RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFSD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000092931

Ensembl transcript IDs: ENST00000336509.8, ENST00000355954.7, ENST00000585584.5, ENST00000585692.5, ENST00000585865.1, ENST00000585958.5, ENST00000586622.5, ENST00000586689.5, ENST00000587661.5, ENST00000588031.5, ENST00000588460.5, ENST00000588647.1, ENST00000588670.5, ENST00000588768.5, ENST00000590070.1, ENST00000590393.1, ENST00000590514.5, ENST00000591864.1, ENST00000593181.5, ENST00000621483.4

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: WPSILNQGRIFQQEQEREVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
3UTR-3UTR TCA 90 bp CTACCAAAACGATTGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACCTAAAATTTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: LPKRLFLLSRPKRLPPKISGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...AATTTTAGGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588768.5
3UTR CAA 90 bp TGCACCAGGATGCCCAACAGCACAACTGGATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACCTAAAATTTCT +
Preference number: 2 (lower is better)
Translates to: CTRMPNSTTGFLPKR*FLLSRPKRLPPKIS
Trigger: AGAAATTTTAGGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGCATCCTGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588768.5
3UTR-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
3UTR-3UTR TCA 90 bp CCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: PCPGHQKTHLLLGHFQNLSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...CAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR TCA 90 bp TGCAACAGTGATGAAGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCCTTGCTTGTGACCTTTaGTGGAGACAGCTGCCATGT +
Preference number: 2 (lower is better)
Translates to: CNSDEVMRDCGFCLALVLLACDL*WRQLPC
Trigger: ACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAG...GAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATCACTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
3UTR-3UTR GCA 90 bp AGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCAGGTCACTCTCTAGACTaGAGAAGTGCCCAGAAAATC +
Preference number: 2 (lower is better)
Translates to: RLFWADSLTSMSWSSEDSGHSLD*RSAQKI
Trigger: GATTTTCTGGGCACTTCTGCAGTCTAGAGAGTGACC...TGAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588670.5
3UTR-3UTR TCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
3UTR-3UTR TCA 90 bp ACTGTCCCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGTCAAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 2 (lower is better)
Translates to: TVPTRLITVRAINTVLRSNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...TGACCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGGGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
3UTR-3UTR TCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: QLTEQLSLILLALNNSYLVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
3UTR-3UTR TCA 90 bp ATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: MSWSSEDSSSPRTFSESGSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...ACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
3UTR-3UTR CCA 90 bp GAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 2 (lower is better)
Translates to: ESGFRMRKNRTVPTRLITLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...GGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR CCA 90 bp GACTTTTTAAAAGCATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTCGTTGTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 2 (lower is better)
Translates to: DFLKASTAFVRLFWADSLFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR TCA 90 bp GAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 2 (lower is better)
Translates to: ESGFRMRKNRTVPTRLITNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...GGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR CCA 90 bp CCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 2 (lower is better)
Translates to: PNLFVAPIQVPYTPEKKVFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...AACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR GCA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATTTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 2 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYLNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
3UTR GCA 72 bp CAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTaGCATGTCGTAGGCTGCCCTGAGGACTACTCCGTA +
Preference number: 3 (lower is better)
Translates to: QLSLLVTFDGDS*HVVGCPEDYSV
Trigger: TACGGAGTAGTCCTCAGGGCAGCCTACGACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
3UTR-3UTR CAA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 3 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR TCA 72 bp GCACCTAACAGACAGAGTGCAACAGTGATGAAGTTATaGGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCT +
Preference number: 3 (lower is better)
Translates to: APNRQSATVMKL*ETAAFVLLSFS
Trigger: AGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATCACTGTTGCACTCTGTCTGTTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
3UTR-3UTR CAA 90 bp GACTTTTTAAAAGCATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTCGTTGACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 3 (lower is better)
Translates to: DFLKASTAFVRLFWADSLTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR GCA 72 bp GTAGAGATTTCCAAAGAACAAGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTTTCTCCCAATGCTGTG +
Preference number: 3 (lower is better)
Translates to: VEISKEQARLQK*PENPTVSPNAV
Trigger: CACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGCTTGTTCTTTGGAAATCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588031.5
3UTR CCA 72 bp AGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCTTCTCCTAGGACATTT +
Preference number: 3 (lower is better)
Translates to: RLFWADSLTSMS*SSEDSSSPRTF
Trigger: AAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR CAA 90 bp TGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAATTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 3 (lower is better)
Translates to: CSKFICSTNTGSIYTREEFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...TTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR CAA 90 bp ACTGTCCCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGTCATATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 3 (lower is better)
Translates to: TVPTRLITVRAINTVLRSYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...TGACCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGGGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588031.5
3UTR-3UTR CAA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 3 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
3UTR-3UTR CAA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCATTTGAACAATTACAGTaGACAGAACAGCTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: VILQHIWGMTYASHYYMAFEQLQ*TEQLSL
Trigger: AAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAAA...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
3UTR GCA 72 bp AAATGTCATTCTCCAACACATATGGGGAATGACATATaGTTCCCATTATTACATGGCAAAACATACTCCATA +
Preference number: 3 (lower is better)
Translates to: KCHSPTHMGNDI*FPLLHGKTYSI
Trigger: TATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCGAGCTTCCGCCGTCTaGGACCCGGGAGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRRASAV*DPGVAG
Trigger: CCCGGCCACTCCCGGGTCGCAGACGGCGGAAGCTCG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGAGATAATGGCGGCCTaGGCGGGAGCGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGEIMAA*AGARGR
Trigger: CCGCCCGCGCGCTCCCGCCCAGGCCGCCATTATCTC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR GCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGTGGACGGCCGCGAGCTaGGGGTGCAAATGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQWTAAS*GCKWRA
Trigger: AGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCA...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTGGACGGCCGCGAGCTaGGGGTGCAAATGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRWTAAS*GCKWRA
Trigger: AGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGAAACGTAGTCCCGGGTaGCCTGGCACGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQKRSPG*PGTRKR
Trigger: GCGCTTGCGCGTGCCAGGCCACCCGGGACTACGTTT...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCACGCGGAAGGCAACTaGCTGAGAGGCGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPHAEGN*LRGAAS
Trigger: CGACGCCGCGCCTCTCAGGCAGTTGCCTTCCGCGTG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGGTGGGGGCCCAGATaGGGAGCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRRWGPR*GAPPLP
Trigger: AGGAAGAGGAGGTGCTCCCCATCTGGGCCCCCACCT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCACCCCGCCTCGCGACTaGGGAAATGGCGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPTPPRD*GNGVWR
Trigger: CCGCCAGACGCCATTTCCCCAGTCGCGAGGCGGGGT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACGCTATGGATGCCATaGACGGGGCCGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRTLWMP*TGPCWT
Trigger: CGTCCAGCACGGCCCCGTCCATGGCATCCATAGCGT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCCTCGCCCGACACGCTaGGGCGCGTCTTCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPPRPTR*GASSRS
Trigger: ACTTCTCGAAGACGCGCCTCAGCGTGTCGGGCGAGG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTCGGGGCGAAGCCACTaGCAATCCGCACCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRSGRSH*QSAPRP
Trigger: CGGGCGAGGTGCGGATTGTCAGTGGCTTCGCCCCGA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTCCCAGCCTGACTCACTaGGGCCAGGCGACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRPSLTH*GQATGS
Trigger: TGACCCGGTCGCCTGGCCGCAGTGAGTCAGGCTGGG...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAGGTGGGGGCCCAGATaGGGAGCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGRWGPR*GAPPLP
Trigger: AGGAAGAGGAGGTGCTCCCCATCTGGGCCCCCACCT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGTGGGGAAATGGCGTCTaGCGGCGAGATAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQWGNGV*RRDNGG
Trigger: GCCGCCATTATCTCGCCGCCAGACGCCATTTCCCCA...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTGGGGAAATGGCGTCTaGCGGCGAGATAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRWGNGV*RRDNGG
Trigger: GCCGCCATTATCTCGCCGCCAGACGCCATTTCCCCA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCGAAGCGGGGCGCGGTaGGCCAATCAGAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRRSGAR*ANQKVS
Trigger: TGAAACCTTCTGATTGGCCCACCGCGCCCCGCTTCG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCGCGGGCTTTCCAACTaGCCGCTAATTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPRGLSN*PLIPLP
Trigger: GGGGAGCGGAATTAGCGGGCAGTTGGAAAGCCCGCG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAACCTCCTCTTCCTCCTaGCCAATCGCGATCGTCCGG +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGTSSSS*PIAIVR
Trigger: CCGGACGATCGCGATTGGGCAGGAGGAAGAGGAGGT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGCAGTCAGGAACGGCTaGACGGGGCCGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVAVRNG*TGPRDD
Trigger: GTCGTCTCTCGGCCCCGTCCAGCCGTTCCTGACTGC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGCAGTCAGGAACGGCTaGACGGGGCCGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPAVRNG*TGPRDD
Trigger: GTCGTCTCTCGGCCCCGTCCAGCCGTTCCTGACTGC...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTGAGATAATGGCGGCCTaGGCGGGAGCGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFEIMAA*AGARGR
Trigger: CCGCCCGCGCGCTCCCGCCCAGGCCGCCATTATCTC...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR TCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTCTCCTGGGCTGAAGTaGTCCTTCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRSPGLK*SFCLSL
Trigger: GAGGCTGAGACAGAAGGATCACTTCAGCCCAGGAGA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRLVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGCAGGTAAACGGGGCTaGGGGGACCGCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAAGKRG*GDRGRR
