAGAACACGGCGCCGACACGGAGGTGAGAGTCCCTaGGCTGAGCTGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GASPGCPGGIAVRTRRRHGGESP*AELGEA
Trigger: GGCCTCCCCCAGCTCAGCGCAGGGACTCTCACCTCC...GTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp CCCCAGCTGGTCGCTGATGCTGATGTCTTGGGTGGGCTCCACCCGCGACGAGCCTGCCCCATCAGACCCTaGCTCCTCGGGCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: PQLVADADVLGGLHPRRACPIRP*LLGLMH
Trigger: GTGCATGAGCCCGAGGAGGCAGGGTCTGATGGGGCA...GGCTCGTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAGCGACCAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp GTACAGTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGGGGGGTGTGCTCGCCTaGCTCCTCCGCATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VQYAHLVESRLPEPVLPEGGVLA*LLRMRP
Trigger: CGGCCGCATGCGGAGGAGCCAGGCGAGCACACCCCC...CTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATACTGTAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp CCCCAGCTGGTCGCTGATGCTGATGTCTTGGGTGGGCTCCACCCGCGACGAGCCATGGGGGCTTCGTGGTaGCTGTCAAGCAAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PQLVADADVLGGLHPRRAMGASW*LSSKSA
Trigger: CGCGCTCTTGCTTGACAGTCACCACGAAGCCCCCAT...GGCTCGTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAGCGACCAGCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp CATGCGGCCGGCGCCTCTCCCGGGTGCCCAGGTGGAATAGCAGTGAGAACACGGCTGATGCTGATGTCTTaGGTGGGCTCCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: HAAGASPGCPGGIAVRTRLMLMS*VGSTRD
Trigger: GTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAG...CCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCCGGCCGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGGGGGTGTGCTCGCCTaGCTCCTCCGCATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPGGVLA*LLRMRP
Trigger: CGGCCGCATGCGGAGGAGCCAGGCGAGCACACCCCC...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGAGGCTGAAGCAGGAGAATCGGGCTGCGGGCGGTTaGTTGGAGCGTCGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: GRRRCLWSQLLERLKQENRAAGG*LERRAV
Trigger: GACTGCGCGACGCTCCAACCAACCGCCCGCAGCCCG...ATTCTCCTGCTTCAGCCTCTCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR TCA 90 bp GCCCACTCGGGCGTGGCCGCCCCACAGCCCAGGCAGGGGCTGAAGATGAAGGGGAAGTTTCTTTGGAGGTaGAAACAGCCGCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: AHSGVAAPQPRQGLKMKGKFLWR*KQPRNS
Trigger: GGAGTTCCGCGGCTGTTTTCACCTCCAAAGAAACTT...CCCCTTCATCTTCAGCCCCTGCCTGGGCTGTGGGGCGGCCACGCCCGAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR GCA 90 bp AGGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATCAGCAGCACAGCCGCTaGGTACACGGCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: RSPSPVPAPTNPLPDSVDQQHSR*VHGHTQ
Trigger: CTGGGTGTGGCCGTGTACGCAGCGGCTGTGCTGCTG...ATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS-3UTR GCA 90 bp ATGAAGGGGAAGGACAGCAGGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGCCTCCTCGGGCTCATaGACTCTCGCTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: MKGKDSRTQTVPVVPTARASSGS*TLAAAP
Trigger: CGGGGCTGCAGCGAGAGTGCATGAGCCCGAGGAGGC...TCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCCTGCTGTCCTTCCCCTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR CCA 90 bp CGCCTCTCCCGGGTGCCCAGGTGGAATAGCAGTGAGAACACGGCGCCGACACCCTCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACG +
Preference number: 4 (lower is better)
Translates to: RLSRVPRWNSSENTAPTPSRVPR*NSSENT
Trigger: CGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGA...GGGTGTCGGCGCCGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGAGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp GGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTGCTCCGCTGTTCGTGTaGGGACCGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GPPPQSRHPRILSLILWIAPLFV*GPMRSA
Trigger: GGCCGACCTCATCGGTCCCCACACGAACAGCGGAGC...AATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GGCGCCGTAGACGGTGATGTTGGCCACCACGGTGAACGCATACCTGAGTGCCGTGGCTCCGGGCCAGCATaGGGGCTTCGTGGTGACTGT +
Preference number: 4 (lower is better)
Translates to: GAVDGDVGHHGERIPECRGSGPA*GLRGDC
Trigger: ACAGTCACCACGAAGCCCCCATGCTGGCCCGGAGCC...ACGGCACTCAGGTATGCGTTCACCGTGGTGGCCAACATCACCGTCTACGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp GGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTTCATGGCCAGCGAGGTaGCGAGGATGGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GPPPQSRHPRILSLILWISWPAR*RGWWHS
Trigger: GCTGTGCCACCATCCTCGTCACCTCGCTGGCCATGA...AATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR GCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACAACGGTGCCGACCAGGTaGCAGGCCTTGCGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTTVPTR*QALRGP
Trigger: CGGCCCGCGCAAGGCCTGGCACCTGGTCGGCACCGT...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355415.7
CDS-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTACCCGCGACGAGCCCTaGAGGTGCAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPTRDEP*RCSRSQ
Trigger: CTGGCTCCTGCTGCACCTGCAGGGCTCGTCGCGGGT...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGCGGGCATCCCTGCTaGCCTCACCCGACCCCACCC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGGGHPC*PHPTPP
Trigger: GGGTGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGCCTGCCGGGCAGCCCTaGTGCCCACCACGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGPAGQP*CPPRWG
Trigger: ACCCCACCGTGGTGGGCAGCAGGGCTGCCCGGCAGG...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCTGCCGGGCAGCCCTaGTGCCCACCACGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTPAGQP*CPPRWG
Trigger: ACCCCACCGTGGTGGGCAGCAGGGCTGCCCGGCAGG...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGAGGCTGAAGCAGGAGAATGCCCCCATCAGACCCTaGCTCCTCGGGCTCATGCAC +
Preference number: 4 (lower is better)
Translates to: GRRRCLWSQLLERLKQENAPIRP*LLGLMH
Trigger: GTGCATGAGCCCGAGGAGGCAGGGTCTGATGGGGGC...ATTCTCCTGCTTCAGCCTCTCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR GCA 90 bp GACGGTGATGTTGGCCACCACGGTGAACGCATACCTGAGTGCCGTGAGCTCCACGCAGGACGCAGACGGTaGCCCATCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DGDVGHHGERIPECRELHAGRRR*PIRPCL
Trigger: GAGGCAGGGTCTGATGGGGCACCGTCTGCGTCCTGC...GTGGAGCTCACGGCACTCAGGTATGCGTTCACCGTGGTGGCCAACATCACCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTCCGCGGAGGGTACCCTaGCCAGGCCTTCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPPRRVP*PGLLGC
Trigger: GCACCCAAGAAGGCCTGGCCAGGGTACCCTCCGCGG...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTGCGTGCAGGTCTCGGTGCATCCGCACTGTaGCCTGGGTCAGAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SASGCHKSCCCEPLRAGLGASAL*PGSELR
Trigger: GCGAAGCTCTGACCCAGGCCACAGTGCGGATGCACC...GAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GTACAGTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGGGGAGGGGAGATTCTTaGGACGGGGCTGACCGCGGT +
Preference number: 4 (lower is better)
Translates to: VQYAHLVESRLPEPVLPEGRGDS*DGADRG
Trigger: ACCGCGGTCAGCCCCGTCCCAAGAATCTCCCCTCCC...CTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATACTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp AGCTGGTCGCTGATGCTGATGTCTTGGGTGGGCTCCACCCGCGACGAGCCCTGCAGGACAAGAAGCCGCTaGGGTACATCACCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SWSLMLMSWVGSTRDEPCRTRSR*GTSPGE
Trigger: TTCCCCTGGTGATGTACCTCAGCGGCTTCTTGTCCT...GCAGGGCTCGTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAGCGACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp AGCTGGTCGCTGATGCTGATGTCTTGGGTGGGCTCCACCCGCGACGAGCCCTGCGAACGCATACCTGAGTaGCGTGAGCTCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: SWSLMLMSWVGSTRDEPCERIPE*RELHLL
Trigger: GAGAAGGTGGAGCTCACGGCACTCAGGTATGCGTTC...GCAGGGCTCGTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAGCGACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGGCGGGCATCCCTGCTaGCCTCACCCGACCCCACCC +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPGGHPC*PHPTPP
Trigger: GGGTGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CTCCACCTTCTCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGCAGGACGCAGACGGTaGCTGTGGTCCCAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLLMVVGDELRDEAEVGAGRRR*LWSQLL
Trigger: GAGCAGTTGGGACCACAGGCACCGTCTGCGTCCTGC...TCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR CCA 90 bp GAAGATCACGATGAACGGGCCGTAGTAGAGGAGGGCAGCCCACTCGGGCGTGGCGGTGGGAGATCTGTGTaGAGGCCCAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: EDHDERAVVEEGSPLGRGGGRSV*RPSQTG
Trigger: TCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC...GCCACGCCCGAGTGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCGGGGGTGTGCTCGCCTaGCTCCTCCGCATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSGGVLA*LLRMRP
Trigger: CGGCCGCATGCGGAGGAGCCAGGCGAGCACACCCCC...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGGGGGTGTGCTCGCCTaGCTCCTCCGCATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPGGVLA*LLRMRP
Trigger: CGGCCGCATGCGGAGGAGCCAGGCGAGCACACCCCC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTGCGTGCAGGTCTCCAAGGGTGCAGGCTCTaGATGGCCATGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SASGCHKSCCCEPLRAGLQGCRL*MAMTAS
Trigger: GCTGGCAGTCATGGCCATCCAGAGCCTGCACCCTTG...GAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGTCCTTGCAAGTCCCTaGCGGGCATCCCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPVLASP*RASLLP
