RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFGE8 (Homo sapiens)

Ensembl gene IDs: ENSG00000140545

Ensembl transcript IDs: ENST00000268150.13, ENST00000268151.11, ENST00000542878.5, ENST00000557944.1, ENST00000558018.5, ENST00000558029.5, ENST00000558352.5, ENST00000558773.1, ENST00000559143.1, ENST00000559259.1, ENST00000559770.1, ENST00000559997.5, ENST00000560553.1, ENST00000560937.1, ENST00000566497.5, ENST00000613965.1, ENST00000617199.1

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGCCCAGCAGCTCCAGGCGCAGGGCGA +
Preference number: 1 (lower is better)
Translates to: KPRGSGPMESRKTWG*QVATNSPAAPGAGR
Trigger: TCGCCCTGCGCCTGGAGCTGCTGGGCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 90 bp GCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTaGGGGTGGCAGGTGGCCACTAACAGCCCAGCAGCTCCAGGCGCA +
Preference number: 1 (lower is better)
Translates to: AEKPRGSGPMESRKT*GWQVATNSPAAPGA
Trigger: TGCGCCTGGAGCTGCTGGGCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 90 bp ACCATGCCTGCGCGGTTCAGGCGGGCCAGCTCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGT +
Preference number: 1 (lower is better)
Translates to: TMPARFRRASSGTQC*KPKKVTRTDEAAIC
Trigger: ACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCTGGCCCGCCTGAACCGCGCAGGCATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 90 bp TTGACCATGCCTGCGCGGTTCAGGCGGGCCAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATC +
Preference number: 1 (lower is better)
Translates to: LTMPARFRRASSGTQ*CKPKKVTRTDEAAI
Trigger: GATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCTGGCCCGCCTGAACCGCGCAGGCATGGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 90 bp CCTGCAGCCACTGATCGTTACCGTAGCTCCCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCAGCCGTGCATAGGAGGGGTTCCAGC +
Preference number: 1 (lower is better)
Translates to: PAATDRYRSSPQPRR*SCPACPAVHRRGSS
Trigger: GCTGGAACCCCTCCTATGCACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGGGAGCTACGGTAACGATCAGTGGCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCC +
Preference number: 1 (lower is better)
Translates to: GSAVRTGAGKPHALL*PFLSIPDLLRSLSA
Trigger: GGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR GCA 90 bp GCTCCAGGCGCAGGGCGATGCGGTTGTGCCAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGATGGGCGTCTCAAACAAGTTCTTCT +
Preference number: 1 (lower is better)
Translates to: APGAGRCGCARLQAG*AHSEPGWASQTSSS
Trigger: AGAAGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 90 bp TGGCGCATCCGTTCAGCTCACAGCCCAGTAGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCGTGGGGTACAATCTCACGTACTGAG +
Preference number: 1 (lower is better)
Translates to: WRIRSAHSPVAQSAE*RPCGSSWGTISRTE
Trigger: CTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCTGTGAGCTGAACGGATGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 90 bp GGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTGATGTGTGAGAGAGGGGCTAGGAGA +
Preference number: 1 (lower is better)
Translates to: GQEAVISSLALPGLS*GHHGNVMCERGARR
Trigger: TCTCCTAGCCCCTCTCTCACACATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAGCCTCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR CCA 90 bp AGCCCAGTAGCTCAAAGCGCAGAGTGCAGGCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACTGAGCCTCCACAGGGGTCTCAAACA +
Preference number: 1 (lower is better)
Translates to: SPVAQSAECRPCGSS*GTISRTEPPQGSQT
Trigger: TGTTTGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 90 bp CTGCAAACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACA +
Preference number: 1 (lower is better)
Translates to: LQTQEGHTHRRGGDL*VGNVPILQAQWLDT
Trigger: TGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 90 bp AGAGTGCAGGCCGTGTGGCAGCTCGTGGGGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCAAACAGGTTGACATGCACCGCGTTT +
Preference number: 1 (lower is better)
Translates to: RVQAVWQLVGYNLTY*ASTGVSNRLTCTAF
Trigger: AAACGCGGTGCATGTCAACCTGTTTGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 90 bp AACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTTCG +
Preference number: 1 (lower is better)
Translates to: NPRRSHAQTRRRSVS*QCSHSPGPVARHIS
Trigger: CGAAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 90 bp GGTTGTGCCAGGCTACAGGCAGGATGCGCACATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCTTCTTGTGGGAGTGGTTGTCCCAGT +
Preference number: 1 (lower is better)
Translates to: GCARLQAGCAHSEPG*ASQTSSSCGSGCPS
Trigger: ACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 90 bp GGTACAATCTCACGTACTGAGCCTCCACAGGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGTTCCAGTTACCCACAAACTCCTTGT +
Preference number: 1 (lower is better)
Translates to: GTISRTEPPQGSQTG*HAPRFCSSYPQTPC
Trigger: ACAAGGAGTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 90 bp TCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCTGTGTGTAAGATAGGTATG +
Preference number: 1 (lower is better)
Translates to: SPRTSWEISSHKPPL*QGFLEQISVCKIGM
Trigger: CATACCTATCTTACACACAGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR TCA 90 bp AGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCTGGGGCAGGGCCCGTaGGAGGTGGAGGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: RDRDTRTWDRRSGQGQGNLGQGP*EVEGGK
Trigger: TTTCCCACCCTCCACCTCTCACGGGCCCTGCCCCAG...GTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR-3UTR TCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAACCCATGCCCTCCTCTaGCCTCGCTCCCTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGTHALL*PRSLSP
Trigger: GGGAGAAAGGGAGCGAGGTCAGAGGAGGGCATGGGT...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR-3UTR TCA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGTCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: PQGRRRADGQEAVISSLASPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR-3UTR CCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGACCCCTTCTGTGTCGCTaGGCTTCAGGACAAGGGGCA +
Preference number: 2 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGPLLCR*ASGQGA
Trigger: TGCCCCTTGTCCTGAAGCCCAGCGACACAGAAGGGG...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR-3UTR CCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 2 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALRKTWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCT...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CAA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGC +
Preference number: 2 (lower is better)
Translates to: GIGGPDRGRETTRPT*PFPVHPRPTQIPQC
Trigger: GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR-3UTR TCA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGTCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWSPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR-3UTR GCA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAACTCAGATCCCTCAGTaGCTGGGGGTGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPTQIPQ*LGVAGG
Trigger: GCCACCTGCCACCCCCAGGCACTGAGGGATCTGAGT...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566497.5
3UTR-3UTR CCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFLLSPA*RFRAFL
Trigger: AAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR-3UTR CCA 90 bp GCCACAAACTGGACAGAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCGGGCCACAGCAGTTGTaGCCACATGGTACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ATNWTEPKLRAPWVMMPVGPQQL*PHGTPG
Trigger: CCCTGGGGTACCATGTGGCCACAACTGCTGTGGCCC...GACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTCTGTCCAGTTTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR TCA 90 bp GCCACAAACTGGACAGAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: ATNWTEPKLRAPWVMMPVRRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...GACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTCTGTCCAGTTTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR GCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 2 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGTQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR CAA 90 bp CGAGCCAGGATGGGCGTCTCAAACAAGTTCTTCTTGTGGGAGTGGTaGTCCCAGTTGCCAGGGAAGATCTTACTGCTGCCAGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RARMGVSNKFFLWEW*SQLPGKILLLPVLG
Trigger: CCCCAGGACTGGCAGCAGTAAGATCTTCCCTGGCAACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCTGGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR GCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 2 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALTQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR-3UTR CCA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACATTCTCCAGGCCCAGTaGCTCGACACATTTCGTCTC +
Preference number: 2 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDILQAQ*LDTFRL
Trigger: GAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAAT...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CAA 90 bp AAACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTTC +
Preference number: 2 (lower is better)
Translates to: KPKKVTRTDEAAICE*AMFPFSRPSGSTHF
Trigger: GAAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CCA 90 bp ATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTTCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAA +
Preference number: 2 (lower is better)
Translates to: IGGPDRGRETTRPTLPFPSPRTS*EISSHK
Trigger: TTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA...AGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR TCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCATCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSSPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR-3UTR GCA 90 bp CATTACTGTAGGCAACCTTGTAGGATGCCACAAACTGGACAGAGCCAAAGTTACGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: HYCRQPCRMPQTGQSQSYAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...GTAACTTTGGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCCTACAGTAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CCA 90 bp TCAGGTACTCATGACTGGCCAAGCGGCTGGCACCCTGCGTCACCACACCTGTTATGTGGCAGGGGTTTTTaGAACAGATATCTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: SGTHDWPSGWHPASPHLLCGRGF*NRYLCV
Trigger: TACACACAGATATCTGTTCCAAAAACCCCTGCCACA...TAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CCA 90 bp CCAGGTCTTGTAGCTGCTGGAGGCCGTGATCTGCTTGTCAGGGATGCTGTTATTCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAG +
Preference number: 2 (lower is better)
Translates to: PGLVAAGGRDLLVRDAVIHKPPL*QGFLEQ
Trigger: CTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG...AATAACAGCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCTACAAGACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR GCA 90 bp CCAGGTCTTGTAGCTGCTGGAGGCCGTGATCTGCTTGTCAGGGATGCTGTTATTACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 2 (lower is better)
Translates to: PGLVAAGGRDLLVRDAVITQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...AATAACAGCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCTACAAGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CCA 90 bp TGCAGTGCTGTTTTTAAGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCCTCACCCCAAGTCATaGTCATCTCATCAGCCTCTA +
Preference number: 2 (lower is better)
Translates to: CSAVFKFFMWLALHHSGPPHPKS*SSHQPL
Trigger: TAGAGGCTGATGAGATGACCATGACTTGGGGTGAGG...GGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACTTAAAAACAGCACTGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000613965.1
3UTR CAA 90 bp ACATCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCTGTGTGTAAGATAGGT +
Preference number: 2 (lower is better)
Translates to: TSPRTSWEISSHKPP*WQGFLEQISVCKIG
Trigger: ACCTATCTTACACACAGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 72 bp CCTGCGCGGTTCAGGCGGGCCAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTCACACGCACAGACGAG +
Preference number: 3 (lower is better)
Translates to: PARFRRASSGTQ*CKPKKVTRTDE
Trigger: CTCGTCTGTGCGTGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCTGGCCCGCCTGAACCGCGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp GCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGA +
Preference number: 3 (lower is better)
Translates to: AGPTGKRLLSPA*RFRAFLEATMG
Trigger: TCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR-3UTR CAA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTGCTTCCGGGCCTTTCTaGAGGCCACCATGGGAATGT +
Preference number: 3 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALASGPF*RPPWEC
Trigger: ACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGC...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR GCA 72 bp GCAGGGCGATGCGGTTGTGCCAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGATGGGCGTCTCAAACA +
Preference number: 3 (lower is better)
Translates to: AGRCGCARLQAG*AHSEPGWASQT
Trigger: TGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATaGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: LKGLRSQEAAGP*KAGRPGGGRWP
Trigger: TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
3UTR CCA 72 bp GCTCAAAGCGCAGAGTGCAGGCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACTGAGCCTCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: AQSAECRPCGSS*GTISRTEPPQG
Trigger: CCCCTGTGGAGGCTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp CCTGCTTGTCCAGCCGTGCATAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGGTCTTGTAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PACPAVHRRGSS*RDASPRSCSCW
Trigger: CCAGCAGCTACAAGACCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp ACTGATCGTTACCGTAGCTCCCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCAGCCGTGCATAGGAGG +
Preference number: 3 (lower is better)
Translates to: TDRYRSSPQPRR*SCPACPAVHRR
Trigger: CCTCCTATGCACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGGGAGCTACGGTAACGATCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 72 bp GTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCAGACCTACTCAGATCC +
Preference number: 3 (lower is better)
Translates to: VRTGAGKPHALL*PFLSIPDLLRS
Trigger: GGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR GCA 72 bp CGTTCAGCTCACAGCCCAGTAGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCGTGGGGTACAATCTCA +
Preference number: 3 (lower is better)
Translates to: RSAHSPVAQSAE*RPCGSSWGTIS
Trigger: TGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCTGTGAGCTGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp AGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGA +
Preference number: 3 (lower is better)
Translates to: RSHAQTRRRSVS*QCSHSPGPVAR
Trigger: TCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp GCTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTGATGTGTGAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: AVISSLALPGLS*GHHGNVMCERG
Trigger: CCCTCTCTCACACATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR TCA 72 bp CAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATTCTCCAGGCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: QEGHTHRRGGDL*VGNVPILQAQW
Trigger: CCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp GCCGTGTGGCAGCTCGTGGGGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCAAACAGGTTGACATGC +
Preference number: 3 (lower is better)
Translates to: AVWQLVGYNLTY*ASTGVSNRLTC
Trigger: GCATGTCAACCTGTTTGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CAA 90 bp GCCAGGCTACAGGCAGGATGCGCACATAGCGAGCCAGGATGGGCGTCTCAAACATCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAA +
Preference number: 3 (lower is better)
Translates to: ARLQAGCAHSEPGWASQTSHKPP*WQGFLE
Trigger: TTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGA...TGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp CCCAGTTGCCAGGGAAGATCTTACTGCTGCCAGTCCTaGGGTCCTGGTACTCAGTCCAGTTCGCACTGTCAT +
Preference number: 3 (lower is better)
Translates to: PSCQGRSYCCQS*GPGTQSSSHCH
Trigger: ATGACAGTGCGAACTGGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTGGCAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp GATGCAAGCCCCAGGTCTTGTAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGCTGTTATTCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: DASPRSCSCWRP*SACQGCCYSSG
Trigger: GCCTGAAGAATAACAGCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCTACAAGACCTGGGGCTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp AGGCTACAGGCAGGATGCGCACATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCTTCTTGTGGGAGTGGT +
Preference number: 3 (lower is better)
Translates to: RLQAGCAHSEPG*ASQTSSSCGSG
Trigger: ACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp CAGGTGTACGAGGGGAAGACATCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAACCACCGTTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: QVYEGKTSPRTS*EISSHKPPLWQ
Trigger: CTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGATGTCTTCCCCTCGTACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp CGAGCCAGGATGGGCGTCTCAAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTGCCAGGGAAGATCTTA +
Preference number: 3 (lower is better)
Translates to: RARMGVSNKFFL*EWLSQLPGKIL
Trigger: TAAGATCTTCCCTGGCAACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCTGGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR-3UTR CAA 90 bp CATTACTGTAGGCAACCTTGTAGGATGCCACAAACTGGACAGAGCCAAAGTTACCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: HYCRQPCRMPQTGQSQSYQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...GTAACTTTGGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCCTACAGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR TCA 72 bp TCACGTACTGAGCCTCCACAGGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGTTCCAGTTACCCACAA +
Preference number: 3 (lower is better)
Translates to: SRTEPPQGSQTG*HAPRFCSSYPQ
Trigger: TTGTGGGTAACTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCCTGTGGAGGCTCAGTACGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR GCA 72 bp TTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGTGAGGACTGGGGGTTA +
Preference number: 3 (lower is better)
Translates to: FPVHPRPTQIPQ*LRKQDSEDWGL
Trigger: TAACCCCCAGTCCTCACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR CCA 72 bp AGGATGGGCGTCTCAAACAAGTTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGGAAGATCTTACTGCTG +
Preference number: 3 (lower is better)
Translates to: RMGVSNKFFLWE*LSQLPGKILLL
Trigger: CAGCAGTAAGATCTTCCCTGGCAACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CCA 72 bp ACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCTGTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: TSWEISSHKPPL*QGFLEQISVCK
Trigger: CTTACACACAGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCCTGGAATGGGCACGCTaGGCTGCTCAGACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRLEWAR*AAQTPR
Trigger: CCGCGGGGTCTGAGCAGCCCAGCGTGCCCATTCCAG...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCACGCGGGCGCTGGAATaGGCACGCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRTRALE*ARWAAQ
Trigger: CTGAGCAGCCCAGCGTGCCCATTCCAGCGCCCGCGT...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGCGGGGACGCGGGCGCTaGAATGGGCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGRGRGR*NGHAGL
Trigger: CAGCCCAGCGTGCCCATTCCAGCGCCCGCGTCCCCG...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCACGGGGCTTAGGGGCTaGGGCAGGGCCCGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ETHAPGIGGPDRGRETTRTGLRG*GRARER
Trigger: CCTCTCACGGGCCCTGCCCCAGCCCCTAAGCCCCGT...GCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTCGGGGACGCGGGCGCTaGAATGGGCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGRGRGR*NGHAGL
Trigger: CAGCCCAGCGTGCCCATTCCAGCGCCCGCGTCCCCG...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCAGAGACACACGCACCTaGGATCGGCGGTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRRDTRT*DRRSGQ
Trigger: CTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCT...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGGGCCACAGCAGTTGTaGCCACATGGTACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRGPQQL*PHGTPG
Trigger: CCCTGGGGTACCATGTGGCCACAACTGCTGTGGCCC...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCCAGGCGCAGGGCGATaGGGTTGTGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWPGAGR*GCARLQ
Trigger: CTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGG...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCACTGGAATGGGCACGCTaGGCTGCTCAGACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPLEWAR*AAQTPR
Trigger: CCGCGGGGTCTGAGCAGCCCAGCGTGCCCATTCCAG...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGACTGGAATGGGCACGCTaGGCTGCTCAGACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGLEWAR*AAQTPR
Trigger: CCGCGGGGTCTGAGCAGCCCAGCGTGCCCATTCCAG...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGACGCGGGCGCTGGAATaGGCACGCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGTRALE*ARWAAQ
Trigger: CTGAGCAGCCCAGCGTGCCCATTCCAGCGCCCGCGT...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCGACTGGCCAAGCGGCTaGCACCCTGCGTCACCACAC +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVIDWPSG*HPASPH
Trigger: GTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTC...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCAAGGGGAAGTGTCTTaGGGACAGGGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PQGRRRADGQEAVISSLAQGEVS*GQGATA
Trigger: TGCTGTGGCCCCCTGTCCCCAAGACACTTCCCCTTG...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGSCWRP*SACQGC
Trigger: GCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCT...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGGGGCAGGGCCCGTaGGAGGTGGAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFLGQGP*EVEGGK
Trigger: TTTCCCACCCTCCACCTCTCACGGGCCCTGCCCCAG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR TCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGCTGGGGCAGGGCCCGTaGGAGGTGGAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVLGQGP*EVEGGK
Trigger: TTTCCCACCCTCCACCTCTCACGGGCCCTGCCCCAG...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp GAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGATGGGCACGCTGGGCTaGTCAGACCCCGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: EKPRGSGPMESRKTWGWQMGTLG*SDPAGF
Trigger: GAACCCCGCGGGGTCTGAGCAGCCCAGCGTGCCCAT...CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAGGCATTGACCATGCCTaGGCGGTTCAGGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGGIDHA*AVQAGQ
Trigger: CTGGCCCGCCTGAACCGCGCAGGCATGGTCAATGCC...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAGGCATTGACCATGCCTaGGCGGTTCAGGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GETETHAPGIGGPDRGREGIDHA*AVQAGQ
Trigger: CTGGCCCGCCTGAACCGCGCAGGCATGGTCAATGCC...TTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTAAGCGGCTGGCACCCTaGGTCACCACACCTGTTACC +
Preference number: 4 (lower is better)
Translates to: PGPTQGRRARGCYLQPGAKRLAP*VTTPVT
Trigger: GGTAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTT...AGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTCCAGGCGCAGGGCGATaGGGTTGTGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPPGAGR*GCARLQ
Trigger: CTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGG...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGCTGGAATGGGCACGCTaGGCTGCTCAGACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRLEWAR*AAQTPR
Trigger: CCGCGGGGTCTGAGCAGCCCAGCGTGCCCATTCCAG...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGACGCGGGCGCTGGAATaGGCACGCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLTRALE*ARWAAQ
Trigger: CTGAGCAGCCCAGCGTGCCCATTCCAGCGCCCGCGT...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGGACTGGCCAAGCGGCTaGCACCCTGCGTCACCACAC +
Preference number: 4 (lower is better)
Translates to: HGTPGPTQGRRARGCYLQDWPSG*HPASPH
Trigger: GTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTC...CTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGTCAGGTACTCATGACTaGCCAAGCGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PQGRRRADGQEAVISSLASGTHD*PSGWHP
Trigger: AGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAGGGCCCGTGAGAGGTaGAGGGTGGGAAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVARARER*RVGKRE
Trigger: CTCCCTCTTTCCCACCCTCCACCTCTCACGGGCCCT...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR TCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCTGGGTGTCCAGGCATTaGCCATGCCTGCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAWVSRH*PCLRGS
Trigger: TGAACCGCGCAGGCATGGTCAATGCCTGGACACCCA...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVISCWRP*SACQGC
Trigger: GCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCT...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGRRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp CCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGIGGPDRGRETTRPTLPPQPRR*SCPACP
Trigger: TGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGG...GGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTACCCATGCCCTCCTCTaGCCTCGCTCCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPTHALL*PRSLSP
Trigger: GGGAGAAAGGGAGCGAGGTCAGAGGAGGGCATGGGT...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGATGGGCACGCTGGGCTaGTCAGACCCCGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGMGTLG*SDPAGF
Trigger: GAACCCCGCGGGGTCTGAGCAGCCCAGCGTGCCCAT...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGGGCATTGACCATGCCTaGGCGGTTCAGGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AEKPRGSGPMESRKTWGWGIDHA*AVQAGQ
Trigger: CTGGCCCGCCTGAACCGCGCAGGCATGGTCAATGCC...CCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTGGCATTGACCATGCCTaGGCGGTTCAGGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALGIDHA*AVQAGQ
Trigger: CTGGCCCGCCTGAACCGCGCAGGCATGGTCAATGCC...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCAGGCGCAGGGCGATaGGGTTGTGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFPGAGR*GCARLQ
Trigger: CTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGGAAGATCTTACTGCTaGCAGTCCTGGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRGRSYC*QSWGPG
Trigger: ACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCC...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCCAGGGAAGATCTTACTaGTGCCAGTCCTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRQGRSY*CQSWGP
Trigger: AGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTG...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGACTGGCCAAGCGGCTaGCACCCTGCGTCACCACAC +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGDWPSG*HPASPH
Trigger: GTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTC...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWRKTWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCT...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAGGGCCACAGCAGTTGTaGCCACATGGTACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GETETHAPGIGGPDRGREGPQQL*PHGTPG
Trigger: CCCTGGGGTACCATGTGGCCACAACTGCTGTGGCCC...TTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCCCCCTTCTGTGTCGCTaGGCTTCAGGACAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVIPLLCR*ASGQGA
Trigger: TGCCCCTTGTCCTGAAGCCCAGCGACACAGAAGGGG...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCCCCTTCTGTGTCGCTaGGCTTCAGGACAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGPLLCR*ASGQGA
Trigger: TGCCCCTTGTCCTGAAGCCCAGCGACACAGAAGGGG...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTCCAGTCCTGGGGTCCTaGTACTCAGTCCAGTTCGCA +
Preference number: 4 (lower is better)
Translates to: PGPTQGRRARGCYLQPGAPVLGS*YSVQFA
Trigger: TGCGAACTGGACTGAGTACCAGGACCCCAGGACTGG...AGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGTGGGTGTCCAGGCATTaGCCATGCCTGCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWWVSRH*PCLRGS
Trigger: TGAACCGCGCAGGCATGGTCAATGCCTGGACACCCA...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGSCWRP*SACQGC
Trigger: GCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCT...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGPQPRR*SCPACP
Trigger: TGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGG...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGACCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGPQPRR*SCPACP
Trigger: TGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGG...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTACCCATGCCCTCCTCTaGCCTCGCTCCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFTHALL*PRSLSP
Trigger: GGGAGAAAGGGAGCGAGGTCAGAGGAGGGCATGGGT...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGAAGCGGCTGGCACCCTaGGTCACCACACCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWKRLAP*VTTPVT
Trigger: GGTAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTT...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAAAGCGGCTGGCACCCTaGGTCACCACACCTGTTACC +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPKRLAP*VTTPVT
Trigger: GGTAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTT...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAAGGGCGATGCGGTTGTaGCAGGCTACAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPRAMRL*QATGRM
Trigger: CATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCT...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAGGGCGATGCGGTTGTaGCAGGCTACAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGRAMRL*QATGRM
Trigger: CATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCT...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCGGGGACGCGGGCGCTaGAATGGGCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPRGRGR*NGHAGL
Trigger: CAGCCCAGCGTGCCCATTCCAGCGCCCGCGTCCCCG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCCGGGGACGCGGGCGCTaGAATGGGCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCRGRGR*NGHAGL
Trigger: CAGCCCAGCGTGCCCATTCCAGCGCCCGCGTCCCCG...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTCGCAGCAGGTTCACCTaGATCCAGGGGTTATCGTCA +
Preference number: 4 (lower is better)
Translates to: PGPTQGRRARGCYLQPGARSRFT*IQGLSS
Trigger: TGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG...AGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGACTGGCCAAGCGGCTaGCACCCTGCGTCACCACAC +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGDWPSG*HPASPH
Trigger: GTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTC...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: PGPTQGRRARGCYLQPGAPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...AGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTGAAAGCAGGAAGACCTaGGGGTGGCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPESRKT*GWQVAT
Trigger: AGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTC...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCGAGGCAGCGGGCCCATaGAAAGCAGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFEAAGP*KAGRPG
Trigger: CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTC...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACACGGGGCTTAGGGGCTaGGGCAGGGCCCGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDTGLRG*GRARER
Trigger: CCTCTCACGGGCCCTGCCCCAGCCCCTAAGCCCCGT...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGAGAGACACACGCACCTaGGATCGGCGGTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVRDTRT*DRRSGQ
Trigger: CTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCT...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGCAGTTGTGGCCACATaGTACCCCAGGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGAVVAT*YPRADA
Trigger: TGCGTCGGCCCTGGGGTACCATGTGGCCACAACTGC...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCGCAGTTGTGGCCACATaGTACCCCAGGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: AVRTGAGKPHALLCPFLSAVVAT*YPRADA
Trigger: TGCGTCGGCCCTGGGGTACCATGTGGCCACAACTGC...GGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGGGGCCACAGCAGTTGTaGCCACATGGTACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLGPQQL*PHGTPG
Trigger: CCCTGGGGTACCATGTGGCCACAACTGCTGTGGCCC...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAAGTTACGGGCCCCCTaGGTGATGATGCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAKLRAP*VMMPVT
Trigger: GGTGACAGGCATCATCACCCAGGGGGCCCGTAACTT...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGTACTGCTGCCAGTCCTaGGGTCCTGGTACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGYCCQS*GPGTQS
Trigger: GGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTA...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCTACTGCTGCCAGTCCTaGGGTCCTGGTACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGYCCQS*GPGTQS
Trigger: GGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTA...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCCTGGGGGTGGCAGGTGGCCCTCAGTGCCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: LSIPDLLRSLSAWGWQVALSAWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGCACTGAG...GGCCACCTGCCACCCCCAGGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR CCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTAGATCCCTCAGTGCCTaGGGGTGGCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALRSLSA*GWQVAT
Trigger: AGTGGCCACCTGCCACCCCCAGGCACTGAGGGATCT...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR TCA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGRGGDL*VGNVPI
Trigger: AATGGGAACATTGCCAACTCACAGATCGCCGCCTCG...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCTTCAGGTACTCATaGCTGGCCAAGCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVAFRYS*LAKRLA
Trigger: TGCCAGCCGCTTGGCCAGTCATGAGTACCTGAAGGC...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGCCTTCAGGTACTCATaGCTGGCCAAGCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGAFRYS*LAKRLA
Trigger: TGCCAGCCGCTTGGCCAGTCATGAGTACCTGAAGGC...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTGCCTTCAGGTACTCATaGCTGGCCAAGCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALAFRYS*LAKRLA
Trigger: TGCCAGCCGCTTGGCCAGTCATGAGTACCTGAAGGC...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGGGCTGTAGGCCACCTTaGAGGCCTTCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWGCRPP*RPSGTH
Trigger: ATGAGTACCTGAAGGCCTTCAAGGTGGCCTACAGCC...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALSCWRP*SACQGC
Trigger: GCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCT...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFRRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGRRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp TCAGGTACTCATGACTGGCCAAGCGGCTGGCACCCTGCGTCACCACACCTGTTACTGGGGCAGGGCCCGTaGGAGGTGGAGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SGTHDWPSGWHPASPHLLLGQGP*EVEGGK
Trigger: TTTCCCACCCTCCACCTCTCACGGGCCCTGCCCCAG...TAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPLPGLS*GHHGNV
Trigger: CACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAG...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCTCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGSGTQC*KPKKVT
Trigger: TGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGA...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GCCAGGCTACAGGCAGGATGCGCACATAGCGAGCCAGGATGGGCGTCTCAAACAGGCATTGACCATGCCTaGGCGGTTCAGGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARLQAGCAHSEPGWASQTGIDHA*AVQAGQ
Trigger: CTGGCCCGCCTGAACCGCGCAGGCATGGTCAATGCC...TGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCAAGCGGCTGGCACCCTaGGTCACCACACCTGTTACC +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSKRLAP*VTTPVT
Trigger: GGTAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTT...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGAGGGCGATGCGGTTGTaGCAGGCTACAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVRAMRL*QATGRM
Trigger: CATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCT...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTACTCAGATCCCTCAGTaGCTGGGGGTGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSTQIPQ*LGVAGG
