RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFNG (Homo sapiens)

Ensembl gene IDs: ENSG00000100060

Ensembl transcript IDs: ENST00000356998.8, ENST00000416983.7, ENST00000424765.2, ENST00000430411.1, ENST00000436341.5, ENST00000438891.5, ENST00000442496.1, ENST00000454291.1, ENST00000466943.1

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCATGGATaGGCCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCA +
Preference number: 1 (lower is better)
Translates to: VPASCGCGAVALRHG*AGSGWAFPHRRRGP
Trigger: TGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
3UTR CCA 90 bp CCCAGGGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCA +
Preference number: 1 (lower is better)
Translates to: PRGLGCLQCQLPLRS*ACQPPEGPARDCLS
Trigger: TGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp CAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGACACTTaGCAGGGACCCACAGTGCCACCTTGGGAGCCAAGGCACACCCAG +
Preference number: 1 (lower is better)
Translates to: QPPEGPARDCLSQDT*QGPTVPPWEPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp CTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTaGCTATCACAAGACACTTGCCAGGGACCCACAGTGCCACCTTGG +
Preference number: 1 (lower is better)
Translates to: LRSWACQPPEGPARD*LSQDTCQGPTVPPW
Trigger: CCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp GGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTaGCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGAC +
Preference number: 1 (lower is better)
Translates to: GLGCLQCQLPLRSWA*QPPEGPARDCLSQD
Trigger: GTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp TGTCTAACTCACCTCCCAGGGGCCTGGGGTGCCTTCAGTGCCAATTaGCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: CLTHLPGAWGAFSAN*HSDPGLANHPKALP
Trigger: TGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGGAGGTGAGTTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR TCA 90 bp AAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTTCAGGCTGGGCCTTCCCACATAGAC +
Preference number: 1 (lower is better)
Translates to: KPELYQPRAVVGLWL*GMDGPVQAGPSHID
Trigger: GTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
3UTR GCA 90 bp CTGCCAGGGACTGCCTATCACAAGACACTTGCCAGGGACCCACAGTaGCACCTTGGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAACC +
Preference number: 1 (lower is better)
Translates to: LPGTAYHKTLARDPQ*HLGSQGTPRSLCPT
Trigger: GGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 90 bp GACTGCCTATCACAAGACACTTGCCAGGGACCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAACCTTTGCCCA +
Preference number: 1 (lower is better)
Translates to: DCLSQDTCQGPTVPP*EPRHTQKSLPNLCP
Trigger: TGGGCAAAGGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp GGAGCAAGGAGCTTTGGGAGACTGGTTGGCAACAACAGCAGGTGCTaGAGACCCTGGATTCTGCCATCATTCCACCCATGTCCCTTCAGG +
Preference number: 1 (lower is better)
Translates to: GARSFGRLVGNNSRC*RPWILPSFHPCPFR
Trigger: CCTGAAGGGACATGGGTGGAATGATGGCAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 90 bp TGGGGAGCAAGGAGCTTTGGGAGACTGGTTGGCAACAACAGCAGGTaGTGCAGACCCTGGATTCTGCCATCATTCCACCCATGTCCCTTC +
Preference number: 1 (lower is better)
Translates to: WGARSFGRLVGNNSR*CRPWILPSFHPCPF
Trigger: GAAGGGACATGGGTGGAATGATGGCAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 90 bp AGCTTTGGGAGACTGGTTGGCAACAACAGCAGGTGCTGCAGACCCTaGATTCTGCCATCATTCCACCCATGTCCCTTCAGGAACTCGGGA +
Preference number: 1 (lower is better)
Translates to: SFGRLVGNNSRCCRP*ILPSFHPCPFRNSG
Trigger: TCCCGAGTTCCTGAAGGGACATGGGTGGAATGATGGCAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 90 bp CTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTaGGAAATGAGCAAAAAGGATCATCACAATTGGCTGGGACCCGTT +
Preference number: 1 (lower is better)
Translates to: LARAGPMVAPNSKKG*EMSKKDHHNWLGPV
Trigger: AACGGGTCCCAGCCAATTGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 90 bp AACAGCAAGAAAGGCTGGGAAATGAGCAAAAAGGATCATCACAATTaGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTG +
Preference number: 1 (lower is better)
Translates to: NSKKGWEMSKKDHHN*LGPVMLHHLGPGML
Trigger: CAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAATTGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTCTTGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR TCA 90 bp GGGGCTGGGCTGCAGGCGGCCGCCCAGCTTGCACTCAATGATATAGCCCATGGTGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTT +
Preference number: 2 (lower is better)
Translates to: GAGLQAAAQLALNDIAHGVGLWL*GMDGPV
Trigger: AACCGGCCCATCCATGCCTCAGAGCCACAGCCCCAC...ACCATGGGCTATATCATTGAGTGCAAGCTGGGCGGCCGCCTGCAGCCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438891.5
3UTR-3UTR CCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTCCCCTGGAGCCTCTCTaGCCACCACCTGGTCCACCT +
Preference number: 2 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGPLEPL*PPPGPP
Trigger: AGGTGGACCAGGTGGTGGCCAGAGAGGCTCCAGGGG...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
3UTR CAA 90 bp CCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGACACTaGCCAGGGACCCACAGTGCCACCTTGGGAGCCAAGGCACACCCA +
Preference number: 2 (lower is better)
Translates to: PTTRRPCQGLPITRH*PGTHSATLGAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTACACCTCCCAGGGGCCTaGGGTGCCTTCAGTGCCAAT +
Preference number: 2 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLHLPGA*GAFSAN
Trigger: ATTGGCACTGAAGGCACCCCAGGCCCCTGGGAGGTG...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
3UTR-3UTR GCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACACCCAGGGGCCTGGGGTaGCTTCAGTGCCAATTGCCA +
Preference number: 2 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTPRGLG*LQCQLP
Trigger: TGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGG...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAGGGAGTCTAGCCCCTaGAGCCTCTCTGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTRESSP*SLSGHH
Trigger: GTGGTGGCCAGAGAGGCTCCAGGGGCTAGACTCCCT...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCATCTGGGCCGGTTCAGGCTaGGCCTTCCCACATAGACGT +
Preference number: 2 (lower is better)
Translates to: RMRADVSMKREPLAHGAIWAGSG*AFPHRR
Trigger: ACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCA...GATGGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
3UTR-3UTR CCA 90 bp CGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCATCTGTGGCTCTGAGGCATaGATGGGCCGGTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RMRADVSMKREPLAHGAICGSEA*MGRFRL
Trigger: CAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACA...GATGGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
3UTR CAA 90 bp GGACTGCCTATCACAAGACACTTGCCAGGGACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAACCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GLPITRHLPGTHSAT*GAKAHPEVSAQPLP
Trigger: GGGCAAAGGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTCTATCACAAGACACTTaGCAGGGACCCACAGTGCCA +
Preference number: 2 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGLSQDT*QGPTVP
Trigger: TGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAG...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAACCACCCGAAGGCCCTaGCAGGGACTGCCTATCACA +
Preference number: 2 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKTTRRP*QGLPIT
Trigger: TGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGT...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SVPIATQILGLPTTRRPCTPRSL*PTFAQQ
Trigger: CTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGT...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RSWACQPPEGPARDCLSQTPRSL*PTFAQQ
Trigger: CTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGT...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACCTATCACAAGACACTTaGCAGGGACCCACAGTGCCA +
Preference number: 2 (lower is better)
Translates to: QLPLRSWACQPPEGPARDLSQDT*QGPTVP
Trigger: TGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAG...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAGCCTTCAGTGCCAATTaGCACTCAGATCCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPAFSAN*HSDPGL
Trigger: AAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGC...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACACTGGGGTGCCTTCAGTaGCAATTGCCACTCAGATCC +
Preference number: 2 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTLGCLQ*QLPLRS
Trigger: GGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAG...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp TTCCCTCTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTGGGGCAACAACAGCAGGTaGTGCAGACCCTGGATTCTG +
Preference number: 2 (lower is better)
Translates to: FPLARAGPMVAPNSKKGWGNNSR*CRPWIL
Trigger: CAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCC...CCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAATTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAA +
Preference number: 2 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKLPLRS*ACQPPE
Trigger: TTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAA...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAGGGAGCAAGGAGCTTTaGGAGACTGGTTGGCAACAA +
Preference number: 2 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKGSKEL*ETGWQQ
Trigger: TTGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCC...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAAGCTCAAGTGCCCCCTaGCCTTTTTCAATTCAGCCT +
Preference number: 2 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKSSSAP*PFSIQP
Trigger: AGGCTGAATTGAAAAAGGGCAGGGGGCACTTGAGCT...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGCCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAG +
Preference number: 2 (lower is better)
Translates to: PSPETSLLDLLSSLWPELPTVPP*EPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGG...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR TCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGCCCCAGGGGAATGACTaGGAGACATTAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PSPETSLLDLLSSLWPELPQGND*ETLARA
Trigger: GGCCCTGGCTAATGTCTCTCAGTCATTCCCCTGGGG...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGTCTCTGGCCACCACCTaGTCCACCTGGTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQSLATT*STWSPG
Trigger: CCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCCCCTGGAGCCTCTCTaGCCACCACCTGGTCCACCT +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQPLEPL*PPPGPP
Trigger: AGGTGGACCAGGTGGTGGCCAGAGAGGCTCCAGGGG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAG +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQPTVPP*EPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGGGAGTCTAGCCCCTaGAGCCTCTCTGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQRESSP*SLSGHH
Trigger: GTGGTGGCCAGAGAGGCTCCAGGGGCTAGACTCCCT...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGGGCCCTGCCAGGGACTaGCTATCACAAGACACTTGC +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQGPARD*LSQDTC
Trigger: GCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCC...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGAGCTCAAGTGCCCCCTaGCCTTTTTCAATTCAGCCT +
Preference number: 2 (lower is better)
Translates to: PSPETSLLDLLSSLWPELSSSAP*PFSIQP
Trigger: AGGCTGAATTGAAAAAGGGCAGGGGGCACTTGAGCT...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR GCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGGGCAACAACAGCAGGTaGTGCAGACCCTGGATTCTG +
Preference number: 2 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQGNNSR*CRPWIL
Trigger: CAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCC...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR TCA 72 bp CTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTTCAGGCTGGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: LYQPRAVVGLWL*GMDGPVQAGPS
Trigger: GGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
3UTR CCA 72 bp CTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LGCLQCQLPLRS*ACQPPEGPARD
Trigger: GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCA +
Preference number: 3 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPTHSAT*GAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGT...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCA +
Preference number: 3 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLTHSAT*GAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGT...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAACTCAGATCCTGGGCTaGCCAACCACCCGAAGGCCC +
Preference number: 3 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTTQILG*PTTRRP
Trigger: GGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 72 bp TGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTaGCTATCACAAGACACTTGCCAGGGACCCACAGTG +
Preference number: 3 (lower is better)
Translates to: WACQPPEGPARD*LSQDTCQGPTV
Trigger: CACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCCTATCACAAGACACTaGCCAGGGACCCACAGTGCC +
Preference number: 3 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAPITRH*PGTHSA
Trigger: GGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGG...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAGGGGAGCAAGGAGCTTaGGGAGACTGGTTGGCAACA +
Preference number: 3 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPGEQGA*GDWLAT
Trigger: TGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCCC...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 72 bp TGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTaGCAACCACCCGAAGGCCCTGCCAGGGACTGCCTA +
Preference number: 3 (lower is better)
Translates to: CLQCQLPLRSWA*QPPEGPARDCL
Trigger: TAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 72 bp TCACAAGACACTTGCCAGGGACCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAAC +
Preference number: 3 (lower is better)
Translates to: SQDTCQGPTVPP*EPRHTQKSLPN
Trigger: GTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp TTCCCTCTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTGGCCTATCACAAGACACTaGCCAGGGACCCACAGTGCC +
Preference number: 3 (lower is better)
Translates to: FPLARAGPMVAPNSKKGWPITRH*PGTHSA
Trigger: GGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGG...CCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAGCTTTGGGAGACTGGTaGGCAACAACAGCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTALGDW*ATTAGA
Trigger: AGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGC...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp GCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCAGCTGCAGCAGCGCCCTaGGGTTCACATAGTTGTCAT +
Preference number: 3 (lower is better)
Translates to: ANQNCTSLVRLWGCGSEAAAAAP*GSHSCH
Trigger: ATGACAACTATGTGAACCCAAGGGCGCTGCTGCAGC...TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
3UTR TCA 72 bp GACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTaGGGCTCCAAACAAAATCTGGTCCTGTTCGCAAGG +
Preference number: 3 (lower is better)
Translates to: DPLCSIIWAPAC*GSKQNLVLFAR
Trigger: CCTTGCGAACAGGACCAGATTTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 72 bp AAAGGCTGGGAAATGAGCAAAAAGGATCATCACAATTaGCTGGGACCCGTTATGCTCCATCATCTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: KGWEMSKKDHHN*LGPVMLHHLGP
Trigger: GGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAATTGTGATGATCCTTTTTGCTCATTTCCCAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 72 bp AGTGGGCTGCAAAACCTTCCCCAGAAACATCTCTATTaGATTTGCTTAGTTCCCTCTGGCCAGAGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SGLQNLPQKHLY*ICLVPSGQSWS
Trigger: GGACCAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTGCAGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGTGCCTTCAGTGCCAATaGCCACTCAGATCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQCLQCQ*PLRSWA
Trigger: AGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCA...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR GCA 72 bp CTGCAAAACCTTCCCCAGAAACATCTCTATTGGATTTaGTTAGTTCCCTCTGGCCAGAGCTGGTCCCATGGT +
Preference number: 3 (lower is better)
Translates to: LQNLPQKHLYWI*LVPSGQSWSHG
Trigger: ACCATGGGACCAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CCA 72 bp GCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTaGGAAATGAGCAAAAAGGATCATCACAATTGGCTG +
Preference number: 3 (lower is better)
Translates to: AGPMVAPNSKKG*EMSKKDHHNWL
Trigger: CAGCCAATTGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR-3UTR CAA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGAAAGGATCATCACAATaGGCTGGGACCCGTTATGCT +
Preference number: 3 (lower is better)
Translates to: PSPETSLLDLLSSLWPELKGSSQ*AGTRYA
Trigger: AGCATAACGGGTCCCAGCCAATTGTGATGATCCTTT...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGGGCCCCGGGTTCGGCTaGCTCAGCTCGGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QAGPSHIDVAGQREGSQKGPGFG*LSSGVP
Trigger: AGGGACCCCCGAGCTGAGCCAGCCGAACCCGGGGCC...CTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp CAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCGCGGGAGCCGGCACTaGATTGGTTGGCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QAGPSHIDVAGQREGSQKRGSRH*IGWPWD
Trigger: GTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCG...CTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCGGCCCCGGGTTCGGCTaGCTCAGCTCGGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPGVPSVPIATQILGLPTGPGFG*LSSGVP
Trigger: AGGGACCCCCGAGCTGAGCCAGCCGAACCCGGGGCC...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAGGCCCCGGGTTCGGCTaGCTCAGCTCGGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPGPGFG*LSSGVP
Trigger: AGGGACCCCCGAGCTGAGCCAGCCGAACCCGGGGCC...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGGCCCCGGGTTCGGCTaGCTCAGCTCGGGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QHPQWQTRTVPASCGCGAGPGFG*LSSGVP
Trigger: AGGGACCCCCGAGCTGAGCCAGCCGAACCCGGGGCC...AGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp CCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTGGAAGAGGTAGGAGCTaGGGCTCTGGACCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PVQAGPSHIDVAGQREGSGRGRS*GSGPRG
Trigger: GCCTCTGGGTCCAGAGCCTCAGCTCCTACCTCTTCC...AGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp TTGTGGGGCTGTGGCTCTGAGGCATGGATGGGCCGGTTCAGGCTGGGCCTTCCCCCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LWGCGSEAWMGRFRLGLPPRSSW*PQGGTP
Trigger: TGGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGG...GGGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR CCA 90 bp CAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGGAGCCGGCACTGCATTaGTTGGCCCTGGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: QAGPSHIDVAGQREGSQKEPALH*LALGPQ
Trigger: CTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTC...CTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp GTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGGAGCCGGCACTGCATTaGTTGGCCCTGGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: VQAGPSHIDVAGQREGSQEPALH*LALGPQ
Trigger: CTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTC...CTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTTCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PVQAGPSHIDVAGQREGSSRRKR*KARVVF
Trigger: GAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGA...AGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGGACAGAGCTGGGTaGCTGTGTTCCGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVQAGPSHIDVAGQREGSQDRAG*LCSAEQ
Trigger: CTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG...AGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp TCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SGWAFPHRRRGPAGRLSEVGLWL*GMDGPV
Trigger: AACCGGCCCATCCATGCCTCAGAGCCACAGCCCCAC...TTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCCGCGGGAGCCGGCACTaGATTGGTTGGCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIRGSRH*IGWPWD
Trigger: GTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCG...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCGCGGGAGCCGGCACTaGATTGGTTGGCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPARGSRH*IGWPWD
Trigger: GTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCG...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAGCGGCACTGCATTGGTTaGCCCTGGGACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GPSHIDVAGQREGSQKLQRHCIG*PWDPRQ
Trigger: CTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCG...CTGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp TGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAGCTCTGAGGCATGGATaGGCCGGTTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WAFPHRRRGPAGRLSEAAALRHG*AGSGWA
Trigger: GGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGC...TGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp GTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAGCCTCGTGCGGTTGTaGGGCTGTGGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VQAGPSHIDVAGQREGSQSLVRL*GCGSEA
Trigger: TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCT...CTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCGGAGGGAGCGAAATCTaGAGGGGTCCTCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPGGSEI*RGPPPG
Trigger: CCCCGGAGGAGGACCCCTCCAGATTTCGCTCCCTCC...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp GGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAGTCTGGACCCAGAGGCTaGGCCATGGCAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: GPSHIDVAGQREGSQKLQSGPRG*AMAARS
Trigger: AGATCGTGCTGCCATGGCTCAGCCTCTGGGTCCAGA...CTGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGCCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLPRSSW*PQGGTP
Trigger: TGGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGG...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR TCA 90 bp CCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PQWQTRTVPASCGCGAVAVGLWL*GMDGPV
Trigger: AACCGGCCCATCCATGCCTCAGAGCCACAGCCCCAC...AGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp AGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGCCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: STPSGKPELYQPRAVVGLPRSSW*PQGGTL
Trigger: CAGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGG...CAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR GCA 90 bp GCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCACGCGGGAGCCGGCACTaGATTGGTTGGCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ANQNCTSLVRLWGCGSEARGSRH*IGWPWD
Trigger: GTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCG...TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCGCAGTCCTCAGCAGCTaGAGGGTCTCCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPAVLSS*RVSRWE
Trigger: CTCCCACCTGGAGACCCTGCAGCTGCTGAGGACTGC...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCGGCTGGGACCCGTTATaGTCCATCATCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPGWDPL*SIIWAP
Trigger: CGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCC...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAACCAGAGGCTGAGCCATaGCAGCACGATCTCGACCGC +
Preference number: 4 (lower is better)
Translates to: SGWAFPHRRRGPAGRLSEPEAEP*QHDLDR
Trigger: GCGGTCGAGATCGTGCTGCCATGGCTCAGCCTCTGG...TTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTTTGGTGACCACAAGGTaGGACCCCAGTCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVQAGPSHIDVAGQREGSLVTTR*DPSLSW
Trigger: CCAGGAGAGACTGGGGTCCCACCTTGTGGTCACCAA...AGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR CCA 90 bp CAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTTGCAGGACAGAGCTaGGTGGCTGTGTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: QAGPSHIDVAGQREGSQKLAGQS*VAVFRG
Trigger: TCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAG...CTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp TGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGCTCTGAGGCATGGATaGGCCGGTTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CQLPLRSWACQPPEGPARALRHG*AGSGWA
Trigger: GGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGC...CCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAGTGTGGCTCTGAGGCATaGATGGGCCGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPSHIDVAGQREGSQKLQCGSEA*MGRFRL
Trigger: CAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACA...CTGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp GGGGCTGTGGCTCTGAGGCATGGATGGGCCGGTTCAGGCTGGGCCTTCCCACATTGTGGCTCTGAGGCATaGATGGGCCGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAVALRHGWAGSGWAFPHCGSEA*MGRFRL