Trigger: CCGCCTCCCGCGGTCCCCTCAGCCCCGTTTACCTGC...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGCAGGTAAACGGGGCTaGGGGGACCGCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREAGKRG*GDRGRR
Trigger: CCGCCTCCCGCGGTCCCCTCAGCCCCGTTTACCTGC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCATTTTGGCTCAGCTCTaGCGGAGGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPILAQL*RRQQPR
Trigger: CCTGGGCTGCTGCCTCCGGCAGAGCTGAGCCAAAAT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGCGAGCTTCCGCCGTCTaGGACCCGGGAGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVRASAV*DPGVAG
Trigger: CCCGGCCACTCCCGGGTCGCAGACGGCGGAAGCTCG...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACGAGCTTCCGCCGTCTaGGACCCGGGAGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPRASAV*DPGVAG
Trigger: CCCGGCCACTCCCGGGTCGCAGACGGCGGAAGCTCG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCAGGTACGGGGGCGGTaGCTACGGACGCCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAQVRGR*LRTPEP
Trigger: CGGCTCCGGCGTCCGTAGCCACCGCCCCCGTACCTG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATCTCCTGGGCTGAAGTaGTCCTTCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGSPGLK*SFCLSL
Trigger: GAGGCTGAGACAGAAGGATCACTTCAGCCCAGGAGA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR GCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGAATTAACCCCGCTGTaGTTGCTCGTCCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVELTPL*LLVPPA
Trigger: TGCGGGCGGGACGAGCAAGCACAGCGGGGTTAATTC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTCAGTTGTTACTCAGGTaGGCTAGCCTGCGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRQLLLR*ASLRSP
Trigger: CGGGCTCCGCAGGCTAGCGCACCTGAGTAACAACTG...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCCAGGTACGGGGGCGGTaGCTACGGACGCCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSQVRGR*LRTPEP
Trigger: CGGCTCCGGCGTCCGTAGCCACCGCCCCCGTACCTG...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPLVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCGCACCGCCCAGAGCTaGGGAAGCCGGCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSRTAQS*GSRRQF
Trigger: GAACTGGCGCCGGCTTCCTCAGCTCTGGGCGGTGCG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCGGAAGGCAACTGCCTaGGAGGCGCGGCGTCGCACC +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSRKATA*EARRRT
Trigger: GGTGCGACGCCGCGCCTCTCAGGCAGTTGCCTTCCG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACCCTCCCTCCAGCCGTaGCTCCGCGCTTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPPSLQP*LRAFWP
Trigger: GGGCCAAAAAGCGCGGAGTCACGGCTGGAGGGAGGG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCTTGTGACCTTCACTGCAGCCTaGAGAGACATGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ERLRLLSCSRSLQLSLLVTFTAA*RDMDCS
Trigger: GCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGGT...CACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATGGACGGCCGCGAGCTaGGGGTGCAAATGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPWTAAS*GCKWRA
Trigger: AGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTACCCCGCCTCGCGACTaGGGAAATGGCGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPATPPRD*GNGVWR
Trigger: CCGCCAGACGCCATTTCCCCAGTCGCGAGGCGGGGT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR CCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGGTTTCATTTCCGGGTaGCGCGGGCGCCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVGFISG*RGRHFV
Trigger: CACAAAATGGCGCCCGCGCCACCCGGAAATGAAACC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR TCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGCATGATGAAGGGCAGAGGGCGATCTTTAGCCAATAGCCATAAGAAACCAAGACAGGCCCTCCCCCAGTaGAGCCTGGAACACACCTTC +
Preference number: 4 (lower is better)
Translates to: SMMKGRGRSLANSHKKPRQALPQ*SLEHTF
Trigger: GAAGGTGTGTTCCAGGCTTCACTGGGGGAGGGCCTG...TCTTGGTTTCTTATGGCTATTGGCTAAAGATCGCCCTCTGCCCTTCATCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCCTCGCCCGACACGCTaGGGCGCGTCTTCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAPRPTR*GASSRS
Trigger: ACTTCTCGAAGACGCGCCTCAGCGTGTCGGGCGAGG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTCGGGGCGAAGCCACTaGCAATCCGCACCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALSGRSH*QSAPRP
Trigger: CGGGCGAGGTGCGGATTGTCAGTGGCTTCGCCCCGA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGAAGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAATTGATTTTGGCTCAGCTCTaGCGGAGGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSAQKIPLFLPMLCSSELILAQL*RRQQPR
Trigger: CCTGGGCTGCTGCCTCCGGCAGAGCTGAGCCAAAAT...CAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR GCA 90 bp TTTGATGGAGACAGCTGCCATGTCGTAGGCTGCCCTGAGGACTACTCCGTAGCACAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FDGDSCHVVGCPEDYSVAQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...TGCTACGGAGTAGTCCTCAGGGCAGCCTACGACATGGCAGCTGTCTCCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCTTGTGGGAACACACCTTCACTaGAGCCTGCAGAGACATGGA +
Preference number: 4 (lower is better)
Translates to: ERLRLLSCSRSLQLSLLVGTHLH*SLQRHG
Trigger: TCCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTCC...CACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR GCA 90 bp AGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCTTGTGACCCTGCGGCTTTTGTCTTaGTCTCGTTCTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLRLLSCSRSLQLSLLVTLRLLS*SRSLQL
Trigger: CAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAG...GGTCACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCAGTCAGGAACGGCTaGACGGGGCCGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPAVRNG*TGPRDD
Trigger: GTCGTCTCTCGGCCCCGTCCAGCCGTTCCTGACTGC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTAGCCTCCCCAACAGCTaGGAGTATAGCGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRSLPNS*EYSGAT
Trigger: TGTTGCACCGCTATACTCCCAGCTGTTGGGGAGGCT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACAGGTACGGGGGCGGTaGCTACGGACGCCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPQVRGR*LRTPEP
Trigger: CGGCTCCGGCGTCCGTAGCCACCGCCCCCGTACCTG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
3UTR CAA 72 bp CGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTaGCTTGTGACCTTTGATGGAGACAGCTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: RLLSCSRSLQLS*LVTFDGDSCHV
Trigger: GACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTACAGGGAGAGGCAAATaGGGGCAGAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRTGRGK*GQKHSS
Trigger: TGAAGAGTGCTTCTGCCCTCATTTGCCTCTCCCTGT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTTTATCCGCTCCAGGTTaGGGGGCCCACGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFLSAPG*GAHEGD
Trigger: ATCCCCTTCGTGGGCCCCTCAACCTGGAGCGGATAA...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR TCA 90 bp CGTTCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCCTTGCTTGTGACCTTTaGTGGAGACAGCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: RSLQLSLLVTFDGDSCHVLACDL*WRQLPC
Trigger: ACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAG...GACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGCGACAAGCGCGACGCTaGGGACGCTATGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVRQARR*GRYGCH
Trigger: ATGGCATCCATAGCGTCCTCAGCGTCGCGCTTGTCG...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCTTGTGCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ERLRLLSCSRSLQLSLLVLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...CACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR GCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGGTTGCTGTAGAAAAATaGCACGGCTGCGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQVAVEK*HGCANR
Trigger: TCTATTTGCGCAGCCGTGGCATTTTTCTACAGCAAC...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQEGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSREGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGCGGAGCCCGTCCGTaGTGTTCTGCGGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALCGARP*CSAARP
Trigger: AGGCCTTGCCGCAGAACAGCACGGACGGGCTCCGCA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR GCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGGCGCAGAGGCCGGCTaGCCGCCCAGTTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALGAEAG*PPSCYS
Trigger: TGAGTAACAACTGGGCGGGCAGCCGGCCTCTGCGCC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTGCAGTCAGGAACGGCTaGACGGGGCCGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAAVRNG*TGPRDD
Trigger: GTCGTCTCTCGGCCCCGTCCAGCCGTTCCTGACTGC...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACTGGCGAAAGGGGGTTaGGAAGCGGACTCCGGCGAA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLAKGG*EADSGE
Trigger: TTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTTGATGGAGACAGCTGCCATGTCGTAGGCTGCCCTGAGGACTACTCCGTAGCAGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: FDGDSCHVVGCPEDYSVAEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...TGCTACGGAGTAGTCCTCAGGGCAGCCTACGACATGGCAGCTGTCTCCATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTAAACGTAGTCCCGGGTaGCCTGGCACGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAKRSPG*PGTRKR
Trigger: GCGCTTGCGCGTGCCAGGCCACCCGGGACTACGTTT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGAAACGTAGTCCCGGGTaGCCTGGCACGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALKRSPG*PGTRKR
Trigger: GCGCTTGCGCGTGCCAGGCCACCCGGGACTACGTTT...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTACGCTGAGGACGCTATaGATGCCATGGACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPATLRTL*MPWTGP
Trigger: CGGCCCCGTCCATGGCATCCATAGCGTCCTCAGCGT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGACGCTGAGGACGCTATaGATGCCATGGACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVTLRTL*MPWTGP
Trigger: CGGCCCCGTCCATGGCATCCATAGCGTCCTCAGCGT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CGTTCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCCAGTCTGTGAGGAACTaGCTCCTGCAACAACTATAC +
Preference number: 4 (lower is better)
Translates to: RSLQLSLLVTFDGDSCHVQSVRN*LLQQLY
Trigger: GTATAGTTGTTGCAGGAGTCAGTTCCTCACAGACTG...GACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp TCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCGTAAGCTGTCCTTGCTTGTaGCCTTTGATGGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: SLQLSLLVTFDGDSCHVVSCPCL*PLMETA
Trigger: AGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCT...TACGACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATGCAGGTAAACGGGGCTaGGGGGACCGCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYAGKRG*GDRGRR
Trigger: CCGCCTCCCGCGGTCCCCTCAGCCCCGTTTACCTGC...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCGACAAGCGCGACGCTaGGGACGCTATGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPARQARR*GRYGCH
Trigger: ATGGCATCCATAGCGTCCTCAGCGTCGCGCTTGTCG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCACCTCGCCCGACACGCTaGGGCGCGTCTTCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMAPRPTR*GASSRS
Trigger: ACTTCTCGAAGACGCGCCTCAGCGTGTCGGGCGAGG...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTATTTTGGCTCAGCTCTaGCGGAGGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAILAQL*RRQQPR
Trigger: CCTGGGCTGCTGCCTCCGGCAGAGCTGAGCCAAAAT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGTGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSREKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCCAGCCTGACTCACTaGGGCCAGGCGACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPPSLTH*GQATGS
Trigger: TGACCCGGTCGCCTGGCCGCAGTGAGTCAGGCTGGG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CCA 90 bp GGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GFRMRKNRTVPTRLITVRIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...CCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGACGCTATGGATGCCATaGACGGGGCCGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALTLWMP*TGPCWT