Trigger: GGGCAGCAGGGATGCCCGCCAGGGACTTGCAAGGAC...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTTCATGGCCAGCGAGGTaGCGAGGATGGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPSWPAR*RGWWHS
Trigger: GCTGTGCCACCATCCTCGTCACCTCGCTGGCCATGA...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGTCGCGATGAACTTCTTGGGCAGGTGGAGCGAGTAGGTGAGGTACATGGCCATGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRDELLGQVERVGEVHGHGASPG*PGGIAV
Trigger: CACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCC...ATGGCCATGTACCTCACCTACTCGCTCCACCTGCCCAAGAAGTTCATCGCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCCTGGCGGGCATCCCTaGTGCCCTCACCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPPGGHP*CPHPTP
Trigger: TGGGGTCGGGTGAGGGCAGCAGGGATGCCCGCCAGG...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACGATGAGCTCATGCACTCTCGCTaGAGCCCCGCCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ERVGEVHGHVGLGQVHDELMHSR*SPAVGG
Trigger: ACCCCCGACGGCGGGGCTGCAGCGAGAGTGCATGAG...CTCATCGTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCTGGCCAGGCCTTCTTaGGTGCCGTGGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPLARPS*VPWGQA
Trigger: CGCCTGCCCCCACGGCACCCAAGAAGGCCTGGCCAG...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCTGGCCAGGCCTTCTTaGGTGCCGTGGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSLARPS*VPWGQA
Trigger: CGCCTGCCCCCACGGCACCCAAGAAGGCCTGGCCAG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCCGCGGAGGGTACCCTaGCCAGGCCTTCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGPRRVP*PGLLGC
Trigger: GCACCCAAGAAGGCCTGGCCAGGGTACCCTCCGCGG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGACGCGCACAGGTCGTTaGGGAAGTGGCCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGTRTGR*GSGPRR
Trigger: ACGCCGTGGGCCACTTCCTCAACGACCTGTGCGCGT...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACATCGTGTGGGGACCGATaGGGTCGGCCGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTSCGDR*GRPSWP
Trigger: TGGCCATGACGGCCGACCTCATCGGTCCCCACACGA...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCGTGTGGGGACCGATaGGGTCGGCCGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGSCGDR*GRPSWP
Trigger: TGGCCATGACGGCCGACCTCATCGGTCCCCACACGA...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CGCCGTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGTCGTGTGGGGACCGATaGGGTCGGCCGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RRAAIPSDSRTFSSPRRQSCGDR*GRPSWP
Trigger: TGGCCATGACGGCCGACCTCATCGGTCCCCACACGA...CTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGCCCCCAGGCTGGAGGTaGGGGGTGAACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGPPGWR*GVNWTE
Trigger: CTCAGTCCAGTTCACCCCTCACCTCCAGCCTGGGGG...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000355415.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCCCCCAGGCTGGAGGTaGGGGGTGAACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGPPGWR*GVNWTE
Trigger: CTCAGTCCAGTTCACCCCTCACCTCCAGCCTGGGGG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355415.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CATGAGGAAGGAGGACAAGAAGCCGCTGAGGTACATCACCAGGGGAATGGTCGCTTCTTGGGACGGGGCTaGCCGCGGTATCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HEEGGQEAAEVHHQGNGRFLGRG*PRYPWL
Trigger: GAGCCAAGGATACCGCGGTCAGCCCCGTCCCAAGAA...GCGACCATTCCCCTGGTGATGTACCTCAGCGGCTTCTTGTCCTCCTTCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCAGCCCACGAGCGGTGTaGACAGCCCGTCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSSPRAV*TARRPP
Trigger: AGGTGGCCGACGGGCTGTGCACACCGCTCGTGGGCT...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTAGCCCACGAGCGGTGTaGACAGCCCGTCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPSPRAV*TARRPP
Trigger: AGGTGGCCGACGGGCTGTGCACACCGCTCGTGGGCT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTACCCGCGACGAGCCCTaGAGGTGCAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPTRDEP*RCSRSQ
Trigger: CTGGCTCCTGCTGCACCTGCAGGGCTCGTCGCGGGT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGACCCGCGACGAGCCCTaGAGGTGCAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRTRDEP*RCSRSQ
Trigger: CTGGCTCCTGCTGCACCTGCAGGGCTCGTCGCGGGT...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGGASPG*PGGIAV
Trigger: CACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCAGCAGCACAGCCGCTaGGTACACGGCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGQQHSR*VHGHTQ
Trigger: CTGGGTGTGGCCGTGTACGCAGCGGCTGTGCTGCTG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GTACAGTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGGGTGGGAGATCTGTGTaGAGGCCCAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: VQYAHLVESRLPEPVLPEGGRSV*RPSQTG
Trigger: TCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC...CTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATACTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACAGCTCCGCTGTTCGTGTaGGGACCGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTAPLFV*GPMRSA
Trigger: GGCCGACCTCATCGGTCCCCACACGAACAGCGGAGC...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGCTCCGCTGTTCGTGTaGGGACCGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGAPLFV*GPMRSA
Trigger: GGCCGACCTCATCGGTCCCCACACGAACAGCGGAGC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTCAAGGGTGCAGGCTCTaGATGGCCATGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPQGCRL*MAMTAS
Trigger: GCTGGCAGTCATGGCCATCCAGAGCCTGCACCCTTG...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGTCCTGAGGGGGCCCTaGCAGTGTCTGGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRVLRGP*QCLETP
Trigger: GGGGGTCTCCAGACACTGCCAGGGCCCCCTCAGGAC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355415.7
CDS-3UTR CCA 90 bp CCAGCCAAACTGGAAGATCACGATGAACGGGCCGTAGTAGAGGAGGGCAGCCCATACACTCCAGCCCAATaGGACCGTTCGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PAKLEDHDERAVVEEGSPYTPAQ*DRSPRP
Trigger: AGGCCTCGGCGAACGGTCCCATTGGGCTGGAGTGTA...TGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGTTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGACGCGCACAGGTCGTTaGGGAAGTGGCCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRTRTGR*GSGPRR
Trigger: ACGCCGTGGGCCACTTCCTCAACGACCTGTGCGCGT...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCACGCGCACAGGTCGTTaGGGAAGTGGCCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSTRTGR*GSGPRR
Trigger: ACGCCGTGGGCCACTTCCTCAACGACCTGTGCGCGT...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGGTGGAGCGAGTAGGTaGGGTACATGGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPGGASR*GTWPCR
Trigger: CCTACATGGCCATGTACCTCACCTACTCGCTCCACC...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCATGGCCAGCGAGGTaGCGAGGATGGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGSWPAR*RGWWHS
Trigger: GCTGTGCCACCATCCTCGTCACCTCGCTGGCCATGA...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGTCATGGCCAGCGAGGTaGCGAGGATGGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGSWPAR*RGWWHS
Trigger: GCTGTGCCACCATCCTCGTCACCTCGCTGGCCATGA...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTTCGTGTGGGGACCGATaGGGTCGGCCGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AAIPSDSRTFSSPRRQPCSCGDR*GRPSWP
Trigger: TGGCCATGACGGCCGACCTCATCGGTCCCCACACGA...ACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGCGCCTCTCCCGGGTaGCCAGGTGGAATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRGASPG*PGGIAV
Trigger: CACTGCTATTCCACCTGGGCACCCGGGAGAGGCGCC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGAACCCAGGGGGTCCTTaGAAGTCCCTGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGNPGGP*KSLAGI
Trigger: GATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTT...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGAACCCAGGGGGTCCTTaGAAGTCCCTGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGNPGGP*KSLAGI
Trigger: GATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTT...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CTGGAAGATCACGATGAACGGGCCGTAGTAGAGGAGGGCAGCCCACTCGGGCGTCCAGGAGTTCGAGGTTaGAGTGAGCTGAGATCCGAT +
Preference number: 4 (lower is better)
Translates to: LEDHDERAVVEEGSPLGRPGVRG*SELRSD
Trigger: ATCGGATCTCAGCTCACTGCAACCTCGAACTCCTGG...ACGCCCGAGTGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR TCA 90 bp GTACAGTATGCCCACCTGGTAGAAAGCCGGCTCCCGGAGCCAGTGCTTCCAGAGACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VQYAHLVESRLPEPVLPETGRSR*TGRSRG
Trigger: TCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGT...CTCTGGAAGCACTGGCTCCGGGAGCCGGCTTTCTACCAGGTGGGCATACTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp CTCCACCTTCTCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHLLMVVGDELRDEAEVGTGRSR*TGRSRG
Trigger: TCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGT...TCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR TCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTGGGACAGGTTCACGATaGGCCTGGTGGTCATGTACA +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPGTGSR*AWWSCT
Trigger: TGTACATGACCACCAGGCTCATCGTGAACCTGTCCC...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp AAGCCGCTGAGGTACATCACCAGGGGAATGGTCGCGATGAACTTCTTGGGCAGGGGGGAATGGTCGCGATaGACTTCTTGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KPLRYITRGMVAMNFLGRGEWSR*TSWAGG
Trigger: TCCACCTGCCCAAGAAGTTCATCGCGACCATTCCCC...CCTGCCCAAGAAGTTCATCGCGACCATTCCCCTGGTGATGTACCTCAGCGGCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp GTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTTCATGGCCAGCGAGGTaGCGAGGATGGTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VQPSHLIPEHSHHPEGSPSWPAR*RGWWHS