Trigger: CAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACA...ATGTGGGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTAGCCTCGTGCGGTTGTaGGGCTGTGGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGSLVRL*GCGSEA
Trigger: TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCT...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCAGCCTCGTGCGGTTGTaGGGCTGTGGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPVANQNCTSLVRLWGCGSLVRL*GCGSEA
Trigger: TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCT...GCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTATCTCTGGCCACCACCTaGTCCACCTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLSLATT*STWSPG
Trigger: CCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACCCCCTGGAGCCTCTCTaGCCACCACCTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDPLEPL*PPPGPP
Trigger: AGGTGGACCAGGTGGTGGCCAGAGAGGCTCCAGGGG...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTACCCCTGGAGCCTCTCTaGCCACCACCTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLPLEPL*PPPGPP
Trigger: AGGTGGACCAGGTGGTGGCCAGAGAGGCTCCAGGGG...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR TCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCGGAAGAGGTAGGAGCTaGGGCTCTGGACCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAGRGRS*GSGPRG
Trigger: GCCTCTGGGTCCAGAGCCTCAGCTCCTACCTCTTCC...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTVGLWL*GMDGPV
Trigger: AACCGGCCCATCCATGCCTCAGAGCCACAGCCCCAC...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTGAGCAGATGTGTCCATaGAACGGGAGCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGEQMCP*NGSHWP
Trigger: GGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTC...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCCCCCAGGGGAATGACTaGGAGACATTAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPPQGND*ETLARA
Trigger: GGCCCTGGCTAATGTCTCTCAGTCATTCCCCTGGGG...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TTGTGGGGCTGTGGCTCTGAGGCATGGATGGGCCGGTTCAGGCTGGGCCTTCCCACTCAGCAGCCATCTTaGAGGACAGAGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LWGCGSEAWMGRFRLGLPTQQPS*RTELGG
Trigger: GCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGT...GGGAAGGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACAGCCCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGCAGTCCTCAGCAGCTaGAGGGTCTCCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLAVLSS*RVSRWE
Trigger: CTCCCACCTGGAGACCCTGCAGCTGCTGAGGACTGC...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCACCACCCGAAGGCCCTaGCAGGGACTGCCTATCACA +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPTTRRP*QGLPIT
Trigger: TGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGT...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCCCAGGGGCCTGGGGTaGCTTCAGTGCCAATTGCCA +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAPRGLG*LQCQLP
Trigger: TGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGG...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTACCCAGGGGCCTGGGGTaGCTTCAGTGCCAATTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLPRGLG*LQCQLP
Trigger: TGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGG...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGGGCTGGGACCCGTTATaGTCCATCATCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLGWDPL*SIIWAP
Trigger: CGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCC...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCCAGAGGCTGAGCCATaGCAGCACGATCTCGACCGC +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAPEAEP*QHDLDR
Trigger: GCGGTCGAGATCGTGCTGCCATGGCTCAGCCTCTGG...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTCCAGAGGCTGAGCCATaGCAGCACGATCTCGACCGC +
Preference number: 4 (lower is better)
Translates to: QHPQWQTRTVPASCGCGAPEAEP*QHDLDR
Trigger: GCGGTCGAGATCGTGCTGCCATGGCTCAGCCTCTGG...AGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCGGCACTGCATTGGTTaGCCCTGGGACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPARHCIG*PWDPRQ
Trigger: CTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCG...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTCGGCACTGCATTGGTTaGCCCTGGGACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QHPQWQTRTVPASCGCGARHCIG*PWDPRQ
Trigger: CTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCG...AGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCGAGCCGGCACTGCATTaGTTGGCCCTGGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCEPALH*LALGPQ
Trigger: CTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTC...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCATCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPSRRKR*KARVVF
Trigger: GAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGA...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGCCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCTCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: QPDESRCVHETGATGPRSSRRKR*KARVVF
Trigger: GAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGA...GCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCACAGGACAGAGCTGGGTaGCTGTGTTCCGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPQDRAG*LCSAEQ
Trigger: CTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCCATCGGGCACCCAGCTaGGGACACCAGGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPHRAPS*GHQGVS
Trigger: AGATACACCCTGGTGTCCCCAGCTGGGTGCCCGATG...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCCCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: GPGVPSVPIATQILGLPTPTVPP*EPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGG...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAACCCCTGGAGCCTCTCTaGCCACCACCTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQPLEPL*PPPGPP
Trigger: AGGTGGACCAGGTGGTGGCCAGAGAGGCTCCAGGGG...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCAGGGAGTCTAGCCCCTaGAGCCTCTCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIRESSP*SLSGHH
Trigger: GTGGTGGCCAGAGAGGCTCCAGGGGCTAGACTCCCT...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAAGGGAGTCTAGCCCCTaGAGCCTCTCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPRESSP*SLSGHH
Trigger: GTGGTGGCCAGAGAGGCTCCAGGGGCTAGACTCCCT...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR TCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCATCTGGACCCAGAGGCTaGGCCATGGCAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPSGPRG*AMAARS
Trigger: AGATCGTGCTGCCATGGCTCAGCCTCTGGGTCCAGA...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAATCTGGACCCAGAGGCTaGGCCATGGCAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: WLGPVMLHHLGPGMLRLQSGPRG*AMAARS
Trigger: AGATCGTGCTGCCATGGCTCAGCCTCTGGGTCCAGA...TTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAACCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQPRSSW*PQGGTL
Trigger: CAAGGTCCCACCTTGTGGTCACCAACTGCTCCGCGG...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416983.7
CDS-3UTR GCA 90 bp CCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCATGCAGTCCTCAGCAGCTaGAGGGTCTCCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PDESRCVHETGATGPRSHAVLSS*RVSRWE
Trigger: CTCCCACCTGGAGACCCTGCAGCTGCTGAGGACTGC...ATGGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR GCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTCTGTTCTGGGAGCTGTaGAGTCCTCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGLFWEL*SPQQLQ
Trigger: CTGCAGCTGCTGAGGACTGCACAGCTCCCAGAACAG...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAACCACCCGAAGGCCCTaGCAGGGACTGCCTATCACA +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLTTRRP*QGLPIT
Trigger: TGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGT...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGCTCAGATCCTGGGCTTaGCAACCACCCGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLLRSWA*QPPEGP
Trigger: AGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAG...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTACTCAGATCCTGGGCTTaGCAACCACCCGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLLRSWA*QPPEGP
Trigger: AGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAG...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCCAGGGGCCTGGGGTaGCTTCAGTGCCAATTGCCA +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCPRGLG*LQCQLP
Trigger: TGGCAATTGGCACTGAAGGCACCCCAGGCCCCTGGG...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCGGCACTGCATTGGTTaGCCCTGGGACCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCRHCIG*PWDPRQ
Trigger: CTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCG...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAGAGCCGGCACTGCATTaGTTGGCCCTGGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKEPALH*LALGPQ
Trigger: CTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTC...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCGACCCCAGTCTCTCCTaGAGGCCTTTGTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGKPELYQPRAVVGLWLDPSLS*RPLSGL
Trigger: CAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTC...GAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR CCA 90 bp CGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCATCCAGGACAGAGCTGGGTaGCTGTGTTCCGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RMRADVSMKREPLAHGAIQDRAG*LCSAEQ
Trigger: CTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG...GATGGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CCA 90 bp TGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGCTTGCAGGACAGAGCTaGGTGGCTGTGTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: CQLPLRSWACQPPEGPARLAGQS*VAVFRG
Trigger: TCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAG...CCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGGGCCGGTTCAGGCTaGGCCTTCCCACATAGACGT +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDWAGSG*AFPHRR
Trigger: ACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCA...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCTGGGCCGGTTCAGGCTaGGCCTTCCCACATAGACGT +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIWAGSG*AFPHRR
Trigger: ACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCA...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGGCCGGTTCAGGCTaGGCCTTCCCACATAGACGT +
Preference number: 4 (lower is better)
Translates to: STPSGKPELYQPRAVVGLWAGSG*AFPHRR
Trigger: ACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCA...CAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGTGGCTCTGAGGCATaGATGGGCCGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDCGSEA*MGRFRL
Trigger: CAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACA...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGCATCGGGCACCCAGCTaGGGACACCAGGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLHRAPS*GHQGVS
Trigger: AGATACACCCTGGTGTCCCCAGCTGGGTGCCCGATG...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCPTVPP*EPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGG...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCACCTCCCAGGGGCCTaGGGTGCCTTCAGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCHLPGA*GAFSAN
Trigger: ATTGGCACTGAAGGCACCCCAGGCCCCTGGGAGGTG...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCTCTCTGGCCACCACCTaGTCCACCTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGSLATT*STWSPG
Trigger: CCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTGGGACCCTGTTCCCTaGTCCTGGAAACCCACGTGT +
Preference number: 4 (lower is better)
Translates to: PPVANQNCTSLVRLWGCGWDPVP*SWKPTC
Trigger: ACACGTGGGTTTCCAGGACCAGGGAACAGGGTCCCA...GCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438891.5
3UTR CAA 72 bp CGAAGGCCCTGCCAGGGACTGCCTATCACAAGACACTaGCCAGGGACCCACAGTGCCACCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RRPCQGLPITRH*PGTHSATLGAK
Trigger: CTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCAAGCCAGTTTGCGATTaGTGCAGAAGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PPVANQNCTSLVRLWGCGKPVCD*CRSQHP