Trigger: CGTCCAGCACGGCCCCGTCCATGGCATCCATAGCGT...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAATCGGGGCGAAGCCACTaGCAATCCGCCAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKSGRSH*QSARTQ
Trigger: CTGCGTCCTGGCGGATTGTCAGTGGCTTCGCCCCGA...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336509.8
CDS-3UTR TCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTTGATGGAGACAGCTGCCATGTCGTAGGCTGCCCTGAGGACTACTCCGTAGCATTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: FDGDSCHVVGCPEDYSVAFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...TGCTACGGAGTAGTCCTCAGGGCAGCCTACGACATGGCAGCTGTCTCCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTATCCGCTCCAGGTTaGGGGGCCCACGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSLSAPG*GAHEGD
Trigger: ATCCCCTTCGTGGGCCCCTCAACCTGGAGCGGATAA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCCGACAAGCGCGACGCTaGGGACGCTATGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSRQARR*GRYGCH
Trigger: ATGGCATCCATAGCGTCCTCAGCGTCGCGCTTGTCG...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTATTTTGGCTCAGCTCTaGCGGAGGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAILAQL*RRQQPR
Trigger: CCTGGGCTGCTGCCTCCGGCAGAGCTGAGCCAAAAT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTATTTTGGCTCAGCTCTaGCGGAGGCAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSILAQL*RRQQPR
Trigger: CCTGGGCTGCTGCCTCCGGCAGAGCTGAGCCAAAAT...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGEKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCACGCGGGCTTTCCAACTaGCCGCTAATTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMARGLSN*PLIPLP
Trigger: GGGGAGCGGAATTAGCGGGCAGTTGGAAAGCCCGCG...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355954.7
CDS-3UTR GCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTACCTCCTCTTCCTCCTaGCCAATCGCGATCGTCCGG +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQATSSSS*PIAIVR
Trigger: CCGGACGATCGCGATTGGGCAGGAGGAAGAGGAGGT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR GCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCCGTCCGTGCTGTTCTaGGGCAAGGCCTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSPSVLF*GKAFPS
Trigger: ACTGGGAAAGGCCTTGCCGCAGAACAGCACGGACGG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GTGACCTTTGATGGAGACAGCTGCCATGTCGTAGGCTGCCCTGAGGACTACTCCGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: VTFDGDSCHVVGCPEDYSENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...GGAGTAGTCCTCAGGGCAGCCTACGACATGGCAGCTGTCTCCATCAAAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGATTCTCCAACACATATaGGGAATGACATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQILQHI*GMTYAS
Trigger: GGAAGCATATGTCATTCCCCATATGTGTTGGAGAAT...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATTCTCCAACACATATaGGGAATGACATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRILQHI*GMTYAS
Trigger: GGAAGCATATGTCATTCCCCATATGTGTTGGAGAAT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TGCAACAGTGATGAAGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCCCCAGTGAAGCCTaGAACACACCTTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: CNSDEVMRDCGFCLALVLSPSEA*NTPSLQ
Trigger: CTGCAGTGAAGGTGTGTTCCAGGCTTCACTGGGGGA...GAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATCACTGTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAACGCTATGGATGCCATaGACGGGGCCGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMATLWMP*TGPCWT
Trigger: CGTCCAGCACGGCCCCGTCCATGGCATCCATAGCGT...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000621483.4
3UTR CAA 72 bp ATGCCCAACAGCACAACTGGATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: MPNSTTGFLPKR*FLLSRPKRLPP
Trigger: AGGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR TCA 90 bp GTCCCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGTCACTCGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: VPTRLITVRAINTVLRSLANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...GAGTGACCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
CDS-3UTR TCA 90 bp TGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGAACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: CQIVLGRLVDFHVLVIRRTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...TCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGGCATCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FRMRKNRTVPTRLITVRASGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...TGCCCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTCTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGTTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQLNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCCCGATGTGGAGGGTATaGCCTCCCTCAAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSPMWRV*PPSRWT
Trigger: TGTCCACCTTGAGGGAGGTCATACCCTCCACATCGG...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGCATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SIYCLCQIVLGRLVDFHVQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...GACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR GCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGTTGCTGTAGAAAAATaGCACGGCTGCGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVVAVEK*HGCANR
Trigger: TCTATTTGCGCAGCCGTGGCATTTTTCTACAGCAAC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTTGCTGTAGAAAAATaGCACGGCTGCGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRVAVEK*HGCANR
Trigger: TCTATTTGCGCAGCCGTGGCATTTTTCTACAGCAAC...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIREGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAATGGGGAATGACATATaGTTCCCATTATTACATGGC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGMGNDI*FPLLHG
Trigger: GCCATGTAATAATGGGAAGCATATGTCATTCCCCAT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATCATCCAGGCTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPSSRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCTGGATGA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR GCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCTGAAGAGAGGGGTCTaGAGAAAGGATGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPLKRGV*RKDVYE
Trigger: TTCATACACATCCTTTCTGCAGACCCCTCTCTTCAG...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586622.5
CDS-3UTR GCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAGAATTAACCCCGCTGTaGTTGCTCGTCCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMAELTPL*LLVPPA
Trigger: TGCGGGCGGGACGAGCAAGCACAGCGGGGTTAATTC...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586622.5
CDS-3UTR CCA 90 bp TCAGAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SESGFRMRKNRTVPTRLIIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...GATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
CDS-3UTR CCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTATTCCGGGGACATTTTaGCTCAGCTCTGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAIPGTF*LSSAGG
Trigger: GCCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAAT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAATTCTCCAACACATATaGGGAATGACATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGILQHI*GMTYAS
Trigger: GGAAGCATATGTCATTCCCCATATGTGTTGGAGAAT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAAGCCTCCCCAACAGCTaGGAGTATAGCGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPSLPNS*EYSGAT
Trigger: TGTTGCACCGCTATACTCCCAGCTGTTGGGGAGGCT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp TGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGAGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: CQIVLGRLVDFHVLVIRRANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...TCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTCTCCTGGGCTGAAGTaGTCCTTCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQASPGLK*SFCLSL
Trigger: GAGGCTGAGACAGAAGGATCACTTCAGCCCAGGAGA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSLVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR GCA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIREKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCATGGGGAATGACATATaGTTCCCATTATTACATGGC +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPMGNDI*FPLLHG
Trigger: GCCATGTAATAATGGGAAGCATATGTCATTCCCCAT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGTCAGGTGCGCTAGCCTaGGGAGCCCGTCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLSGALA*GARPCC
Trigger: ACAGCACGGACGGGCTCCGCAGGCTAGCGCACCTGA...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CCA 90 bp TTTGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: FVRLFWADSLTSMSWSSEDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...TTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCGTAGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: SLQLSLLVTFDGDSCHVVAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...TACGACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CCA 90 bp CGTTCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RSLQLSLLVTFDGDSCHVKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...GACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTACAGGGAGAGGCAAATaGGGGCAGAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSTGRGK*GQKHSS
Trigger: TGAAGAGTGCTTCTGCCCTCATTTGCCTCTCCCTGT...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGACAGGGAGAGGCAAATaGGGGCAGAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALTGRGK*GQKHSS
Trigger: TGAAGAGTGCTTCTGCCCTCATTTGCCTCTCCCTGT...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGCAGAAGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: LQKCPENPTVSPNAVLIRVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...TCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACTTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQASGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GATGAAGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DEVMRDCGFCLALVLSSCLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...ACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACTCAATCTCCTGGGCTaGAGTGATCCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLNLLG*SDPSVS
Trigger: TGAGACAGAAGGATCACTTCAGCCCAGGAGATTGAG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp AGCATGATGAAGGGCAGAGGGCGATCTTTAGCCAATAGCCATAAGAAACCAAGACCGACCCACAGAAACTaGACAAACTTGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: SMMKGRGRSLANSHKKPRPTHRN*TNLKMA
Trigger: TGCCATCTTCAAGTTTGTTCAGTTTCTGTGGGTCGG...TCTTGGTTTCTTATGGCTATTGGCTAAAGATCGCCCTCTGCCCTTCATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTCCTGGAGAAAGAAATaGGATGGTGAGTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVSWRKK*DGEWRR
Trigger: CCTTCTCCACTCACCATCTCATTTCTTTCTCCAGGA...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCGGGGCGAAGCCACTaGCAATCCTGGAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSSGRSH*QSWRKK
Trigger: TTTCTTTCTCCAGGATTGTCAGTGGCTTCGCCCCGA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTATGGGGAATGACATATaGTTCCCATTATTACATGGC +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPMGNDI*FPLLHG
Trigger: GCCATGTAATAATGGGAAGCATATGTCATTCCCCAT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTCATCCAGGCTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHSSRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCTGGATGA...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR GCA 90 bp CTACCAAAACGATTGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACCTAAAATTGGTCACTCTCTAGACTaGAGAAGTGCCCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: LPKRLFLLSRPKRLPPKIGHSLD*RSAQKI
Trigger: GATTTTCTGGGCACTTCTGCAGTCTAGAGAGTGACC...AATTTTAGGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR CCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGACGCTGAGGACGCTATaGATGCCATGGACGGGGCCG +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLTLRTL*MPWTGP