Trigger: GCTGTGCCACCATCCTCGTCACCTCGCTGGCCATGA...AGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCCTCCAGGCTGGAGGTaGGGGGTGAACTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRPPGWR*GVNWTE
Trigger: CTCAGTCCAGTTCACCCCTCACCTCCAGCCTGGAGG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389395.7
CDS-3UTR TCA 90 bp ATGAAGGGGAAGGACAGCAGGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGAGGTTGCAGTGAGCTaGGATCCGATGACTACACTC +
Preference number: 4 (lower is better)
Translates to: MKGKDSRTQTVPVVPTAREVAVS*DPMTTL
Trigger: GAGTGTAGTCATCGGATCTCAGCTCACTGCAACCTC...TCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCCTGCTGTCCTTCCCCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR GCA 90 bp CGCCGTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RRAAIPSDSRTFSSPRRQAAVSH*VQVSSW
Trigger: CCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGC...CTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398558.8
CDS-3UTR CCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPSSTFS*SLVTSS
Trigger: GGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCT...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTGTGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SWSLVTSSGMRLRWEICVSSTFS*SLVTSS
Trigger: GGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCT...CACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR CCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACAAGGGTGCAGGCTCTaGATGGCCATGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTQGCRL*MAMTAS
Trigger: GCTGGCAGTCATGGCCATCCAGAGCCTGCACCCTTG...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGAGAGCAGCAGGTAGGTaGACCACATGGACGCGCACA +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGRAAGR*TTWTRT
Trigger: TGTGCGCGTCCATGTGGTTCACCTACCTGCTGCTCT...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGAGAGCAGCAGGTAGGTaGACCACATGGACGCGCACA +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGRAAGR*TTWTRT
Trigger: TGTGCGCGTCCATGTGGTTCACCTACCTGCTGCTCT...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGGGTGGAGCGAGTAGGTaGGGTACATGGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGGGASR*GTWPCR
Trigger: CCTACATGGCCATGTACCTCACCTACTCGCTCCACC...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GTTCACGATGAGCCTGGTGGTCATGTACAGTATGCCCACCTGGTAGAAAGCCGGGGTGGAGCGAGTAGGTaGGGTACATGGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: VHDEPGGHVQYAHLVESRGGASR*GTWPCR
Trigger: CCTACATGGCCATGTACCTCACCTACTCGCTCCACC...CCGGCTTTCTACCAGGTGGGCATACTGTACATGACCACCAGGCTCATCGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp CCAGCCAAACTGGAAGATCACGATGAACGGGCCGTAGTAGAGGAGGGCAGCCCAAGCAGGAGAATCACTTaGGCCCAGGAGTTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: PAKLEDHDERAVVEEGSPSRRIT*AQEFEV
Trigger: AACCTCGAACTCCTGGGCTCAAGTGATTCTCCTGCT...TGGGCTGCCCTCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGTTTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCTACTTCCTGTTCCCTaGCGAGAGGGGCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGLLPVP*REGHPK
Trigger: TTTGGGGTGCCCCTCTCGGCAGGGAACAGGAAGTAG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGGGTGGGAGATCTGTGTaGAGGCCCAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGGGRSV*RPSQTG
Trigger: TCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CAGGTGGAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVERVGEVHGHVGLGQVHSSTFS*SLVTSS
Trigger: GGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCT...GTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR CCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCTGATGCTGATGTCTTaGGTGGGCTCCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRLMLMS*VGSTRD
Trigger: GTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCTGATGCTGATGTCTTaGGTGGGCTCCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSLMLMS*VGSTRD
Trigger: GTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCTGATGCTGATGTCTTaGGTGGGCTCCACCCGCGAC +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPLMLMS*VGSTRD
Trigger: GTCGCGGGTGGAGCCCACCCAAGACATCAGCATCAG...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATGTCACCTGCTCCGCTGTTCGTGTaGGGACCGATGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: IPEHSHHPEGSPVPIMSPAPLFV*GPMRSA
Trigger: GGCCGACCTCATCGGTCCCCACACGAACAGCGGAGC...AGGTGACATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCAAGGGTGCAGGCTCTaGATGGCCATGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSQGCRL*MAMTAS
Trigger: GCTGGCAGTCATGGCCATCCAGAGCCTGCACCCTTG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CACGCCGTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCTCCCCTCACCTTCACTaGGTGTTCGGTGTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: HAVQPSHLIPEHSHHPEGSPHLH*VFGVLR
Trigger: GCGGAGAACACCGAACACCCAGTGAAGGTGAGGGGA...GCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGGACAGGTTCACGATaGGCCTGGTGGTCATGTACA +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGGTGSR*AWWSCT
Trigger: TGTACATGACCACCAGGCTCATCGTGAACCTGTCCC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACGATGAGGGGACAGGTTCACGATaGGCCTGGTGGTCATGTACA +
Preference number: 4 (lower is better)
Translates to: ERVGEVHGHVGLGQVHDEGTGSR*AWWSCT
Trigger: TGTACATGACCACCAGGCTCATCGTGAACCTGTCCC...CTCATCGTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR TCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGGTGGAGCGAGTAGGTaGGGTACATGGCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPGGASR*GTWPCR
Trigger: CCTACATGGCCATGTACCTCACCTACTCGCTCCACC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCGGGGAATGGTCGCGATaGACTTCTTGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSGEWSR*TSWAGG
Trigger: TCCACCTGCCCAAGAAGTTCATCGCGACCATTCCCC...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGGAATGGTCGCGATaGACTTCTTGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRGEWSR*TSWAGG
Trigger: TCCACCTGCCCAAGAAGTTCATCGCGACCATTCCCC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGGGGAATGGTCGCGATaGACTTCTTGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPGEWSR*TSWAGG
Trigger: TCCACCTGCCCAAGAAGTTCATCGCGACCATTCCCC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTTGGTCATGTACAGTATaGCCACCTGGTAGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPWSCTV*PPGRKP
Trigger: CGGCTTTCTACCAGGTGGGCATACTGTACATGACCA...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCTGGATGGCCATGACTaGCAGCCCATTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRLDGHD*QPIGHL
Trigger: AAGGTGGCCAATGGGCTGGCAGTCATGGCCATCCAG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCTGGATGGCCATGACTaGCAGCCCATTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSLDGHD*QPIGHL
Trigger: AAGGTGGCCAATGGGCTGGCAGTCATGGCCATCCAG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTTCCCCACAGTTCCCTTaGACAGGTGCAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPSPQFP*TGAGGC
Trigger: ACAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGA...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCTACTTCCTGTTCCCTaGCGAGAGGGGCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSLLPVP*REGHPK
Trigger: TTTGGGGTGCCCCTCTCGGCAGGGAACAGGAAGTAG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGTGGGAGATCTGTGTaGAGGCCCAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRGGRSV*RPSQTG
Trigger: TCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCGGTGGGAGATCTGTGTaGAGGCCCAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSGGRSV*RPSQTG
Trigger: TCCAGTTTGGCTGGGCCTCCACACAGATCTCCCACC...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGSSTFS*SLVTSS
Trigger: GGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCT...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACG +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSSRVPR*NSSENT
Trigger: CGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTCCCGGGTGCCCAGGTaGAATAGCAGTGAGAACACG +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRSRVPR*NSSENT
Trigger: CGTGTTCTCACTGCTATTCCACCTGGGCACCCGGGA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATGTCACCTGGTGCATCCGCACTGTaGCCTGGGTCAGAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: IPEHSHHPEGSPVPIMSPGASAL*PGSELR
Trigger: GCGAAGCTCTGACCCAGGCCACAGTGCGGATGCACC...AGGTGACATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp AGGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTGGATTGGTCTGTCCTaGACATTTCATAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSPSPVPAPTNPLPDSVDWIGLS*TFHRSG
Trigger: CCCACTTCTATGAAATGTCCAGGACAGACCAATCCA...ATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp AGGTCCCCCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATCCTGATTCTGTGGATTaGTCTGTCCTGGACATTTCA +
Preference number: 4 (lower is better)
Translates to: RSPSPVPAPTNPLPDSVDPDSVD*SVLDIS
Trigger: TGAAATGTCCAGGACAGACCAATCCACAGAATCAGG...ATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGGGGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGTGRSR*TGRSRG
Trigger: TCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGT...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACAACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTTGRSR*TGRSRG