Trigger: GGGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTT...GCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCTTCAATTCAGCCTCCTaGGGGAGTCTAGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPFNSAS*GSLAPG
Trigger: TCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAA...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR TCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCTGGGCCCCGGCATGCTaGGGCTCCAAACAAAATCTG +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIWAPAC*GSKQNL
Trigger: CAGATTTTGTTTGGAGCCTCAGCATGCCGGGGCCCA...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCATGGGCCCCGGCATGCTaGGGCTCCAAACAAAATCTG +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPWAPAC*GSKQNL
Trigger: CAGATTTTGTTTGGAGCCTCAGCATGCCGGGGCCCA...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAGTCCCTTGTACCCGCTaGGGGGACAGGTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTVPCTR*GDRFKW
Trigger: CCACTTGAACCTGTCCCCGCAGCGGGTACAAGGGAC...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAACTCAGCAGCCATCTTaGAGGACAGAGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPTQQPS*RTELGG
Trigger: GCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGT...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAACTCAGCAGCCATCTTaGAGGACAGAGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLTQQPS*RTELGG
Trigger: GCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGT...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAAAGGCTCTCAGAAGCTaGAGCAGCGCCCTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLKALRS*SSALGF
Trigger: GAACCCAAGGGCGCTGCTGCAGCTTCTGAGAGCCTT...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CAGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTAAGGCTCTCAGAAGCTaGAGCAGCGCCCTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: QHPQWQTRTVPASCGCGAKALRS*SSALGF
Trigger: GAACCCAAGGGCGCTGCTGCAGCTTCTGAGAGCCTT...AGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp AGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGAAGGCTCTCAGAAGCTaGAGCAGCGCCCTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: STPSGKPELYQPRAVVGLKALRS*SSALGF
Trigger: GAACCCAAGGGCGCTGCTGCAGCTTCTGAGAGCCTT...CAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp TTCCCTCTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTGGGCAGTCCTCAGCAGCTaGAGGGTCTCCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPLARAGPMVAPNSKKGWAVLSS*RVSRWE
Trigger: CTCCCACCTGGAGACCCTGCAGCTGCTGAGGACTGC...CCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp AGCCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCCTGTTCTGGGAGCTGTaGAGTCCTCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRMRADVSMKREPLAHGALFWEL*SPQQLQ
Trigger: CTGCAGCTGCTGAGGACTGCACAGCTCCCAGAACAG...GGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR GCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACTGTTCTGGGAGCTGTaGAGTCCTCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPLFWEL*SPQQLQ
Trigger: CTGCAGCTGCTGAGGACTGCACAGCTCCCAGAACAG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGTPRSL*PTFAQQ
Trigger: CTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGT...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAGGCCCTGCCAGGGACTaGCTATCACAAGACACTTGC +
Preference number: 4 (lower is better)
Translates to: WLGPVMLHHLGPGMLRLQGPARD*LSQDTC
Trigger: GCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCC...TTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCACCACCCGAAGGCCCTaGCAGGGACTGCCTATCACA +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCTTRRP*QGLPIT
Trigger: TGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGT...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTCTGGGGTGCCTTCAGTaGCAATTGCCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGLGCLQ*QLPLRS
Trigger: GGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAG...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCTGCATTGGTTGGCCCTaGGACCCCAGACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCCIGWP*DPRQLS
Trigger: GCTGAGCTGTCTGGGGTCCCAGGGCCAACCAATGCA...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACGGGGACAGGTTCAAGTaGTACCGCAGACACAGGAGC +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDGDRFK*YRRHRS
Trigger: GCTCCTGTGTCTGCGGTACCACTTGAACCTGTCCCC...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TTCCCTCTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTGGTCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: FPLARAGPMVAPNSKKGWSRRKR*KARVVF
Trigger: GAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGA...CCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGACCCCAGTCTCTCCTaGAGGCCTTTGTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQDPSLS*RPLSGL
Trigger: CAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTC...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR CCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCTTGGTGACCACAAGGTaGGACCCCAGTCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPALVTTR*DPSLSW
Trigger: CCAGGAGAGACTGGGGTCCCACCTTGTGGTCACCAA...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR CCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACACTTGCAGGACAGAGCTaGGTGGCTGTGTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTLAGQS*VAVFRG
Trigger: TCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAG...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCACTTGCAGGACAGAGCTaGGTGGCTGTGTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: ANQNCTSLVRLWGCGSEALAGQS*VAVFRG
Trigger: TCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAG...TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp ACGGGAGCCACTGGCCCACGGAGCCATCTTCAAAGCCAGTTTGCGATTGATGCAGCTCTGAGGCATGGATaGGCCGGTTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGATGPRSHLQSQFAIDAALRHG*AGSGWA
Trigger: GGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGC...TGCATCAATCGCAAACTGGCTTTGAAGATGGCTCCGTGGGCCAGTGGCTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAAGCCTCGTGCGGTTGTaGGGCTGTGGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKSLVRL*GCGSEA
Trigger: TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCT...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCGAGGGTGACCTGTTCTaGGAGCTGTGCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAEGDLF*ELCSPQ
Trigger: CTGAGGACTGCACAGCTCCCAGAACAGGTCACCCTC...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCCCACAGTGCCACCTTaGGAGCCAAGGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGPTVPP*EPRHTQ
Trigger: CTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAA +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGLPLRS*ACQPPE
Trigger: TTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAA...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCACCTCCCAGGGGCCTaGGGTGCCTTCAGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGHLPGA*GAFSAN
Trigger: ATTGGCACTGAAGGCACCCCAGGCCCCTGGGAGGTG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp AGCCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCTTGGTGACCACAAGGTaGGACCCTGTTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRMRADVSMKREPLAHGALVTTR*DPVPWS
Trigger: GGACCAGGGAACAGGGTCCCACCTTGTGGTCACCAA...GGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR TCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAGAGCAGATGTGTCCATaGAACGGGAGCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKEQMCP*NGSHWP
Trigger: GGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTC...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGTTCAATTCAGCCTCCTaGGGGAGTCTAGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CQLPLRSWACQPPEGPARFNSAS*GSLAPG
Trigger: TCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAA...CCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCATTCAATTCAGCCTCCTaGGGGAGTCTAGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPFNSAS*GSLAPG
Trigger: TCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAA...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCCCCAGGGGAATGACTaGGAGACATTAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGPQGND*ETLARA
Trigger: GGCCCTGGCTAATGTCTCTCAGTCATTCCCCTGGGG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp GCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCAACTCAGCAGCCATCTTaGAGGACAGAGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ANQNCTSLVRLWGCGSEATQQPS*RTELGG
Trigger: GCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGT...TGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR GCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLTPRSL*PTFAQQ
Trigger: CTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGT...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACTGGGGTGCCTTCAGTaGCAATTGCCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPLGCLQ*QLPLRS
Trigger: GGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCCTGGGGTGCCTTCAGTaGCAATTGCCACTCAGATCC +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPILGCLQ*QLPLRS
Trigger: GGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAG...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAGGCAACAACAGCAGGTaGTGCAGACCCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPGNNSR*CRPWIL
Trigger: CAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCC...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCATTGGGCCGGTTCAGGCTaGGCCTTCCCACATAGACGT +
Preference number: 4 (lower is better)
Translates to: QTRTVPASCGCGAVALRHWAGSG*AFPHRR
Trigger: ACGTCTATGTGGGAAGGCCCAGCCTGAACCGGCCCA...ATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCTGTGGCTCTGAGGCATaGATGGGCCGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGCGSEA*MGRFRL
Trigger: CAGCCTGAACCGGCCCATCCATGCCTCAGAGCCACA...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCATCGGGCACCCAGCTaGGGACACCAGGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGHRAPS*GHQGVS
Trigger: AGATACACCCTGGTGTCCCCAGCTGGGTGCCCGATG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCTTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAA +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPALPLRS*ACQPPE
Trigger: TTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAA...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTTGCCACTCAGATCCTaGGCTTGCCAACCACCCGAA +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDLPLRS*ACQPPE
Trigger: TTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAA...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPPVPWS*KPTCQA
Trigger: TGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416983.7
CDS-3UTR CCA 90 bp CAGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTCCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: QHPQWQTRTVPASCGCGAPVPWS*KPTCQA
Trigger: TGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGG...AGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp CCGGTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTTCGTCTTCACTGCAATaGAGACATCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PVQAGPSHIDVAGQREGSSSSLQ*RHRVAV
Trigger: TACAGCTACACGATGTCTTCATTGCAGTGAAGACGA...AGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp CCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCATAAGCCAGTTTGCGATTaGTGCAGAAGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PDESRCVHETGATGPRSHKPVCD*CRSQHP
Trigger: GGGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTT...ATGGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR TCA 90 bp ACGGGAGCCACTGGCCCACGGAGCCATCTTCAAAGCCAGTTTGCGATTGATGCAGAGCAGATGTGTCCATaGAACGGGAGCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: TGATGPRSHLQSQFAIDAEQMCP*NGSHWP
Trigger: GGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTC...TGCATCAATCGCAAACTGGCTTTGAAGATGGCTCCGTGGGCCAGTGGCTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCTGTTCTGGGAGCTGTaGAGTCCTCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGLFWEL*SPQQLQ
Trigger: CTGCAGCTGCTGAGGACTGCACAGCTCCCAGAACAG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACTATCACAAGACACTTaGCAGGGACCCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPLSQDT*QGPTVP