Trigger: CGGCCCCGTCCATGGCATCCATAGCGTCCTCAGCGT...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLTSMSWSSEDSSSPRTFSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...AAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR TCA 90 bp GGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: GFRMRKNRTVPTRLITVRSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...CCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR TCA 90 bp CTAGACTGCAGAAGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCAAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LDCRSAQKIPLFLPMLCSNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...TGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR TCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCATTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RLFWADSLTSMSWSSEDSFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...TGAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp TTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LFWADSLTSMSWSSEDSSFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp GATGAAGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: DEVMRDCGFCLALVLSSCLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...ACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERETQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPLNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAATTGATTCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: SAQKIPLFLPMLCSSELILLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...AATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGCAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCTTGAAGATGGCAAATaGTGGGGCGCTGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSLEDGK*WGAVFR
Trigger: TCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGTTGCTGTAGAAAAATaGCACGGCTGCGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVVAVEK*HGCANR
Trigger: TCTATTTGCGCAGCCGTGGCATTTTTCTACAGCAAC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFEGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVEGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCACCACACCCAGCTTTaGTATTTATTTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPHHTQL*YLFKCH
Trigger: ATGACATTTAAATAAATAGCAAAGCTGGGTGTGGTG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGTCACTCTCTTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: PTRLITVRAINTVLRSLSLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...AGAGAGTGACCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTTGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAATTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: FVRLFWADSLTSMSWSSEFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...TTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAATCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERESSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGAAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: CQIVLGRLVDFHVLVIRRNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...TCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCATCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAACTTCTTTGCTGGATTTaGTGTAAGCACTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERELLCWI*CKHCCQ
Trigger: CTGACAGCAGTGCTTACATCAAATCCAGCAAAGAAG...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCACTCAATCTCCTGGGCTaGAGTGATCCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMALNLLG*SDPSVS
Trigger: TGAGACAGAAGGATCACTTCAGCCCAGGAGATTGAG...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGTGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GFRMRKNRTVPTRLITVRCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...CCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVEKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREEGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGGAAGGAGAAGGTAGTTaGTGTAGAAAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVEGEGS*CRKMPR
Trigger: CCGTGGCATTTTTCTACAGCAACTACCTTCTCCTTC...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHDHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAGACCACGGGAAAGGCTaGATGAAAACGGCAATGTAC +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMADHGKG*MKTAMY
Trigger: GTACATTGCCGTTTTCATCCAGCCTTTCCCGTGGTC...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCAACTTCCAGTTCCTaGATCGGAACCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSSTSSS*IGTPGL
Trigger: TAAACCTGGGGTTCCGATCCAGGAACTGGAAGTTGA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACGGGAAAGGCTGGATaGAAACGGCAATGTACATGC +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKTGKAG*KRQCTC
Trigger: GCATGTACATTGCCGTTTTCATCCAGCCTTTCCCGT...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAATTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERELDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYVQLCF*GHTCPL
Trigger: GAGGGGACACGTATGACCTCAGAAACACAGCTGGAC...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERENTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQALLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAATGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQERECWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AGAACTGTCCCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: RTVPTRLITVRAINTVLRKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...CCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGGGACAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAACAAAACGATTGTTCTTaGTCAGCAGGCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKQNDCS*SAGRRG
Trigger: GCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAEKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGAAAAATGCCACGGCTaGGCAAATAGACTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREEKCHG*ANRLNK
Trigger: TTTGTTCAGTCTATTTGCGCAGCCGTGGCATTTTTC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGTTGCTGTAGAAAAATaGCACGGCTGCGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALVAVEK*HGCANR
Trigger: TCTATTTGCGCAGCCGTGGCATTTTTCTACAGCAAC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATTCATCCAGGCTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYSSRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCTGGATGA...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: WPSILNQGRIFQQEQEREAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: VILQHIWGMTYASHYYMAEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPARCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTCTTCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGATCACTCTCTGATATCTaGGTTTTCCCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFCSKFICSTNTGSIYTRSLSDI*VFPCQA
Trigger: TGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGA...TCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR TCA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTTCTTCGGTCACTCTCTaGTATCTGAGTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPSSVTL*YLSFPL
Trigger: CAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGA...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR TCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPANLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCTCTGGGCAGACTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LFVAPIQVPYTPEKKVNSSGQTR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGA...GGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTTAGATAAAAAGCTATaGAGTGCACCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALLDKKL*SAPGCP
Trigger: TGGGCATCCTGGTGCACTTCATAGCTTTTTATCTAA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAACCCAAATATCACCATaGCCAGGAGTTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPTQISP*PGVASE
Trigger: TTCACTGGCAACTCCTGGTCATGGTGATATTTGGGT...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTCTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp TTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCATGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: LTSMSWSSEDSSSPRTFSCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...TGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp TTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCATTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: LTSMSWSSEDSSSPRTFSFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...TGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp ATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: MSWSSEDSSSPRTFSESGFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...ACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp TGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: CPGHQKTHLLLGHFQNLVFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...AACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGGCTAGACTGCAGAAGTaGCCAGAAAATCCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SAPNLFVAPIQVPYTPEKARLQK*PENPTV
Trigger: AACAGTGGGATTTTCTGGGCACTTCTGCAGTCTAGC...CTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR GCA 90 bp GACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSLTSMSWSSEDSSSPRTFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...TGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGATGGGGAATGACATATaGTTCCCATTATTACATGGC +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVMGNDI*FPLLHG
Trigger: GCCATGTAATAATGGGAAGCATATGTCATTCCCCAT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQALTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: MSWSSEDSSSPRTFSESGLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...ACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAGAAGATGGCAAATGCTaGGGCGCTGTCTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPEDGKC*GAVFRI
Trigger: TATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTC...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAATTCTCCAACACATATaGGGAATGACATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPILQHI*GMTYAS
Trigger: GGAAGCATATGTCATTCCCCATATGTGTTGGAGAAT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGACATTTCCACAAGTTTaGAAGGCAGTGAACATAAAC +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVTFPQV*KAVNIN
Trigger: GTTTATGTTCACTGCCTTTCAAACTTGTGGAAATGT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQANLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGAACACATATGGGGAATaGCATATGCTTCCCATTATT +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVNTYGE*HMLPII
Trigger: AATAATGGGAAGCATATGTCATTCCCCATATGTGTT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATCTCAATCTCCTGGGCTaGAGTGATCCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYLNLLG*SDPSVS
Trigger: TGAGACAGAAGGATCACTTCAGCCCAGGAGATTGAG...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR TCA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACAGAAAGGATGTGTATaGAGCTTAGATAATAATGGC +
Preference number: 4 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPQKGCV*SLDNNG
Trigger: GCCATTATTATCTAAGCTTCATACACATCCTTTCTG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586622.5
CDS-3UTR GCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPLLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAGGTCACTCTCTAGACTaGAGAAGTGCCCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: CSKFICSTNTGSIYTREEGHSLD*RSAQKI
Trigger: GATTTTCTGGGCACTTCTGCAGTCTAGAGAGTGACC...TTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp GGCAAAATATATGTAGAGATTTCCAAAGAACAAGCTAGACTGCAGAAGTGCCCATTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: GKIYVEISKEQARLQKCPLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...TGGGCACTTCTGCAGTCTAGCTTGTTCTTTGGAAATCTCTACATATATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR CCA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: NITQYIVKIKGDFFHQALENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGCTTCCCATTATTACATaGCAAAACATACTCCATATC +
Preference number: 4 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVLPIIT*QNILHI
Trigger: GATATGGAGTATGTTTTGCCATGTAATAATGGGAAG...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGATTTGTCAGATTGTTCTaGGCAGACTCGATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FVAPIQVPYTPEKKVNSRFVRLF*ADSMQG