Trigger: TCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGT...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGACAGGTTCACGATaGGCCTGGTGGTCATGTACA +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRGTGSR*AWWSCT
Trigger: TGTACATGACCACCAGGCTCATCGTGAACCTGTCCC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGAGGACAAGAAGCCGCTaGGGTACATCACCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRRTRSR*GTSPGE
Trigger: TTCCCCTGGTGATGTACCTCAGCGGCTTCTTGTCCT...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCAGGACAAGAAGCCGCTaGGGTACATCACCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSRTRSR*GTSPGE
Trigger: TTCCCCTGGTGATGTACCTCAGCGGCTTCTTGTCCT...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGAACGCATACCTGAGTaGCGTGAGCTCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPERIPE*RELHLL
Trigger: GAGAAGGTGGAGCTCACGGCACTCAGGTATGCGTTC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTCGTCATCTCTTTATTTaGTGCCAGCAGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPRHLFI*CQQSPP
Trigger: TGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGTCTGGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: VCPGHFIEVGSQRTLLCLAAVSH*VQVSSA
Trigger: CGCTGATGAGACCTGCACGCAGTGGCTCACAGCAGC...CAGACACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS-3UTR CCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTGAGGCCCAGCCAAACTaGAAGATCACGATGAACGGG +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPEAQPN*KITMNG
Trigger: CCCGTTCATCGTGATCTTCCAGTTTGGCTGGGCCTC...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATGTCACCTGTCTTCCCTGGGCCATaGCTTAGTGCCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: IPEHSHHPEGSPVPIMSPVFPGP*LSASPR
Trigger: TCTGGGGCTGGCACTAAGCCATGGCCCAGGGAAGAC...AGGTGACATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398558.8
CDS-3UTR CCA 90 bp CCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATATCCGCACTGTGGCCTaGGTCAGAGCTTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: PSDSRTFSSPRRQPCPHYIRTVA*VRASHL
Trigger: GAGGTGCGAAGCTCTGACCCAGGCCACAGTGCGGAT...ATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp CGCCGTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGGTACCCTTCTGTGTCTaGTGTCTCTCACTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: RRAAIPSDSRTFSSPRRQVPFCV*CLSLSV
Trigger: CACGCTCAGTGAGAGACACCAGACACAGAAGGGTAC...CTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCACGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTACTGGAAGATCACGATaGACGGGCCGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPTGRSR*TGRSRG
Trigger: TCCTCTACTACGGCCCGTTCATCGTGATCTTCCAGT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCGATCACCAGGAGGCCTaGGAAGTAGGTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSDHQEA*EVGHVP
Trigger: AGGAACATGACCTACTTCTCAGGCCTCCTGGTGATC...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGATCACCAGGAGGCCTaGGAAGTAGGTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRDHQEA*EVGHVP
Trigger: AGGAACATGACCTACTTCTCAGGCCTCCTGGTGATC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR TCA 90 bp GCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTGATCACCAGGAGGCCTaGGAAGTAGGTCATGTTCCT +
Preference number: 4 (lower is better)
Translates to: AAIPSDSRTFSSPRRQPCDHQEA*EVGHVP
Trigger: AGGAACATGACCTACTTCTCAGGCCTCCTGGTGATC...ACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS-3UTR TCA 90 bp GGTGGCGTTCAGTACCTTCACCACGCCGTGCAGCCATCCCATCTGATTCCAGAATGCAGCCATCCCATCTaGTTCCAGAACATTCTCATC +
Preference number: 4 (lower is better)
Translates to: GGVQYLHHAVQPSHLIPECSHPI*FQNILI
Trigger: GATGAGAATGTTCTGGAATCAGATGGGATGGCTGCA...TTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTGAAGGTACTGAACGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR GCA 90 bp GAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACGATGAGTGGTCATGTACAGTATaGCCACCTGGTAGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: ERVGEVHGHVGLGQVHDEWSCTV*PPGRKP
Trigger: CGGCTTTCTACCAGGTGGGCATACTGTACATGACCA...CTCATCGTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS-3UTR GCA 90 bp GGATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGCTGGATGGCCATGACTaGCAGCCCATTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GLVCPGHFIEVGSQRTLLLDGHD*QPIGHL
Trigger: AAGGTGGCCAATGGGCTGGCAGTCATGGCCATCCAG...CAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTATCCAAGAAGCTCATaGAGCCGTACACGAACGCTC +
Preference number: 4 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGYPRSS*SRTRTL
Trigger: GAGCGTTCGTGTACGGCTCCATGAGCTTCTTGGATA...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp ATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGCAAGGGTGCAGGCTCTaGATGGCCATGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGLSWTFHRSGITAYPSVQGCRL*MAMTAS
Trigger: GCTGGCAGTCATGGCCATCCAGAGCCTGCACCCTTG...CACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACATCCAGAGGGCTGGGATaGATTAGAGTTGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTSRGLG*IRVENG
Trigger: CCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGTCCAGAGGGCTGGGATaGATTAGAGTTGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGSRGLG*IRVENG
Trigger: CCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp CCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTATTCCCCTCACCTTCACTaGGTGTTCGGTGTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PSDSRTFSSPRRQPCPHYSPHLH*VFGVLR
Trigger: GCGGAGAACACCGAACACCCAGTGAAGGTGAGGGGA...ATAATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GGCGTTCAGTACCTTCACCACGCCGTGCAGCCATCCCATCTGATTCCAGAACATCTCTCCCTGATTCTGTaGATTGGTCTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: GVQYLHHAVQPSHLIPEHLSLIL*IGLSWT
Trigger: TGTCCAGGACAGACCAATCCACAGAATCAGGGAGAG...ATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTGAAGGTACTGAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp CACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGTCCTGGACATTTCATAGGACAAGAAGCCGCTaGGGTACATCACCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: HPRILSLILWIGLSWTFHRTRSR*GTSPGE
Trigger: TTCCCCTGGTGATGTACCTCAGCGGCTTCTTGTCCT...ATGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTGGTCATGTACAGTATaGCCACCTGGTAGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRWSCTV*PPGRKP
Trigger: CGGCTTTCTACCAGGTGGGCATACTGTACATGACCA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTGGTCATGTACAGTATaGCCACCTGGTAGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSWSCTV*PPGRKP
Trigger: CGGCTTTCTACCAGGTGGGCATACTGTACATGACCA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp ATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGCTGGATGGCCATGACTaGCAGCCCATTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: IGLSWTFHRSGITAYPSVLDGHD*QPIGHL
Trigger: AAGGTGGCCAATGGGCTGGCAGTCATGGCCATCCAG...CACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR GCA 90 bp GGGCACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACATCTCTTTATTTGCTaGCAGCAGAGTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: GHPKSSRGLGWIRVENGTHLFIC*QQSPPS
Trigger: GCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATG...TGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCGTCATCTCTTTATTTaGTGCCAGCAGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGRHLFI*CQQSPP
Trigger: TGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTATCCAAGAAGCTCATaGAGCCGTACACGAACGCTC +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSYPRSS*SRTRTL
Trigger: GAGCGTTCGTGTACGGCTCCATGAGCTTCTTGGATA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTATCCAAGAAGCTCATaGAGCCGTACACGAACGCTC +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRYPRSS*SRTRTL
Trigger: GAGCGTTCGTGTACGGCTCCATGAGCTTCTTGGATA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTTATCCAAGAAGCTCATaGAGCCGTACACGAACGCTC +
Preference number: 4 (lower is better)
Translates to: VQPSHLIPEHSHHPEGSPYPRSS*SRTRTL
Trigger: GAGCGTTCGTGTACGGCTCCATGAGCTTCTTGGATA...AGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTCCAGAGGGCTGGGATaGATTAGAGTTGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSSRGLG*IRVENG
Trigger: CCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp TCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTGTCCCCATTGTACCCTTCTGTGTCTaGTGTCTCTCACTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SHLIPEHSHHPEGSPVPIVPFCV*CLSLSV
Trigger: CACGCTCAGTGAGAGACACCAGACACAGAAGGGTAC...AATGGGGACAGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GTGCAGCCATCCCATCTGATTCCAGAACATTCTCATCACCCAGAAGGCAGCCCTCTCTCCCTGATTCTGTaGATTGGTCTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VQPSHLIPEHSHHPEGSPLSLIL*IGLSWT
Trigger: TGTCCAGGACAGACCAATCCACAGAATCAGGGAGAG...AGGGCTGCCTTCTGGGTGATGAGAATGTTCTGGAATCAGATGGGATGGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCATCTCTTTATTTGCTaGCAGCAGAGTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRHLFIC*QQSPPS
Trigger: GCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCCATCTCTTTATTTGCTaGCAGCAGAGTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSHLFIC*QQSPPS
Trigger: GCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATG...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR GCA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCGTCATCTCTTTATTTaGTGCCAGCAGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRRHLFI*CQQSPP