Trigger: GCCACCTGCCACCCCCAGGCACTGAGGGATCTGAGT...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR CCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGCTGGAATGGGCACGCTaGGCTGCTCAGACCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMLEWAR*AAQTPR
Trigger: CCGCGGGGTCTGAGCAGCCCAGCGTGCCCATTCCAG...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCGGGGACGCGGGCGCTaGAATGGGCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPRGRGR*NGHAGL
Trigger: CAGCCCAGCGTGCCCATTCCAGCGCCCGCGTCCCCG...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCATTCTCCAGGCCCAGTaGCTCGACACATTTCGTCTC +
Preference number: 4 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGILQAQ*LDTFRL
Trigger: GAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAAT...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCCGCAGCAGGTTCACCTaGATCCAGGGGTTATCGTCA +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVIRSRFT*IQGLSS
Trigger: TGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGTCAGGTACTCATGACTaGCCAAGCGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: HGTPGPTQGRRARGCYLQSGTHD*PSGWHP
Trigger: AGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA...CTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGTCAGGCCCAGGGGATTaGCGCATCCGTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EKPRGSGPMESRKTWGWQSGPGD*RIRSAH
Trigger: GTGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGA...CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTCAGGCCCAGGGGATTaGCGCATCCGTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRSGPGD*RIRSAH
Trigger: GTGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGA...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTTCAGGCCCAGGGGATTaGCGCATCCGTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFSGPGD*RIRSAH
Trigger: GTGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGA...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVRKTWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCT...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: LRSQEAAGPWKAGRPGGGRKTWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCT...GCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGAAAGCAGGAAGACCTaGGGGTGGCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGESRKT*GWQVAT
Trigger: AGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTC...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGAGGCAGCGGGCCCATaGAAAGCAGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGEAAGP*KAGRPG
Trigger: CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTC...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CGGGCCAGCTCCGGGACCCAATGCTGCAAACCCAAGAAGGTCACACGCACAGACGAGGCAGCGGGCCCATaGAAAGCAGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: RASSGTQCCKPKKVTRTDEAAGP*KAGRPG
Trigger: CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTC...GTCTGTGCGTGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCTGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTAGAGACACACGCACCTaGGATCGGCGGTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSRDTRT*DRRSGQ
Trigger: CTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCT...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGLLSPA*RFRAFL
Trigger: AAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ETHAPGIGGPDRGRETTRLLSPA*RFRAFL
Trigger: AAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG...GCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCAAGGGGAAGTGTCTTaGGGACAGGGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFQGEVS*GQGATA
Trigger: TGCTGTGGCCCCCTGTCCCCAAGACACTTCCCCTTG...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCCCCTTCTGTGTCGCTaGGCTTCAGGACAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSPLLCR*ASGQGA
Trigger: TGCCCCTTGTCCTGAAGCCCAGCGACACAGAAGGGG...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGCCAGTCCTGGGGTCCTaGTACTCAGTCCAGTTCGCA +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGPVLGS*YSVQFA
Trigger: TGCGAACTGGACTGAGTACCAGGACCCCAGGACTGG...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTTGGGTGTCCAGGCATTaGCCATGCCTGCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSWVSRH*PCLRGS
Trigger: TGAACCGCGCAGGCATGGTCAATGCCTGGACACCCA...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTTGGGTGTCCAGGCATTaGCCATGCCTGCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: IGGPDRGRETTRPTLPFPWVSRH*PCLRGS
Trigger: TGAACCGCGCAGGCATGGTCAATGCCTGGACACCCA...AGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGGGCTGTAGGCCACCTTaGAGGCCTTCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWGCRPP*RPSGTH
Trigger: ATGAGTACCTGAAGGCCTTCAAGGTGGCCTACAGCC...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFLPGLS*GHHGNV
Trigger: CACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp ACACCTGTTACCCACATCCTCCGCAGCAGGTTCACCTGGATCCAGGGGTTATCGATGGGCACGCTGGGCTaGTCAGACCCCGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPVTHILRSRFTWIQGLSMGTLG*SDPAGF
Trigger: GAACCCCGCGGGGTCTGAGCAGCCCAGCGTGCCCAT...CGATAACCCCTGGATCCAGGTGAACCTGCTGCGGAGGATGTGGGTAACAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPSSGTQ*CKPKKV
Trigger: GACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCT...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCCTGGAGGCCGTGATCTaGTTGTCAGGGATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVILEAVI*LSGMLL
Trigger: TAACAGCATCCCTGACAAGCAGATCACGGCCTCCAG...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCTGGAGGCCGTGATCTaGTTGTCAGGGATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVALEAVI*LSGMLL
Trigger: TAACAGCATCCCTGACAAGCAGATCACGGCCTCCAG...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCCTGCTTGTCCAGCCGTaGATAGGAGGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVRTGAGKPHALLCPFLSLLVQP*IGGVPA
Trigger: AGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAG...GGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGCTTGTCCAGCCGTaGATAGGAGGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFLLVQP*IGGVPA
Trigger: AGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALRLQAG*AHSEPG
Trigger: TCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRRLQAG*AHSEPG
Trigger: TCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCGGCAACCTTGTAGGATaGCACAAACTGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAGNLVG*HKLDRA
Trigger: GGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCC...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAACGCGGGCGCTGGAATaGGCACGCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDLKGLRSQEAAGPWKAGTRALE*ARWAAQ
Trigger: CTGAGCAGCCCAGCGTGCCCATTCCAGCGCCCGCGT...TCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTCAGGTACTCATGACTaGCCAAGCGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSSGTHD*PSGWHP
Trigger: AGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: AEKPRGSGPMESRKTWGWRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...CCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGAGGGCCCGTGAGAGGTaGAGGGTGGGAAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWRARER*RVGKRE
Trigger: CTCCCTCTTTCCCACCCTCCACCTCTCACGGGCCCT...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAACGGGGCTTAGGGGCTaGGGCAGGGCCCGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSTGLRG*GRARER
Trigger: CCTCTCACGGGCCCTGCCCCAGCCCCTAAGCCCCGT...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGLLSPA*RFRAFL
Trigger: AAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGCAGTTGTGGCCACATaGTACCCCAGGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPAVVAT*YPRADA
Trigger: TGCGTCGGCCCTGGGGTACCATGTGGCCACAACTGC...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GCCAGGCTACAGGCAGGATGCGCACATAGCGAGCCAGGATGGGCGTCTCAAACAGCAGTTGTGGCCACATaGTACCCCAGGGCCGACGCA +
Preference number: 4 (lower is better)
Translates to: ARLQAGCAHSEPGWASQTAVVAT*YPRADA
Trigger: TGCGTCGGCCCTGGGGTACCATGTGGCCACAACTGC...TGTTTGAGACGCCCATCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGCAAGGGGAAGTGTCTTaGGGACAGGGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGQGEVS*GQGATA
Trigger: TGCTGTGGCCCCCTGTCCCCAAGACACTTCCCCTTG...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCAAGTTACGGGCCCCCTaGGTGATGATGCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSKLRAP*VMMPVT
Trigger: GGTGACAGGCATCATCACCCAGGGGGCCCGTAACTT...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACAAGTTACGGGCCCCCTaGGTGATGATGCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RDRDTRTWDRRSGQGQGNKLRAP*VMMPVT
Trigger: GGTGACAGGCATCATCACCCAGGGGGCCCGTAACTT...GTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTCCAGTCCTGGGGTCCTaGTACTCAGTCCAGTTCGCA +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGPVLGS*YSVQFA
Trigger: TGCGAACTGGACTGAGTACCAGGACCCCAGGACTGG...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCCAGTCCTGGGGTCCTaGTACTCAGTCCAGTTCGCA +
Preference number: 4 (lower is better)
Translates to: GGPDRGRETTRPTLPFPVPVLGS*YSVQFA
Trigger: TGCGAACTGGACTGAGTACCAGGACCCCAGGACTGG...GACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGATTCTCCAGGCCCAGTaGCTCGACACATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EKPRGSGPMESRKTWGWQILQAQ*LDTFQG
Trigger: GCCCTGGAATGTGTCGAGCCACTGGGCCTGGAGAAT...CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542878.5
CDS-3UTR TCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSRGGDL*VGNVPI
Trigger: AATGGGAACATTGCCAACTCACAGATCGCCGCCTCG...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFRGGDL*VGNVPI
Trigger: AATGGGAACATTGCCAACTCACAGATCGCCGCCTCG...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGGGCTGTAGGCCACCTTaGAGGCCTTCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRGCRPP*RPSGTH
Trigger: ATGAGTACCTGAAGGCCTTCAAGGTGGCCTACAGCC...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGACCCATGCCCTCCTCTaGCCTCGCTCCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMTHALL*PRSLSP
Trigger: GGGAGAAAGGGAGCGAGGTCAGAGGAGGGCATGGGT...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACACCCATGCCCTCCTCTaGCCTCGCTCCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDTHALL*PRSLSP
Trigger: GGGAGAAAGGGAGCGAGGTCAGAGGAGGGCATGGGT...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAATGGGCACGCTGGGCTaGTCAGACCCCGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSMGTLG*SDPAGF
Trigger: GAACCCCGCGGGGTCTGAGCAGCCCAGCGTGCCCAT...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGATGGGCACGCTGGGCTaGTCAGACCCCGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVMGTLG*SDPAGF
Trigger: GAACCCCGCGGGGTCTGAGCAGCCCAGCGTGCCCAT...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRSSGTQ*CKPKKV
Trigger: GACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCT...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTAGGGGTTATCGTCATTaGTGCTGGGTGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPRGYRH*CWVSRH
Trigger: ATGCCTGGACACCCAGCAGCAATGACGATAACCCCT...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGTCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQGRRRADGQEAVISSLASNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCCAGGCGCAGGGCGATaGGGTTGTGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPPGAGR*GCARLQ
Trigger: CTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCCAGGCGCAGGGCGATaGGGTTGTGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTPGAGR*GCARLQ
Trigger: CTGTAGCCTGGCACAACCGCATCGCCCTGCGCCTGG...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCCCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: AVRTGAGKPHALLCPFLSPHALL*PFLSIP
Trigger: TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGG...GGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGCCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: EKPRGSGPMESRKTWGWQPHALL*PFLSIP
Trigger: TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGG...CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFPHALL*PFLSIP
Trigger: TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGG...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCGGAAGATCTTACTGCTaGCAGTCCTGGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSGRSYC*QSWGPG
Trigger: ACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCC...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCGGAAGATCTTACTGCTaGCAGTCCTGGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVRTGAGKPHALLCPFLSGRSYC*QSWGPG
Trigger: ACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCC...GGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGCAGGGAAGATCTTACTaGTGCCAGTCCTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVQGRSY*CQSWGP
Trigger: AGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTG...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGCAGGGAAGATCTTACTaGTGCCAGTCCTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRQGRSY*CQSWGP
Trigger: AGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTG...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCAGTGGTTGTCCCAGTTaGCAGGGAAGATCTTACTGC +
Preference number: 4 (lower is better)
Translates to: PGIGGPDRGRETTRPTLPSGCPS*QGRSYC
Trigger: GCAGTAAGATCTTCCCTGGCAACTGGGACAACCACT...GGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCTGTGGCAGGGGTTTTTaGAACAGATATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ETHAPGIGGPDRGRETTRCGRGF*NRYPGR
Trigger: TCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACA...GCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000566497.5
CDS-3UTR CCA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWRRSVS*QCSHSP
Trigger: TGGAGAATGGGAACATTGCCAACTCACAGATCGCCG...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCCTGGGGGTGGCAGGTGGCCCGCAGCAGGTTCACCTaGATCCAGGGGTTATCGTCA +
Preference number: 4 (lower is better)
Translates to: LSIPDLLRSLSAWGWQVARSRFT*IQGLSS
Trigger: TGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG...GGCCACCTGCCACCCCCAGGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR CCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGACTGGCCAAGCGGCTaGCACCCTGCGTCACCACAC +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPDWPSG*HPASPH
Trigger: GTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTC...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: RDRDTRTWDRRSGQGQGNPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...GTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCATTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPFFLWE*LSQLPG
Trigger: CCCTGGCAACTGGGACAACCACTCCCACAAGAAGAA...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGHSEPG*ASQTSS
Trigger: AGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATG...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAHSEPG*ASQTSS
Trigger: AGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATG...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCTGTTATCTCCAGCCTaGCGCTTCCGGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSLLSPA*RFRAFL
Trigger: AAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGGGGCCACAGCAGTTGTaGCCACATGGTACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMGPQQL*PHGTPG
Trigger: CCCTGGGGTACCATGTGGCCACAACTGCTGTGGCCC...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAGGTGTTTCCTCCTTCTaGAAAAGGCCACATCACCCC +
Preference number: 4 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPGVSSF*KRPHHP
Trigger: GGGGTGATGTGGCCTTTTCCAGAAGGAGGAAACACC...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTCGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSRGGDL*VGNVPI
Trigger: AATGGGAACATTGCCAACTCACAGATCGCCGCCTCG...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACGCCTTCAGGTACTCATaGCTGGCCAAGCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDAFRYS*LAKRLA
Trigger: TGCCAGCCGCTTGGCCAGTCATGAGTACCTGAAGGC...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ACGAGGCGGCGATCTGTGAGTTGGCAATGTTCCCATTCTCCAGGCCCAGTGGCTAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRRRSVSWQCSHSPGPVARRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...AGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMRRGSS*RDASPR
Trigger: CCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCT...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTTCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGSPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSSGTQC*KPKKVT
Trigger: TGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGA...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGTCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: EKPRGSGPMESRKTWGWQSGTQC*KPKKVT
Trigger: TGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGA...CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTAGGGGTTATCGTCATTaGTGCTGGGTGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFRGYRH*CWVSRH
Trigger: ATGCCTGGACACCCAGCAGCAATGACGATAACCCCT...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGGGTTATCGTCATTaGTGCTGGGTGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LRSQEAAGPWKAGRPGGGRGYRH*CWVSRH
Trigger: ATGCCTGGACACCCAGCAGCAATGACGATAACCCCT...GCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCTTCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPTQGRRARGCYLQPGASNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...AGCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GDLKGLRSQEAAGPWKAGAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...TCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCTGGAGGCCGTGATCTaGTTGTCAGGGATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: RDRDTRTWDRRSGQGQGNLEAVI*LSGMLL
Trigger: TAACAGCATCCCTGACAAGCAGATCACGGCCTCCAG...GTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGGGCAACCTTGTAGGATaGCACAAACTGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLGNLVG*HKLDRA
Trigger: GGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCC...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCCTGGGGGTGGCAGGTGGCCGGCAACCTTGTAGGATaGCACAAACTGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSIPDLLRSLSAWGWQVAGNLVG*HKLDRA