Trigger: ACCCTGCATCGAGTCTGCCCAGAACAATCTGACAAA...TCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR TCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp TTCTTCGGTCACTCTCTGATATCTGAGTTTTCCCTTGCCAGGCAAAATATATGTCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: FFGHSLISEFSLARQNICRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...ACATATATTTTGCCTGGCAAGGGAAAACTCAGATATCAGAGAGTGACCGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR TCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGGCAAACATAGAGAGTTaGGGTCCTACAATGGCAACC +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLANIES*GPTMAT
Trigger: GGTTGCCATTGTAGGACCTCAACTCTCTATGTTTGC...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCGAATGAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: SSEDSSSPRTFSESGFRMNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...CATTCGGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSLNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTGAACAATTACAGTTaGCAGAACAGCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQALNNYS*QNSFPL
Trigger: TAAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAAACCCAGTGTTCGTTaGCTTCCATGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LFVAPIQVPYTPEKKVNSKPSVR*LPCPGH
Trigger: ATGACCAGGACATGGAAGTCAACGAACACTGGGTTT...GGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR GCA 90 bp TGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAACTCCTGATGACAGTTTaGGCCACATTTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: CSKFICSTNTGSIYTREELLMTV*ATFPQV
Trigger: AACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAG...TTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAATGCTGGTATATCCACTaGCGTGAAAATCTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKCWYIH*RENLSY
Trigger: ATAGGACAGATTTTCACGGCAGTGGATATACCAGCA...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAATTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTC +
Preference number: 4 (lower is better)
Translates to: SAPNLFVAPIQVPYTPEKFLPML*SSELIV
Trigger: GACAATCAATTCGGATGAGCACAGCATTGGGAGAAA...CTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCATTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCTTCCCATTATTACATaGCAAAACATACTCCATATC +
Preference number: 4 (lower is better)
Translates to: QYIVKIKGDFFHQALCPALPIIT*QNILHI
Trigger: GATATGGAGTATGTTTTGCCATGTAATAATGGGAAG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp GCAGTTGTAATACTAAGAAGGAGCATCTCCTTGGTGACACATAACTTAAAAGACGTATATCCACTGCCGTaGAAATCTGTCCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: AVVILRRSISLVTHNLKDVYPLP*KSVLFK
Trigger: CTTAAATAGGACAGATTTTCACGGCAGTGGATATAC...GTCTTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCTTAGTATTACAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp CTCTTCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGACGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: LFCSKFICSTNTGSIYTRRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...TCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPNLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TCTTCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAATCTGGTTTCCGAATaGGAAAGAATAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: SSAPNLFVAPIQVPYTPENLVSE*ERIELS
Trigger: GGACAGTTCTATTCTTTCTCATTCGGAAACCAGATT...CTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACAACACATATGGGGAATaGCATATGCTTCCCATTATT +
Preference number: 4 (lower is better)
Translates to: SILNITQYIVKIKGDFFHNTYGE*HMLPII
Trigger: AATAATGGGAAGCATATGTCATTCCCCATATGTGTT...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCACCACACCCAGCTTTaGTATTTATTTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSHHTQL*YLFKCH
Trigger: ATGACATTTAAATAAATAGCAAAGCTGGGTGTGGTG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR CCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGTTTGTCAGATTGTTCTaGGCAGACTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLFVRLF*ADSLTS
Trigger: GGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGAGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: FVAPIQVPYTPEKKVNSRAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...TCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR CCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPKILSS*VLKQLS
Trigger: AGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTT...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CCA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCCTTCCCATTATTACATaGCAAAACATACTCCATATC +
Preference number: 4 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSLPIIT*QNILHI
Trigger: GATATGGAGTATGTTTTGCCATGTAATAATGGGAAG...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: FVAPIQVPYTPEKKVNSRRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...TCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGTTTCTCCAATGCCGATaGAAATGCCAGAAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLFLQCR*KCQKVQ
Trigger: TTGGACTTTCTGGCATTTTCATCGGCATTGGAGAAA...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATAACACCAACTCTGGCTaGTTTAACAGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYNTNSG*FNSLNP
Trigger: GGGATTAAGACTGTTAAATCAGCCAGAGTTGGTGTT...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAAACACATATGGGGAATaGCATATGCTTCCCATTATT +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKNTYGE*HMLPII
Trigger: AATAATGGGAAGCATATGTCATTCCCCATATGTGTT...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR TCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAAACACATATGGGGAATaGCATATGCTTCCCATTATT +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPNTYGE*HMLPII
Trigger: AATAATGGGAAGCATATGTCATTCCCCATATGTGTT...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp TTTTCAGAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTATTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FSESGFRMRKNRTVPTRLFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...TAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTCTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp TTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCTTGACTTCCATGTCCTaGTCATCAGAAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: LFVAPIQVPYTPEKKVNSLTSMS*SSEDSS
Trigger: AGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA...GGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGGCCCAACAGCACAACTaGATTTCTACCAAAACGATT +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLAQQHN*ISTKTI
Trigger: AATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGC...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR TCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATCGGTGTAATCAAATTTaGAGCAGAGAACACTCCATA +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYRCNQI*SREHSI
Trigger: TATGGAGTGTTCTCTGCTTCAAATTTGATTACACCG...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAACACCACACCCAGCTTTaGTATTTATTTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKHHTQL*YLFKCH
Trigger: ATGACATTTAAATAAATAGCAAAGCTGGGTGTGGTG...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000621483.4
CDS-3UTR CCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATGAAAACTGCAGAGAATaGCAACTTCTTTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYENCRE*QLLCWI
Trigger: AATCCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTC...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CCA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTTCCCATTATTACATaGCAAAACATACTCCATATC +
Preference number: 4 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPLPIIT*QNILHI
Trigger: GATATGGAGTATGTTTTGCCATGTAATAATGGGAAG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGAAACGGCAATGTACATaGTGTAAAATAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: QLTEQLSLILLALNNSYLKRQCT*CKINHW
Trigger: CCAGTGGTTTATTTTACAGCATGTACATTGCCGTTT...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR GCA 90 bp CCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PNLFVAPIQVPYTPEKKVFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...AACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR GCA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATTTTAAAAGCATCTACTaGCTTTGTCAGATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYFKSIY*LCQIVL
Trigger: CAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAA...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS CCA 90 bp CGCGGGAGGCCCGGGCGACCTCACAAAGGTCCGCGGCGAAGCACGTaGTGCGGGCCCGGACGGGGCGGGGGTGCACGCCGCGTCTCGCGA +
Preference number: 5 (lower is better)
Translates to: RGRPGRPHKGPRRST*CGPGRGGGARRVSR
Trigger: TCGCGAGACGCGGCGTGCACCCCCGCCCCGTCCGGGCCCGCACCACGTGCTTCGCCGCGGACCTTTGTGAGGTCGCCCGGGCCTCCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586622.5
ENST00000588460.5
ENST00000621483.4
CDS GCA 90 bp GTTCTGCGGCAAGGCCTTTCCCAGTGTCCCCACGCGGAAGGCAACTaGCTGAGAGGCGCGGCGTCGCACCGCCCAGAGCTGAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: VLRQGLSQCPHAEGN*LRGAASHRPELRKP
Trigger: CGGCTTCCTCAGCTCTGGGCGGTGCGACGCCGCGCCTCTCAGGCAGTTGCCTTCCGCGTGGGGACACTGGGAAAGGCCTTGCCGCAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 90 bp GAGTCCCCACCGCCAGGACGCAGAGCCGACGGAGCTCTCGGGCTCTaGCGAAAGGGGGTTGGGAAGCGGACTCCGGCGAAGAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: ESPPPGRRADGALGL*RKGVGKRTPAKSSQ
Trigger: CTGACTGCTCTTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGAGCCCGAGAGCTCCGTCGGCTCTGCGTCCTGGCGGTGGGGACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355954.7
ENST00000586689.5
ENST00000587661.5
ENST00000588460.5
ENST00000590393.1
ENST00000593181.5
CDS GCA 90 bp GCAGAGGCCGGCTGCCCGCCCAGTTGTTACTCAGGTGCGCTAGCCTaGGGAGCCCGTCCGTGCTGTTCTGCGGCAAGGCCTTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: AEAGCPPSCYSGALA*GARPCCSAARPFPV
Trigger: CACTGGGAAAGGCCTTGCCGCAGAACAGCACGGACGGGCTCCGCAGGCTAGCGCACCTGAGTAACAACTGGGCGGGCAGCCGGCCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS GCA 90 bp ATAAACGGGCGCAGAGGCCGGCTGCCCGCCCAGTTGTTACTCAGGTaGGCTAGCCTGCGGAGCCCGTCCGTGCTGTTCTGCGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: INGRRGRLPAQLLLR*ASLRSPSVLFCGKA
Trigger: GGCCTTGCCGCAGAACAGCACGGACGGGCTCCGCAGGCTAGCGCACCTGAGTAACAACTGGGCGGGCAGCCGGCCTCTGCGCCCGTTTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 90 bp AGGACGCAGAGCCGACGGAGCTCTCGGGCTCTGGCGAAAGGGGGTTaGGAAGCGGACTCCGGCGAAGAGCAGTCAGGAACGGCTGGACGG +
Preference number: 5 (lower is better)
Translates to: RTQSRRSSRALAKGG*EADSGEEQSGTAGR
Trigger: CCGTCCAGCCGTTCCTGACTGCTCTTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGAGCCCGAGAGCTCCGTCGGCTCTGCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586689.5
ENST00000587661.5
ENST00000588460.5
ENST00000590393.1
ENST00000593181.5
CDS CCA 90 bp ACTGACAATCCGCCAGGACGCAGAGCCGACGGAGCTCTCGGGCTCTaGCGAAAGGGGGTTGGGAAGCGGACTCCGGCGAAGAGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: TDNPPGRRADGALGL*RKGVGKRTPAKSSQ
Trigger: CTGACTGCTCTTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGAGCCCGAGAGCTCCGTCGGCTCTGCGTCCTGGCGGATTGTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336509.8
CDS GCA 90 bp AGGGAAGCAGGCCCTCCCCCAGTGAAGCCTGGAACACACCTTCACTaGAGCCTGCAGAGACATGGACTGCAGCCTGGAGAGACGCTCAGG +
Preference number: 5 (lower is better)
Translates to: REAGPPPVKPGTHLH*SLQRHGLQPGETLR
Trigger: CCTGAGCGTCTCTCCAGGCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTCCAGGCTTCACTGGGGGAGGGCCTGCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS CCA 90 bp ACGAAGCGGGGCGCGGTGGGCCAATCAGAAGGTTTCATTTCCGGGTaGCGCGGGCGCCATTTTGTGAGGAGCGATATAAACGGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: TKRGAVGQSEGFISG*RGRHFVRSDINGRR
Trigger: TCTGCGCCCGTTTATATCGCTCCTCACAAAATGGCGCCCGCGCCACCCGGAAATGAAACCTTCTGATTGGCCCACCGCGCCCCGCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 90 bp GGCAGATGCAGGAGCCAGGCAGCCAAGCTGTCAACTTCCAGTTCCTaGATCGGAACCCCAGGTTTAGGGCGAAGTTCTCCCCACCGGCAG +