Trigger: TGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CCA 90 bp GCACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGTCCTGGACATTTCATATCCAAGAAGCTCATaGAGCCGTACACGAACGCTC +
Preference number: 4 (lower is better)
Translates to: APTNPLPDSVDWSVLDISYPRSS*SRTRTL
Trigger: GAGCGTTCGTGTACGGCTCCATGAGCTTCTTGGATA...TGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR TCA 90 bp GCACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGTCCTGGACATTTCATGCAGCCATCCCATCTaGTTCCAGAACATTCTCATC +
Preference number: 4 (lower is better)
Translates to: APTNPLPDSVDWSVLDISCSHPI*FQNILI
Trigger: GATGAGAATGTTCTGGAATCAGATGGGATGGCTGCA...TGAAATGTCCAGGACAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGTCTGTGGATTGGTCTGTCCTaGACATTTCATAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VCPGHFIEVGSQRTLLCLWIGLS*TFHRSG
Trigger: CCCACTTCTATGAAATGTCCAGGACAGACCAATCCA...CAGACACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CCA 90 bp GTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGTCTGCCTGATTCTGTGGATTaGTCTGTCCTGGACATTTCA +
Preference number: 4 (lower is better)
Translates to: VCPGHFIEVGSQRTLLCLPDSVD*SVLDIS
Trigger: TGAAATGTCCAGGACAGACCAATCCACAGAATCAGG...CAGACACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS TCA 90 bp GGCCGGCGGGCGGCAAGGCTCCGGGCCAGCATGGGGGCTTCGTGGTaGCTGTCAAGCAAGAGCGCGGCGAGGGTCCACGCGCGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: GRRAARLRASMGASW*LSSKSAARVHARAR
Trigger: TCTCGCCCGCGCGTGGACCCTCGCCGCGCTCTTGCTTGACAGTCACCACGAAGCCCCCATGCTGGCCCGGAGCCTTGCCGCCCGCCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585814.1
ENST00000591878.1
CDS CCA 90 bp TATCCTTGGCTCCAGGCCGGCGGGCGGCAAGGCTCCGGGCCAGCATaGGGGCTTCGTGGTGACTGTCAAGCAAGAGCGCGGCGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: YPWLQAGGRQGSGPA*GLRGDCQARARRGS
Trigger: GGACCCTCGCCGCGCTCTTGCTTGACAGTCACCACGAAGCCCCCATGCTGGCCCGGAGCCTTGCCGCCCGCCGGCCTGGAGCCAAGGATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585814.1
ENST00000591878.1
CDS CCA 90 bp CTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTaGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LEGSRWPPAIRQATR*KYTPMGRDAAGQLW
Trigger: CCACAGCTGGCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTGGCCAGCGGGAACCCTCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 90 bp GAACGACTCTCCAGCCCTTCCCTCGAGGCCACCTCACCCCGCAGCTaGGAGGAGGGAGTGGTCAGCGTGGTTGCCGAGACACTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ERLSSPSLEATSPRS*EEGVVSVVAETLGG
Trigger: GCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGGTGGCCTCGAGGGAAGGGCTGGAGAGTCGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 90 bp GCCTCAGAGGCCTTCTGGCAGGAGCCCGGGGGATCCAGGCAGACATaGAAACCCTCAGGCAAGAGGCTGCACGGCCCTGTATCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: ASEAFWQEPGGSRQT*KPSGKRLHGPVSPR
Trigger: CCGAGGGGATACAGGGCCGTGCAGCCTCTTGCCTGAGGGTTTGCATGTCTGCCTGGATCCCCCGGGCTCCTGCCAGAAGGCCTCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp CGCTGGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTaGTACACAGGCCTGACCAACTCGGACGCCTGGGAAGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RWKYTPMGRDAAGQL*YTGLTNSDAWEAWY
Trigger: GTACCAGGCTTCCCAGGCGTCCGAGTTGGTCAGGCCTGTGTACCACAGCTGGCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 90 bp CTGCCCACCCTCAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCTaGCCACCAGCCATCAGGCAGGCCACACGCTGGAAGTACACGCCC +
Preference number: 5 (lower is better)
Translates to: LPTLSDDYLSLEGSR*PPAIRQATRWKYTP
Trigger: GGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTGGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGAGGGTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 90 bp TCAGTCTCTGCCCCCTGCCCACCCTCAGCGATGACTACCTGTCCCTaGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCT +
Preference number: 5 (lower is better)
Translates to: SVSAPCPPSAMTTCP*RVPAGHQPSGRPHA
Trigger: AGCGTGTGGCCTGCCTGATGGCTGGTGGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGAGGGTGGGCAGGGGGCAGAGACTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS-3UTR CAA 90 bp AGGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGAGAGGCTGAAGCAGGAGAAGCGGGCTGCGGGCGGTaGGTTGGAGCGTCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: RTQTVPVVPTAREAEAGEAGCGR*VGASRS
Trigger: ACTGCGCGACGCTCCAACCAACCGCCCGCAGCCCGC...TTCTCCTGCTTCAGCCTCTCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS GCA 90 bp GGCCACCTCACCCCGCAGCTGGGAGGAGGGAGTGGTCAGCGTGGTTaGCGAGACACTGGGTGGCCTTTATGCTGTCAACGGTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GHLTPQLGGGSGQRG*RDTGWPLCCQRWPQ
Trigger: CTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp ACCTCTTGCAGCCCGTGGTGGCTCTGGGCAACCCCAGGCACTCCTTaGCCCCCGGTCTCTGCTTCTGTCTTCACCCGGCCTTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: TSCSPWWLWATPGTP*PPVSASVFTRPSCL
Trigger: CAGACAGGAAGGCCGGGTGAAGACAGAAGCAGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCACGGGCTGCAAGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp TCGAGGCCACCTCACCCCGCAGCTGGGAGGAGGGAGTGGTCAGCGTaGTTGCCGAGACACTGGGTGGCCTTTATGCTGTCAACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SRPPHPAAGRREWSA*LPRHWVAFMLSTVA
Trigger: GGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGGTGGCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp GCCCTTCCCTCGAGGCCACCTCACCCCGCAGCTGGGAGGAGGGAGTaGTCAGCGTGGTTGCCGAGACACTGGGTGGCCTTTATGCTGTCA +
Preference number: 5 (lower is better)
Translates to: ALPSRPPHPAAGRRE*SAWLPRHWVAFMLS
Trigger: TGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGGTGGCCTCGAGGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp ATGGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTGTGGAGCTGCGGGCGGTTGGTaGGAGCGTCGCGCAGTCGGG +
Preference number: 5 (lower is better)
Translates to: MVVGDELRDEAEVGDLCGAAGGW*ERRAVG
Trigger: CCCGACTGCGCGACGCTCCAACCAACCGCCCGCAGC...TCCACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS TCA 90 bp TGGAGCGTCGCGCAGTCGGGAGGTCCGGGAAAGTTTCTTTGGAGGTaGAAACAGCCGCGGAACTCCGGGCCCCCATCAGACCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: WSVAQSGGPGKFLWR*KQPRNSGPPSDPAS
Trigger: GGAGGCAGGGTCTGATGGGGGCCCGGAGTTCCGCGGCTGTTTTCACCTCCAAAGAAACTTTCCCGGACCTCCCGACTGCGCGACGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586402.1
ENST00000588626.1
CDS TCA 90 bp GTGTTCGGTGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTaGGCCACTGCGTGCAGGTCTCATCAGCGTCGCAGGCGGGTCGGC +
Preference number: 5 (lower is better)
Translates to: VFGVLRLGLSQIVLL*ATACRSHQRRRRVG
Trigger: GCCGACCCGCCTGCGACGCTGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACACCGAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS GCA 90 bp GTGGTGGCTCTGGGCAACCCCAGGCACTCCTTGGCCCCCGGTCTCTaGTTCTGTCTTCACCCGGCCTTCCTGTCTGCGTCCAAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: VVALGNPRHSLAPGL*FCLHPAFLSASKFP
Trigger: GGGAAACTTGGACGCAGACAGGAAGGCCGGGTGAAGACAGAAGCAGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 90 bp TGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCAGCGTCGCAGGCGGGTCGGCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: CSPPRAVTNRAAVSH*VQVSSASQAGRPQQ
Trigger: CTGCTGTGGCCGACCCGCCTGCGACGCTGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS CCA 90 bp GTTCGCCCTCTGAAATCCAGGCCTGTGCGGGGCTGGGCCCTTCTGTaGCTGAGAGAGTCTGTCCCACACCTCTTGCAGCCCGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VRPLKSRPVRGWALL*LRESVPHLLQPVVA
Trigger: AGCCACCACGGGCTGCAAGAGGTGTGGGACAGACTCTCTCAGCCACAGAAGGGCCCAGCCCCGCACAGGCCTGGATTTCAGAGGGCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp CAGCGTGGTTGCCGAGACACTGGGTGGCCTTTATGCTGTCAACGGTaGCCTCAGAGGCCTTCTGGCAGGAGCCCGGGGGATCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: QRGCRDTGWPLCCQR*PQRPSGRSPGDPGR
Trigger: TCTGCCTGGATCCCCCGGGCTCCTGCCAGAAGGCCTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp CCCGCAGCTGGGAGGAGGGAGTGGTCAGCGTGGTTGCCGAGACACTaGGTGGCCTTTATGCTGTCAACGGTGGCCTCAGAGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PAAGRREWSAWLPRH*VAFMLSTVASEAFW
Trigger: CCAGAAGGCCTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp CAGGTGGAGCGAGTAGGTGAGGTACATGGCCATGTAGGTCTGGGACAGGTTCACCTGACCGCGGTATCCTaGGCTCCAGGCCGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QVERVGEVHGHVGLGQVHLTAVS*APGRRA
Trigger: CGCCCGCCGGCCTGGAGCCAAGGATACCGCGGTCAG...GTGAACCTGTCCCAGACCTACATGGCCATGTACCTCACCTACTCGCTCCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585814.1
CDS GCA 90 bp GGGGTCAAAGCACTCGCTGTAGACATGGGCTCAGTCTCTGCCCCCTaGCCACCCTCAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: GVKALAVDMGSVSAP*PPSAMTTCPWRVPA
Trigger: AGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGAGGGTGGGCAGGGGGCAGAGACTGAGCCCATGTCTACAGCGAGTGCTTTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 90 bp CACTGGGTGGCCTTTATGCTGTCAACGGTGGCCTCAGAGGCCTTCTaGCAGGAGCCCGGGGGATCCAGGCAGACATGCAAACCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HWVAFMLSTVASEAF*QEPGGSRQTCKPSG
Trigger: GCCTGAGGGTTTGCATGTCTGCCTGGATCCCCCGGGCTCCTGCCAGAAGGCCTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp CTGAAGGACAGACTCCAAGTGGCGAGGGAGGGAGACCCCACGCCGTaGGCCAGGCCTCTACATCATCCACCCTGGCAGACATCGCAAAGG +
Preference number: 5 (lower is better)
Translates to: LKDRLQVAREGDPTP*ARPLHHPPWQTSQR