Trigger: GGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCC...GGCCACCTGCCACCCCCAGGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR GCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGAAGATCTTACTGCTaGCAGTCCTGGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGGRSYC*QSWGPG
Trigger: ACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCC...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTAGTGGTTGTCCCAGTTaGCAGGGAAGATCTTACTGC +
Preference number: 4 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPSGCPS*QGRSYC
Trigger: GCAGTAAGATCTTCCCTGGCAACTGGGACAACCACT...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAG +
Preference number: 4 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAHKPPL*QGFLEQ
Trigger: CTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp GCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGATTCTCCAGGCCCAGTaGCTCGACACATTTCGTCTC +
Preference number: 4 (lower is better)
Translates to: AEKPRGSGPMESRKTWGWILQAQ*LDTFRL
Trigger: GAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAAT...CCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGCGCAGCAGGTTCACCTaGATCCAGGGGTTATCGTCA +
Preference number: 4 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGRSRFT*IQGLSS
Trigger: TGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp TGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCTTCCCGACAGAGCAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: CGWLSIIQAPSQRPSRQSRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...GCTCTGTCGGGAAGGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTTTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGFFLWE*LSQLPG
Trigger: CCCTGGCAACTGGGACAACCACTCCCACAAGAAGAA...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCTTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGPDRGRETTRPTLPFPVFFLWE*LSQLPG
Trigger: CCCTGGCAACTGGGACAACCACTCCCACAAGAAGAA...GACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTTTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFFFLWE*LSQLPG
Trigger: CCCTGGCAACTGGGACAACCACTCCCACAAGAAGAA...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCGAGGCAGCGGGCCCATaGAAAGCAGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FKGAEKPRGSGPMESRKTEAAGP*KAGRPG
Trigger: CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTC...GGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTAGGGCCCGTGAGAGGTaGAGGGTGGGAAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTRARER*RVGKRE
Trigger: CTCCCTCTTTCCCACCCTCCACCTCTCACGGGCCCT...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
3UTR CAA 72 bp GGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCCAGACCTACTCAGATC +
Preference number: 4 (lower is better)
Translates to: GPDRGRETTRPT*PFPVHPRPTQI
Trigger: GATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
3UTR CAA 72 bp AAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: KVTRTDEAAICE*AMFPFSRPSGS
Trigger: CGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
3UTR CAA 72 bp CGCAGCAGGTTCACCTGGATCCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCATTGACCATGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RSRFTWIQGLSS*LLGVQALTMPA
Trigger: CGCAGGCATGGTCAATGCCTGGACACCCAGCAGCAATGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCACGAGGCGGCGATCTGTaGGTTGGCAATGTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPRGGDL*VGNVPI
Trigger: AATGGGAACATTGCCAACTCACAGATCGCCGCCTCG...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCTGGGTGTCCAGGCATTaGCCATGCCTGCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCWVSRH*PCLRGS
Trigger: TGAACCGCGCAGGCATGGTCAATGCCTGGACACCCA...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLGSQTG*HAPRFC
Trigger: ACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCC...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGGSQTG*HAPRFC
Trigger: ACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCC...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp ACACCTGTTACCCACATCCTCCGCAGCAGGTTCACCTGGATCCAGGGGTTATCGAGCTGCTGGAGGCCGTaGTCTGCTTGTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TPVTHILRSRFTWIQGLSSCWRP*SACQGC
Trigger: GCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCT...CGATAACCCCTGGATCCAGGTGAACCTGCTGCGGAGGATGTGGGTAACAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPPQPRR*SCPACP
Trigger: TGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMLPGLS*GHHGNV
Trigger: CACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAG...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTGATAAGCGGCTGGCACCCTaGGTCACCACACCTGTTACC +
Preference number: 4 (lower is better)
Translates to: YLQPGASGPFLRPPWECDKRLAP*VTTPVT
Trigger: GGTAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTT...ATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGCTGCTTGTCCAGCCGTaGATAGGAGGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMLLVQP*IGGVPA
Trigger: AGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAG...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCCTGGGGGAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCPFLSIPDLLRSLSAWGRLQAG*AHSEPG
Trigger: TCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT...CCCCCAGGCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566497.5
CDS-3UTR GCA 90 bp CCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 4 (lower is better)
Translates to: PGIGGPDRGRETTRPTLPTQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...GGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTGTGGCAGGGGTTTTTaGAACAGATATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLCGRGF*NRYPGR
Trigger: TCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACA...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000566497.5
CDS-3UTR CCA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCTGTGGCAGGGGTTTTTaGAACAGATATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFCGRGF*NRYPGR
Trigger: TCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACA...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGTCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAA +
Preference number: 4 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGSPRTS*EISSHK
Trigger: TTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRRRSVS*QCSHSP
Trigger: TGGAGAATGGGAACATTGCCAACTCACAGATCGCCG...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGRRSVS*QCSHSP
Trigger: TGGAGAATGGGAACATTGCCAACTCACAGATCGCCG...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GACAGAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCACCTCCTTCGATCAGGTACTCATGACTaGCCAAGCGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: DRAKVTGPLGDDACHLLRSGTHD*PSGWHP
Trigger: AGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA...TCGAAGGAGGTGACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp TATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTGATTCAGGCCCAGGGGATTaGCGCATCCGTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: YLQPGASGPFLRPPWECDSGPGD*RIRSAH
Trigger: GTGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGA...ATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGCCACATGGTACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GHMVPQGRRRADGQEAVINKFFL*EWLSQL
Trigger: CAACTGGGACAACCACTCCCACAAGAAGAACTTGTT...GATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTACCATGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTCATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WDRRSGQGQGNHTPYFALHSEPG*ASQTSS
Trigger: AGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATG...AAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTAGAGACACACGCACCTaGGATCGGCGGTCCGGACAG +
Preference number: 4 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPRDTRT*DRRSGQ
Trigger: CTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCT...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CAGGGAAGATCTTACTGCTGCCAGTCCTGGGGTCCTGGTACTCAGTCCAGTTCGCAAGGGGAAGTGTCTTaGGGACAGGGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QGRSYCCQSWGPGTQSSSQGEVS*GQGATA
Trigger: TGCTGTGGCCCCCTGTCCCCAAGACACTTCCCCTTG...CGAACTGGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp CGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCAGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RSGQGQGNHTPYFALSCPGSQTG*HAPRFC
Trigger: ACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCC...TGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCACCTCCTTCGAGGAGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: EPKLRAPWVMMPVTSFEEYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...CTCCTCGAAGGAGGTGACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCACCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSPQPRR*SCPACP
Trigger: TGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGG...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp GCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCCTTCCGGGCCTTTCTTaGGGCCACCATGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: AGKPHALLCPFLSIPDLLLPGLS*GHHGNV
Trigger: CACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAG...GAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGAGGGGTTATCGTCATTaGTGCTGGGTGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWRGYRH*CWVSRH
Trigger: ATGCCTGGACACCCAGCAGCAATGACGATAACCCCT...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGTCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWSNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp TGTCTTGCTCTCTCCCCTCACCCCAAGTCATGGTCATCTCATCAGCCTCTAGCTGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CLALSPHPKSWSSHQPLAAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...AGCTAGAGGCTGATGAGATGACCATGACTTGGGGTGAGGGGAGAGAGCAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR GCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCTGCTTGTCCAGCCGTaGATAGGAGGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTLLVQP*IGGVPA
Trigger: AGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAG...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCTGCTTGTCCAGCCGTaGATAGGAGGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPLLVQP*IGGVPA
Trigger: AGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGKPHALLCPFLSIPDLLRLQAG*AHSEPG
Trigger: TCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT...GAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAAGGGCGATGCGGTTGTaGCAGGCTACAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSRAMRL*QATGRM
Trigger: CATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCT...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GAEKPRGSGPMESRKTWGTQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...CCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGCCACACGCCCTACTTTaGCCTTTCCTGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMPHALL*PFLSIP
Trigger: TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGG...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTAGTGGTTGTCCCAGTTaGCAGGGAAGATCTTACTGC +
Preference number: 4 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSSGCPS*QGRSYC
Trigger: GCAGTAAGATCTTCCCTGGCAACTGGGACAACCACT...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCACCAAGTCTGCCTTCCTTaGGTTCAGCTCACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSQRPSRQSSPCLALSPHQVCLP*VQLTAQ
Trigger: CTGGGCTGTGAGCTGAACGCAAGGAAGGCAGACTTG...GTGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR GCA 90 bp CCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCACTCCTCGCCTCAAGTCTaGCTTCCTTGCGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSQRPSRQSSPCLALSPHSSPQV*LPCVQL
Trigger: GAGCTGAACGCAAGGAAGGCAGACTTGAGGCGAGGA...GTGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CCA 90 bp GGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GGPDRGRETTRPTLPFPVHKPPL*QGFLEQ
Trigger: CTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG...GACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGHKPPL*QGFLEQ
Trigger: CTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAATTCTCCAGGCCCAGTaGCTCGACACATTTCGTCTC +
Preference number: 4 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPILQAQ*LDTFRL
Trigger: GAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAAT...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCAGAGTGCAGGCCGTGTaGCAGCTCGTGGGGTACAAT +
Preference number: 4 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCRVQAV*QLVGYN
Trigger: ATTGTACCCCACGAGCTGCCACACGGCCTGCACTCT...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGTCAGGCCCAGGGGATTaGCGCATCCGTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVSGPGD*RIRSAH
Trigger: GTGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGA...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGAAGGAAGACCTGGGGGTaGCAGGTGGCCACTAACAGC +
Preference number: 4 (lower is better)
Translates to: DLKGLRSQEAAGPWKAGRRKTWG*QVATNS
Trigger: GCTGTTAGTGGCCACCTGCCACCCCCAGGTCTTCCT...TCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGAAAGCAGGAAGACCTaGGGGTGGCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSESRKT*GWQVAT
Trigger: AGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTC...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCCCCTTCTGTGTCGCTaGGCTTCAGGACAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPPLLCR*ASGQGA
Trigger: TGCCCCTTGTCCTGAAGCCCAGCGACACAGAAGGGG...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCTACTGCTGCCAGTCCTaGGGTCCTGGTACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGKPHALLCPFLSIPDLLYCCQS*GPGTQS
Trigger: GGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTA...GAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTTACTGCTGCCAGTCCTaGGGTCCTGGTACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTYCCQS*GPGTQS
Trigger: GGACTGAGTACCAGGACCCCAGGACTGGCAGCAGTA...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGCTGTAGGCCACCTTaGAGGCCTTCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPGCRPP*RPSGTH
Trigger: ATGAGTACCTGAAGGCCTTCAAGGTGGCCTACAGCC...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp CTGTTATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSPAWRFRAFLEATMGMYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...CATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp GACAGAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCACCTCCTTCGATCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: DRAKVTGPLGDDACHLLRSGTQC*KPKKVT
Trigger: TGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGA...TCGAAGGAGGTGACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTSSGTQ*CKPKKV
Trigger: GACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCT...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCAGTGGTTGTCCCAGTTaGCAGGGAAGATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCSGCPS*QGRSAA
Trigger: GGCTGCAGATCTTCCCTGGCAACTGGGACAACCACT...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268151.11
CDS-3UTR GCA 90 bp TCAGGTACTCATGACTGGCCAAGCGGCTGGCACCCTGCGTCACCACACCTGTTAGGCAACCTTGTAGGATaGCACAAACTGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGTHDWPSGWHPASPHLLGNLVG*HKLDRA
Trigger: GGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCC...TAACAGGTGTGGTGACGCAGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGAGTGGTTGTCCCAGTTaGCAGGGAAGATCTTACTGC +
Preference number: 4 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWSGCPS*QGRSYC
Trigger: GCAGTAAGATCTTCCCTGGCAACTGGGACAACCACT...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTTCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAA +
Preference number: 4 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFSPRTS*EISSHK
Trigger: TTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCCGCAGCAGGTTCACCTaGATCCAGGGGTTATCGTCA +
Preference number: 4 (lower is better)
Translates to: FKGAEKPRGSGPMESRKTRSRFT*IQGLSS
Trigger: TGACGATAACCCCTGGATCCAGGTGAACCTGCTGCG...GGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGATCAGGTACTCATGACTaGCCAAGCGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: DLKGLRSQEAAGPWKAGRSGTHD*PSGWHP
Trigger: AGGGTGCCAGCCGCTTGGCCAGTCATGAGTACCTGA...TCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGNKFFL*EWLSQL
Trigger: CAACTGGGACAACCACTCCCACAAGAAGAACTTGTT...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CCAGGTCTTGTAGCTGCTGGAGGCCGTGATCTGCTTGTCAGGGATGCTGTTATTGAAAGCAGGAAGACCTaGGGGTGGCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: PGLVAAGGRDLLVRDAVIESRKT*GWQVAT
Trigger: AGTGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTC...AATAACAGCATCCCTGACAAGCAGATCACGGCCTCCAGCAGCTACAAGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp GATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGAAAGTTACGGGCCCCCTaGGTGATGATGCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: DLKGLRSQEAAGPWKAGRKLRAP*VMMPVT
Trigger: GGTGACAGGCATCATCACCCAGGGGGCCCGTAACTT...TCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR TCA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTGGCTGTAGGCCACCTTaGAGGCCTTCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPGCRPP*RPSGTH
Trigger: ATGAGTACCTGAAGGCCTTCAAGGTGGCCTACAGCC...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp CCCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCAGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PQSKAFPTEQSLSCSLPSGSQTG*HAPRFC
Trigger: ACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCC...TGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR TCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTTCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPSPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR TCA 90 bp TATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTGATTCCCCAGCCCTATGGTaGTTTAAAGGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLQPGASGPFLRPPWECDSPALW*FKGAEK