Trigger: TGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCGGCCCTGCCAGGGACTaGCTATCACAAGACACTTGC +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGGPARD*LSQDTC
Trigger: GCAAGTGTCTTGTGATAGGCAGTCCCTGGCAGGGCC...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCGCCTTCAGTGCCAATTaGCACTCAGATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GPGVPSVPIATQILGLPTAFSAN*HSDPGL
Trigger: AAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGC...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp TGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGCCTTCAGTGCCAATTaGCACTCAGATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CQLPLRSWACQPPEGPARAFSAN*HSDPGL
Trigger: AAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGC...CCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGCCTTCAGTGCCAATTaGCACTCAGATCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLAFSAN*HSDPGL
Trigger: AAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGC...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp TGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGAACAACAGCAGGTGCTaGAGACCCTGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CQLPLRSWACQPPEGPARNNSRC*RPWILP
Trigger: TGGCAGAATCCAGGGTCTGCAGCACCTGCTGTTGTT...CCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCAACAACAGCAGGTGCTaGAGACCCTGGATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPINNSRC*RPWILP
Trigger: TGGCAGAATCCAGGGTCTGCAGCACCTGCTGTTGTT...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCGGGGACAGGTTCAAGTaGTACCGCAGACACAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGGDRFK*YRRHRS
Trigger: GCTCCTGTGTCTGCGGTACCACTTGAACCTGTCCCC...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCATGGGGACAGGTTCAAGTaGTACCGCAGACACAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTRTVPASCGCGAVALRHGDRFK*YRRHRS
Trigger: GCTCCTGTGTCTGCGGTACCACTTGAACCTGTCCCC...ATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTCAAATGTCTGTTCCCTaGTCCTGGAAACCCACGTGT +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGQMSVP*SWKPTC
Trigger: ACACGTGGGTTTCCAGGACCAGGGAACAGACATTTG...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR CCA 90 bp CCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PSGKPELYQPRAVVGLWLLEAFV*AVGEDK
Trigger: TTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAG...GAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCGAGGGTGACCTGTTCTaGGAGCTGTGCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGEGDLF*ELCSPQ
Trigger: CTGAGGACTGCACAGCTCCCAGAACAGGTCACCCTC...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCAGGTGCTGCAGACCCTaGATTCTGCCATCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GPGVPSVPIATQILGLPTRCCRP*ILPSFH
Trigger: GTGGAATGATGGCAGAATCCAGGGTCTGCAGCACCT...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAGGTGCTGCAGACCCTaGATTCTGCCATCATTCCAC +
Preference number: 4 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPRCCRP*ILPSFH
Trigger: GTGGAATGATGGCAGAATCCAGGGTCTGCAGCACCT...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCACTTTGGGAGACTGGTTaGCAACAACAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPLWETG*QQQQVL
Trigger: CAGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAG...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCCTTTGGGAGACTGGTTaGCAACAACAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPILWETG*QQQQVL
Trigger: CAGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAG...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCGGGAGCAAGGAGCTTTaGGAGACTGGTTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIGSKEL*ETGWQQ
Trigger: TTGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCC...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAGGGAGCAAGGAGCTTTaGGAGACTGGTTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPGSKEL*ETGWQQ
Trigger: TTGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCC...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGTTGTCACCTGTTCCCTaGTCCTGGAAACCCACGTGT +
Preference number: 4 (lower is better)
Translates to: HPQWQTRTVPASCGCGAVLSPVP*SWKPTC
Trigger: ACACGTGGGTTTCCAGGACCAGGGAACAGGTGACAA...CACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR TCA 90 bp GTTCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGTCGTCTTCACTGCAATaGAGACATCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VQAGPSHIDVAGQREGSQSSSLQ*RHRVAV
Trigger: TACAGCTACACGATGTCTTCATTGCAGTGAAGACGA...CTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR TCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCAAGCCAGTTTGCGATTaGTGCAGAAGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGKPVCD*CRSQHP
Trigger: GGGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTT...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCCCAGCTTGCACTCAATaGTATAGCCCATGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIPACTQ*YSPWCS
Trigger: ACTGCACCATGGGCTATATCATTGAGTGCAAGCTGG...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACCAGCTTGCACTCAATaGTATAGCCCATGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPPACTQ*YSPWCS
Trigger: ACTGCACCATGGGCTATATCATTGAGTGCAAGCTGG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp AGCCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCCCAGCTTGCACTCAATaGTATAGCCCATGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRMRADVSMKREPLAHGAPACTQ*YSPWCS
Trigger: ACTGCACCATGGGCTATATCATTGAGTGCAAGCTGG...GGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR GCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKTPRSL*PTFAQQ
Trigger: CTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGT...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp TGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAAGCTCAAGTGCCCCCTaGCCTTTTTCAATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLGPVMLHHLGPGMLRLQSSSAP*PFSIQP
Trigger: AGGCTGAATTGAAAAAGGGCAGGGGGCACTTGAGCT...TTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAGCAGACCCTGGATTCTaGCATCATTCCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTADPGF*HHSTHV
Trigger: GACATGGGTGGAATGATGGCAGAATCCAGGGTCTGC...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACGGGAGCCACTGGCCCACGGAGCCATCTTCAAAGCCAGTTTGCGATTGATGCAGGGGACAGGTTCAAGTaGTACCGCAGACACAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGATGPRSHLQSQFAIDAGDRFK*YRRHRS
Trigger: GCTCCTGTGTCTGCGGTACCACTTGAACCTGTCCCC...TGCATCAATCGCAAACTGGCTTTGAAGATGGCTCCGTGGGCCAGTGGCTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCACACCAGGGTGTATCTaGATAGAGCAGACAATGGAG +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPTPGCI*IEQTME
Trigger: CTCCATTGTCTGCTCTATCCAGATACACCCTGGTGT...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTACACCAGGGTGTATCTaGATAGAGCAGACAATGGAG +
Preference number: 4 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGTPGCI*IEQTME
Trigger: CTCCATTGTCTGCTCTATCCAGATACACCCTGGTGT...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACGCTCCAAACAAAATCTaGTCCTGTTCGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDAPNKI*SCSQGV
Trigger: CACCCCTTGCGAACAGGACCAGATTTTGTTTGGAGC...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGGCTCTGAGGCATCCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: QTRTVPASCGCGAVALRHPVPWS*KPTCQA
Trigger: TGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGG...ATGCCTCAGAGCCACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAATTGTCACCTGTTCCCTaGTCCTGGAAACCCACGTGT +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQLSPVP*SWKPTC
Trigger: ACACGTGGGTTTCCAGGACCAGGGAACAGGTGACAA...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416983.7
CDS-3UTR CCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCTTGGTGACCACAAGGTaGGACCTTGTCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCLVTTR*DLVTCS
Trigger: GGAACAGGTGACAAGGTCCCACCTTGTGGTCACCAA...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416983.7
3UTR CAA 72 bp ATCACAAGACACTTGCCAGGGACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ITRHLPGTHSAT*GAKAHPEVSAQ
Trigger: TTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCTCGTCTTCACTGCAATaGAGACATCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPSSSLQ*RHRVAV
Trigger: TACAGCTACACGATGTCTTCATTGCAGTGAAGACGA...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGGGGAATAGCTGTGGATaGTTGTCTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLGNSCG*LSWPFL
Trigger: AAGGAAAGGCCAAGACAATCATCCACAGCTATTCCC...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCTATCACAAGACACTTaGCAGGGACCCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGLSQDT*QGPTVP
Trigger: TGGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGGCTCTGAGGCATGGATaGGCCGGTTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELALRHG*AGSGWA
Trigger: GGCCCAGCCTGAACCGGCCCATCCATGCCTCAGAGC...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGGGAGGGAGCGAAATCTaGAGGGGTCCTCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELGGSEI*RGPPPG
Trigger: CCCCGGAGGAGGACCCCTCCAGATTTCGCTCCCTCC...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAACACCAGGGTGTATCTaGATAGAGCAGACAATGGAG +
Preference number: 4 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPTPGCI*IEQTME
Trigger: CTCCATTGTCTGCTCTATCCAGATACACCCTGGTGT...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGTCTCTGGCCACCACCTaGTCCACCTGGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELSLATT*STWSPG
Trigger: CCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGCTCCAAACAAAATCTaGTCCTGTTCGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQAPNKI*SCSQGV
Trigger: CACCCCTTGCGAACAGGACCAGATTTTGTTTGGAGC...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAAGGATCATCACAATTaGCTGGGACCCGTTATGCTC +
Preference number: 4 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLKDHHN*LGPVML
Trigger: GAGCATAACGGGTCCCAGCCAATTGTGATGATCCTT...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTTTATAGCAGGAAGATaGGGAGTGGGCTGCAAAACC +
Preference number: 4 (lower is better)
Translates to: QLPLRSWACQPPEGPARDFIAGR*GVGCKT
Trigger: GGTTTTGCAGCCCACTCCCCATCTTCCTGCTATAAA...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCGAGCGAAATCTGTTCTaGGAGCTGTGCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGERNLF*ELCSPQ
Trigger: CTGAGGACTGCACAGCTCCCAGAACAGATTTCGCTC...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454291.1
CDS-3UTR TCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCTCGTCTTCACTGCAATaGAGACATCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPASSSLQ*RHRVAV
Trigger: TACAGCTACACGATGTCTTCATTGCAGTGAAGACGA...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGGGAATAGCTGTGGATaGTTGTCTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQGNSCG*LSWPFL
Trigger: AAGGAAAGGCCAAGACAATCATCCACAGCTATTCCC...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAATCTCTGCCCAACCTTTaGCCAGCAGTTCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKSLPNL*PAVQDS
Trigger: TGAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGA...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCTCTCTGCCCAACCTTTaGCCAGCAGTTCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGSLPNL*PAVQDS
Trigger: TGAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGA...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCAGCTCAAGTGCCCCCTaGCCTTTTTCAATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGSSSAP*PFSIQP
Trigger: AGGCTGAATTGAAAAAGGGCAGGGGGCACTTGAGCT...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGCCAGAGGCTGAGCCATaGCAGCACGATCTCGACCGC +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELPEAEP*QHDLDR
Trigger: GCGGTCGAGATCGTGCTGCCATGGCTCAGCCTCTGG...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAAAGGATCATCACAATTaGCTGGGACCCGTTATGCTC +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQKDHHN*LGPVML
Trigger: GAGCATAACGGGTCCCAGCCAATTGTGATGATCCTT...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGGTGGGGCTGTGGCTCTaGGGCATGGATGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQVGLWL*GMDGPV
Trigger: AACCGGCCCATCCATGCCTCAGAGCCACAGCCCCAC...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGAAAGGCTGGGAAATaGGCAAAAAGGATCATCACA +