Trigger: CCTTTGCGATGTCTGCCAGGGTGGATGATGTAGAGGCCTGGCCCACGGCGTGGGGTCTCCCTCCCTCGCCACTTGGAGTCTGTCCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS GCA 90 bp TGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGGCCTAGTGGGTCCCCCAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: CSPPRAVTNRAAVSH*VQVSSWPSGSPSLP
Trigger: GGGAAGACTGGGGGACCCACTAGGCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000589157.1
CDS GCA 90 bp GGTGCAGGAGGCTGTCAGGAGTCAGGGCCGGGCATCACGGTCCCCTaGAAGGGAGGGGTGGAAATGGCATTAGAGAGTGTGGGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: GAGGCQESGPGITVP*KGGVEMALESVGQC
Trigger: ACACTGACCCACACTCTCTAATGCCATTTCCACCCCTCCCTTGCAGGGGACCGTGATGCCCGGCCCTGACTCCTGACAGCCTCCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589063.5
CDS CCA 90 bp TGTTCCCCTCCGGCCAGTGGCCGCTCACTGTGGGGGCTACAGACCTaGAGACAGGCCAAGAACAAATGTGTCTGCGGCCGTCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: CSPPASGRSLWGLQT*RQAKNKCVCGRLQG
Trigger: TCCTTGGAGACGGCCGCAGACACATTTGTTCTTGGCCTGTCTCCAGGTCTGTAGCCCCCACAGTGAGCGGCCACTGGCCGGAGGGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp GAGGGAGACCCCACGCCGTGGGCCAGGCCTCTACATCATCCACCCTaGCAGACATCGCAAAGGGGTCAAAGCACTCGCTGTAGACATGGG +
Preference number: 5 (lower is better)
Translates to: EGDPTPWARPLHHPP*QTSQRGQSTRCRHG
Trigger: CCCATGTCTACAGCGAGTGCTTTGACCCCTTTGCGATGTCTGCCAGGGTGGATGATGTAGAGGCCTGGCCCACGGCGTGGGGTCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCCTGGCCAGGCCTTCTaGGGTGCCGTGGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRPGQAF*GAVGAG
Trigger: GCCTGCCCCCACGGCACCCAAGAAGGCCTGGCCAGG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCCTGGCCAGGCCTTCTaGGGTGCCGTGGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPPGQAF*GAVGAG
Trigger: GCCTGCCCCCACGGCACCCAAGAAGGCCTGGCCAGG...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS CCA 90 bp CACCAGCAGGGACAGGTTCTGAGTGCCGTGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATC +
Preference number: 5 (lower is better)
Translates to: HQQGQVLSAVSSTFS*SLVTSSGMRLRWEI
Trigger: GATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGAACCTGTCCCTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591878.1
CDS CCA 90 bp GGCCACAGAAATGTTCGCCCTCTGAAATCCAGGCCTGTGCGGGGCTaGGCCCTTCTGTGGCTGAGAGAGTCTGTCCCACACCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GHRNVRPLKSRPVRG*ALLWLRESVPHLLQ
Trigger: CTGCAAGAGGTGTGGGACAGACTCTCTCAGCCACAGAAGGGCCCAGCCCCGCACAGGCCTGGATTTCAGAGGGCGAACATTTCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGACGCGCACAGGTCGTaGAGGAAGTGGCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGDAHRS*RKWPTA
Trigger: CGCCGTGGGCCACTTCCTCAACGACCTGTGCGCGTC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp CGTCATCTCTTTATTTGCTGCCAGCAGAGTCCACCAAGCCTGCCGGGCAGCCCTAAACCCAGGGGGTCCTaGCAAGTCCCTGGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: RHLFICCQQSPPSLPGSPKPRGS*QVPGGH
Trigger: ATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTTT...AGGGCTGCCCGGCAGGCTTGGTGGACTCTGCTGGCAGCAAATAAAGAGATGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS GCA 90 bp CTGTGGGGGCTACAGACCTGGAGACAGGCCAAGAACAAATGTGTCTaGGGCCGTCTCCAAGGACTGCAAACGCACTGGGAGCTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: LWGLQTWRQAKNKCV*GRLQGLQTHWELRP
Trigger: TGGCCGAAGCTCCCAGTGCGTTTGCAGTCCTTGGAGACGGCCGCAGACACATTTGTTCTTGGCCTGTCTCCAGGTCTGTAGCCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp ACCACGGTGAACGCATACCTGAGTGCCGTGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATC +
Preference number: 5 (lower is better)
Translates to: TTVNAYLSAVSSTFS*SLVTSSGMRLRWEI
Trigger: GATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGGTATGCGTTCACCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000585814.1
ENST00000588918.5
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGACGCGCACAGGTCGTaGAGGAAGTGGCCCACGGCG +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRDAHRS*RKWPTA
Trigger: CGCCGTGGGCCACTTCCTCAACGACCTGTGCGCGTC...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGTCCCCACAGTTCCCTaGCACAGGTGCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGVPTVP*HRCRRL
Trigger: CAGCCTCCTGCACCTGTGCAAGGGAACTGTGGGGAC...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS GCA 90 bp GGAGACAGGCCAAGAACAAATGTGTCTGCGGCCGTCTCCAAGGACTaGAAACGCACTGGGAGCTTCGGCCACAGAAATGTTCGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GDRPRTNVSAAVSKD*KRTGSFGHRNVRPL
Trigger: CAGAGGGCGAACATTTCTGTGGCCGAAGCTCCCAGTGCGTTTGCAGTCCTTGGAGACGGCCGCAGACACATTTGTTCTTGGCCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTAAACCCAGGGGGTCCTaGCAAGTCCCTGGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPKPRGS*QVPGGH
Trigger: ATGCCCGCCAGGGACTTGCAAGGACCCCCTGGGTTT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp ATGAAGGGGAAGGACAGCAGGACGCAGACGGTGCCTGTGGTCCCAACTGCTCGATCCGGGAAAGTTTCTTaGGAGGTGAAAACAGCCGCG +
Preference number: 5 (lower is better)
Translates to: MKGKDSRTQTVPVVPTARSGKVS*EVKTAA
Trigger: CGCGGCTGTTTTCACCTCCAAAGAAACTTTCCCGGA...TCGAGCAGTTGGGACCACAGGCACCGTCTGCGTCCTGCTGTCCTTCCCCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS-3UTR CAA 90 bp CCTCCCCAGTCCCGGCACCCACGAATCCTCTCCCTGATTCTGTGGATTGGTCTGTTCCTCCCAATGCACTaGTTGATGGGCTTCATGAGG +
Preference number: 5 (lower is better)
Translates to: PPQSRHPRILSLILWIGLFLPMH*LMGFMR
Trigger: CCTCATGAAGCCCATCAACAAGTGCATTGGGAGGAA...CAGACCAATCCACAGAATCAGGGAGAGGATTCGTGGGTGCCGGGACTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS TCA 90 bp GTGTTCGGTGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTaGGCCACTGCGTGCAGGTCTCATCCTGGGTGTATTTTACAAACG +
Preference number: 5 (lower is better)
Translates to: VFGVLRLGLSQIVLL*ATACRSHPGCILQT
Trigger: CGTTTGTAAAATACACCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACACCGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 90 bp AAGAACAAATGTGTCTGCGGCCGTCTCCAAGGACTGCAAACGCACTaGGAGCTTCGGCCACAGAAATGTTCGCCCTCTGAAATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: KNKCVCGRLQGLQTH*ELRPQKCSPSEIQA
Trigger: GGCCTGGATTTCAGAGGGCGAACATTTCTGTGGCCGAAGCTCCCAGTGCGTTTGCAGTCCTTGGAGACGGCCGCAGACACATTTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGACCTTCTCATGGTCGTaGGTGACGAGCTCCGGGATG +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRTFSWS*VTSSGM
Trigger: CATCCCGGAGCTCGTCACCAACGACCATGAGAAGGT...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS GCA 90 bp TGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGGGTGTATTTTACAAACGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: CSPPRAVTNRAAVSH*VQVSSWVYFTNGLD
Trigger: ATCCAGTCCGTTTGTAAAATACACCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS-3UTR CAA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGMTASP*ATLSKK
Trigger: CTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCAT...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp CCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGCCGTCATCTCTTTATTaGCTGCCAGCAGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: PEGWDGLELRMGHPQNPGPSSLY*LPAEST
Trigger: GGTGGACTCTGCTGGCAGCAAATAAAGAGATGACGG...CCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp AGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGCTCCCAATGCACTTGTaGATGGGCTTCATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RGLGWIRVENGTPSKPRGLPMHL*MGFMRK
Trigger: CTTCCTCATGAAGCCCATCAACAAGTGCATTGGGAG...CCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp GGCGTTCAGTACCTTCACCACGCCGTGCAGCCATCCCATCTGATTCCAGAACATCTCCCAATGCACTTGTaGATGGGCTTCATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GVQYLHHAVQPSHLIPEHLPMHL*MGFMRK
Trigger: CTTCCTCATGAAGCCCATCAACAAGTGCATTGGGAG...ATGTTCTGGAATCAGATGGGATGGCTGCACGGCGTGGTGAAGGTACTGAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS-3UTR CAA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSMTASP*ATLSKK
Trigger: CTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCAT...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPMTASP*ATLSKK
Trigger: CTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCAT...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp ACCCCAAATCCTCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCCGTCATCTCTTTATTaGCTGCCAGCAGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: TPNPPEGWDGLELRMGHPPSSLY*LPAEST
Trigger: GGTGGACTCTGCTGGCAGCAAATAAAGAGATGACGG...AGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGAGGATTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGCTCCCAATGCACTTGTaGATGGGCTTCATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRLPMHL*MGFMRK
Trigger: CTTCCTCATGAAGCCCATCAACAAGTGCATTGGGAG...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTTCCTCCCAATGCACTaGTTGATGGGCTTCATGAGG +
Preference number: 5 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSFLPMH*LMGFMR
Trigger: CCTCATGAAGCCCATCAACAAGTGCATTGGGAGGAA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTTCCTCCCAATGCACTaGTTGATGGGCTTCATGAGG +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRFLPMH*LMGFMR
Trigger: CCTCATGAAGCCCATCAACAAGTGCATTGGGAGGAA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp TCCAGAGGGCTGGGATGGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGTGGGATGGATTAGAGTaGAGAATGGGACACCCTCAA +
Preference number: 5 (lower is better)
Translates to: SRGLGWIRVENGTPSKPRWDGLE*RMGHPQ