Trigger: CTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGA...ATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTTCCGGGACCCAATGCTaGAAACCCAAGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTSGTQC*KPKKVT
Trigger: TGTGACCTTCTTGGGTTTGCAGCATTGGGTCCCGGA...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPSSGTQ*CKPKKV
Trigger: GACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCT...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTAGGGGTTATCGTCATTaGTGCTGGGTGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPRGYRH*CWVSRH
Trigger: ATGCCTGGACACCCAGCAGCAATGACGATAACCCCT...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCTGGAGGCCGTGATCTaGTTGTCAGGGATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPLEAVI*LSGMLL
Trigger: TAACAGCATCCCTGACAAGCAGATCACGGCCTCCAG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp GCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTTCGTCTCACAGTGGCAGGGAAGATCTTACTaGTGCCAGTCCTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AMFPFSRPSGSTHFVSQWQGRSY*CQSWGP
Trigger: AGGACCCCAGGACTGGCAGCAGTAAGATCTTCCCTG...CCACTGTGAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp GGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGATTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDLKGLRSQEAAGPWKAGFFLWE*LSQLPG
Trigger: CCCTGGCAACTGGGACAACCACTCCCACAAGAAGAA...TCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp CGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCAAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RSGQGQGNHTPYFALSCPNKFFL*EWLSQL
Trigger: CAACTGGGACAACCACTCCCACAAGAAGAACTTGTT...TGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTGTGGCAGGGGTTTTTaGAACAGATATCTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SAVRTGAGKPHALLCPFLCGRGF*NRYLCV
Trigger: TACACACAGATATCTGTTCCAAAAACCCCTGCCACA...CAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR TCA 90 bp GCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCGGGTCTCAAACAGGTTaGCATGCACCGCGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: AGKPHALLCPFLSIPDLLGSQTG*HAPRFC
Trigger: ACAAAAACGCGGTGCATGTCAACCTGTTTGAGACCC...GAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCATACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGTCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWSNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR GCA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCTGGAGGCCGTGATCTaGTTGTCAGGGATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVLEAVI*LSGMLL
Trigger: TAACAGCATCCCTGACAAGCAGATCACGGCCTCCAG...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp GAGCCAAAGTTACGGGCCCCCTGGGTGATGATGCCTGTCACCTCCTTCGAGGAGTCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAA +
Preference number: 4 (lower is better)
Translates to: EPKLRAPWVMMPVTSFEESPRTS*EISSHK
Trigger: TTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA...CTCCTCGAAGGAGGTGACAGGCATCATCACCCAGGGGGCCCGTAACTTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp GATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGAATTCTCCAGGCCCAGTaGCTCGACACATTTCGTCTC +
Preference number: 4 (lower is better)
Translates to: DLKGLRSQEAAGPWKAGRILQAQ*LDTFRL
Trigger: GAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAAT...TCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR CCA 90 bp TTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKGLRSQEAAGPWKAGRPRRSVS*QCSHSP
Trigger: TGGAGAATGGGAACATTGCCAACTCACAGATCGCCG...AGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWNKFFL*EWLSQL
Trigger: CAACTGGGACAACCACTCCCACAAGAAGAACTTGTT...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CCA 90 bp GCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCCATAGCGAGCCAGGATaGGCGTCTCAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGKPHALLCPFLSIPDLLHSEPG*ASQTSS
Trigger: AGAACTTGTTTGAGACGCCCATCCTGGCTCGCTATG...GAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp CCCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCATCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQSKAFPTEQSLSCSLPSSNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...TGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR GCA 90 bp AACAGGTTGACATGCACCGCGTTTTTGTTCCAGTTACCCACAAACTCCTTGTGTGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: NRLTCTAFLFQLPTNSLCAQSAE*RPCGSS
Trigger: CGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGC...ACACAAGGAGTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGTCAACCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp CCCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCAATTCCTTGCCTGCAGTaGTCTTTTTGCAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PQSKAFPTEQSLSCSLPSIPCLQ*SFCSAV
Trigger: AACAGCACTGCAAAAAGAGCACTGCAGGCAAGGAAT...TGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CCA 90 bp TATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTGATCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAG +
Preference number: 4 (lower is better)
Translates to: YLQPGASGPFLRPPWECDHKPPL*QGFLEQ
Trigger: CTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG...ATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp AAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTTGGCAATGTTCCCATTCCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVTRTDEAAICELAMFPFRRSVS*QCSHSP
Trigger: TGGAGAATGGGAACATTGCCAACTCACAGATCGCCG...GAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCTCAAACAGGTTGACATaGACCGCGTTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCSNRLT*TAFLFQ
Trigger: CTGGAACAAAAACGCGGTGCATGTCAACCTGTTTGA...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR GCA 90 bp AACAGGTTGACATGCACCGCGTTTTTGTTCCAGTTACCCACAAACTCCTTGTGTAGGGCGATGCGGTTGTaGCAGGCTACAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: NRLTCTAFLFQLPTNSLCRAMRL*QATGRM
Trigger: CATCCTGCCTGTAGCCTGGCACAACCGCATCGCCCT...ACACAAGGAGTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGTCAACCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp TTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCACTCAGATCCCTCAGTaGCTAAGAAAACAGGACAGT +
Preference number: 4 (lower is better)
Translates to: FKGAEKPRGSGPMESRKTTQIPQ*LRKQDS
Trigger: ACTGTCCTGTTTTCTTAGGCACTGAGGGATCTGAGT...GGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
CDS-3UTR GCA 90 bp TTTAAGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCCTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FKFFMWLALHHSGPQSKALLSVI*SSPQVC
Trigger: GCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAG...GGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTTCTCCTCGCACTTCTTaGGAAATCTCCTCGCATAAA +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTSPRTS*EISSHK
Trigger: TTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CCA 90 bp TTTAAGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCCCGTGTGGCAGCTCGTaGGGTACAATCTCACGTACT +
Preference number: 4 (lower is better)
Translates to: FKFFMWLALHHSGPQSKAPCGSS*GTISRT
Trigger: AGTACGTGAGATTGTACCCCACGAGCTGCCACACGG...GGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CCA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTNKFFL*EWLSQL
Trigger: CAACTGGGACAACCACTCCCACAAGAAGAACTTGTT...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR TCA 90 bp TTTAAGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCTACAATCTCACGTACTaGGCCTCCACAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FKFFMWLALHHSGPQSKAYNLTY*ASTGVS
Trigger: TGAGACCCCTGTGGAGGCTCAGTACGTGAGATTGTA...GGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR GCA 90 bp AACAGGTTGACATGCACCGCGTTTTTGTTCCAGTTACCCACAAACTCCTTGTGTAGCTCCGGGACCCAATaGTGCAAACCCAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NRLTCTAFLFQLPTNSLCSSGTQ*CKPKKV
Trigger: GACCTTCTTGGGTTTGCAGCATTGGGTCCCGGAGCT...ACACAAGGAGTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGTCAACCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CCA 90 bp TTTAAGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCCCTCACCCCAAGTCATaGTCATCTCATCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FKFFMWLALHHSGPQSKAPHPKS*SSHQPL
Trigger: TAGAGGCTGATGAGATGACCATGACTTGGGGTGAGG...GGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000613965.1
3UTR CAA 72 bp CGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RTSWEISSHKPP*WQGFLEQISVC
Trigger: ACACACAGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR GCA 90 bp GGGTTTTTGGAACAGATATCTGTGTGTAAGATAGGTATGGTGTTTCCTCCTTCTAGGCTACAGGCAGGATaGGCACATAGCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GFLEQISVCKIGMVFPPSRLQAG*AHSEPG
Trigger: TCCTGGCTCGCTATGTGCGCATCCTGCCTGTAGCCT...AGAAGGAGGAAACACCATACCTATCTTACACACAGATATCTGTTCCAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS CCA 90 bp CCAGAGGAGGGAATATTTGAGCTGGGTCCAGGGCGACGAGGAGGCTaGGGGCGCAGAGCAGCGCGCCGCACAGCGCGGCCAGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: PEEGIFELGPGRRGG*GRRAARRTARPAGG
Trigger: CCCGCCTGCTGGCCGCGCTGTGCGGCGCGCTGCTCTGCGCCCCCAGCCTCCTCGTCGCCCTGGACCCAGCTCAAATATTCCCTCCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS-3UTR CAA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGCAGGGCGATGCGGTaGTGCCAGGCTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PQGRRRADGQEAVISSLARRAMR*CQATGR
Trigger: CCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCG...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCCGCAGGGCGATGCGGTaGTGCCAGGCTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGRRAMR*CQATGR
Trigger: CCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCG...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCCCGCAACCCAGGCGTaGAAGTTGCCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PQGRRRADGQEAVISSLAPATQA*KLPCLS
Trigger: GGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGG...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCGCAGGGCGATGCGGTaGTGCCAGGCTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGRRAMR*CQATGR
Trigger: CCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCG...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCACCCAGGCGTTGAAGTaGCCCTGCTTGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRTQALK*PCLSSR
Trigger: ACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGT...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCTGGGTGTCCAGGCATaGACCATGCCTGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGLGVQA*TMPARF
Trigger: GAACCGCGCAGGCATGGTCAATGCCTGGACACCCAG...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCCGCAACCCAGGCGTaGAAGTTGCCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGPATQA*KLPCLS
Trigger: GGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGG...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGCTTCCGGGCCTTTCTaGAGGCCACCATGGGAATGT +
Preference number: 5 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRASGPF*RPPWEC
Trigger: ACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGC...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PRADAGPTGKRLLSPAWRAAICE*AMFPFS
Trigger: GGAGAATGGGAACATTGCCAACTCACAGATCGCCGC...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGACTGGGTGTCCAGGCATaGACCATGCCTGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RRDRDTRTWDRRSGQGQGLGVQA*TMPARF
Trigger: GAACCGCGCAGGCATGGTCAATGCCTGGACACCCAG...TCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCGCAACCCAGGCGTaGAAGTTGCCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SQEAAGPWKAGRPGGGRWPATQA*KLPCLS
Trigger: GGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGG...CCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTCCCGCAACCCAGGCGTaGAAGTTGCCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPPATQA*KLPCLS
Trigger: GGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGG...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCC +
Preference number: 5 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGTTRPT*PFPVHP
Trigger: GGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCTGGGTGTCCAGGCATaGACCATGCCTGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFLGVQA*TMPARF
Trigger: GAACCGCGCAGGCATGGTCAATGCCTGGACACCCAG...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGCTGGGTGTCCAGGCATaGACCATGCCTGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRLGVQA*TMPARF
Trigger: GAACCGCGCAGGCATGGTCAATGCCTGGACACCCAG...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTCTGGGTGTCCAGGCATaGACCATGCCTGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGLGVQA*TMPARF
Trigger: GAACCGCGCAGGCATGGTCAATGCCTGGACACCCAG...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PGIGGPDRGRETTRPTLPQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...GGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ETHAPGIGGPDRGRETTRQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...GCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCAGGCCCAGGGGATaGGCGCATCCGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPFRPRG*AHPFSS
Trigger: TGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGAA...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCCGCAACCCAGGCGTaGAAGTTGCCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFPATQA*KLPCLS
Trigger: GGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGG...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCAGGGGGCCACAGCAGTaGTGGCCACATGGTACCCCA +
Preference number: 5 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSRGPQQ*WPHGTP
Trigger: TGGGGTACCATGTGGCCACAACTGCTGTGGCCCCCT...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGCGAGTGGTTGTCCCAGTaGCCAGGGAAGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: PRADAGPTGKRLLSPAWREWLSQ*PGKILL
Trigger: CAGTAAGATCTTCCCTGGCAACTGGGACAACCACTC...GCGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS CCA 90 bp CTCTCCCAGGGTGGGGAGCATCTGGTAGCTGCAGACAGGTCCCTCTaGCTGAAATGCAGAAATCCCACCAGGGCGACGAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSQGGEHLVAADRSL*LKCRNPTRATRRLG
Trigger: CCCCAGCCTCCTCGTCGCCCTGGTGGGATTTCTGCATTTCAGCCAGAGGGACCTGTCTGCAGCTACCAGATGCTCCCCACCCTGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557944.1
CDS-3UTR CAA 90 bp ACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCTTGTGGCAGGGGTTTTaGGAACAGATATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: TPGPTQGRRARGCYLQPGLWQGF*EQISRA
Trigger: CGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAA...GCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000566497.5
CDS-3UTR CAA 90 bp TACCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: YPRADAGPTGKRLLSPAWAAICE*AMFPFS
Trigger: GGAGAATGGGAACATTGCCAACTCACAGATCGCCGC...CCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: PGIGGPDRGRETTRPTLPAAICE*AMFPFS
Trigger: GGAGAATGGGAACATTGCCAACTCACAGATCGCCGC...GGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCTTCAGGCCCAGGGGATaGGCGCATCCGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LRSQEAAGPWKAGRPGGGFRPRG*AHPFSS
Trigger: TGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGAA...GCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTTTCAGGCCCAGGGGATaGGCGCATCCGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGFRPRG*AHPFSS
Trigger: TGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGAA...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GCTCACAGCCCAGTAGCTCAAAGCGCAGAGTGCAGGCCGTGTGGCAGCTCGTGGTTCAGGCCCAGGGGATaGGCGCATCCGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AHSPVAQSAECRPCGSSWFRPRG*AHPFSS
Trigger: TGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGAA...CCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCTGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CAA 90 bp GCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGACCCAGGCGTTGAAGTaGCCCTGCTTGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: AEKPRGSGPMESRKTWGWTQALK*PCLSSR
Trigger: ACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGT...CCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTAGGGGGCCACAGCAGTaGTGGCCACATGGTACCCCA +
Preference number: 5 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSRGPQQ*WPHGTP
Trigger: TGGGGTACCATGTGGCCACAACTGCTGTGGCCCCCT...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS GCA 90 bp GCCCCTGTCATGCTCTTGGGCAACAGAAAGCAGCTCCATCCGCCTTaGAGGGCCAACTGTGCGACCTTCTCACTGCCGACCCCACCACCT +
Preference number: 5 (lower is better)
Translates to: APVMLLGNRKQLHPP*RANCATFSLPTPPP
Trigger: AGGTGGTGGGGTCGGCAGTGAGAAGGTCGCACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAGAGCATGACAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CCA 90 bp TGGGTCATGGGTTGGCAGACAGCAAACACCTGGGTGGGGCTGCTATaGCCAGGTGACCCCCTAGAGTGCGTTGCCCGAGTGAAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: WVMGWQTANTWVGLL*PGDPLECVARVKPG
Trigger: ACCAGGCTTCACTCGGGCAACGCACTCTAGGGGGTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS-3UTR CAA 90 bp GGGGCTAGGAGAGACAGAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GARRDRDTRTWDRRSGQGGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...CCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTCTGTCTCTCCTAGCCCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp ATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTTTCAGGCCCAGGGGATaGGCGCATCCGTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: IGGPDRGRETTRPTLPFPFRPRG*AHPFSS
Trigger: TGAGCTGAACGGATGCGCCAATCCCCTGGGCCTGAA...AGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCGAGGCCGTGATCTGCTaGTCAGGGATGCTGTTATTC +
Preference number: 5 (lower is better)
Translates to: PRGSGPMESRKTWGWQVAEAVIC*SGMLLF
Trigger: GAATAACAGCATCCCTGACAAGCAGATCACGGCCTC...GGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CCCCAGGGCCGACGCAGGGCCGACGGGCAAGAGGCTGTTATCTCCAGCCTGGCGTCAAACAAGTTCTTCTaGTGGGAGTGGTTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PQGRRRADGQEAVISSLASNKFF*WEWLSQ