Preference number: 5 (lower is better)
Translates to: GRCRSQAAKLSTSSS*IGTPGLGRSSPHRQ
Trigger: CTGCCGGTGGGGAGAACTTCGCCCTAAACCTGGGGTTCCGATCCAGGAACTGGAAGTTGACAGCTTGGCTGCCTGGCTCCTGCATCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588460.5
ENST00000590393.1
CDS CCA 90 bp TGGAACACACCTTCACTGCAGCCTGCAGAGACATGGACTGCAGCCTaGAGAGACGCTCAGGACTCAGCTCAGCCATGCGCAGATTCCCGA +
Preference number: 5 (lower is better)
Translates to: WNTPSLQPAETWTAA*RDAQDSAQPCADSR
Trigger: TCGGGAATCTGCGCATGGCTGAGCTGAGTCCTGAGCGTCTCTCCAGGCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGATTCCGGGGACATTTaGGCTCAGCTCTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGDSGDI*AQLCRR
Trigger: CCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAATC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTGTGACTCCGCGCTTTTaGGCCCGCCCGCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFVTPRF*ARPPGC
Trigger: ACAGCCCGGCGGGCGGGCCAAAAAGCGCGGAGTCAC...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTTTAACCCCGCTGTGCTaGCTCGTCCCGCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPALTPLC*LVPPAA
Trigger: GGCTGCGGGCGGGACGAGCAAGCACAGCGGGGTTAA...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS-3UTR CAA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCTGGCGAAAGGGGGTaGGGAAGCGGACTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVSGERG*GSGLRR
Trigger: TCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PPSSVSSCVSEVIRVPSRKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...CCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCCCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTTAACCCCGCTGTGCTaGCTCGTCCCGCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSLTPLC*LVPPAA
Trigger: GGCTGCGGGCGGGACGAGCAAGCACAGCGGGGTTAA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS TCA 90 bp TCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTCACGGACACCAGATCAGATACTTCG +
Preference number: 5 (lower is better)
Translates to: SKATSSTKLCVQLCF*GHTCPLTDTRSDTS
Trigger: CGAAGTATCTGATCTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCTTGTGACCTTACTGCGGCTTTTGTCTaGCTCTCGTTCTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TAAFVLLSFSPAVLACDLTAAFV*LSFSPA
Trigger: AGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGT...AAGGTCACAAGCAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS TCA 90 bp GCTCAGCCATGCGCAGATTCCCGACCCACAGAAACTGAACAAACTTaGAGATGGCAAATGCTGGGGCGCTGTCTTCAGAATACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: AQPCADSRPTETEQT*RWQMLGRCLQNTES
Trigger: GCTTTCTGTATTCTGAAGACAGCGCCCCAGCATTTGCCATCTTCAAGTTTGTTCAGTTTCTGTGGGTCGGGAATCTGCGCATGGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CAA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCATCTGGCGAAAGGGGGTaGGGAAGCGGACTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: VILQHIWGMTYASHYYMASGERG*GSGLRR
Trigger: TCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGA...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336509.8
ENST00000355954.7
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTCTGGCGAAAGGGGGTaGGGAAGCGGACTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHSGERG*GSGLRR
Trigger: TCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGA...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000588460.5
ENST00000593181.5
CDS-3UTR CAA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp AGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTCCAGCTGTCCTTGCCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SYERLRLLSCSRSLQLSLPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...CAAGGACAGCTGGAGAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CAA 90 bp CAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCCCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QIVLGRLVDFHVLVIRRLPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...GAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR CAA 90 bp TCTCTCCAGCTGTCCTTGCTTGTGACCTTTGATGGAGACAGCTGCCATGTCGTATCTCTCCAGCTGTCCTaGCTTGTGACCTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: SLQLSLLVTFDGDSCHVVSLQLS*LVTFDG
Trigger: TCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGA...TACGACATGGCAGCTGTCTCCATCAAAGGTCACAAGCAAGGACAGCTGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS TCA 90 bp CCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAATTaGTTGTCAGGCAGTTTCCTTGTGCTGTCCAAAGCACAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRKSHCFSQCCAHPN*LSGSFLVLSKAQQQ
Trigger: CTGCTGCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACAATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588031.5
ENST00000588460.5
ENST00000588670.5
ENST00000588768.5
ENST00000590514.5
ENST00000621483.4
CDS CCA 90 bp GGGGCGCTGTCTTCAGAATACAGAAAGCCCAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCTCCAAGGCCCAACAGAAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: GALSSEYRKPKILSS*VLKQLSPRPNRKLQ
Trigger: CTGCAGTTTTCTGTTGGGCCTTGGAGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTTGGGCTTTCTGTATTCTGAAGACAGCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000585692.5
ENST00000585865.1
ENST00000586622.5
ENST00000588460.5
ENST00000590070.1
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS CCA 90 bp ACGATTGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACACATTGCTaGTACAGCCACTCTGGAAAATATCTGGCAGTTCCTCTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: TIVLAQQAEEASTHC*YSHSGKYLAVPLKS
Trigger: ACTCTTGAGAGGAACTGCCAGATATTTTCCAGAGTGGCTGTACCAGCAATGTGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS-3UTR CAA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACTGTCCCCACAAGGCTAATCACCGTTAGGGCAATAAACACTGTTCTTCGGTCATGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: TVPTRLITVRAINTVLRSCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...TGACCGAAGAACAGTGTTTATTGCCCTAACGGTGATTAGCCTTGTGGGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588031.5
ENST00000588670.5
CDS-3UTR CAA 90 bp CAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: QIVLGRLVDFHVLVIRRLTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...GAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FFHQALCPAVFLRSYVSPKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...AGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGAAAAAGGGGCGTGAACTaGGAGTATTGGCATGAAAAA +
Preference number: 5 (lower is better)
Translates to: HQALCPAVFLRSYVSPHGKRGVN*EYWHEK
Trigger: TTTTTCATGCCAATACTCCAAGTTCACGCCCCTTTT...TCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTTTATCCGCTCCAGGTaGAGGGGCCCACGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSFIRSR*RGPRRG
Trigger: TCCCCTTCGTGGGCCCCTCAACCTGGAGCGGATAAA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS-3UTR CAA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTATCCGCTCCAGGTaGAGGGGCCCACGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSFIRSR*RGPRRG
Trigger: TCCCCTTCGTGGGCCCCTCAACCTGGAGCGGATAAA...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS GCA 90 bp GACTGCAGAAGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTCAGGCAGTTTCCTTGTGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: DCRSAQKIPLFLPML*SSELIVRQFPCAVQ
Trigger: TTGGACAGCACAAGGAAACTGCCTGACAATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACTTCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588031.5
ENST00000588460.5
ENST00000588670.5
ENST00000588768.5
ENST00000590514.5
ENST00000621483.4
CDS GCA 90 bp AAAACGATTGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACACATTaGTGGTACAGCCACTCTGGAAAATATCTGGCAGTTCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: KTIVLAQQAEEASTH*WYSHSGKYLAVPLK
Trigger: CTTGAGAGGAACTGCCAGATATTTTCCAGAGTGGCTGTACCAGCAATGTGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS-3UTR CAA 90 bp GCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTCACGGACACCAGCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: ALCPAVFLRSYVSPHGHQHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...CTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCAAAAGGGGCGTGAACTaGGAGTATTGGCATGAAAAA +
Preference number: 5 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPKRGVN*EYWHEK
Trigger: TTTTTCATGCCAATACTCCAAGTTCACGCCCCTTTT...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355954.7
ENST00000588460.5
CDS TCA 90 bp CGCATGGTGGCATCCTGCTCTCAGACTTCCCAGCCTCCAGAACTGTaGGAAATAAGTGTCTGTTGTTTAAGCCACACAGTCTATGGAAAT +
Preference number: 5 (lower is better)
Translates to: RMVASCSQTSQPPEL*EISVCCLSHTVYGN
Trigger: ATTTCCATAGACTGTGTGGCTTAAACAACAGACACTTATTTCTCACAGTTCTGGAGGCTGGGAAGTCTGAGAGCAGGATGCCACCATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588647.1
CDS-3UTR CAA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCTGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCATGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ESGFRMRKNRTVPTRLITFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...GGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp ATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: IVKIKGDFFHQALCPAVFTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...AAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGAAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CQIVLGRLVDFHVLVIRRKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...TCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp CATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGCCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: HHPIYSEDQRRLLPPSSVPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...CACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTTCCGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: PGHQKTHLLLGHFQNLVSAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...GGAAACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp ATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTGTCAGGCAGTTTCCTaGTGCTGTCCAAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: MSWSSEDSSSPRTFSESGCQAVS*CCPKHS
Trigger: GCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACA...ACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp GGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GFRMRKNRTVPTRLITVRLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...CCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp CTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCCCTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: LLPPSSVSSCVSEVIRVPYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...GGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCATTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LTSMSWSSEDSSSPRTFSFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...TGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NITQYIVKIKGDFFHQALFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPATAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TGCAACAGTGATGAAGTTATGAGAGACTGCGGCTTTTGTCTTGCTCTCGTTCTCTTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CNSDEVMRDCGFCLALVLFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...GAGAACGAGAGCAAGACAAAAGCCGCAGTCTCTCATAACTTCATCACTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS-3UTR CAA 90 bp TATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: YIVKIKGDFFHQALCPAVFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...CACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTTGTCAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: FVRLFWADSLTSMSWSSEFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...TTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588768.5
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATGATTCCGGGGACATTTaGGCTCAGCTCTGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYDSGDI*AQLCRR