Preference number: 4 (lower is better)
Translates to: QCQLPLRSWACQPPEGPARKAGK*AKRIIT
Trigger: TGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTCT...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAAATCATCACAATTGGCTaGGACCCGTTATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKIITIG*DPLCSI
Trigger: GATGGAGCATAACGGGTCCCAGCCAATTGTGATGAT...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCTTTATAGCAGGAAGATaGGGAGTGGGCTGCAAAACC +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGFIAGR*GVGCKT
Trigger: GGTTTTGCAGCCCACTCCCCATCTTCCTGCTATAAA...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCAGAAAGGCTGGGAAATaGGCAAAAAGGATCATCACA +
Preference number: 4 (lower is better)
Translates to: SVPIATQILGLPTTRRPCRKAGK*AKRIIT
Trigger: TGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTCT...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp TTCCCTCTGGCCAGAGCTGGTCCCATGGTAGCCCCTAACAGCAAGAAAGGCTGGCATCTCTATTGGATTTaGTTAGTTCCCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLARAGPMVAPNSKKGWHLYWI*LVPSGQ
Trigger: CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATG...CCAGCCTTTCTTGCTGTTAGGGGCTACCATGGGACCAGCTCTGGCCAGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCATCTCTATTGGATTTaGTTAGTTCCCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGHLYWI*LVPSGQ
Trigger: CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCAGGACAGAGCTGGGTaGCTGTGTTCCGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQQDRAG*LCSAEQ
Trigger: CTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCAACAGCAAGAAAGGCTaGGAAATGAGCAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GPGVPSVPIATQILGLPTNSKKG*EMSKKD
Trigger: ATCCTTTTTGCTCATTTCCCAGCCTTTCTTGCTGTT...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCCCCAGGGGAATGACTaGGAGACATTAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQPQGND*ETLARA
Trigger: GGCCCTGGCTAATGTCTCTCAGTCATTCCCCTGGGG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCTCAGATCCTGGGCTTaGCAACCACCCGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQLRSWA*QPPEGP
Trigger: AGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGGGCAACAACAGCAGGTaGTGCAGACCCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELGNNSR*CRPWIL
Trigger: CAGAATCCAGGGTCTGCAGCACCTGCTGTTGTTGCC...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAAACAGCAAGAAAGGCTaGGAAATGAGCAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: RSWACQPPEGPARDCLSQNSKKG*EMSKKD
Trigger: ATCCTTTTTGCTCATTTCCCAGCCTTTCTTGCTGTT...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGTGTCTGGGCTGTCGGTaGAGACAAATGTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELCLGCR*RQMSVP
Trigger: GGGAACAGACATTTGTCTTCACCGACAGCCCAGACA...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR CCA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGTCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSPETSLLDLLSSLWPELSVPWS*KPTCQA
Trigger: TGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGA...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
3UTR CAA 72 bp GAAAGGCTGGGAAATGAGCAAAAAGGATCATCACAATaGGCTGGGACCCGTTATGCTCCATCATCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ERLGNEQKGSSQ*AGTRYAPSSGP
Trigger: GGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAATTGTGATGATCCTTTTTGCTCATTTCCCAGCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
3UTR CAA 72 bp GCTGCAAAACCTTCCCCAGAAACATCTCTATTGGATTaGCTTAGTTCCCTCTGGCCAGAGCTGGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AAKPSPETSLLD*LSSLWPELVPW
Trigger: CCATGGGACCAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR TCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAAGCCAGTTTGCGATTaGTGCAGAAGCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQKPVCD*CRSQHP
Trigger: GGGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTT...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR GCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGGCAGACCCTGGATTCTaGCATCATTCCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQADPGF*HHSTHV
Trigger: GACATGGGTGGAATGATGGCAGAATCCAGGGTCTGC...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQLEAFV*AVGEDK
Trigger: TTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAG...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR GCA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTCAAGTGCCCCCTaGCCTTTTTCAATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQSSSAP*PFSIQP
Trigger: AGGCTGAATTGAAAAAGGGCAGGGGGCACTTGAGCT...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACCAGCTCGGGGGTCCCTaGTACCCGCTGCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QLPLRSWACQPPEGPARDQLGGP*YPLRGQ
Trigger: CTGTCCCCGCAGCGGGTACAAGGGACCCCCGAGCTG...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAACCGGCACTGCATTGGTaGGCCCTGGGACCCCAGACA +
Preference number: 5 (lower is better)
Translates to: SGWAFPHRRRGPAGRLSEPALHW*ALGPQT
Trigger: TGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGG...TTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGGGCGGCCCAGCGCTaGAGCCCCAGGGGAATGACT +
Preference number: 5 (lower is better)
Translates to: QLPLRSWACQPPEGPARDWAAQR*SPRGMT
Trigger: AGTCATTCCCCTGGGGCTCAAGCGCTGGGCCGCCCA...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGCCGGCACTGCATTGGTaGGCCCTGGGACCCCAGACA +
Preference number: 5 (lower is better)
Translates to: HPQWQTRTVPASCGCGAVPALHW*ALGPQT
Trigger: TGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGG...CACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPTHSAT*GAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGT...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp TCTCTGGCCACCACCTGGTCCACCTGGTCCCCTGGGCTGTCTAACTCACCTCCCACTCAGATCCTGGGCTaGCCAACCACCCGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: SLATTWSTWSPGLSNSPPTQILG*PTTRRP
Trigger: GGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT...GGGAGGTGAGTTAGACAGCCCAGGGGACCAGGTGGACCAGGTGGTGGCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp TGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCATGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: WAFPHRRRGPAGRLSEAACSAEQ*VTTRWD
Trigger: GTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACA...TGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: TQILGLPTTRRPCQGLPITHSAT*GAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGT...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAACTCAGATCCTGGGCTaGCCAACCACCCGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPTQILG*PTTRRP
Trigger: GGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCTGGGCGGCCCAGCGCTaGAGCCCCAGGGGAATGACT +
Preference number: 5 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGWAAQR*SPRGMT
Trigger: AGTCATTCCCCTGGGGCTCAAGCGCTGGGCCGCCCA...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS GCA 90 bp GAGCAAGGTTCTAGGTCCCACTGGGCTCTGTCCCCTCAGGCCTTCTaGGTGACACCACGCCAGCCAGCACTTCCTCTCTCTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: EQGSRSHWALSPQAF*VTPRQPALPLSGLS
Trigger: ACTGAGGCCAGAGAGAGGAAGTGCTGGCTGGCGTGGTGTCACGCAGAAGGCCTGAGGGGACAGAGCCCAGTGGGACCTAGAACCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442496.1
CDS-3UTR CAA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCCCGGCACTGCATTGGTaGGCCCTGGGACCCCAGACA +
Preference number: 5 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGPALHW*ALGPQT
Trigger: TGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGG...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp AGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: STPSGKPELYQPRAVVGLLSWRP*SGLSVK
Trigger: CTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAG...CAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS-3UTR CAA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: GPGVPSVPIATQILGLPTCSAEQ*VTTRWD
Trigger: GTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACA...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: HPQWQTRTVPASCGCGAVCSAEQ*VTTRWD
Trigger: GTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACA...CACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp TGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: WAFPHRRRGPAGRLSEAANSAAI*QDRAGW
Trigger: CCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTT...TGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAACCCACAGTGCCACCTaGGGAGCCAAGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: RSWACQPPEGPARDCLSQTHSAT*GAKAHP
Trigger: TGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGT...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TTGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCACCACAAGGTGGGACCTaGTCACCTGTTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LAGTRYAPSSGPRHAEAPPQGGT*SPVPWS
Trigger: GGACCAGGGAACAGGTGACAAGGTCCCACCTTGTGG...TGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416983.7
CDS GCA 90 bp GACCCACAGTGCCACCTTGGGAGCCAAGGCACACCCAGAAGTCTCTaGCCAACCTTTGCCCAGCAGTTCAGGATTCATCGGGCACCCAGC +
Preference number: 5 (lower is better)
Translates to: DPQCHLGSQGTPRSL*PTFAQQFRIHRAPS
Trigger: GCTGGGTGCCCGATGAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGCACTGTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAACTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RSWACQPPEGPARDCLSQLSWRP*SGLSVK
Trigger: CTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAG...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS-3UTR CAA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QLPLRSWACQPPEGPARDNSAAI*QDRAGW
Trigger: CCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTT...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGTGAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HPQWQTRTVPASCGCGAVNSAAI*QDRAGW
Trigger: CCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTT...CACAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp CAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGAAAGCCAGTTTGCGATaGATGCAGAAGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: QAGPSHIDVAGQREGSQKKASLR*MQKPAP
Trigger: GGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTTT...CTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACCTATCACAAGACACTaGCCAGGGACCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPPITRH*PGTHSA
Trigger: GGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGCCTATCACAAGACACTaGCCAGGGACCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLPITRH*PGTHSA
Trigger: GGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGG...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTGCCTTCAGTGCCAATaGCCACTCAGATCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGCLQCQ*PLRSWA
Trigger: AGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCA...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAGGGGAGCAAGGAGCTTaGGGAGACTGGTTGGCAACA +
Preference number: 5 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPGEQGA*GDWLAT
Trigger: TGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCCC...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS GCA 90 bp GCTGCCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATGCACTTaGCCGCAACGACCCTCAAACCTCACGAGGCAGGCGTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: AASQPSPALPDWTCT*PQRPSNLTRQALSS
Trigger: AGATGACAACGCCTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS GCA 90 bp GGAAATGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATaGACTTGCCCGCAACGACCCTCAAACCTCACGAGGCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: GNAASQPSPALPDWT*TCPQRPSNLTRQAL
Trigger: CAACGCCTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS-3UTR CAA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTNSAAI*QDRAGW
Trigger: CCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTT...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCAGCTGCAGCAGCGCCCTaGGGTTCACATAGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPAAAAP*GSHSCH