Trigger: CTGGGACAACCACTCCCACAAGAAGAACTTGTTTGA...CGCCAGGCTGGAGATAACAGCCTCTTGCCCGTCGGCCCTGCGTCGGCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGACGCAGGGCGATGCGGTaGTGCCAGGCTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GDLKGLRSQEAAGPWKAGRRAMR*CQATGR
Trigger: CCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCG...TCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCGCTTCCGGGCCTTTCTaGAGGCCACCATGGGAATGT +
Preference number: 5 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSASGPF*RPPWEC
Trigger: ACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGC...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAAGGGGGCCACAGCAGTaGTGGCCACATGGTACCCCA +
Preference number: 5 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPRGPQQ*WPHGTP
Trigger: TGGGGTACCATGTGGCCACAACTGCTGTGGCCCCCT...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GAGACACACGCACCTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCGAGTGGTTGTCCCAGTaGCCAGGGAAGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: ETHAPGIGGPDRGRETTREWLSQ*PGKILL
Trigger: CAGTAAGATCTTCCCTGGCAACTGGGACAACCACTC...GCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAGGTGCGTGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000558018.5
ENST00000566497.5
CDS TCA 90 bp TCTGCAGCCACTGATCGTTACCGTAGCTCCCCGCAACCCAGGCGTTaGAGTTGCCCTGCTTGTCCAGCCGTGCATAGGAGGGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SAATDRYRSSPQPRR*SCPACPAVHRRGSS
Trigger: GCTGGAACCCCTCCTATGCACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGTTGCGGGGAGCTACGGTAACGATCAGTGGCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268151.11
CDS GCA 90 bp CTTGGGCAACAGAAAGCAGCTCCATCCGCCTTGCAGGGCCAACTGTaGGACCTTCTCACTGCCGACCCCACCACCTCCTCACCTCAACCA +
Preference number: 5 (lower is better)
Translates to: LGQQKAAPSALQGQL*DLLTADPTTSSPQP
Trigger: TGGTTGAGGTGAGGAGGTGGTGGGGTCGGCAGTGAGAAGGTCGCACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS GCA 90 bp CCCAGGTACCCCCAGACCTCAGCCCCACCCACACACATGCACACGTaGACACATGCACACATGCACCAACACTCTCCAGCCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: PRYPQTSAPPTHMHT*THAHMHQHSPADWK
Trigger: CTTCCAGTCGGCTGGAGAGTGTTGGTGCATGTGTGCATGTGTGCACGTGTGCATGTGTGTGGGTGGGGCTGAGGTCTGGGGGTACCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 90 bp CTGGGGATGCTGTCACACAGGCCTGTGAGGGCTGGCCCGGGAAGCTaGCCTTTGTTTCACTCAGCCCTGCCCCAAACACTCAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: LGMLSHRPVRAGPGS*PLFHSALPQTLRNV
Trigger: CACATTCCTGAGTGTTTGGGGCAGGGCTGAGTGAAACAAAGGCCAGCTTCCCGGGCCAGCCCTCACAGGCCTGTGTGACAGCATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS-3UTR CAA 90 bp AAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: KPRGSGPMESRKTWGWQVAAICE*AMFPFS
Trigger: GGAGAATGGGAACATTGCCAACTCACAGATCGCCGC...CACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCCAGAGGCCGTGATCTGCTaGTCAGGGATGCTGTTATTC +
Preference number: 5 (lower is better)
Translates to: QEAAGPWKAGRPGGGRWPEAVIC*SGMLLF
Trigger: GAATAACAGCATCCCTGACAAGCAGATCACGGCCTC...TGGCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAACCCAGGCGTTGAAGTaGCCCTGCTTGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPTQALK*PCLSSR
Trigger: ACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGT...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AAAGCCAGCATAGAGGGCCCCAAACGCCCACCCTGCCAACCCATGCCCTCCTCTACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCC +
Preference number: 5 (lower is better)
Translates to: KASIEGPKRPPCQPMPSSTTRPT*PFPVHP
Trigger: GGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT...AGAGGAGGGCATGGGTTGGCAGGGTGGGCGTTTGGGGCCCTCTATGCTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS TCA 90 bp TGCGGGATGAAGAAGGCTGAAAAGGCCCATGTGCAGACATGCCGCTaGGCTCTCCCAGGGTGGGGAGCATCTGGTAGCTGCAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: CGMKKAEKAHVQTCR*ALPGWGASGSCRQV
Trigger: GACCTGTCTGCAGCTACCAGATGCTCCCCACCCTGGGAGAGCTCAGCGGCATGTCTGCACATGGGCCTTTTCAGCCTTCTTCATCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557944.1
CDS TCA 90 bp GCCCAGCTTTCCAAGTGGCCTGGGAGTGTCCAGAAAAGTGCTGGCTaGCAATGGCAGTGGTGCTGGGGACCACTGCCCACTGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: AQLSKWPGSVQKSAG*QWQWCWGPLPTGGR
Trigger: TCTTCCACCAGTGGGCAGTGGTCCCCAGCACCACTGCCATTGTCAGCCAGCACTTTTCTGGACACTCCCAGGCCACTTGGAAAGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS GCA 90 bp TGTGGAATCCCAGGTACCCCCAGACCTCAGCCCCACCCACACACATaGACACGTGCACACATGCACACATGCACCAACACTCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: CGIPGTPRPQPHPHT*TRAHMHTCTNTLQP
Trigger: CGGCTGGAGAGTGTTGGTGCATGTGTGCATGTGTGCACGTGTGCATGTGTGTGGGTGGGGCTGAGGTCTGGGGGTACCTGGGATTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 90 bp TCAATCAGAATGCCCTGGGTCATGGGTTGGCAGACAGCAAACACCTaGGTGGGGCTGCTATGGCCAGGTGACCCCCTAGAGTGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: SIRMPWVMGWQTANT*VGLLWPGDPLECVA
Trigger: GGCAACGCACTCTAGGGGGTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS-3UTR CAA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGAAICE*AMFPFS
Trigger: GGAGAATGGGAACATTGCCAACTCACAGATCGCCGC...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: AVRTGAGKPHALLCPFLSGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...GGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GIGGPDRGRETTRPTLPFGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...AAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCGAGGCCGTGATCTGCTaGTCAGGGATGCTGTTATTC +
Preference number: 5 (lower is better)
Translates to: GSAVRTGAGKPHALLCPFEAVIC*SGMLLF
Trigger: GAATAACAGCATCCCTGACAAGCAGATCACGGCCTC...GAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGGCTCAAACAAGTTCTTCTaGTGGGAGTGGTTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: AKRQRAHGKQEDLGVAGGSNKFF*WEWLSQ
Trigger: CTGGGACAACCACTCCCACAAGAAGAACTTGTTTGA...GCCACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTGAGTGGTTGTCCCAGTaGCCAGGGAAGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: EAKRQRAHGKQEDLGVAGEWLSQ*PGKILL
Trigger: CAGTAAGATCTTCCCTGGCAACTGGGACAACCACTC...ACCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp TGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCTTCCCGACAGAGCAGAGAGCAGTCCTTGTCTaGCTCTCTCCCCTCACCCCA +
Preference number: 5 (lower is better)
Translates to: WLALHHSGPQSKAFPTEQRAVLV*LSPLTP
Trigger: TGGGGTGAGGGGAGAGAGCAAGACAAGGACTGCTCT...CTGCTCTGTCGGGAAGGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS TCA 90 bp CTGGATCTGGGATCCACAGCTCCCAGGGGCAGGAGCACAAGGCGATaGAGCAGAAAGAACTCTGTGGATCCTGACCAGCCCCTGTCATGC +
Preference number: 5 (lower is better)
Translates to: LDLGSTAPRGRSTRR*SRKNSVDPDQPLSC
Trigger: GCATGACAGGGGCTGGTCAGGATCCACAGAGTTCTTTCTGCTTCATCGCCTTGTGCTCCTGCCCCTGGGAGCTGTGGATCCCAGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS GCA 90 bp GGAGGGCCAATGACCATGCTAGGCCCCCGAGACAGAGAAATCAGATaGAGCGCAGGCCTCAAGAAGCCAAGGGGAAAGAGGCCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GGPMTMLGPRDREIR*SAGLKKPRGKRPAS
Trigger: ACTTGCTGGCCTCTTTCCCCTTGGCTTCTTGAGGCCTGCGCTGCATCTGATTTCTCTGTCTCGGGGGCCTAGCATGGTCATTGGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS GCA 90 bp AGCACTCACCGTTCAGCTCACAGCCCAGTAGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCGTGGGGTACAATCTCACGTACTGAG +
Preference number: 5 (lower is better)
Translates to: STHRSAHSPVAQSAE*RPCGSSWGTISRTE
Trigger: CTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCTGTGAGCTGAACGGTGAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS GCA 90 bp CCTTCCTTGCGTTCAGCTCACAGCCCAGTAGCTCAAAGCGCAGAGTaGAGGCCGTGTGGCAGCTCGTGGGGTACAATCTCACGTACTGAG +
Preference number: 5 (lower is better)
Translates to: PSLRSAHSPVAQSAE*RPCGSSWGTISRTE
Trigger: CTCAGTACGTGAGATTGTACCCCACGAGCTGCCACACGGCCTGCACTCTGCGCTTTGAGCTACTGGGCTGTGAGCTGAACGCAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS CCA 90 bp ACACTCAAATGTTCTGGGGATGCTGTCACACAGGCCTGTGAGGGCTaGCCCGGGAAGCTGGCCTTTGTTTCACTCAGCCCTGCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: TLKCSGDAVTQACEG*PGKLAFVSLSPAPN
Trigger: GTTTGGGGCAGGGCTGAGTGAAACAAAGGCCAGCTTCCCGGGCCAGCCCTCACAGGCCTGTGTGACAGCATCCCCAGAACATTTGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS-3UTR CAA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGTTGTGGCAGGGGTTTTaGGAACAGATATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGLWQGF*EQISRA
Trigger: CGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAA...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268150.13
ENST00000268151.11
CDS-3UTR CAA 90 bp ATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTTTGTGGCAGGGGTTTTaGGAACAGATATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: IGGPDRGRETTRPTLPFPLWQGF*EQISRA
Trigger: CGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAA...AGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000566497.5
CDS-3UTR CAA 90 bp CTGGGATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTACATGCACCGCGTTTTaGTTCCAGTTACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: LGSAVRTGAGKPHALLCPTCTAF*FQLPTN
Trigger: GTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGT...AGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTACCCAGGCGTTGAAGTaGCCCTGCTTGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTTQALK*PCLSSR
Trigger: ACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGT...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp ACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGAGGGGGCCACAGCAGTaGTGGCCACATGGTACCCCA +
Preference number: 5 (lower is better)
Translates to: TPYFALSCPSQTYSDPSVRGPQQ*WPHGTP
Trigger: TGGGGTACCATGTGGCCACAACTGCTGTGGCCCCCT...CACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS TCA 90 bp CATTATCTCTTCCTCTCCCTCTTCCCCCGTGTGCTGGATGGAGCCTaGGTCCGCCTAGAGCCAAGGAAGTCCATGTGTAGGCGAATCGGC +
Preference number: 5 (lower is better)
Translates to: HYLFLSLFPRVLDGA*VRLEPRKSMCRRIG
Trigger: GCCGATTCGCCTACACATGGACTTCCTTGGCTCTAGGCGGACTCAGGCTCCATCCAGCACACGGGGGAAGAGGGAGAGGAAGAGATAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559143.1
ENST00000559770.1
CDS CCA 90 bp GTCTGCATTTCTAAGAAGCTCCTAGGTGATGACACTGCGGGTCCCTaGGGCTCTTCACCCACCAAGCTGCCCCTCCATCTCTTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: VCISKKLLGDDTAGP*GSSPTKLPLHLLAP
Trigger: TGGAGCCAAGAGATGGAGGGGCAGCTTGGTGGGTGAAGAGCCCCAGGGACCCGCAGTGTCATCACCTAGGAGCTTCTTAGAAATGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS-3UTR CAA 90 bp GGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTACATGCACCGCGTTTTaGTTCCAGTTACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: GLRSQEAAGPWKAGRPGGTCTAF*FQLPTN
Trigger: GTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGT...ACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGAGGCCGTGATCTGCTaGTCAGGGATGCTGTTATTC +
Preference number: 5 (lower is better)
Translates to: RTGAGKPHALLCPFLSIPEAVIC*SGMLLF
Trigger: GAATAACAGCATCCCTGACAAGCAGATCACGGCCTC...TGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGAACCCAGGCGTTGAAGTaGCCCTGCTTGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: DLKGLRSQEAAGPWKAGRTQALK*PCLSSR
Trigger: ACGGCTGGACAAGCAGGGCAACTTCAACGCCTGGGT...TCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTGAGTGGTTGTCCCAGTaGCCAGGGAAGATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTEWLSQ*PGKICS
Trigger: GCTGCAGATCTTCCCTGGCAACTGGGACAACCACTC...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268151.11
CDS-3UTR CAA 90 bp AGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGCAGGTCAAACAAGTTCTTCTaGTGGGAGTGGTTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RSQEAAGPWKAGRPGGGRSNKFF*WEWLSQ
Trigger: CTGGGACAACCACTCCCACAAGAAGAACTTGTTTGA...CCTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGTGCACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCC +
Preference number: 5 (lower is better)
Translates to: RPTLPFPVHPRPTQIPQCTTRPT*PFPVHP
Trigger: GGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT...GCACTGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp TATCTCCAGCCTGGCGCTTCCGGGCCTTTCTTGAGGCCACCATGGGAATGTGATACCACACGCCCTACTTaGCCCTTTCCTGTCCATCCC +
Preference number: 5 (lower is better)
Translates to: YLQPGASGPFLRPPWECDTTRPT*PFPVHP
Trigger: GGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT...ATCACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGCGCCAGGCTGGAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS TCA 90 bp GACTTTCAGGCAGGGGCAGTGGAAGGAAGCATTGTTCTGGCCCATTaGGCAGGTTCCGCCCACCAATTCAGGCACAGGTTGCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: DFQAGAVEGSIVLAH*AGSAHQFRHRLQSQ
Trigger: CTGTGACTGCAACCTGTGCCTGAATTGGTGGGCGGAACCTGCTCAATGGGCCAGAACAATGCTTCCTTCCACTGCCCCTGCCTGAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS TCA 90 bp GTACCTGGGCTTCCTTGGTTTGCAAGACTCACCCTCTCTTGGCCCTaGGCAGGGGCCAGTCATGCCTGGATACAGGCAACTTTAATGGCC +
Preference number: 5 (lower is better)
Translates to: VPGLPWFARLTLSWP*AGASHAWIQATLMA
Trigger: GGCCATTAAAGTTGCCTGTATCCAGGCATGACTGGCCCCTGCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 90 bp AACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTTaGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTCCA +
Preference number: 5 (lower is better)
Translates to: NPRRSHAQTRRRSVS*QCSHSPGPVARHIP
Trigger: TGGAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542878.5
ENST00000558352.5
ENST00000559997.5
CDS CCA 90 bp AGCAGAAAGAACTCTGTGGATCCTGACCAGCCCCTGTCATGCTCTTaGGCAACAGAAAGCAGCTCCATCCGCCTTGCAGGGCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: SRKNSVDPDQPLSCS*ATESSSIRLAGPTV
Trigger: CACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAGAGCATGACAGGGGCTGGTCAGGATCCACAGAGTTCTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS-3UTR CAA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGGGGTTATCGTCATaGCTGCTGGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPQGLSS*LLGVQA
Trigger: TGCCTGGACACCCAGCAGCAATGACGATAACCCCTG...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGTCAAACAAGTTCTTCTaGTGGGAGTGGTTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: KGLRSQEAAGPWKAGRPGSNKFF*WEWLSQ
Trigger: CTGGGACAACCACTCCCACAAGAAGAACTTGTTTGA...CCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp CACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTCAGCTTCCGGGCCTTTCTaGAGGCCACCATGGGAATGT +
Preference number: 5 (lower is better)
Translates to: HTPYFALSCPSQTYSDPSASGPF*RPPWEC
Trigger: ACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGC...TGAGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTTGGCAATGTTCCCATTCGCTTCCGGGCCTTTCTaGAGGCCACCATGGGAATGT +
Preference number: 5 (lower is better)
Translates to: KVTRTDEAAICELAMFPFASGPF*RPPWEC
Trigger: ACATTCCCATGGTGGCCTCAAGAAAGGCCCGGAAGC...GAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS TCA 90 bp GGGCAGGAGCACAAGGCGATGAAGCAGAAAGAACTCTGTGGATCCTaGCCAGCCCCTGTCATGCTCTTGGGCAACAGAAAGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: GQEHKAMKQKELCGS*PAPVMLLGNRKQLH
Trigger: ATGGAGCTGCTTTCTGTTGCCCAAGAGCATGACAGGGGCTGGTCAGGATCCACAGAGTTCTTTCTGCTTCATCGCCTTGTGCTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CCA 90 bp GATGCACCCGAAGACCCACATCATAGCCAATCACCTAGGGTTCTCTaGACTCGCTGGGGGTCCTCAGTCAATGCTAGAACCTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: DAPEDPHHSQSPRVL*TRWGSSVNARTLGG
Trigger: ACCCCCTAAGGTTCTAGCATTGACTGAGGACCCCCAGCGAGTCCAGAGAACCCTAGGTGATTGGCTATGATGTGGGTCTTCGGGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CCA 90 bp TCCCTGCCCTCCAGCAGCTGGCAGTTAGAGAAATCAGACAACTCCTaGGGCACAGGAACATCTCTATTTCCATTCCCCAGAAGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: SLPSSSWQLEKSDNS*GTGTSLFPFPRSPL
Trigger: CAGGGGGCTTCTGGGGAATGGAAATAGAGATGTTCCTGTGCCCCAGGAGTTGTCTGATTTCTCTAACTGCCAGCTGCTGGAGGGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS-3UTR CAA 90 bp ACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TGAGKPHALLCPFLSIPDSHKPP*WQGFLE
Trigger: TTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGA...GTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp AAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGACATGCACCGCGTTTTaGTTCCAGTTACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: KGAEKPRGSGPMESRKTWTCTAF*FQLPTN
Trigger: GTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGT...CCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTGAGGCCGTGATCTGCTaGTCAGGGATGCTGTTATTC +
Preference number: 5 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTEAVIC*SGMLLF
Trigger: GAATAACAGCATCCCTGACAAGCAGATCACGGCCTC...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp CATTACTGTAGGCAACCTTGTAGGATGCCACAAACTGGACAGAGCCAAAGTTACCGCAGGGCGATGCGGTaGTGCCAGGCTACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HYCRQPCRMPQTGQSQSYRRAMR*CQATGR
Trigger: CCTGCCTGTAGCCTGGCACAACCGCATCGCCCTGCG...GTAACTTTGGCTCTGTCCAGTTTGTGGCATCCTACAAGGTTGCCTACAGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CAA 90 bp GGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAGAGTGGTTGTCCCAGTaGCCAGGGAAGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: GDLKGLRSQEAAGPWKAGEWLSQ*PGKILL
Trigger: CAGTAAGATCTTCCCTGGCAACTGGGACAACCACTC...TCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268150.13
ENST00000542878.5
ENST00000558018.5
CDS-3UTR CAA 90 bp TGTCTTGCTCTCTCCCCTCACCCCAAGTCATGGTCATCTCATCAGCCTCTAGCTCCGACAGAGCAGTCCTaGTCTTGCTCTCTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: CLALSPHPKSWSSHQPLAPTEQS*SCSLPS
Trigger: TGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGG...AGCTAGAGGCTGATGAGATGACCATGACTTGGGGTGAGGGGAGAGAGCAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS GCA 90 bp GCTCCACTGGCCTTCCTTCCACCCTTCAACATGCCCCAGGGCCTTTaGATTTACCAATTCCTTGCCTGCAGTGCTCTTTTTGCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: APLAFLPPFNMPQGL*IYQFLACSALFAVL
Trigger: CAGCACTGCAAAAAGAGCACTGCAGGCAAGGAATTGGTAAATGCAAAGGCCCTGGGGCATGTTGAAGGGTGGAAGGAAGGCCAGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS CCA 90 bp TCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCCAGGGCGACGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPRTSWEISSHKPPL*QGFLEQISRATRRL
Trigger: CAGCCTCCTCGTCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CCA 90 bp GAAGACCCACATCATAGCCAATCACCTAGGGTTCTCTGGACTCGCTaGGGGTCCTCAGTCAATGCTAGAACCTTAGGGGGTATGGACCAC +
Preference number: 5 (lower is better)
Translates to: EDPHHSQSPRVLWTR*GSSVNARTLGGMDH
Trigger: GTGGTCCATACCCCCTAAGGTTCTAGCATTGACTGAGGACCCCCAGCGAGTCCAGAGAACCCTAGGTGATTGGCTATGATGTGGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CCA 90 bp GACGACCCAGTGATGAACAGGACAACATCCCTGCCCTCCAGCAGCTaGCAGTTAGAGAAATCAGACAACTCCTGGGGCACAGGAACATCT +
Preference number: 5 (lower is better)
Translates to: DDPVMNRTTSLPSSS*QLEKSDNSWGTGTS
Trigger: AGATGTTCCTGTGCCCCAGGAGTTGTCTGATTTCTCTAACTGCCAGCTGCTGGAGGGCAGGGATGTTGTCCTGTTCATCACTGGGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS-3UTR CAA 90 bp GATCGGCGGTCCGGACAGGGGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCGAAGATAAATATATTTaGGAAGCTGCCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: DRRSGQGQGNHTPYFALSEDKYI*EAACVL
Trigger: GAGGACACAGGCAGCTTCCAAAATATATTTATCTTC...GGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCCCCTGTCCGGACCGCCGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268150.13
ENST00000558018.5
CDS TCA 90 bp CTCAAGTGTGAGATGGGAGTGGGAAAGTCAGTTCCAATTGCGGGATaGAGAAGGCTGAAAAGGCCCATGTGCAGACATGCCGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LKCEMGVGKSVPIAG*RRLKRPMCRHAAEL
Trigger: GAGCTCAGCGGCATGTCTGCACATGGGCCTTTTCAGCCTTCTTCATCCCGCAATTGGAACTGACTTTCCCACTCCCATCTCACACTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557944.1
CDS TCA 90 bp CACCACTCAAGACATTTGCCTCCAGGGTGTGTTGACAATGCCTGCTaGTGGTACCATCATCTCCTGATGGTGATGCACCAGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: HHSRHLPPGCVDNAC*WYHHLLMVMHQGTT
Trigger: GGTGGTTCCCTGGTGCATCACCATCAGGAGATGATGGTACCATCAGCAGGCATTGTCAACACACCCTGGAGGCAAATGTCTTGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 90 bp TCAGCCTCTAGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCGTTCAGCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: SASSFSSELLLLSVI*SSPQVCLPCVQLTA
Trigger: GGCTGTGAGCTGAACGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCTAGAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS GCA 90 bp GTTTGCAAGACTCACCCTCTCTTGGCCCTGAGCAGGGGCCAGTCATaGCTGGATACAGGCAACTTTAATGGCCAAAGGCTTCAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VCKTHPLLALSRGQS*LDTGNFNGQRLQAK
Trigger: TTTGGCTTGAAGCCTTTGGCCATTAAAGTTGCCTGTATCCAGGCATGACTGGCCCCTGCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 90 bp GCTCCAGAAGCCTGCATGGACCGTCACTGGAGGCATGATTTCTGCTaGGGAATTAGAAGTTCCCCAGAGGAGGGAATATTTGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: APEACMDRHWRHDFC*GIRSSPEEGIFELG
Trigger: ACCCAGCTCAAATATTCCCTCCTCTGGGGAACTTCTAATTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 90 bp CTGATGTCTTTTTCTCTATCAATCAGAATGCCCTGGGTCATGGGTTaGCAGACAGCAAACACCTGGGTGGGGCTGCTATGGCCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: LMSFSLSIRMPWVMG*QTANTWVGLLWPGD
Trigger: GTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAAAGACATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS-3UTR CAA 90 bp ACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTCAGATCCCTTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: TTRPTLPFPVHPRPTQIPSHKPP*WQGFLE
Trigger: TTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGA...AGGGATCTGAGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558018.5
ENST00000566497.5
CDS-3UTR CAA 90 bp GTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTTCGTCTCACAGTGGTTGCCACATGCACCGCGTTTTaGTTCCAGTTACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: VPILQAQWLDTFRLTVVATCTAF*FQLPTN
Trigger: GTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGT...GGCAACCACTGTGAGACGAAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS GCA 90 bp AACGCTCCAGAAGCCTGCATGGACCGTCACTGGAGGCATGATTTCTaGTGGGGAATTAGAAGTTCCCCAGAGGAGGGAATATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: NAPEACMDRHWRHDF*WGIRSSPEEGIFEL
Trigger: CAGCTCAAATATTCCCTCCTCTGGGGAACTTCTAATTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTCTGGAGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS-3UTR CAA 90 bp GGCAGGGAAACCACACGCCCTACTTTGCCCTTTCCTGTCCATCCCAGACCTACTTTGTGGCAGGGGTTTTaGGAACAGATATCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GRETTRPTLPFPVHPRPTLWQGF*EQISVC
Trigger: ACACACAGATATCTGTTCCAAAAACCCCTGCCACAA...AGTAGGTCTGGGATGGACAGGAAAGGGCAAAGTAGGGCGTGTGGTTTCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS-3UTR CAA 90 bp CCCCAGTCAAAGGCCTTCCCGACAGAGCAGTCCTTGTCTTGCTCTCTCCCCTCACATTTAACCAATTCCTaGCCTGCAGTGCTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PQSKAFPTEQSLSCSLPSHLTNS*PAVLFL
Trigger: CAAAAAGAGCACTGCAGGCAAGGAATTGGTTAAATG...TGAGGGGAGAGAGCAAGACAAGGACTGCTCTGTCGGGAAGGCCTTTGACTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS TCA 90 bp CCACCTGTACTCTCACCACTCAAGACATTTGCCTCCAGGGTGTGTTaGCAATGCCTGCTGATGGTACCATCATCTCCTGATGGTGATGCA +
Preference number: 5 (lower is better)
Translates to: PPVLSPLKTFASRVC*QCLLMVPSSPDGDA
Trigger: TGCATCACCATCAGGAGATGATGGTACCATCAGCAGGCATTGTCAACACACCCTGGAGGCAAATGTCTTGAGTGGTGAGAGTACAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS TCA 90 bp GATAGAACAGTTGGGGATGGGCAAGAGATACAACTCCCAAGAGAATaGTGGGGGTGTCTCCCACCTGGAAGAATCCTCACTCCACAAGTG +
Preference number: 5 (lower is better)
Translates to: DRTVGDGQEIQLPRE*WGCLPPGRILTPQV
Trigger: CACTTGTGGAGTGAGGATTCTTCCAGGTGGGAGACACCCCCATCATTCTCTTGGGAGTTGTATCTCTTGCCCATCCCCAACTGTTCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 90 bp TCATGGTCATCTCATCAGCCTCTAGCTTTTCTTCAGAGCTGTTACTaGTCTCTGTCATCTGCTCCTCGCCTCAAGTCTGCCTTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: SWSSHQPLAFLQSCY*SLSSAPRLKSAFLA
Trigger: CGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCTAGAGGCTGATGAGATGACCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS CCA 90 bp AAGTCCACAGATGAGGAAGATTGCCCAACGCTCCAGAAGCCTGCATaGACCGTCACTGGAGGCATGATTTCTGCTGGGGAATTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KSTDEEDCPTLQKPA*TVTGGMISAGELEV
Trigger: AACTTCTAATTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTCTGGAGCGTTGGGCAATCTTCCTCATCTGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 90 bp GCAAGAGATACAACTCCCAAGAGAATGATGGGGGTGTCTCCCACCTaGAAGAATCCTCACTCCACAAGTGTCTATCCCTCTGGGGAATTG +
Preference number: 5 (lower is better)
Translates to: ARDTTPKRMMGVSPT*KNPHSTSVYPSGEL
Trigger: CAATTCCCCAGAGGGATAGACACTTGTGGAGTGAGGATTCTTCCAGGTGGGAGACACCCCCATCATTCTCTTGGGAGTTGTATCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS-3UTR CAA 90 bp AGTTTTTCATGTGGCTGGCTCTCCATCATTCAGGCCCCCAGTCAAAGGCCTTCCACATGCACCGCGTTTTaGTTCCAGTTACCCACAAAC +
Preference number: 5 (lower is better)
Translates to: SFSCGWLSIIQAPSQRPSTCTAF*FQLPTN
Trigger: GTTTGTGGGTAACTGGAACAAAAACGCGGTGCATGT...GGAAGGCCTTTGACTGGGGGCCTGAATGATGGAGAGCCAGCCACATGAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS GCA 90 bp TCATGGTCATCTCATCAGCCTCTAGCTTTTCTTCAGAGCTGTTACTaGTCTCTGTCATCTGCTCCTCGCCTCAAGTCTGCCTTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SWSSHQPLAFLQSCY*SLSSAPRLKSAFLA
Trigger: AGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCTAGAGGCTGATGAGATGACCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS TCA 90 bp GTGTACAACCTACACAACTGTACATGTACCCATGAAGGCTCAGAATaGAACCCAGCTCCACCACCACTATCACCCTCAACAGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: VYNLHNCTCTHEGSE*NPAPPPLSPSTGHC
Trigger: ACAGTGACCTGTTGAGGGTGATAGTGGTGGTGGAGCTGGGTTTCATTCTGAGCCTTCATGGGTACATGTACAGTTGTGTAGGTTGTACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS GCA 90 bp TCAGCCTCTAGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCTACTCAAGTTCATAC +
Preference number: 5 (lower is better)
Translates to: SASSFSSELLLLSVI*SSPQVCLPCYSSSY
Trigger: GTATGAACTTGAGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCTAGAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560553.1
CDS GCA 90 bp CTCTGTCATCTGCTCCTCGCCTCAAGTCTGCCTTCCTTGCTACAATaGAAATTACATGAGGTCAAGGAATCATTCCCTAGAGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: LCHLLLASSLPSLLQ*KLHEVKESFPRAKH
Trigger: GTGCTTGGCTCTAGGGAATGATTCCTTGACCTCATGTAATTTGCATTGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 90 bp TCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCCATTATCTCTTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SPRTSWEISSHKPPL*QGFLEQISIISSSP
Trigger: GGGAGAGGAAGAGATAATGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS GCA 90 bp TCAGCCTCTAGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCTACAATGCAAATTAC +
Preference number: 5 (lower is better)
Translates to: SASSFSSELLLLSVI*SSPQVCLPCYNANY
Trigger: GTAATTTGCATTGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCTAGAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 90 bp TTACTGCTCTCTGTCATCTGCTCCTCGCCTCAAGTCTGCCTTCCTTaGTACAATGCAAATTACATGAGGTCAAGGAATCATTCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: LLLSVICSSPQVCLP*YNANYMRSRNHSLE
Trigger: CTCTAGGGAATGATTCCTTGACCTCATGTAATTTGCATTGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 90 bp AGCAAACAAAACAGACAGATTCTCTGCCCTCGTAAAGCTGACATCTaGCAAACACACCTAACGCTACATGTTCTAGAAGCTACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SKQNRQILCPRKADI*QTHLTLHVLEATGE
Trigger: CTCTCCTGTAGCTTCTAGAACATGTAGCGTTAGGTGTGTTTGGCAGATGTCAGCTTTACGAGGGCAGAGAATCTGTCTGTTTTGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS-3UTR CAA 90 bp TTTAACCAATTCCTTGCCTGCAGTGCTCTTTTTGCAGTGCTGTTTTTAAGTTTTGGGGTCTCAAACAGGTaGACATGCACCGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: FNQFLACSALFAVLFLSFGVSNR*TCTAFL
Trigger: CAAAAACGCGGTGCATGTCAACCTGTTTGAGACCCC...AAAACTTAAAAACAGCACTGCAAAAAGAGCACTGCAGGCAAGGAATTGGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS-3UTR CAA 90 bp CATAAACCACCGTTGTGGCAGGGGTTTTTGGAACAGATATCTGTGTGTAAGATAGAAGATAAATATATTTaGGAAGCTGCCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: HKPPLWQGFLEQISVCKIEDKYI*EAACVL
Trigger: GAGGACACAGGCAGCTTCCAAAATATATTTATCTTC...TATCTTACACACAGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558018.5
CDS GCA 72 bp CAGCAGGGAGGGCCACCTCCTAGGATTGGCCAACAGTaGCCCCCTACCCGCACCCCCAGCACTCACCGTTCA +
Preference number: 6 (lower is better)
Translates to: QQGGPPPRIGQQ*PPTRTPSTHRS
Trigger: TGAACGGTGAGTGCTGGGGGTGCGGGTAGGGGGGCACTGTTGGCCAATCCTAGGAGGTGGCCCTCCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS GCA 72 bp GTGCTGGCTGACAATGGCAGTGGTGCTGGGGACCACTaGCCACTGGTGGAAGAGCTGGCAGCTGGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: VLADNGSGAGDH*PLVEELAAGVW
Trigger: CCAGACCCCAGCTGCCAGCTCTTCCACCAGTGGGCAGTGGTCCCCAGCACCACTGCCATTGTCAGCCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS GCA 72 bp ACACTGCGGGTCCCTGGGGCTCTTCACCCACCAAGCTaGCCCTCCATCTCTTGGCTCCAGCTCCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: TLRVPGALHPPS*PSISWLQLHWP
Trigger: AGGCCAGTGGAGCTGGAGCCAAGAGATGGAGGGGCAGCTTGGTGGGTGAAGAGCCCCAGGGACCCGCAGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS TCA 72 bp GACAGCAAACACCTGGGTGGGGCTGCTATGGCCAGGTaGCCCCCTAGAGTGCGTTGCCCGAGTGAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: DSKHLGGAAMAR*PPRVRCPSEAW
Trigger: CCAGGCTTCACTCGGGCAACGCACTCTAGGGGGTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS CCA 72 bp CTGACAATGGCAGTGGTGCTGGGGACCACTGCCCACTaGTGGAAGAGCTGGCAGCTGGGGTCTGGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: LTMAVVLGTTAH*WKSWQLGSGEA
Trigger: TGCCTCTCCAGACCCCAGCTGCCAGCTCTTCCACCAGTGGGCAGTGGTCCCCAGCACCACTGCCATTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS CCA 72 bp CCAAGCTGCCCCTCCATCTCTTGGCTCCAGCTCCACTaGCCTTCCTTCCACCCTTCAACATGCCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: PSCPSISWLQLH*PSFHPSTCPRA
Trigger: GGCCCTGGGGCATGTTGAAGGGTGGAAGGAAGGCCAGTGGAGCTGGAGCCAAGAGATGGAGGGGCAGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS CCA 72 bp GGTTGGCAGACAGCAAACACCTGGGTGGGGCTGCTATaGCCAGGTGACCCCCTAGAGTGCGTTGCCCGAGTG +
Preference number: 6 (lower is better)
Translates to: GWQTANTWVGLL*PGDPLECVARV
Trigger: CACTCGGGCAACGCACTCTAGGGGGTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS CAA 90 bp AGCCCCTGTCATGCTCTTGGGCAACAGAAAGCAGCTCCATCCGCCTaGCAGGGCCAACTGTGCGACCTTCTCACTGCCGACCCCACCACC +
Preference number: 6 (lower is better)
Translates to: SPCHALGQQKAAPSA*QGQLCDLLTADPTT
Trigger: GGTGGTGGGGTCGGCAGTGAGAAGGTCGCACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAGAGCATGACAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CCA 72 bp ATGCCCTGGGTCATGGGTTGGCAGACAGCAAACACCTaGGTGGGGCTGCTATGGCCAGGTGACCCCCTAGAG +
Preference number: 6 (lower is better)
Translates to: MPWVMGWQTANT*VGLLWPGDPLE
Trigger: CTCTAGGGGGTCACCTGGCCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS GCA 72 bp CCCCAGACCTCAGCCCCACCCACACACATGCACACGTaGACACATGCACACATGCACCAACACTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PQTSAPPTHMHT*THAHMHQHSPA
Trigger: GGCTGGAGAGTGTTGGTGCATGTGTGCATGTGTGCACGTGTGCATGTGTGTGGGTGGGGCTGAGGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp GGTGGGGAGCATCTGGTAGCTGCAGACAGGTCCCTCTaGCTGAAATGCAGAAATCCCACCAGGGCGACGAGG +
Preference number: 6 (lower is better)
Translates to: GGEHLVAADRSL*LKCRNPTRATR
Trigger: CCTCGTCGCCCTGGTGGGATTTCTGCATTTCAGCCAGAGGGACCTGTCTGCAGCTACCAGATGCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557944.1
CDS CCA 72 bp TGTTCTGGGGATGCTGTCACACAGGCCTGTGAGGGCTaGCCCGGGAAGCTGGCCTTTGTTTCACTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: CSGDAVTQACEG*PGKLAFVSLSP
Trigger: AGGGCTGAGTGAAACAAAGGCCAGCTTCCCGGGCCAGCCCTCACAGGCCTGTGTGACAGCATCCCCAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 90 bp AGTGGTCCAGACCCTGAAGGAAGCAGACAGGGTACCTGGGCTTCCTaGGTTTGCAAGACTCACCCTCTCTTGGCCCTGAGCAGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SGPDPEGSRQGTWAS*VCKTHPLLALSRGQ
Trigger: CTGGCCCCTGCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGTACCCTGTCTGCTTCCTTCAGGGTCTGGACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS TCA 72 bp TTCCTCTCCCTCTTCCCCCGTGTGCTGGATGGAGCCTaGGTCCGCCTAGAGCCAAGGAAGTCCATGTGTAGG +
Preference number: 6 (lower is better)
Translates to: FLSLFPRVLDGA*VRLEPRKSMCR
Trigger: CCTACACATGGACTTCCTTGGCTCTAGGCGGACTCAGGCTCCATCCAGCACACGGGGGAAGAGGGAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559143.1
ENST00000559770.1
CDS TCA 72 bp TCCAAGTGGCCTGGGAGTGTCCAGAAAAGTGCTGGCTaGCAATGGCAGTGGTGCTGGGGACCACTGCCCACT +
Preference number: 6 (lower is better)
Translates to: SKWPGSVQKSAG*QWQWCWGPLPT
Trigger: AGTGGGCAGTGGTCCCCAGCACCACTGCCATTGTCAGCCAGCACTTTTCTGGACACTCCCAGGCCACTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS GCA 72 bp ATGCTCTTGGGCAACAGAAAGCAGCTCCATCCGCCTTaGAGGGCCAACTGTGCGACCTTCTCACTGCCGACC +
Preference number: 6 (lower is better)
Translates to: MLLGNRKQLHPP*RANCATFSLPT
Trigger: GGTCGGCAGTGAGAAGGTCGCACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CCA 72 bp TCTAAGAAGCTCCTAGGTGATGACACTGCGGGTCCCTaGGGCTCTTCACCCACCAAGCTGCCCCTCCATCTC +
Preference number: 6 (lower is better)
Translates to: SKKLLGDDTAGP*GSSPTKLPLHL
Trigger: GAGATGGAGGGGCAGCTTGGTGGGTGAAGAGCCCCAGGGACCCGCAGTGTCATCACCTAGGAGCTTCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS CAA 72 bp CATGCTCTTGGGCAACAGAAAGCAGCTCCATCCGCCTaGCAGGGCCAACTGTGCGACCTTCTCACTGCCGAC +
Preference number: 6 (lower is better)
Translates to: HALGQQKAAPSA*QGQLCDLLTAD
Trigger: GTCGGCAGTGAGAAGGTCGCACAGTTGGCCCTGCAAGGCGGATGGAGCTGCTTTCTGTTGCCCAAGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CAA 90 bp TCTGGAGAGGCAGGCAAGGTCCAGGGCAGGTCTCTTGGCAGCAGTTaGATTGCAAAGGAGGCCCATGAGGACTTTCAGGCAGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: SGEAGKVQGRSLGSS*IAKEAHEDFQAGAV
Trigger: CACTGCCCCTGCCTGAAAGTCCTCATGGGCCTCCTTTGCAATCAAACTGCTGCCAAGAGACCTGCCCTGGACCTTGCCTGCCTCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CAA 90 bp CCCCAGAAGAGGAGAGGCCTGAGGCAGGCTAAAACCTGGGCAGCTTaGCAGAGGACACCAATTCTGCACAATGTGCTCAACGCAGACCCC +
Preference number: 6 (lower is better)
Translates to: PQKRRGLRQAKTWAA*QRTPILHNVLNADP
Trigger: GGGGTCTGCGTTGAGCACATTGTGCAGAATTGGTGTCCTCTGCAAAGCTGCCCAGGTTTTAGCCTGCCTCAGGCCTCTCCTCTTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS TCA 72 bp GCAGGGGCAGTGGAAGGAAGCATTGTTCTGGCCCATTaGGCAGGTTCCGCCCACCAATTCAGGCACAGGTTG +
Preference number: 6 (lower is better)
Translates to: AGAVEGSIVLAH*AGSAHQFRHRL
Trigger: CAACCTGTGCCTGAATTGGTGGGCGGAACCTGCTCAATGGGCCAGAACAATGCTTCCTTCCACTGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS TCA 72 bp CCTGCTTGTCCAGCCGTGCATAGGAGGGGTTCCAGCTaGAGAGATGCAAGCCCCAGGTCTTGTAGCTGCGTT +
Preference number: 6 (lower is better)
Translates to: PACPAVHRRGSS*RDASPRSCSCV
Trigger: AACGCAGCTACAAGACCTGGGGCTTGCATCTCTTCAGCTGGAACCCCTCCTATGCACGGCTGGACAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558029.5
CDS GCA 72 bp GCTGTTATTCTTCAGGCCCAGGGGATTGGCGCATCCTaGCAGCAAGGTGGGCTGTCATCTGGATCTGGGATC +
Preference number: 6 (lower is better)
Translates to: AVILQAQGIGAS*QQGGLSSGSGI
Trigger: GATCCCAGATCCAGATGACAGCCCACCTTGCTGGCAGGATGCGCCAATCCCCTGGGCCTGAAGAATAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS GCA 72 bp CTCAGCCCCACCCACACACATGCACACGTGCACACATaGACACATGCACCAACACTCTCCAGCCGACTGGAA +
Preference number: 6 (lower is better)
Translates to: LSPTHTHAHVHT*THAPTLSSRLE
Trigger: TTCCAGTCGGCTGGAGAGTGTTGGTGCATGTGTGCATGTGTGCACGTGTGCATGTGTGTGGGTGGGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp TCTCCTCGCATAAACCACCGTTGTGGCAGGGGTTTTTaGAACAGATATCCAGGGCGACGAGGAGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SPRINHRCGRGF*NRYPGRRGGWG
Trigger: CCCCCAGCCTCCTCGTCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CCA 72 bp TGTCAGGGATGCTGTTATTCTTCAGGCCCAGGGGATTaGCGCATCCTGCCAGCAAGGTGGGCTGTCATCTGG +
Preference number: 6 (lower is better)
Translates to: CQGCCYSSGPGD*RILPARWAVIW