Trigger: CCTCCGGCAGAGCTGAGCCAAAATGTCCCCGGAATC...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTGTCCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: RLLPPSSVSSCVSEVIRVHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...GACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTGACTTCCATGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: LTSMSWSSEDSSSPRTFSAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...TGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACATGGAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TGTCCTGGTCATCAGAAGACTCATCTTCTCCTAGGACATTTTCAGAATCTGGTTGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: CPGHQKTHLLLGHFQNLVAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...AACCAGATTCTGAAAATGTCCTAGGAGAAGATGAGTCTTCTGATGACCAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: ESGFRMRKNRTVPTRLITGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...GGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAAGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: WPSILNQGRIFQQEQEREGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCACTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: ESGFRMRKNRTVPTRLITLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...GGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp AGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTGAGGTCATACGTTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: RRLLPPSSVSSCVSEVIRYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...ACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GTCATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCATTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VILQHIWGMTYASHYYMAFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...TGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAGATTGTTCTGGGCAGACTCGTTGACTTCCATGTCCTGGTCATCAGAAGACTCCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: QIVLGRLVDFHVLVIRRLHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...GAGTCTTCTGATGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAACAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp GACTTTTTAAAAGCATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTCGTTGGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: DFLKASTAFVRLFWADSLGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LNITQYIVKIKGDFFHQALCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTTTTAAAAGCATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTCGTTGACTACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: FLKASTAFVRLFWADSLTTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...AGTCAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAAACGATTGTTCTaGCTCAGCAGGCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPPKRLF*LSRPKR
Trigger: CCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTTTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LNITQYIVKIKGDFFHQAFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...AGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTTTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSFLPKR*FLLSRP
Trigger: CGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAA...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAACACCATGACCAGGAGTaGCCAGTGAAGGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKHHDQE*PVKEKV
Trigger: TACCTTCTCCTTCACTGGCAACTCCTGGTCATGGTG...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAGCTCCTGATGACAGTTaGCGCCACATTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKAPDDS*RHISTS
Trigger: ACTTGTGGAAATGTGGCGCAAACTGTCATCAGGAGC...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTTTCAGAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTACTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSESGFRMRKNRTVPTRLLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...TAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCAACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACATTTTCAGAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TFSESGFRMRKNRTVPTRKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...CCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTCTGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGGCAAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: FRMRKNRTVPTRLITVRARRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...TGCCCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS TCA 90 bp AGGAGGGAGGACAGATTCCAACTCACCGCCACATTTCCACAAGTTTaGAAGGCAGTGAACATAAACATAAAGGCAACTCCTAAAATAATG +
Preference number: 5 (lower is better)
Translates to: RREDRFQLTATFPQV*KAVNINIKATPKIM
Trigger: CATTATTTTAGGAGTTGCCTTTATGTTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTGGCGGTGAGTTGGAATCTGTCCTCCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590393.1
ENST00000591864.1
CDS-3UTR CAA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCTAATCACCGTTAGGTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: GFRMRKNRTVPTRLITVRYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...CCTAACGGTGATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588031.5
CDS-3UTR CAA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGTTCTGGGCAGACTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: QLTEQLSLILLALNNSYLFWADS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAGTCTGCCCAGAA...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CATTCTCCAACACATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HSPTHMGNDICFPLLHGKKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...TTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATATGTGTTGGAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp GCAGTTGTAATACTAAGAAGGAGCATCTCCTTGGTGACACATAACTTAAAAGACAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AVVILRRSISLVTHNLKDKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...GTCTTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCTTAGTATTACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp ACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: TQYIVKIKGDFFHQALCPRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...TGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPARRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TCTTCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAAACCCAGTGTTCGTaGACTTCCATGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SSAPNLFVAPIQVPYTPEKTQCS*TSMSWS
Trigger: TGACCAGGACATGGAAGTCAACGAACACTGGGTTTT...CTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR CAA 90 bp TTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGAACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGATG +
Preference number: 5 (lower is better)
Translates to: FVAPIQVPYTPEKKVNSRTAFVR*FWADSM
Trigger: CATCGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...TCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAGGCAAACATAGAGAGTaGAGGTCCTACAATGGCAAC +
Preference number: 5 (lower is better)
Translates to: CSKFICSTNTGSIYTREEGKHRE*RSYNGN
Trigger: GTTGCCATTGTAGGACCTCAACTCTCTATGTTTGCC...TTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAACTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CSKFICSTNTGSIYTREELCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...TTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGACTGCCTTTGTCAGATaGTTCTGGGCAGACTCGTTG +
Preference number: 5 (lower is better)
Translates to: QLTEQLSLILLALNNSYLTAFVR*FWADSL
Trigger: CAACGAGTCTGCCCAGAACAATCTGACAAAGGCAGT...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: TEHHPIYSEDQRRLLPPSRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...GCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TGGCCTAGTATTCTAAATCAAGGCAGGATCTTCCAACAAGAGCAGGAGAGAGAATTTGAACAATTACAGTaGACAGAACAGCTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: WPSILNQGRIFQQEQEREFEQLQ*TEQLSL
Trigger: AAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAAA...TTCTCTCTCCTGCTCTTGTTGGAAGATCCTGCCTTGATTTAGAATACTAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTGTCCAGCTTTTGAACAATTACAGTaGACAGAACAGCTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: QYIVKIKGDFFHQALCPAFEQLQ*TEQLSL
Trigger: AAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAAA...AGCTGGACACAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS TCA 90 bp TTTGGGAGTAATACTGAAGAGAGGGGTCTGCAGAAAGGATGTGTATaGAGCTTAGATAATAATGGCTGTTTCGTAAACTGTTTGAGACCT +
Preference number: 5 (lower is better)
Translates to: FGSNTEERGLQKGCV*SLDNNGCFVNCLRP
Trigger: AGGTCTCAAACAGTTTACGAAACAGCCATTATTATCTAAGCTTCATACACATCCTTTCTGCAGACCCCTCTCTTCAGTATTACTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586622.5
CDS-3UTR CAA 90 bp GAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: EHHPIYSEDQRRLLPPSSHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...AGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: QLTEQLSLILLALNNSYLLCSSE*IVRQFP
Trigger: AGGAAACTGCCTGACAATCAATTCGGATGAGCACAG...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp AACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCAAGCTCTGTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: NITQYIVKIKGDFFHQALYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...CAGAGCTTGGTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGAAGCATCTACTGCCTTaGTCAGATTGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QLTEQLSLILLALNNSYLKHLLP*SDCSGQ
Trigger: CTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTT...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ACATTTTCAGAATCTGGTTTCCGAATGAGAAAGAATAGAACTGTCCCCACAAGGCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: TFSESGFRMRKNRTVPTRHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...CCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAAACCAGATTCTGAAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588031.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp GTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGACCTTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: VAPIQVPYTPEKKVNSRPYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...AGGTCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TCTTCTGCTCCAAATTTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: SSAPNLFVAPIQVPYTPERRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...CTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAAATTTGGAGCAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp TCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACTTTGAACAATTACAGTaGACAGAACAGCTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SILNITQYIVKIKGDFFHFEQLQ*TEQLSL
Trigger: AAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAAA...GTGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTCCATACTGAACATCACCCAATATATAGTGAAGATCAAAGGCGACTTCTTCCACACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: FHTEHHPIYSEDQRRLLPHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...TGGAAGAAGTCGCCTTTGATCTTCACTATATATTGGGTGATGTTCAGTATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCAGAAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: FVAPIQVPYTPEKKVNSRRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...TCTGGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585584.5
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATAGAAGGAGCATCTCCTaGGTGACACATAACTTAAAA +
Preference number: 5 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYRRSIS*VTHNLK
Trigger: TTTTAAGTTATGTGTCACCAAGGAGATGCTCCTTCT...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS-3UTR CAA 90 bp TTATTTGTAGCACCAATACAGGTTCCATATACACCAGAGAAGAAAGTTAATTCCCACATTTCCACAAGTTaGAAAGGCAGTGAACATAAA +
Preference number: 5 (lower is better)
Translates to: LFVAPIQVPYTPEKKVNSHISTS*KGSEHK
Trigger: TTTATGTTCACTGCCTTTCAAACTTGTGGAAATGTG...GGAATTAACTTTCTTCTCTGGTGTATATGGAACCTGTATTGGTGCTACAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588670.5
ENST00000588768.5
CDS-3UTR CAA 90 bp CAGTTGACAGAACAGCTTTCCCTTATTCTACTTGCTTTAAATAACTCATATCTGTATCTGAGTTTTCCCTaGCCAGGCAAAATATATGTA +