Trigger: ATGACAACTATGTGAACCCAAGGGCGCTGCTGCAGC...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp AGCACCCCCAGTGGCAAACCAGAACTGTACCAGCCTCGTGCGGTTGTGGGGCTGGCTGCAGCAGCGCCCTaGGGTTCACATAGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: STPSGKPELYQPRAVVGLAAAAP*GSHSCH
Trigger: ATGACAACTATGTGAACCCAAGGGCGCTGCTGCAGC...CAGCCCCACAACCGCACGAGGCTGGTACAGTTCTGGTTTGCCACTGGGGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp AGCCGGATGAGAGCAGATGTGTCCATGAAACGGGAGCCACTGGCCCACGGAGCCGCTGCAGCAGCGCCCTaGGGTTCACATAGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SRMRADVSMKREPLAHGAAAAAP*GSHSCH
Trigger: ATGACAACTATGTGAACCCAAGGGCGCTGCTGCAGC...GGCTCCGTGGGCCAGTGGCTCCCGTTTCATGGACACATCTGCTCTCATCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CAA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTAAAGCCAGTTTGCGATaGATGCAGAAGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGKASLR*MQKPAP
Trigger: GGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTTT...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACACCTATCACAAGACACTaGCCAGGGACCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTPITRH*PGTHSA
Trigger: GGCACTGTGGGTCCCTGGCAAGTGTCTTGTGATAGG...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TGGCTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAATGCCTTCAGTGCCAATaGCCACTCAGATCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WLGPVMLHHLGPGMLRLQCLQCQ*PLRSWA
Trigger: AGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCA...TTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp ACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGTGCCTTCAGTGCCAATaGCCACTCAGATCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TARPHPEAMSLPKGLGPLCLQCQ*PLRSWA
Trigger: AGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCA...CAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS-3UTR CAA 90 bp CAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCGCTTTGGGAGACTGGTaGGCAACAACAGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: QCQLPLRSWACQPPEGPAALGDW*ATTAGA
Trigger: AGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGC...GGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp AGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCACAAGGGGAGCAAGGAGCTTaGGGAGACTGGTTGGCAACA +
Preference number: 5 (lower is better)
Translates to: RSWACQPPEGPARDCLSQGEQGA*GDWLAT
Trigger: TGTTGCCAACCAGTCTCCCAAAGCTCCTTGCTCCCC...TTGTGATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS CCA 90 bp GTCCTGGAAACCCACGTGTCAAGCAGCAGCTCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTCACTGCAATGAAGACATCGTGTAGC +
Preference number: 5 (lower is better)
Translates to: VLETHVSSSSSRRKR*KARVVFTAMKTSCS
Trigger: GCTACACGATGTCTTCATTGCAGTGAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGAGCTGCTGCTTGACACGTGGGTTTCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000424765.2
ENST00000430411.1
ENST00000438891.5
CDS CCA 90 bp CATCTCGGAAATGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATTaGACATGCACTTGCCCGCAACGACCCTCAAACCTCACGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HLGNAASQPSPALPD*TCTCPQRPSNLTRQ
Trigger: CTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS-3UTR CAA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCAAAGCCAGTTTGCGATaGATGCAGAAGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIKASLR*MQKPAP
Trigger: GGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTTT...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp GGGCTGCAGGCGGCCGCCCAGCTTGCACTCAATGATATAGCCCATGGTGCAGTCAAAGCCAGTTTGCGATaGATGCAGAAGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GLQAAAQLALNDIAHGAVKASLR*MQKPAP
Trigger: GGGTGCTGGCTTCTGCATCAATCGCAAACTGGCTTT...GACTGCACCATGGGCTATATCATTGAGTGCAAGCTGGGCGGCCGCCTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CAA 90 bp CTGGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAGTCTCTGCCCAACCTTaGCCCAGCAGTTCAGGATTC +
Preference number: 5 (lower is better)
Translates to: LGPVMLHHLGPGMLRLQTVSAQP*PSSSGF
Trigger: GAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGAC...TGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCGCTTTGGGAGACTGGTaGGCAACAACAGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SVPIATQILGLPTTRRPCALGDW*ATTAGA
Trigger: AGCACCTGCTGTTGTTGCCAACCAGTCTCCCAAAGC...GCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAGCTGCAGGTGAAGACAAATGTTaGTCACCTGTTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: WAFPHRRRGPAGRLSEAAGEDKC*SPVPWS
Trigger: GGACCAGGGAACAGGTGACAAACATTTGTCTTCACC...TGCAGCTTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CCA 90 bp GGTGACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTGTTCCCTGGTCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: GDHKVGPQSLLEAFV*AVGEDKCLFPGPGN
Trigger: GTTTCCAGGACCAGGGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS CCA 90 bp TGGGCTGTCGGTGAAGACAAATGTTTGTCACCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCAGCAGCTCCAGGCGCAAGCGGTGGA +
Preference number: 5 (lower is better)
Translates to: WAVGEDKCLSPVPWS*KPTCQAAAPGASGG
Trigger: TCCACCGCTTGCGCCTGGAGCTGCTGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGGTGACAAACATTTGTCTTCACCGACAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CCA 90 bp GGTGACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTTTGTCACCTGTTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GDHKVGPQSLLEAFV*AVGEDKCLSPVPWS
Trigger: GGACCAGGGAACAGGTGACAAACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CCA 90 bp GGTGACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTTCACAGCCACACAAACCCC +
Preference number: 5 (lower is better)
Translates to: GDHKVGPQSLLEAFV*AVGEDKCLHSHTNP
Trigger: GGGGTTTGTGTGGCTGTGAAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS-3UTR CAA 90 bp GCCCTTTTTCAATTCAGCCTCCTGAGGGAGTCTAGCCCCTGGAGCCTCTCTGGCGTCTCTGCCCAACCTTaGCCCAGCAGTTCAGGATTC +
Preference number: 5 (lower is better)
Translates to: ALFQFSLLRESSPWSLSGVSAQP*PSSSGF
Trigger: GAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGAC...GCCAGAGAGGCTCCAGGGGCTAGACTCCCTCAGGAGGCTGAATTGAAAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS GCA 90 bp CTTCACAGCCACACAAACCCCCTGTGCAAGCCATCTCGGAAATGCTaGCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATGCACTTG +
Preference number: 5 (lower is better)
Translates to: LHSHTNPLCKPSRKC*LTTQSGSPRLDMHL
Trigger: CAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGGCTTGCACAGGGGGTTTGTGTGGCTGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS GCA 90 bp TGTCTTCACAGCCACACAAACCCCCTGTGCAAGCCATCTCGGAAATaGTGCCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATGCAC +
Preference number: 5 (lower is better)
Translates to: CLHSHTNPLCKPSRK*CLTTQSGSPRLDMH
Trigger: GTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGGCTTGCACAGGGGGTTTGTGTGGCTGTGAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS-3UTR CAA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGCCGGCACTGCATTGGTaGGCCCTGGGACCCCAGACA +
Preference number: 5 (lower is better)
Translates to: PSPETSLLDLLSSLWPELPALHW*ALGPQT
Trigger: TGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGG...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp AGCCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTATCTTCAAAGCCAGTTaGCGATTGATGCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SQGQRPDPTQRPCHCLKGIFKAS*RLMQKP
Trigger: TGGCTTCTGCATCAATCGCAAACTGGCTTTGAAGAT...ACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp TCAGGCTGGGCCTTCCCACATAGACGTCGCGGGCCAGCGGGAAGGCTCTCAGAAATCTTCAAAGCCAGTTaGCGATTGATGCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SGWAFPHRRRGPAGRLSEIFKAS*RLMQKP
Trigger: TGGCTTCTGCATCAATCGCAAACTGGCTTTGAAGAT...TTCTGAGAGCCTTCCCGCTGGCCCGCGACGTCTATGTGGGAAGGCCCAGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430411.1
ENST00000438891.5
CDS-3UTR CAA 90 bp CCAGGGCCAACGGCCAGACCCCACCCAGAGGCCATGTCACTGCCTAAAGGGTTAAAAGGATCATCACAATaGGCTGGGACCCGTTATGCT +
Preference number: 5 (lower is better)
Translates to: PGPTARPHPEAMSLPKGLKGSSQ*AGTRYA
Trigger: AGCATAACGGGTCCCAGCCAATTGTGATGATCCTTT...TAACCCTTTAGGCAGTGACATGGCCTCTGGGTGGGGTCTGGCCGTTGGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CAATTGCCACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACAAAGGATCATCACAATaGGCTGGGACCCGTTATGCT +
Preference number: 5 (lower is better)
Translates to: QLPLRSWACQPPEGPARDKGSSQ*AGTRYA
Trigger: AGCATAACGGGTCCCAGCCAATTGTGATGATCCTTT...GTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGTGGCAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS GCA 90 bp GCTGTCGGTGAAGACAAATGTCTTCACAGCCACACAAACCCCCTGTaGAAGCCATCTCGGAAATGCTGCCTCACAACCCAGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: AVGEDKCLHSHTNPL*KPSRKCCLTTQSGS
Trigger: AGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGGCTTGCACAGGGGGTTTGTGTGGCTGTGAAGACATTTGTCTTCACCGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS-3UTR CAA 90 bp ACTCAGATCCTGGGCTTGCCAACCACCCGAAGGCCCTGCCAGGGACTGCCTATCATCTTCAAAGCCAGTTaGCGATTGATGCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: TQILGLPTTRRPCQGLPIIFKAS*RLMQKP
Trigger: TGGCTTCTGCATCAATCGCAAACTGGCTTTGAAGAT...GATAGGCAGTCCCTGGCAGGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp GGGCTGCAGGCGGCCGCCCAGCTTGCACTCAATGATATAGCCCATGGTGCAGTCATCTTCAAAGCCAGTTaGCGATTGATGCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GLQAAAQLALNDIAHGAVIFKAS*RLMQKP
Trigger: TGGCTTCTGCATCAATCGCAAACTGGCTTTGAAGAT...GACTGCACCATGGGCTATATCATTGAGTGCAAGCTGGGCGGCCGCCTGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS-3UTR CAA 90 bp CCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGAGCTGACTCAGATCCTGGGCTaGCCAACCACCCGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PSPETSLLDLLSSLWPELTQILG*PTTRRP
Trigger: GGGCCTTCGGGTGGTTGGCAAGCCCAGGATCTGAGT...CAGCTCTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGTGGGCGGCCCAGCGCTaGAGCCCCAGGGGAATGACT +
Preference number: 5 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQWAAQR*SPRGMT
Trigger: AGTCATTCCCCTGGGGCTCAAGCGCTGGGCCGCCCA...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CACCCAGAGGCCATGTCACTGCCTAAAGGGTTAGGACCCCTGAGCCCCAGCCCACCAGAAACATCTCTATaGGATTTGCTTAGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: HPEAMSLPKGLGPLSPSPPETSL*DLLSSL
Trigger: GAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGG...TGGGCTGGGGCTCAGGGGTCCTAACCCTTTAGGCAGTGACATGGCCTCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp GGGCCTGGGGTGCCTTCAGTGCCAATTGCCACTCAGATCCTGGGCTTGCCAACCCCAGAAACATCTCTATaGGATTTGCTTAGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: GPGVPSVPIATQILGLPTPETSL*DLLSSL
Trigger: GAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGG...GGTTGGCAAGCCCAGGATCTGAGTGGCAATTGGCACTGAAGGCACCCCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS CCA 90 bp CCAGATGGACTCTGTACTCCTCCAGTGACAGACACACCCCTCTCATaGTCACACGCTCCTTTAGGACAACATACAACACACACAACCCAG +
Preference number: 5 (lower is better)
Translates to: PDGLCTPPVTDTPLS*SHAPLGQHTTHTTQ
Trigger: CTGGGTTGTGTGTGTTGTATGTTGTCCTAAAGGAGCGTGTGACCATGAGAGGGGTGTGTCTGTCACTGGAGGAGTACAGAGTCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466943.1
CDS-3UTR CAA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQCSAEQ*VTTRWD
Trigger: GTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACA...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp GGGACCCGTTATGCTCCATCATCTGGGCCCCGGCATGCTGAGGCTCCAAACAAATGTAGCTTAATGACGTaGAGTTTCCCCTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: GTRYAPSSGPRHAEAPNKCSLMT*SFPSKT
Trigger: TGTCTTTGAGGGGAAACTCAACGTCATTAAGCTACA...TTTGTTTGGAGCCTCAGCATGCCGGGGCCCAGATGATGGAGCATAACGGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGGCTGCAGCAGCGCCCTaGGGTTCACATAGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQAAAAP*GSHSCH
Trigger: ATGACAACTATGTGAACCCAAGGGCGCTGCTGCAGC...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS-3UTR CAA 90 bp CAAAACCTTCCCCAGAAACATCTCTATTGGATTTGCTTAGTTCCCTCTGGCCAGTGTAGCTTAATGACGTaGAGTTTCCCCTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: QNLPQKHLYWICLVPSGQCSLMT*SFPSKT
Trigger: TGTCTTTGAGGGGAAACTCAACGTCATTAAGCTACA...CTGGCCAGAGGGAACTAAGCAAATCCAATAGAGATGTTTCTGGGGAAGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000416983.7