Trigger: TTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCA...CCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCAGCCCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS-3UTR CAA 90 bp GGATTAGAGTTGAGAATGGGACACCCTCAAAACCCAGGGGGTCCTTGCAAGTCCTGGGATGGATTAGAGTaGAGAATGGGACACCCTCAA +
Preference number: 5 (lower is better)
Translates to: GLELRMGHPQNPGGPCKSWDGLE*RMGHPQ
Trigger: TTGAGGGTGTCCCATTCTCAACTCTAATCCATCCCA...GGACTTGCAAGGACCCCCTGGGTTTTGAGGGTGTCCCATTCTCAACTCTAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
CDS GCA 90 bp TTATTTAACCCTTTGAGGAAATGCCAGTCTGTTTTCCAAAGCAGCTaGATCTGCCTCCTAGACATCCAATGGGACCGTTCGCCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LFNPLRKCQSVFQSS*ICLLDIQWDRSPRP
Trigger: AGGCCTCGGCGAACGGTCCCATTGGATGTCTAGGAGGCAGATGCAGCTGCTTTGGAAAACAGACTGGCATTTCCTCAAAGGGTTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586402.1
CDS-3UTR CAA 90 bp ATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTCTGTGATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: IGLSWTFHRSGITAYPSVMTASP*ATLSKK
Trigger: CTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCAT...CACAGAAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS-3UTR CAA 90 bp TGTGGATTGGTCTGTCCTGGACATTTCATAGAAGTGGGATCACAGCGTACCCTTATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: CGLVCPGHFIEVGSQRTLMTASP*ATLSKK
Trigger: CTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCAT...AAGGGTACGCTGTGATCCCACTTCTATGAAATGTCCAGGACAGACCAATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000615073.4
CDS CCA 72 bp GCCAGGCCTTGCGCGGGCCGTAGCGGGCGCAGCAGCTaGCGGCGCGGTCGGCCTCGTAGCCCACGAGCGGTG +
Preference number: 6 (lower is better)
Translates to: ARPCAGRSGRSS*RRGRPRSPRAV
Trigger: CACCGCTCGTGGGCTACGAGGCCGACCGCGCCGCCAGCTGCTGCGCCCGCTACGGCCCGCGCAAGGCCTGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355415.7
CDS CCA 72 bp GGGCGGGGCGGCCGACGGGGGCGGGCTGCGGGCGGTTaGTTGGAGCGTCGCGCAGTCGGGAGGTCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: GRGGRRGRAAGG*LERRAVGRSGK
Trigger: TTTCCCGGACCTCCCGACTGCGCGACGCTCCAACCAACCGCCCGCAGCCCGCCCCCGTCGGCCGCCCCGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586402.1
ENST00000588626.1
CDS CCA 72 bp GCAGGACGCAGACGGTGCCGTAGCGGGCGCAGCAGCTaGCGGCGCGGTCGGCCTCGTAGCCCACGAGCGGTG +
Preference number: 6 (lower is better)
Translates to: AGRRRCRSGRSS*RRGRPRSPRAV
Trigger: CACCGCTCGTGGGCTACGAGGCCGACCGCGCCGCCAGCTGCTGCGCCCGCTACGGCACCGTCTGCGTCCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389395.7
ENST00000588918.5
CDS TCA 72 bp GCGGCAAGGCTCCGGGCCAGCATGGGGGCTTCGTGGTaGCTGTCAAGCAAGAGCGCGGCGAGGGTCCACGCG +
Preference number: 6 (lower is better)
Translates to: AARLRASMGASW*LSSKSAARVHA
Trigger: CGCGTGGACCCTCGCCGCGCTCTTGCTTGACAGTCACCACGAAGCCCCCATGCTGGCCCGGAGCCTTGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585814.1
ENST00000591878.1
CDS GCA 72 bp GATGGTGGCACAGCCAGCACCCAGCAGCACAGCCGCTaGGTACACGGCCACACCCAGTCCCTCCGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: DGGTASTQQHSR*VHGHTQSLRQR
Trigger: GCGCTGGCGGAGGGACTGGGTGTGGCCGTGTACGCAGCGGCTGTGCTGCTGGGTGCTGGCTGTGCCACCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000588918.5
ENST00000589063.5
ENST00000615073.4
CDS CCA 72 bp TCCCGCTGGCCACCAGCCATCAGGCAGGCCACACGCTaGAAGTACACGCCCATGGGACGGGACGCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: SRWPPAIRQATR*KYTPMGRDAAG
Trigger: GCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGGCTGGTGGCCAGCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 72 bp GCCCCCTGCCCACCCTCAGCGATGACTACCTGTCCCTaGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: APCPPSAMTTCP*RVPAGHQPSGR
Trigger: CCTGCCTGATGGCTGGTGGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGAGGGTGGGCAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CAA 72 bp CAGCCCGTGGTGGCTCTGGGCAACCCCAGGCACTCCTaGGCCCCCGGTCTCTGCTTCTGTCTTCACCCGGCC +
Preference number: 6 (lower is better)
Translates to: QPVVALGNPRHS*APGLCFCLHPA
Trigger: GGCCGGGTGAAGACAGAAGCAGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCACGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp AGCCCGTGGTGGCTCTGGGCAACCCCAGGCACTCCTTaGCCCCCGGTCTCTGCTTCTGTCTTCACCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SPWWLWATPGTP*PPVSASVFTRP
Trigger: AGGCCGGGTGAAGACAGAAGCAGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCACGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp AGTCTGTCCCACACCTCTTGCAGCCCGTGGTGGCTCTaGGCAACCCCAGGCACTCCTTGGCCCCCGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SLSHTSCSPWWL*ATPGTPWPPVS
Trigger: AGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCACGGGCTGCAAGAGGTGTGGGACAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp TACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTaGTACACAGGCCTGACCAACTCGGACGCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: YTPMGRDAAGQL*YTGLTNSDAWE
Trigger: TTCCCAGGCGTCCGAGTTGGTCAGGCCTGTGTACCACAGCTGGCCGGCTGCGTCCCGTCCCATGGGCGTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 72 bp CCATCAGGCAGGCCACACGCTGGAAGTACACGCCCATaGGACGGGACGCAGCCGGCCAGCTGTGGTACACAG +
Preference number: 6 (lower is better)
Translates to: PSGRPHAGSTRP*DGTQPASCGTQ
Trigger: CTGTGTACCACAGCTGGCCGGCTGCGTCCCGTCCCATGGGCGTGTACTTCCAGCGTGTGGCCTGCCTGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CAA 90 bp CACCTCTTGCAGCCCGTGGTGGCTCTGGGCAACCCCAGGCACTCCTaGGCCCCCGGTCTCTGCTTCTGTCTTCACCCGGCCTTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: HLLQPVVALGNPRHS*APGLCFCLHPAFLS
Trigger: AGACAGGAAGGCCGGGTGAAGACAGAAGCAGAGACCGGGGGCCAAGGAGTGCCTGGGGTTGCCCAGAGCCACCACGGGCTGCAAGAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS TCA 72 bp AATCCAGGCCTGTGCGGGGCTGGGCCCTTCTGTGGCTaGGAGAGTCTGTCCCACACCTCTTGCAGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: NPGLCGAGPFCG*ESLSHTSCSPW
Trigger: CCACGGGCTGCAAGAGGTGTGGGACAGACTCTCTCAGCCACAGAAGGGCCCAGCCCCGCACAGGCCTGGATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp GATCCAGGCAGACATGCAAACCCTCAGGCAAGAGGCTaGACGGCCCTGTATCCCCTCGGGGACCCTCGAGGC +
Preference number: 6 (lower is better)
Translates to: DPGRHANPQARG*TALYPLGDPRG
Trigger: GCCTCGAGGGTCCCCGAGGGGATACAGGGCCGTGCAGCCTCTTGCCTGAGGGTTTGCATGTCTGCCTGGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp CCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCAGCGTCGCAGGCGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PRAVTNRAAVSH*VQVSSASQAGR
Trigger: CCGACCCGCCTGCGACGCTGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615073.4
CDS CCA 72 bp CTCAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCTaGCCACCAGCCATCAGGCAGGCCACACGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: LSDDYLSLEGSR*PPAIRQATRWK
Trigger: CTTCCAGCGTGTGGCCTGCCTGATGGCTGGTGGCCAGCGGGAACCCTCCAGGGACAGGTAGTCATCGCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 72 bp AGACTCCAAGTGGCGAGGGAGGGAGACCCCACGCCGTaGGCCAGGCCTCTACATCATCCACCCTGGCAGACA +
Preference number: 6 (lower is better)
Translates to: RLQVAREGDPTP*ARPLHHPPWQT
Trigger: TGTCTGCCAGGGTGGATGATGTAGAGGCCTGGCCCACGGCGTGGGGTCTCCCTCCCTCGCCACTTGGAGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CAA 72 bp GAGCGTCGCGCAGTCGGGAGGTCCGGGAAAGTTTCTTaGGAGGTGAAAACAGCCGCGGAACTCCGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: ERRAVGRSGKVS*EVKTAAELRAP
Trigger: GGGGGCCCGGAGTTCCGCGGCTGTTTTCACCTCCAAAGAAACTTTCCCGGACCTCCCGACTGCGCGACGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586402.1
ENST00000588626.1
CDS CAA 90 bp AGGCCACCTCACCCCGCAGCTGGGAGGAGGGAGTGGTCAGCGTGGTaGCCGAGACACTGGGTGGCCTTTATGCTGTCAACGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: RPPHPAAGRREWSAW*PRHWVAFMLSTVAS
Trigger: TGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp CCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGGCCTAGTGGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: PRAVTNRAAVSH*VQVSSWPSGSP
Trigger: GGGGGACCCACTAGGCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000589157.1
CDS GCA 72 bp GCACTCGCTGTAGACATGGGCTCAGTCTCTGCCCCCTaGCCACCCTCAGCGATGACTACCTGTCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ALAVDMGSVSAP*PPSAMTTCPWR
Trigger: CCTCCAGGGACAGGTAGTCATCGCTGAGGGTGGGCAGGGGGCAGAGACTGAGCCCATGTCTACAGCGAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS CCA 72 bp CTGAAATCCAGGCCTGTGCGGGGCTGGGCCCTTCTGTaGCTGAGAGAGTCTGTCCCACACCTCTTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: LKSRPVRGWALL*LRESVPHLLQP
Trigger: GGGCTGCAAGAGGTGTGGGACAGACTCTCTCAGCCACAGAAGGGCCCAGCCCCGCACAGGCCTGGATTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp TGCCGAGACACTGGGTGGCCTTTATGCTGTCAACGGTaGCCTCAGAGGCCTTCTGGCAGGAGCCCGGGGGAT +
Preference number: 6 (lower is better)
Translates to: CRDTGWPLCCQR*PQRPSGRSPGD
Trigger: ATCCCCCGGGCTCCTGCCAGAAGGCCTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp CCTCACCCCGCAGCTGGGAGGAGGGAGTGGTCAGCGTaGTTGCCGAGACACTGGGTGGCCTTTATGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PHPAAGRREWSA*LPRHWVAFMLS
Trigger: TGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCCAGCTGCGGGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 90 bp GGTTGGTTGGAGCGTCGCGCAGTCGGGAGGTCCGGGAAAGTTTCTTaGGAGGTGAAAACAGCCGCGGAACTCCGGGCCCCCATCAGACCC +
Preference number: 6 (lower is better)
Translates to: GWLERRAVGRSGKVS*EVKTAAELRAPIRP
Trigger: GGGTCTGATGGGGGCCCGGAGTTCCGCGGCTGTTTTCACCTCCAAAGAAACTTTCCCGGACCTCCCGACTGCGCGACGCTCCAACCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586402.1
ENST00000588626.1