Preference number: 5 (lower is better)
Translates to: QLTEQLSLILLALNNSYLYLSFP*PGKIYV
Trigger: TACATATATTTTGCCTGGCAAGGGAAAACTCAGATA...CAGATATGAGTTATTTAAAGCAAGTAGAATAAGGGAAAGCTGTTCTGTCAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000621483.4
CDS-3UTR CAA 90 bp ATATGGGGAATGACATATGCTTCCCATTATTACATGGCAAAACATACTCCATATTTTGAACAATTACAGTaGACAGAACAGCTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: IWGMTYASHYYMAKHTPYFEQLQ*TEQLSL
Trigger: AAGGGAAAGCTGTTCTGTCAACTGTAATTGTTCAAA...ATATGGAGTATGTTTTGCCATGTAATAATGGGAAGCATATGTCATTCCCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000621483.4
CDS CAA 72 bp CCGCTCCCCCTCCCTCCAGCCGTGACTCCGCGCTTTTaGGCCCGCCCGCCGGGCTGTGCGCAGGCGCTTCGG +
Preference number: 6 (lower is better)
Translates to: PLPLPPAVTPRF*ARPPGCAQALR
Trigger: CCGAAGCGCCTGCGCACAGCCCGGCGGGCGGGCCAAAAAGCGCGGAGTCACGGCTGGAGGGAGGGGGAGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588460.5
ENST00000590393.1
CDS CCA 72 bp GTGGGCGGCGCGGGGCGGAGGACCCCGCCTCGCGACTaGGGAAATGGCGTCTGGCGGCGAGATAATGGCGGC +
Preference number: 6 (lower is better)
Translates to: VGGAGRRTPPRD*GNGVWRRDNGG
Trigger: GCCGCCATTATCTCGCCGCCAGACGCCATTTCCCCAGTCGCGAGGCGGGGTCCTCCGCCCCGCGCCGCCCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS CAA 72 bp GGCCGGCCCCGCTGCCTGGAATTAACCCCGCTGTGCTaGCTCGTCCCGCCCGCAGCCCTAGGCGGCGTCGCC +
Preference number: 6 (lower is better)
Translates to: GRPRCLELTPLC*LVPPAALGGVA
Trigger: GGCGACGCCGCCTAGGGCTGCGGGCGGGACGAGCAAGCACAGCGGGGTTAATTCCAGGCAGCGGGGCCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS CCA 72 bp CGGAGGACCCCGCCTCGCGACTGGGGAAATGGCGTCTaGCGGCGAGATAATGGCGGCCTGGGCGGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: RRTPPRDWGNGV*RRDNGGLGGSA
Trigger: CGCGCTCCCGCCCAGGCCGCCATTATCTCGCCGCCAGACGCCATTTCCCCAGTCGCGAGGCGGGGTCCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586622.5
ENST00000588460.5
CDS CCA 72 bp GGGCGCGCGGCAGGGTCGTTACGAAGCGGGGCGCGGTaGGCCAATCAGAAGGTTTCATTTCCGGGTGGCGCG +
Preference number: 6 (lower is better)
Translates to: GRAAGSLRSGAR*ANQKVSFPGGA
Trigger: CGCGCCACCCGGAAATGAAACCTTCTGATTGGCCCACCGCGCCCCGCTTCGTAACGACCCTGCCGCGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CAA 90 bp CAGGACGCAGAGCCGACGGAGCTCTCGGGCTCTGGCGAAAGGGGGTaGGGAAGCGGACTCCGGCGAAGAGCAGTCAGGAACGGCTGGACG +
Preference number: 6 (lower is better)
Translates to: QDAEPTELSGSGERG*GSGLRRRAVRNGWT
Trigger: CGTCCAGCCGTTCCTGACTGCTCTTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGAGCCCGAGAGCTCCGTCGGCTCTGCGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586689.5
ENST00000587661.5
ENST00000588460.5
ENST00000590393.1
ENST00000593181.5
CDS GCA 72 bp AGGTGCGCTAGCCTGCGGAGCCCGTCCGTGCTGTTCTaGGGCAAGGCCTTTCCCAGTGTCCCCACGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RCASLRSPSVLF*GKAFPSVPTRK
Trigger: CTTCCGCGTGGGGACACTGGGAAAGGCCTTGCCGCAGAACAGCACGGACGGGCTCCGCAGGCTAGCGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 72 bp GGAAGCGGACTCCGGCGAAGAGCAGTCAGGAACGGCTaGACGGGGCCGAGAGACGACGCAGCGGAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: GSGLRRRAVRNG*TGPRDDAAESE
Trigger: CTCAGACTCCGCTGCGTCGTCTCTCGGCCCCGTCCAGCCGTTCCTGACTGCTCTTCGCCGGAGTCCGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586689.5
ENST00000587661.5
ENST00000588460.5
ENST00000590393.1
ENST00000593181.5
CDS CCA 72 bp AGCCGACGGAGCTCTCGGGCTCTGGCGAAAGGGGGTTaGGAAGCGGACTCCGGCGAAGAGCAGTCAGGAACG +
Preference number: 6 (lower is better)
Translates to: SRRSSRALAKGG*EADSGEEQSGT
Trigger: CGTTCCTGACTGCTCTTCGCCGGAGTCCGCTTCCCAACCCCCTTTCGCCAGAGCCCGAGAGCTCCGTCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586689.5
ENST00000587661.5
ENST00000588460.5
ENST00000590393.1
ENST00000593181.5
CDS CAA 90 bp GTGAGGAGCGATATAAACGGGCGCAGAGGCCGGCTGCCCGCCCAGTaGTTACTCAGGTGCGCTAGCCTGCGGAGCCCGTCCGTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: VRSDINGRRGRLPAQ*LLRCASLRSPSVLF
Trigger: GAACAGCACGGACGGGCTCCGCAGGCTAGCGCACCTGAGTAACAACTGGGCGGGCAGCCGGCCTCTGCGCCCGTTTATATCGCTCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 72 bp CCTTCACTGCAGCCTGCAGAGACATGGACTGCAGCCTaGAGAGACGCTCAGGACTCAGCTCAGCCATGCGCA +
Preference number: 6 (lower is better)
Translates to: PSLQPAETWTAA*RDAQDSAQPCA
Trigger: TGCGCATGGCTGAGCTGAGTCCTGAGCGTCTCTCCAGGCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS CCA 72 bp AGTGAGCAGGGAAGCAGGCCCTCCCCCAGTGAAGCCTaGAACACACCTTCACTGCAGCCTGCAGAGACATGG +
Preference number: 6 (lower is better)
Translates to: SEQGSRPSPSEA*NTPSLQPAETW
Trigger: CCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTCCAGGCTTCACTGGGGGAGGGCCTGCTTCCCTGCTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS GCA 72 bp GAACACACCTTCACTGCAGCCTGCAGAGACATGGACTaGAGCCTGGAGAGACGCTCAGGACTCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: EHTFTAACRDMD*SLERRSGLSSA
Trigger: GGCTGAGCTGAGTCCTGAGCGTCTCTCCAGGCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS CCA 72 bp GCCTGGAACACACCTTCACTGCAGCCTGCAGAGACATaGACTGCAGCCTGGAGAGACGCTCAGGACTCAGCT +
Preference number: 6 (lower is better)
Translates to: AWNTPSLQPAET*TAAWRDAQDSA
Trigger: AGCTGAGTCCTGAGCGTCTCTCCAGGCTGCAGTCCATGTCTCTGCAGGCTGCAGTGAAGGTGTGTTCCAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS CCA 72 bp CTACAACCAGGAACAGCCCACACCACAAGCTGCGCATaGTGGCATCCTGCTCTCAGACTTCCCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LQPGTAHTTSCA*WHPALRLPSLQ
Trigger: CTGGAGGCTGGGAAGTCTGAGAGCAGGATGCCACCATGCGCAGCTTGTGGTGTGGGCTGTTCCTGGTTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588647.1
CDS CCA 72 bp GGCGCGGTGGGCCAATCAGAAGGTTTCATTTCCGGGTaGCGCGGGCGCCATTTTGTGAGGAGCGATATAAAC +
Preference number: 6 (lower is better)
Translates to: GAVGQSEGFISG*RGRHFVRSDIN
Trigger: GTTTATATCGCTCCTCACAAAATGGCGCCCGCGCCACCCGGAAATGAAACCTTCTGATTGGCCCACCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588460.5
CDS CCA 72 bp AGGAGCCAGGCAGCCAAGCTGTCAACTTCCAGTTCCTaGATCGGAACCCCAGGTTTAGGGCGAAGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: RSQAAKLSTSSS*IGTPGLGRSSP
Trigger: GGGAGAACTTCGCCCTAAACCTGGGGTTCCGATCCAGGAACTGGAAGTTGACAGCTTGGCTGCCTGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588460.5
ENST00000590393.1
CDS CAA 72 bp GAAAGAACCCAGGCGGAGGCCAGCAGCCCCCATGGATaGAAGAGACGGGGATGTGACTCTAGGGATATCAGG +
Preference number: 6 (lower is better)
Translates to: ERTQAEASSPHG*KRRGCDSRDIR
Trigger: CCTGATATCCCTAGAGTCACATCCCCGTCTCTTCAATCCATGGGGGCTGCTGGCCTCCGCCTGGGTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS GCA 72 bp GCAGCCTGGAGAGACGCTCAGGACTCAGCTCAGCCATaGGCAGATTCCCGACCCACAGAAACTGAACAAACT +
Preference number: 6 (lower is better)
Translates to: AAWRDAQDSAQP*ADSRPTETEQT
Trigger: AGTTTGTTCAGTTTCTGTGGGTCGGGAATCTGCGCATGGCTGAGCTGAGTCCTGAGCGTCTCTCCAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS TCA 72 bp AGCTCAGCCATGCGCAGATTCCCGACCCACAGAAACTaGACAAACTTGAAGATGGCAAATGCTGGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: SSAMRRFPTHRN*TNLKMANAGAL
Trigger: CAGCGCCCCAGCATTTGCCATCTTCAAGTTTGTTCAGTTTCTGTGGGTCGGGAATCTGCGCATGGCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585865.1
CDS TCA 72 bp ACTTCTTCCACCAAGCTCTGTGTCCAGCTGTGTTTCTaGGGTCATACGTGTCCCCTCACGGACACCAGATCA +
Preference number: 6 (lower is better)
Translates to: TSSTKLCVQLCF*GHTCPLTDTRS
Trigger: TGATCTGGTGTCCGTGAGGGGACACGTATGACCTCAGAAACACAGCTGGACACAGAGCTTGGTGGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000586622.5
ENST00000588460.5
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS CCA 72 bp CTTGCTCAGCAGGCCGAAGAGGCTTCCACACATTGCTaGTACAGCCACTCTGGAAAATATCTGGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: LAQQAEEASTHC*YSHSGKYLAVP
Trigger: AGGAACTGCCAGATATTTTCCAGAGTGGCTGTACCAGCAATGTGTGGAAGCCTCTTCGGCCTGCTGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS CAA 90 bp TGCACCAGGATGCCCAACAGCACAACTGGATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACACATTGCTGGT +
Preference number: 6 (lower is better)
Translates to: CTRMPNSTTGFLPKR*FLLSRPKRLPHIAG
Trigger: ACCAGCAATGTGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGCATCCTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS CCA 72 bp CCACACATTGCTGGTACAGCCACTCTGGAAAATATCTaGCAGTTCCTCTCAAGAGTAGGCAGCAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: PHIAGTATLENI*QFLSRVGSRGR
Trigger: TCTCCCTCTGCTGCCTACTCTTGAGAGGAACTGCCAGATATTTTCCAGAGTGGCTGTACCAGCAATGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS CAA 90 bp GCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCTTGTGCTGTCCAAAGCACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: AQKIPLFLPMLCSSE*IVRQFPCAVQSTAA
Trigger: TGCTGCTGTGCTTTGGACAGCACAAGGAAACTGCCTGACAATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588031.5
ENST00000588460.5
ENST00000588670.5
ENST00000588768.5
ENST00000590514.5
ENST00000621483.4
CDS CAA 72 bp ATGCCCAACAGCACAACTGGATTTCTACCAAAACGATaGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: MPNSTTGFLPKR*FLLSRPKRLPH
Trigger: GTGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTGGTAGAAATCCAGTTGTGCTGTTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS CAA 90 bp CAAAACGATTGTTCTTGCTCAGCAGGCCGAAGAGGCTTCCACACATaGCTGGTACAGCCACTCTGGAAAATATCTGGCAGTTCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: QNDCSCSAGRRGFHT*LVQPLWKISGSSSQ
Trigger: TTGAGAGGAACTGCCAGATATTTTCCAGAGTGGCTGTACCAGCAATGTGTGGAAGCCTCTTCGGCCTGCTGAGCAAGAACAATCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590070.1
CDS TCA 72 bp GCATCCTGCTCTCAGACTTCCCAGCCTCCAGAACTGTaGGAAATAAGTGTCTGTTGTTTAAGCCACACAGTC +
Preference number: 6 (lower is better)
Translates to: ASCSQTSQPPEL*EISVCCLSHTV
Trigger: GACTGTGTGGCTTAAACAACAGACACTTATTTCTCACAGTTCTGGAGGCTGGGAAGTCTGAGAGCAGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588647.1
CDS CAA 72 bp ATCCCACTGTTTCTCCCAATGCTGTGCTCATCCGAATaGATTGTCAGGCAGTTTCCTTGTGCTGTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: IPLFLPMLCSSE*IVRQFPCAVQS
Trigger: GCTTTGGACAGCACAAGGAAACTGCCTGACAATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588031.5
ENST00000588460.5
ENST00000588670.5
ENST00000588768.5
ENST00000590514.5
ENST00000621483.4
CDS GCA 72 bp AGTGCCCAGAAAATCCCACTGTTTCTCCCAATGCTGTaGTCATCCGAATTGATTGTCAGGCAGTTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: SAQKIPLFLPML*SSELIVRQFPC
Trigger: ACAAGGAAACTGCCTGACAATCAATTCGGATGAGCACAGCATTGGGAGAAACAGTGGGATTTTCTGGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336509.8
ENST00000586622.5
ENST00000588031.5
ENST00000588460.5
ENST00000588670.5
ENST00000588768.5
ENST00000590514.5
ENST00000621483.4
CDS CCA 72 bp TCTTCAGAATACAGAAAGCCCAAGATACTAAGCAGCTaGGTATTAAAGCAGCTGTCTCCAAGGCCCAACAGA +
Preference number: 6 (lower is better)
Translates to: SSEYRKPKILSS*VLKQLSPRPNR
Trigger: TCTGTTGGGCCTTGGAGACAGCTGCTTTAATACCCAGCTGCTTAGTATCTTGGGCTTTCTGTATTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336509.8
ENST00000355954.7
ENST00000585692.5
ENST00000585865.1
ENST00000586622.5
ENST00000588460.5
ENST00000590070.1
ENST00000590514.5
ENST00000593181.5
ENST00000621483.4
CDS CCA 72 bp TTTTTAAAAGCATCTACTGCCTTTGTCAGATTGTTCTaGGCAGACTCGATGCAGGGTTGCCACAAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: FLKASTAFVRLF*ADSMQGCHKPS
Trigger: TGAAGGCTTGTGGCAACCCTGCATCGAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATGCTTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585584.5
CDS CAA 72 bp CATCTACTGCCTTTGTCAGATTGTTCTGGGCAGACTTaGCTATTTTCTTACACGTGCATTGTCTACCACCCC +
Preference number: 6 (lower is better)
Translates to: HLLPLSDCSGQT*LFSYTCIVYHP
Trigger: GGGGTGGTAGACAATGCACGTGTAAGAAAATAGCAAAGTCTGCCCAGAACAATCTGACAAAGGCAGTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585958.5
CDS TCA 72 bp AATACTGAAGAGAGGGGTCTGCAGAAAGGATGTGTATaGAGCTTAGATAATAATGGCTGTTTCGTAAACTGT +
Preference number: 6 (lower is better)
Translates to: NTEERGLQKGCV*SLDNNGCFVNC
Trigger: ACAGTTTACGAAACAGCCATTATTATCTAAGCTTCATACACATCCTTTCTGCAGACCCCTCTCTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586622.5