CDS GCA 72 bp AGGAGGGCTCCAGCCAGGCCCCGCGGGAGCCGGCACTaGATTGGTTGGCCCTGGGACCCCAGACAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RRAPARPRGSRH*IGWPWDPRQLS
Trigger: GCTGAGCTGTCTGGGGTCCCAGGGCCAACCAATGCAGTGCCGGCTCCCGCGGGGCCTGGCTGGAGCCCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000424765.2
ENST00000430411.1
ENST00000438891.5
CDS GCA 72 bp TTCGGCTGGCTCAGCTCGGGGGTCCCTTGTACCCGCTaGGGGGACAGGTTCAAGTGGTACCGCAGACACAGG +
Preference number: 6 (lower is better)
Translates to: FGWLSSGVPCTR*GDRFKWYRRHR
Trigger: CCTGTGTCTGCGGTACCACTTGAACCTGTCCCCGCAGCGGGTACAAGGGACCCCCGAGCTGAGCCAGCCGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000424765.2
ENST00000430411.1
ENST00000438891.5
CDS TCA 72 bp ACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCCCAGTCTCTCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TELGGCVPRSSW*PQGGTPVSPGG
Trigger: GCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000430411.1
ENST00000436341.5
ENST00000442496.1
ENST00000466943.1
CDS CAA 72 bp CAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGACCCCAGTCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: QDRAGWLCSAEQ*VTTRWDPSLSW
Trigger: CCAGGAGAGACTGGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000430411.1
ENST00000436341.5
ENST00000442496.1
ENST00000466943.1
CDS CAA 72 bp CAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGACCCTGTTCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: QDRAGWLCSAEQ*VTTRWDPVPWS
Trigger: GGACCAGGGAACAGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS CAA 90 bp GCCACCTTGGGAGCCAAGGCACACCCAGAAGTCTCTGCCCAACCTTaGCCCAGCAGTTCAGGATTCATCGGGCACCCAGCTGGGGACACC +
Preference number: 6 (lower is better)
Translates to: ATLGAKAHPEVSAQP*PSSSGFIGHPAGDT
Trigger: GGTGTCCCCAGCTGGGTGCCCGATGAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCCCAAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS TCA 72 bp ACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTTGGTaGCCACAAGGTGGGACCCTGTTCCCTGGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: TELGGCVPRSSW*PQGGTLFPGPG
Trigger: TCCAGGACCAGGGAACAGGGTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438891.5
CDS GCA 72 bp CAACCCAGTCCGGCTCTCCCAGATTGGACATGCACTTaGCCGCAACGACCCTCAAACCTCACGAGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: QPSPALPDWTCT*PQRPSNLTRQA
Trigger: CGCCTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS GCA 72 bp TCTAGGTCCCACTGGGCTCTGTCCCCTCAGGCCTTCTaGGTGACACCACGCCAGCCAGCACTTCCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SRSHWALSPQAF*VTPRQPALPLS
Trigger: AGAGAGAGGAAGTGCTGGCTGGCGTGGTGTCACGCAGAAGGCCTGAGGGGACAGAGCCCAGTGGGACCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442496.1
CDS GCA 72 bp CACTGGCCAAGAAGGTGTCGAACTCAGCAGCCATCTTaGAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: HWPRRCRTQQPS*RTELGGCVPRS
Trigger: GCTCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTTCGACACCTTCTTGGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000430411.1
ENST00000436341.5
ENST00000438891.5
ENST00000442496.1
CDS GCA 72 bp GCCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATaGACTTGCCCGCAACGACCCTCAAACCTCACGAGG +
Preference number: 6 (lower is better)
Translates to: ASQPSPALPDWT*TCPQRPSNLTR
Trigger: CCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CAA 72 bp CCACTGGCCAAGAAGGTGTCGAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAG +
Preference number: 6 (lower is better)
Translates to: PLAKKVSNSAAI*QDRAGWLCSAE
Trigger: CTCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTTCGACACCTTCTTGGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000430411.1
ENST00000436341.5
ENST00000438891.5
ENST00000442496.1
CDS CAA 72 bp CAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTaGGTGACCACAAGGTGGGACCTTGTCACCTGTTCC +
Preference number: 6 (lower is better)
Translates to: QDRAGWLCSAEQ*VTTRWDLVTCS
Trigger: GGAACAGGTGACAAGGTCCCACCTTGTGGTCACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416983.7
CDS CAA 72 bp ACAACCCAGTCCGGCTCTCCCAGATTGGACATGCACTaGCCCGCAACGACCCTCAAACCTCACGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: TTQSGSPRLDMH*PATTLKPHEAG
Trigger: GCCTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CAA 90 bp CACCTAAGCCCACTGGCCAAGAAGGTGTCGAACTCAGCAGCCATCTaGCAGGACAGAGCTGGGTGGCTGTGTTCCGCGGAGCAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: HLSPLAKKVSNSAAI*QDRAGWLCSAEQLV
Trigger: CACCAACTGCTCCGCGGAACACAGCCACCCAGCTCTGTCCTGCAAGATGGCTGCTGAGTTCGACACCTTCTTGGCCAGTGGGCTTAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000430411.1
ENST00000436341.5
ENST00000438891.5
ENST00000442496.1
CDS CAA 90 bp TGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATTGGACATGCACTaGCCCGCAACGACCCTCAAACCTCACGAGGCAGGCGTTGTCATC +
Preference number: 6 (lower is better)
Translates to: CCLTTQSGSPRLDMH*PATTLKPHEAGVVI
Trigger: GATGACAACGCCTGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CCA 72 bp ACCCACGTGTCAAGCAGCAGCTCCAGGCGCAAGCGGTaGAAAGCCCGGGTCGTCTTCACTGCAATGAAGACA +
Preference number: 6 (lower is better)
Translates to: THVSSSSSRRKR*KARVVFTAMKT
Trigger: TGTCTTCATTGCAGTGAAGACGACCCGGGCTTTCCACCGCTTGCGCCTGGAGCTGCTGCTTGACACGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000424765.2
ENST00000430411.1
ENST00000438891.5
CDS CCA 72 bp AAAGCACCCAACCAGGAGCAAGGTTCTAGGTCCCACTaGGCTCTGTCCCCTCAGGCCTTCTGCGTGACACCA +
Preference number: 6 (lower is better)
Translates to: KAPNQEQGSRSH*ALSPQAFCVTP
Trigger: TGGTGTCACGCAGAAGGCCTGAGGGGACAGAGCCCAGTGGGACCTAGAACCTTGCTCCTGGTTGGGTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442496.1
CDS CCA 72 bp AAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTGCCACCCGAC +
Preference number: 6 (lower is better)
Translates to: KVGPQSLLEAFV*AVGEDKCLPPD
Trigger: GTCGGGTGGCAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442496.1
CDS CAA 72 bp GGAGCCAAGGCACACCCAGAAGTCTCTGCCCAACCTTaGCCCAGCAGTTCAGGATTCATCGGGCACCCAGCT +
Preference number: 6 (lower is better)
Translates to: GAKAHPEVSAQP*PSSSGFIGHPA
Trigger: AGCTGGGTGCCCGATGAATCCTGAACTGCTGGGCAAAGGTTGGGCAGAGACTTCTGGGTGTGCCTTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356998.8
ENST00000416983.7
ENST00000454291.1
CDS CAA 90 bp CCATCTCGGAAATGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATaGGACATGCACTTGCCCGCAACGACCCTCAAACCTCACGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSRKCCLTTQSGSPR*DMHLPATTLKPHEA
Trigger: TGCCTCGTGAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS TCA 72 bp ACCACCAGGCCCCAGATGGACTCTGTACTCCTCCAGTaGCAGACACACCCCTCTCATGGTCACACGCTCCTT +
Preference number: 6 (lower is better)
Translates to: TTRPQMDSVLLQ*QTHPSHGHTLL
Trigger: AAGGAGCGTGTGACCATGAGAGGGGTGTGTCTGTCACTGGAGGAGTACAGAGTCCATCTGGGGCCTGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466943.1
CDS GCA 72 bp CACACAAACCCCCTGTGCAAGCCATCTCGGAAATGCTaGCTCACAACCCAGTCCGGCTCTCCCAGATTGGAC +
Preference number: 6 (lower is better)
Translates to: HTNPLCKPSRKC*LTTQSGSPRLD
Trigger: GTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGGCTTGCACAGGGGGTTTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS GCA 72 bp AGCCACACAAACCCCCTGTGCAAGCCATCTCGGAAATaGTGCCTCACAACCCAGTCCGGCTCTCCCAGATTG +
Preference number: 6 (lower is better)
Translates to: SHTNPLCKPSRK*CLTTQSGSPRL
Trigger: CAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTTCCGAGATGGCTTGCACAGGGGGTTTGTGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CCA 72 bp GTCAGGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTGTTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: VRGPQSLLEAFV*AVGEDKCLFPG
Trigger: ACCAGGGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424765.2
CDS CCA 72 bp AATGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATTaGACATGCACTTGCCCGCAACGACCCTCAAACCTC +
Preference number: 6 (lower is better)
Translates to: NAASQPSPALPD*TCTCPQRPSNL
Trigger: GAGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CAA 72 bp GAGGAGTCAGGGGACCCCAGTCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAGACAAATGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: EESGDPSLSWRP*SGLSVKTNVCS
Trigger: GGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCCTGACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424765.2
CDS CAA 72 bp ACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAGACAAATGTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TTRWDPSLSWRP*SGLSVKTNVCH
Trigger: GTGGCAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442496.1
CDS TCA 72 bp CCAGTCTCTCCTGGAGGCCTTTGTCTGGGCTGTCGGTaGAGACAAATGTCTGTTCCCTGGTCCTGGAAACCC +
Preference number: 6 (lower is better)
Translates to: PVSPGGLCLGCR*RQMSVPWSWKP
Trigger: GGGTTTCCAGGACCAGGGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356998.8
ENST00000424765.2
CDS CCA 72 bp AAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTGTTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: KVGPQSLLEAFV*AVGEDKCLFPG
Trigger: ACCAGGGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS CCA 72 bp AAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTTCACAGCCAC +
Preference number: 6 (lower is better)
Translates to: KVGPQSLLEAFV*AVGEDKCLHSH
Trigger: GTGGCTGTGAAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CAA 72 bp ACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAGACAAATGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TTRWDPSLSWRP*SGLSVKTNVCS
Trigger: GGAACAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356998.8
CDS CAA 72 bp AAATGCTGCCTCACAACCCAGTCCGGCTCTCCCAGATaGGACATGCACTTGCCCGCAACGACCCTCAAACCT +
Preference number: 6 (lower is better)
Translates to: KCCLTTQSGSPR*DMHLPATTLKP
Trigger: AGGTTTGAGGGTCGTTGCGGGCAAGTGCATGTCCAATCTGGGAGAGCCGGACTGGGTTGTGAGGCAGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS TCA 72 bp CCAGTCTCTCCTGGAGGCCTTTGTCTGGGCTGTCGGTaGAGACAAATGTTTGTCACCTGTTCCCTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: PVSPGGLCLGCR*RQMFVTCSLVL
Trigger: CAGGACCAGGGAACAGGTGACAAACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS TCA 72 bp CCAGTCTCTCCTGGAGGCCTTTGTCTGGGCTGTCGGTaGAGACAAATGTCTTCACAGCCACACAAACCCCCT +
Preference number: 6 (lower is better)
Translates to: PVSPGGLCLGCR*RQMSSQPHKPP
Trigger: AGGGGGTTTGTGTGGCTGTGAAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CCA 72 bp GGTGAAGACAAATGTTTGTCACCTGTTCCCTGGTCCTaGAAACCCACGTGTCAAGCAGCAGCTCCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: GEDKCLSPVPWS*KPTCQAAAPGA
Trigger: TGCGCCTGGAGCTGCTGCTTGACACGTGGGTTTCCAGGACCAGGGAACAGGTGACAAACATTTGTCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CCA 72 bp AAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTCTAGGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: KVGPQSLLEAFV*AVGEDKCLGRR
Trigger: TCTCCTTCCTAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466943.1
CDS CAA 72 bp ACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAGACAAATGTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: TTRWDPSLSWRP*SGLSVKTNVCH
Trigger: GTGACAAACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CAA 72 bp ACCACAAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTaGTCTGGGCTGTCGGTGAAGACAAATGTCTTCACA +
Preference number: 6 (lower is better)
Translates to: TTRWDPSLSWRP*SGLSVKTNVFT
Trigger: TGTGAAGACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436341.5
CDS CCA 72 bp AAGGTGGGACCCCAGTCTCTCCTGGAGGCCTTTGTCTaGGCTGTCGGTGAAGACAAATGTTTGTCACCTGTT +
Preference number: 6 (lower is better)
Translates to: KVGPQSLLEAFV*AVGEDKCLSPV
Trigger: AACAGGTGACAAACATTTGTCTTCACCGACAGCCCAGACAAAGGCCTCCAGGAGAGACTGGGGTCCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430411.1
CDS CCA 72 bp CTCTGTACTCCTCCAGTGACAGACACACCCCTCTCATaGTCACACGCTCCTTTAGGACAACATACAACACAC +
Preference number: 6 (lower is better)
Translates to: LCTPPVTDTPLS*SHAPLGQHTTH
Trigger: GTGTGTTGTATGTTGTCCTAAAGGAGCGTGTGACCATGAGAGGGGTGTGTCTGTCACTGGAGGAGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466943.1