Trigger: CCAGATGACAGCCCACCTTGCTGGCAGGATGCGCCAATCCCCTGGGCCTGAAGAATAACAGCATCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CAA 72 bp ACCTGGGCTTCCTTGGTTTGCAAGACTCACCCTCTCTaGGCCCTGAGCAGGGGCCAGTCATGCCTGGATACA +
Preference number: 6 (lower is better)
Translates to: TWASLVCKTHPL*ALSRGQSCLDT
Trigger: TGTATCCAGGCATGACTGGCCCCTGCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 72 bp GACCCTGAAGGAAGCAGACAGGGTACCTGGGCTTCCTaGGTTTGCAAGACTCACCCTCTCTTGGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: DPEGSRQGTWAS*VCKTHPLLALS
Trigger: GCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGTACCCTGTCTGCTTCCTTCAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 90 bp AAACCCAAGAAGGTCACACGCACAGACGAGGCGGCGATCTGTGAGTaGGCAATGTTCCCATTCTCCAGGCCCAGTGGCTCGACACATTCC +
Preference number: 6 (lower is better)
Translates to: KPKKVTRTDEAAICE*AMFPFSRPSGSTHS
Trigger: GGAATGTGTCGAGCCACTGGGCCTGGAGAATGGGAACATTGCCAACTCACAGATCGCCGCCTCGTCTGTGCGTGTGACCTTCTTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542878.5
ENST00000558352.5
ENST00000559997.5
CDS CAA 90 bp GTGATCTGCTTGTCAGGGATGCTGTTATTCTTCAGGCCCAGGGGATaGGCGCATCCTGCCAGCAAGGTGGGCTGTCATCTGGATCTGGGA +
Preference number: 6 (lower is better)
Translates to: VICLSGMLLFFRPRG*AHPASKVGCHLDLG
Trigger: TCCCAGATCCAGATGACAGCCCACCTTGCTGGCAGGATGCGCCAATCCCCTGGGCCTGAAGAATAACAGCATCCCTGACAAGCAGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS CAA 90 bp AGACAGGGTACCTGGGCTTCCTTGGTTTGCAAGACTCACCCTCTCTaGGCCCTGAGCAGGGGCCAGTCATGCCTGGATACAGGCAACTTT +
Preference number: 6 (lower is better)
Translates to: RQGTWASLVCKTHPL*ALSRGQSCLDTGNF
Trigger: AAAGTTGCCTGTATCCAGGCATGACTGGCCCCTGCTCAGGGCCAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGTACCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp GGGAAAGAGGCCAGCAAGTCCACAGATGAGGAAGATTaGCCAACGCTCCAGAAGCCTGCATGGACCGTCACT +
Preference number: 6 (lower is better)
Translates to: GKEASKSTDEED*PTLQKPAWTVT
Trigger: AGTGACGGTCCATGCAGGCTTCTGGAGCGTTGGGCAATCTTCCTCATCTGTGGACTTGCTGGCCTCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS GCA 72 bp ATGACCATGCTAGGCCCCCGAGACAGAGAAATCAGATaGAGCGCAGGCCTCAAGAAGCCAAGGGGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: MTMLGPRDREIR*SAGLKKPRGKR
Trigger: CCTCTTTCCCCTTGGCTTCTTGAGGCCTGCGCTGCATCTGATTTCTCTGTCTCGGGGGCCTAGCATGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 72 bp ACTTTCAGGCAGGGGCAGTGGAAGGAAGCATTGTTCTaGCCCATTGAGCAGGTTCCGCCCACCAATTCAGGC +
Preference number: 6 (lower is better)
Translates to: TFRQGQWKEALF*PIEQVPPTNSG
Trigger: GCCTGAATTGGTGGGCGGAACCTGCTCAATGGGCCAGAACAATGCTTCCTTCCACTGCCCCTGCCTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 72 bp CTGGAAGAATCCTCACTCCACAAGTGTCTATCCCTCTaGGGAATTGAGGGAGGCAGGAGTGGACGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: LEESSLHKCLSL*GIEGGRSGRWD
Trigger: GTCCCACCGTCCACTCCTGCCTCCCTCAATTCCCCAGAGGGATAGACACTTGTGGAGTGAGGATTCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 72 bp ATCTCCTCGCATAAACCACCGTTGTGGCAGGGGTTTTaGGAACAGATATCCAGGGCGACGAGGAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: ISSHKPPLWQGF*EQISRATRRLG
Trigger: CCCCAGCCTCCTCGTCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CAA 72 bp GCAGGCAAGGTCCAGGGCAGGTCTCTTGGCAGCAGTTaGATTGCAAAGGAGGCCCATGAGGACTTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: AGKVQGRSLGSS*IAKEAHEDFQA
Trigger: TGCCTGAAAGTCCTCATGGGCCTCCTTTGCAATCAAACTGCTGCCAAGAGACCTGCCCTGGACCTTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CAA 72 bp TTGTCAGGGATGCTGTTATTCTTCAGGCCCAGGGGATaGGCGCATCCTGCCAGCAAGGTGGGCTGTCATCTG +
Preference number: 6 (lower is better)
Translates to: LSGMLLFFRPRG*AHPASKVGCHL
Trigger: CAGATGACAGCCCACCTTGCTGGCAGGATGCGCCAATCCCCTGGGCCTGAAGAATAACAGCATCCCTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560937.1
CDS GCA 72 bp CTCCAGCTCCACTGGCCTTCCTTCCACCCTTCAACATaGCCCAGGGCCTTTGCATTTACCAATTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LQLHWPSFHPST*PRAFAFTNSLP
Trigger: AGGCAAGGAATTGGTAAATGCAAAGGCCCTGGGGCATGTTGAAGGGTGGAAGGAAGGCCAGTGGAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS GCA 72 bp CACCCACACACATGCACACGTGCACACATGCACACATaGACCAACACTCTCCAGCCGACTGGAAGGCCTATA +
Preference number: 6 (lower is better)
Translates to: HPHTCTRAHMHT*TNTLQPTGRPI
Trigger: TATAGGCCTTCCAGTCGGCTGGAGAGTGTTGGTGCATGTGTGCATGTGTGCACGTGTGCATGTGTGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp CGAGCCAGGATGGGCGTCTCAAACAAGTTCTTCTTGTaGGAGTGGTTGTCCCAGTTGCCAGGGAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: RARMGVSNKFFL*EWLSQLPGKIC
Trigger: GCAGATCTTCCCTGGCAACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCTGGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268151.11
CDS CCA 72 bp GATGAGGAAGATTGCCCAACGCTCCAGAAGCCTGCATaGACCGTCACTGGAGGCATGATTTCTGCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: DEEDCPTLQKPA*TVTGGMISAGE
Trigger: TTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTCTGGAGCGTTGGGCAATCTTCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 72 bp AGTGGTCCAGACCCTGAAGGAAGCAGACAGGGTACCTaGGCTTCCTTGGTTTGCAAGACTCACCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: SGPDPEGSRQGT*ASLVCKTHPLL
Trigger: CAAGAGAGGGTGAGTCTTGCAAACCAAGGAAGCCCAGGTACCCTGTCTGCTTCCTTCAGGGTCTGGACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp CCCCAGAAGAGGAGAGGCCTGAGGCAGGCTAAAACCTaGGCAGCTTTGCAGAGGACACCAATTCTGCACAAT +
Preference number: 6 (lower is better)
Translates to: PQKRRGLRQAKT*AALQRTPILHN
Trigger: ATTGTGCAGAATTGGTGTCCTCTGCAAAGCTGCCCAGGTTTTAGCCTGCCTCAGGCCTCTCCTCTTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp ACTCAGGAATGTGCCGGGCTGCCTTGCACTTGTATCTaGACCTGCATATGGATAGAACAGTTGGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: TQECAGLPCTCI*TCIWIEQLGMG
Trigger: GCCCATCCCCAACTGTTCTATCCATATGCAGGTGCAGATACAAGTGCAAGGCAGCCCGGCACATTCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp AGGATGGGCGTCTCAAACAAGTTCTTCTTGTGGGAGTaGTTGTCCCAGTTGCCAGGGAAGATCTGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: RMGVSNKFFLWE*LSQLPGKICSH
Trigger: GTGGCTGCAGATCTTCCCTGGCAACTGGGACAACCACTCCCACAAGAAGAACTTGTTTGAGACGCCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268151.11
CDS CCA 72 bp TTGCCCAACGCTCCAGAAGCCTGCATGGACCGTCACTaGAGGCATGATTTCTGCTGGGGAATTAGAAGTTCC +
Preference number: 6 (lower is better)
Translates to: LPNAPEACMDRH*RHDFCWGIRSS
Trigger: GGAACTTCTAATTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTCTGGAGCGTTGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS CCA 72 bp CATCATAGCCAATCACCTAGGGTTCTCTGGACTCGCTaGGGGTCCTCAGTCAATGCTAGAACCTTAGGGGGT +
Preference number: 6 (lower is better)
Translates to: HHSQSPRVLWTR*GSSVNARTLGG
Trigger: ACCCCCTAAGGTTCTAGCATTGACTGAGGACCCCCAGCGAGTCCAGAGAACCCTAGGTGATTGGCTATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CCA 72 bp GAAGACCCACATCATAGCCAATCACCTAGGGTTCTCTaGACTCGCTGGGGGTCCTCAGTCAATGCTAGAACC +
Preference number: 6 (lower is better)
Translates to: EDPHHSQSPRVL*TRWGSSVNART
Trigger: GGTTCTAGCATTGACTGAGGACCCCCAGCGAGTCCAGAGAACCCTAGGTGATTGGCTATGATGTGGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CCA 72 bp GTGATGAACAGGACAACATCCCTGCCCTCCAGCAGCTaGCAGTTAGAGAAATCAGACAACTCCTGGGGCACA +
Preference number: 6 (lower is better)
Translates to: VMNRTTSLPSSS*QLEKSDNSWGT
Trigger: TGTGCCCCAGGAGTTGTCTGATTTCTCTAACTGCCAGCTGCTGGAGGGCAGGGATGTTGTCCTGTTCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 72 bp CCCTGCCCCAAACACTCAGGAATGTGCCGGGCTGCCTaGCACTTGTATCTGCACCTGCATATGGATAGAACA +
Preference number: 6 (lower is better)
Translates to: PCPKHSGMCRAA*HLYLHLHMDRT
Trigger: TGTTCTATCCATATGCAGGTGCAGATACAAGTGCAAGGCAGCCCGGCACATTCCTGAGTGTTTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CAA 90 bp ACATCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCCAGGGCGACGAGGAGG +
Preference number: 6 (lower is better)
Translates to: TSPRTSWEISSHKPP*WQGFLEQISRATRR
Trigger: CCTCCTCGTCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CAA 90 bp AGCTCCACTGGCCTTCCTTCCACCCTTCAACATGCCCCAGGGCCTTaGCATTTACCAATTCCTTGCCTGCAGTGCTCTTTTTGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: SSTGLPSTLQHAPGP*HLPIPCLQCSFCSA
Trigger: AGCACTGCAAAAAGAGCACTGCAGGCAAGGAATTGGTAAATGCAAAGGCCCTGGGGCATGTTGAAGGGTGGAAGGAAGGCCAGTGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS CAA 90 bp TTCACTCAGCCCTGCCCCAAACACTCAGGAATGTGCCGGGCTGCCTaGCACTTGTATCTGCACCTGCATATGGATAGAACAGTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: FTQPCPKHSGMCRAA*HLYLHLHMDRTVGD
Trigger: ATCCCCAACTGTTCTATCCATATGCAGGTGCAGATACAAGTGCAAGGCAGCCCGGCACATTCCTGAGTGTTTGGGGCAGGGCTGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS TCA 72 bp GAGATGGGAGTGGGAAAGTCAGTTCCAATTGCGGGATaGAGAAGGCTGAAAAGGCCCATGTGCAGACATGCC +
Preference number: 6 (lower is better)
Translates to: EMGVGKSVPIAG*RRLKRPMCRHA
Trigger: GGCATGTCTGCACATGGGCCTTTTCAGCCTTCTTCATCCCGCAATTGGAACTGACTTTCCCACTCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557944.1
CDS TCA 72 bp GTTGGGGATGGGCAAGAGATACAACTCCCAAGAGAATaGTGGGGGTGTCTCCCACCTGGAAGAATCCTCACT +
Preference number: 6 (lower is better)
Translates to: VGDGQEIQLPRE*WGCLPPGRILT
Trigger: AGTGAGGATTCTTCCAGGTGGGAGACACCCCCATCATTCTCTTGGGAGTTGTATCTCTTGCCCATCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp GAAGCCTGCATGGACCGTCACTGGAGGCATGATTTCTaGTGGGGAATTAGAAGTTCCCCAGAGGAGGGAATA +
Preference number: 6 (lower is better)
Translates to: EACMDRHWRHDF*WGIRSSPEEGI
Trigger: TATTCCCTCCTCTGGGGAACTTCTAATTCCCCAGCAGAAATCATGCCTCCAGTGACGGTCCATGCAGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558773.1
CDS GCA 72 bp GGGCAGCTTTGCAGAGGACACCAATTCTGCACAATGTaGTCAACGCAGACCCCTCTACAGATCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GQLCRGHQFCTM*STQTPLQIICF
Trigger: GAAGCAGATGATCTGTAGAGGGGTCTGCGTTGAGCACATTGTGCAGAATTGGTGTCCTCTGCAAAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp GAATGTGCCGGGCTGCCTTGCACTTGTATCTGCACCTaGATATGGATAGAACAGTTGGGGATGGGCAAGAGA +
Preference number: 6 (lower is better)
Translates to: ECAGLPCTCICT*IWIEQLGMGKR
Trigger: TCTCTTGCCCATCCCCAACTGTTCTATCCATATGCAGGTGCAGATACAAGTGCAAGGCAGCCCGGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp TTTTCTCTATCAATCAGAATGCCCTGGGTCATGGGTTaGCAGACAGCAAACACCTGGGTGGGGCTGCTATGG +
Preference number: 6 (lower is better)
Translates to: FSLSIRMPWVMG*QTANTWVGLLW
Trigger: CCATAGCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS CCA 72 bp TGTCTTTTTCTCTATCAATCAGAATGCCCTGGGTCATaGGTTGGCAGACAGCAAACACCTGGGTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: CLFLYQSECPGS*VGRQQTPGWGC
Trigger: GCAGCCCCACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS CAA 72 bp CGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: RTSWEISSHKPP*WQGFLEQISRA
Trigger: CGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CAA 72 bp GGCCTTCCTTCCACCCTTCAACATGCCCCAGGGCCTTaGCATTTACCAATTCCTTGCCTGCAGTGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: GLPSTLQHAPGP*HLPIPCLQCSF
Trigger: AAAAGAGCACTGCAGGCAAGGAATTGGTAAATGCAAAGGCCCTGGGGCATGTTGAAGGGTGGAAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560553.1
ENST00000617199.1
CDS CAA 72 bp TACCAAAGACACCATATGTCTGCAAAGAGGAATCCCTaGTGGAATCCCAGGTACCCCCAGACCTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: YQRHHMSAKRNP*WNPRYPQTSAP
Trigger: TGGGGCTGAGGTCTGGGGGTACCTGGGATTCCACAAGGGATTCCTCTTTGCAGACATATGGTGTCTTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp AGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCGTTCAG +
Preference number: 6 (lower is better)
Translates to: SFSSELLLLSVI*SSPQVCLPCVQ
Trigger: CTGAACGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613965.1
CDS GCA 72 bp CTAAAACCTGGGCAGCTTTGCAGAGGACACCAATTCTaGACAATGTGCTCAACGCAGACCCCTCTACAGATC +
Preference number: 6 (lower is better)
Translates to: LKPGQLCRGHQF*TMCSTQTPLQI
Trigger: GATCTGTAGAGGGGTCTGCGTTGAGCACATTGTGCAGAATTGGTGTCCTCTGCAAAGCTGCCCAGGTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp ACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCCAGGGCGACG +
Preference number: 6 (lower is better)
Translates to: TSWEISSHKPPL*QGFLEQISRAT
Trigger: CGTCGCCCTGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268150.13
ENST00000268151.11
ENST00000558029.5
ENST00000566497.5
CDS CCA 72 bp ACAACTCCCAAGAGAATGATGGGGGTGTCTCCCACCTaGAAGAATCCTCACTCCACAAGTGTCTATCCCTCT +
Preference number: 6 (lower is better)
Translates to: TTPKRMMGVSPT*KNPHSTSVYPS
Trigger: AGAGGGATAGACACTTGTGGAGTGAGGATTCTTCCAGGTGGGAGACACCCCCATCATTCTCTTGGGAGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp AGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCTACTCA +
Preference number: 6 (lower is better)
Translates to: SFSSELLLLSVI*SSPQVCLPCYS
Trigger: TGAGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560553.1
CDS CCA 72 bp TCCAGCAGCTGGCAGTTAGAGAAATCAGACAACTCCTaGGGCACAGGAACATCTCTATTTCCATTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: SSSWQLEKSDNS*GTGTSLFPFPR
Trigger: TCTGGGGAATGGAAATAGAGATGTTCCTGTGCCCCAGGAGTTGTCTGATTTCTCTAACTGCCAGCTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS GCA 72 bp AGCTTTTCTTCAGAGCTGTTACTGCTCTCTGTCATCTaGTCCTCGCCTCAAGTCTGCCTTCCTTGCTACAAT +
Preference number: 6 (lower is better)
Translates to: SFSSELLLLSVI*SSPQVCLPCYN
Trigger: ATTGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAACAGCTCTGAAGAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp TTTTCTCTATCAATCAGAATGCCCTGGGTCATGGGTTaGCAGACAGCAAACACCACACCTGTTACCCACATC +
Preference number: 6 (lower is better)
Translates to: FSLSIRMPWVMG*QTANTTPVTHI
Trigger: GATGTGGGTAACAGGTGTGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559997.5
CDS CCA 72 bp TGTCTTTTTCTCTATCAATCAGAATGCCCTGGGTCATaGGTTGGCAGACAGCAAACACCACACCTGTTACCC +
Preference number: 6 (lower is better)
Translates to: CLFLYQSECPGS*VGRQQTPHLLP
Trigger: GGGTAACAGGTGTGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559997.5
CDS CAA 90 bp ACATCTCCTCGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCCATTATCTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: TSPRTSWEISSHKPP*WQGFLEQISIISSS
Trigger: AGAGGAAGAGATAATGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCGAGGAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS CAA 90 bp GTTACTGCTCTCTGTCATCTGCTCCTCGCCTCAAGTCTGCCTTCCTaGCTACAATGCAAATTACATGAGGTCAAGGAATCATTCCCTAGA +
Preference number: 6 (lower is better)
Translates to: VTALCHLLLASSLPS*LQCKLHEVKESFPR
Trigger: TCTAGGGAATGATTCCTTGACCTCATGTAATTTGCATTGTAGCAAGGAAGGCAGACTTGAGGCGAGGAGCAGATGACAGAGAGCAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617199.1
CDS CCA 72 bp TCTCCTCGCATAAACCACCGTTGTGGCAGGGGTTTTTaGAACAGATATCCATTATCTCTTCCTCTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: SPRINHRCGRGF*NRYPLSLPLPL
Trigger: AAGAGGGAGAGGAAGAGATAATGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS CCA 72 bp AAACTGATGTCTTTTTCTCTATCAATCAGAATGCCCTaGGTCATGGGTTGGCAGACAGCAAACACCTGGGTG +
Preference number: 6 (lower is better)
Translates to: KLMSFSLSIRMP*VMGWQTANTWV
Trigger: CACCCAGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAAAGACATCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559259.1
CDS CAA 72 bp CGCACTTCTTGGGAAATCTCCTCGCATAAACCACCGTaGTGGCAGGGGTTTTTGGAACAGATATCCATTATC +
Preference number: 6 (lower is better)
Translates to: RTSWEISSHKPP*WQGFLEQISII
Trigger: GATAATGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS CAA 90 bp CCAGCTCCACCACCACTATCACCCTCAACAGGTCACTGTGCCATTTaGAATCTCACTAGTCTCATCTCTAAAGTGGGACTATTGCTTATA +
Preference number: 6 (lower is better)
Translates to: PAPPPLSPSTGHCAI*NLTSLISKVGLLLI
Trigger: TATAAGCAATAGTCCCACTTTAGAGATGAGACTAGTGAGATTCAAAATGGCACAGTGACCTGTTGAGGGTGATAGTGGTGGTGGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS GCA 72 bp CCACAAATGTACAATGCCTGTACTGTGAATGGTGCCTaGTTAGCAATGACATCCTTGAGCAGTGTACAACCT +
Preference number: 6 (lower is better)
Translates to: PQMYNACTVNGA*LAMTSLSSVQP
Trigger: AGGTTGTACACTGCTCAAGGATGTCATTGCTAAGCAGGCACCATTCACAGTACAGGCATTGTACATTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS GCA 72 bp AACAGACAGATTCTCTGCCCTCGTAAAGCTGACATCTaGCAAACACACCTAACGCTACATGTTCTAGAAGCT +
Preference number: 6 (lower is better)
Translates to: NRQILCPRKADI*QTHLTLHVLEA
Trigger: AGCTTCTAGAACATGTAGCGTTAGGTGTGTTTGGCAGATGTCAGCTTTACGAGGGCAGAGAATCTGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559259.1
ENST00000559997.5
CDS CCA 72 bp CAGAGTTCCACAAATGTACAATGCCTGTACTGTGAATaGTGCCTGCTTAGCAATGACATCCTTGAGCAGTGT +
Preference number: 6 (lower is better)
Translates to: QSSTNVQCLYCE*CLLSNDILEQC
Trigger: ACACTGCTCAAGGATGTCATTGCTAAGCAGGCACCATTCACAGTACAGGCATTGTACATTTGTGGAACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CCA 72 bp AAACTGATGTCTTTTTCTCTATCAATCAGAATGCCCTaGGTCATGGGTTGGCAGACAGCAAACACCACACCT +
Preference number: 6 (lower is better)
Translates to: KLMSFSLSIRMP*VMGWQTANTTP
Trigger: AGGTGTGGTGTTTGCTGTCTGCCAACCCATGACCCAGGGCATTCTGATTGATAGAGAAAAAGACATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559997.5
CDS CCA 72 bp ACTTCTTGGGAAATCTCCTCGCATAAACCACCGTTGTaGCAGGGGTTTTTGGAACAGATATCCATTATCTCT +
Preference number: 6 (lower is better)
Translates to: TSWEISSHKPPL*QGFLEQISIIS
Trigger: AGAGATAATGGATATCTGTTCCAAAAACCCCTGCCACAACGGTGGTTTATGCGAGGAGATTTCCCAAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559143.1
CDS CAA 72 bp TTGAATCTCACTAGTCTCATCTCTAAAGTGGGACTATaGCTTATAAACCACAGAACATGGACACAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: LNLTSLISKVGL*LINHRTWTQSG
Trigger: CCCAGACTGTGTCCATGTTCTGTGGTTTATAAGCAATAGTCCCACTTTAGAGATGAGACTAGTGAGATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558352.5
CDS CAA 90 bp TGTGCCATTTTGAATCTCACTAGTCTCATCTCTAAAGTGGGACTATaGCTTATAAACCACAGAACATGGACACAGTCTGGGTTTCCCAAT +
Preference number: 6 (lower is better)
Translates to: CAILNLTSLISKVGL*LINHRTWTQSGFPN
Trigger: ATTGGGAAACCCAGACTGTGTCCATGTTCTGTGGTTTATAAGCAATAGTCCCACTTTAGAGATGAGACTAGTGAGATTCAAAATGGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558352.5