CDS TCA 72 bp GCGCAGTCGGGAGGTCCGGGAAAGTTTCTTTGGAGGTaGAAACAGCCGCGGAACTCCGGGCCCCCATCAGAC +
Preference number: 6 (lower is better)
Translates to: AQSGGPGKFLWR*KQPRNSGPPSD
Trigger: GTCTGATGGGGGCCCGGAGTTCCGCGGCTGTTTTCACCTCCAAAGAAACTTTCCCGGACCTCCCGACTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586402.1
ENST00000588626.1
CDS GCA 72 bp TCGGTGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTaGTGTGAGCCACTGCGTGCAGGTCTCATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SVFSASGCHKSC*CEPLRAGLILA
Trigger: GGCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398558.8
ENST00000589157.1
CDS GCA 72 bp GGCTGTCAGGAGTCAGGGCCGGGCATCACGGTCCCCTaGAAGGGAGGGGTGGAAATGGCATTAGAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: GCQESGPGITVP*KGGVEMALESV
Trigger: CACACTCTCTAATGCCATTTCCACCCCTCCCTTGCAGGGGACCGTGATGCCCGGCCCTGACTCCTGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589063.5
CDS CCA 72 bp GGAGGGAGTGGTCAGCGTGGTTGCCGAGACACTGGGTaGCCTTTATGCTGTCAACGGTGGCCTCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GGSGQRGCRDTG*PLCCQRWPQRP
Trigger: AGGCCTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp GGGAGGAGGGAGTGGTCAGCGTGGTTGCCGAGACACTaGGTGGCCTTTATGCTGTCAACGGTGGCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: GRREWSAWLPRH*VAFMLSTVASE
Trigger: CTCTGAGGCCACCGTTGACAGCATAAAGGCCACCCAGTGTCTCGGCAACCACGCTGACCACTCCCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp CCCACGCCGTGGGCCAGGCCTCTACATCATCCACCCTaGCAGACATCGCAAAGGGGTCAAAGCACTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PTPWARPLHHPP*QTSQRGQSTRC
Trigger: ACAGCGAGTGCTTTGACCCCTTTGCGATGTCTGCCAGGGTGGATGATGTAGAGGCCTGGCCCACGGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589157.1
CDS GCA 72 bp TCGGTGTTCTCCGCCTCGGGCTGTCACAAATCGTGCTaGTGTGAGCCACTGCGTGCAGGTCTCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: SVFSASGCHKSC*CEPLRAGLILG
Trigger: ACCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGGCGGAGAACACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp GGACAGGTTCTGAGTGCCGTGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: GQVLSAVSSTFS*SLVTSSGMRLR
Trigger: CCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGAACCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591878.1
CDS CCA 72 bp AATGTTCGCCCTCTGAAATCCAGGCCTGTGCGGGGCTaGGCCCTTCTGTGGCTGAGAGAGTCTGTCCCACAC +
Preference number: 6 (lower is better)
Translates to: NVRPLKSRPVRG*ALLWLRESVPH
Trigger: GTGTGGGACAGACTCTCTCAGCCACAGAAGGGCCCAGCCCCGCACAGGCCTGGATTTCAGAGGGCGAACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 72 bp TACCTGAGTGCCGTGAGCTCCACCTTCTCATGGTCGTaGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: YLSAVSSTFSWS*VTSSGMRLRWE
Trigger: CTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000585814.1
ENST00000588918.5
CDS CAA 72 bp GTTCTGAGTGCCGTGAGCTCCACCTTCTCATGGTCGTaGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: VLSAVSSTFSWS*VTSSGMRLRWE
Trigger: CTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591878.1
CDS CAA 90 bp CAGGGACAGGTTCTGAGTGCCGTGAGCTCCACCTTCTCATGGTCGTaGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: QGQVLSAVSSTFSWS*VTSSGMRLRWEICV
Trigger: CACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGAACCTGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591878.1
CDS CAA 90 bp TGGCAGTGGCCCTGGCCTTGCCCACCCACACTGTGTCACCCCCAGTaGTTAAATACTCAGAACGACTCTCCAGCCCTTCCCTCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: WQWPWPCPPTLCHPQ*LNTQNDSPALPSRP
Trigger: TGGCCTCGAGGGAAGGGCTGGAGAGTCGTTCTGAGTATTTAACAACTGGGGGTGACACAGTGTGGGTGGGCAAGGCCAGGGCCACTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp AACGCATACCTGAGTGCCGTGAGCTCCACCTTCTCATaGTCGTTGGTGACGAGCTCCGGGATGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: NAYLSAVSSTFS*SLVTSSGMRLR
Trigger: CCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGGTATGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000585814.1
ENST00000588918.5
CDS CCA 72 bp CCCCTCCCTCCCTCCCTCCCTGGGTGTCAGGTTACATaGTGTTTGGTTTGGGGTCTTGCACGTGTCACTCGT +
Preference number: 6 (lower is better)
Translates to: PLPPSLPGCQVT*CLVWGLARVTR
Trigger: ACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAGGGAGGGAGGGAGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 72 bp GGGTGCAGGCTCTGGATGGCCATGACTGCCAGCCCATaGGCCACCTTATCCAAGAAGCTCATGGAGCCGTAC +
Preference number: 6 (lower is better)
Translates to: GCRLWMAMTASP*ATLSKKLMEPY
Trigger: GTACGGCTCCATGAGCTTCTTGGATAAGGTGGCCAATGGGCTGGCAGTCATGGCCATCCAGAGCCTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000398558.8
ENST00000588918.5
ENST00000589063.5
ENST00000589995.1
ENST00000615073.4
CDS CAA 90 bp GTGAACGCATACCTGAGTGCCGTGAGCTCCACCTTCTCATGGTCGTaGGTGACGAGCTCCGGGATGAGGCTGAGGTGGGAGATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: VNAYLSAVSSTFSWS*VTSSGMRLRWEICV
Trigger: CACACAGATCTCCCACCTCAGCCTCATCCCGGAGCTCGTCACCAACGACCATGAGAAGGTGGAGCTCACGGCACTCAGGTATGCGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355415.7
ENST00000389395.7
ENST00000585814.1
ENST00000588918.5
CDS CCA 72 bp AGTGAGCTGAGATCCGATGACTACACTCCAGCCCAATaGGACCGTTCGCCGAGGCCTTCATTAGCATGCCGG +
Preference number: 6 (lower is better)
Translates to: SELRSDDYTPAQ*DRSPRPSLACR
Trigger: CCGGCATGCTAATGAAGGCCTCGGCGAACGGTCCCATTGGGCTGGAGTGTAGTCATCGGATCTCAGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588626.1
CDS CCA 72 bp TGTGTCTGCGGCCGTCTCCAAGGACTGCAAACGCACTaGGAGCTTCGGCCACAGAAATGTTCGCCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: CVCGRLQGLQTH*ELRPQKCSPSE
Trigger: TTCAGAGGGCGAACATTTCTGTGGCCGAAGCTCCCAGTGCGTTTGCAGTCCTTGGAGACGGCCGCAGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CCA 72 bp TTCCAAAGCAGCTGCATCTGCCTCCTAGACATCCAATaGGACCGTTCGCCGAGGCCTTCATTAGCATGCCGG +
Preference number: 6 (lower is better)
Translates to: FQSSCICLLDIQ*DRSPRPSLACR
Trigger: CCGGCATGCTAATGAAGGCCTCGGCGAACGGTCCCATTGGATGTCTAGGAGGCAGATGCAGCTGCTTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586402.1
CDS CAA 72 bp CCTCCCTCCCTCCCTGGGTGTCAGGTTACATGGTGTTaGGTTTGGGGTCTTGCACGTGTCACTCGTTATTCC +
Preference number: 6 (lower is better)
Translates to: PPSLPGCQVTWC*VWGLARVTRYS
Trigger: GGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAGGGAGGGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp CCAAGAACAAATGTGTCTGCGGCCGTCTCCAAGGACTaGAAACGCACTGGGAGCTTCGGCCACAGAAATGTT +
Preference number: 6 (lower is better)
Translates to: PRTNVSAAVSKD*KRTGSFGHRNV
Trigger: AACATTTCTGTGGCCGAAGCTCCCAGTGCGTTTGCAGTCCTTGGAGACGGCCGCAGACACATTTGTTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp CCTCGGGCTGTCACAAATCGTGCTGCTGTGAGCCACTaGGTGCAGGTCTCATCCTGGGTGTATTTTACAAAC +
Preference number: 6 (lower is better)
Translates to: PRAVTNRAAVSH*VQVSSWVYFTN
Trigger: GTTTGTAAAATACACCCAGGATGAGACCTGCACGCAGTGGCTCACAGCAGCACGATTTGTGACAGCCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp AGGAAATGCCAGTCTGTTTTCCAAAGCAGCTGCATCTaGCTCCTAGACATCCAATGGGACCGTTCGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RKCQSVFQSSCI*LLDIQWDRSPR
Trigger: CCTCGGCGAACGGTCCCATTGGATGTCTAGGAGGCAGATGCAGCTGCTTTGGAAAACAGACTGGCATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586402.1
CDS CCA 72 bp CTCCCTCCCTCCCTGGGTGTCAGGTTACATGGTGTTTaGTTTGGGGTCTTGCACGTGTCACTCGTTATTCCT +
Preference number: 6 (lower is better)
Translates to: LPPSLGVRLHGV*FGVLHVSLVIP
Trigger: AGGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAGGGAGGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 72 bp CAAGGCCATGTCCTGAGGCTCTGGGCAGATGTGATTTaGGGGGTATACCAGTCACCCCGATACAGTGTCTAT +
Preference number: 6 (lower is better)
Translates to: QGHVLRLWADVI*GVYQSPRYSVY
Trigger: ATAGACACTGTATCGGGGTGACTGGTATACCCCCAAAATCACATCTGCCCAGAGCCTCAGGACATGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 90 bp CCTCCCTCCCTGGGTGTCAGGTTACATGGTGTTTGGTTTGGGGTCTaGCACGTGTCACTCGTTATTCCTAAAAGGCTCATGTGTGTGACG +
Preference number: 6 (lower is better)
Translates to: PPSLGVRLHGVWFGV*HVSLVIPKRLMCVT
Trigger: CGTCACACACATGAGCCTTTTAGGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAGGGAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 72 bp CTCCCTCCCTGGGTGTCAGGTTACATGGTGTTTGGTTaGGGGTCTTGCACGTGTCACTCGTTATTCCTAAAA +
Preference number: 6 (lower is better)
Translates to: LPPWVSGYMVFG*GSCTCHSLFLK
Trigger: TTTTAGGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAGGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 72 bp CTGGGTGTCAGGTTACATGGTGTTTGGTTTGGGGTCTaGCACGTGTCACTCGTTATTCCTAAAAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: LGVRLHGVWFGV*HVSLVIPKRLM
Trigger: CATGAGCCTTTTAGGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS CAA 90 bp ATTTCCAAACAAGGCCATGTCCTGAGGCTCTGGGCAGATGTGATTTaGGGGGTATACCAGTCACCCCGATACAGTGTCTATTATCAATTG +
Preference number: 6 (lower is better)
Translates to: ISKQGHVLRLWADVI*GVYQSPRYSVYYQL
Trigger: CAATTGATAATAGACACTGTATCGGGGTGACTGGTATACCCCCAAAATCACATCTGCCCAGAGCCTCAGGACATGGCCTTGTTTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585788.1
CDS GCA 72 bp TGGGTGTCAGGTTACATGGTGTTTGGTTTGGGGTCTTaGACGTGTCACTCGTTATTCCTAAAAGGCTCATGT +
Preference number: 6 (lower is better)
Translates to: WVSGYMVFGLGS*TCHSLFLKGSC
Trigger: ACATGAGCCTTTTAGGAATAACGAGTGACACGTGCAAGACCCCAAACCAAACACCATGTAACCTGACACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585788.1