RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFF-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000236432

Ensembl transcript IDs: ENST00000396588.6, ENST00000433324.2, ENST00000437673.6, ENST00000439598.6, ENST00000606119.2, ENST00000656540.1, ENST00000656707.1, ENST00000656771.1, ENST00000657158.1, ENST00000657873.1, ENST00000658093.1, ENST00000658632.1, ENST00000660803.1, ENST00000662009.1, ENST00000665165.1, ENST00000665988.1, ENST00000666788.1, ENST00000668704.1, ENST00000669075.1, ENST00000670070.1, ENST00000671563.1

Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CCGTTCCAGTGCGTGGGCCACGCGTCCGCCCTTTTCCGCGTCACATaGCCACGAACACTCTTCCGCTACGGCTCCCAGAAGGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PFQCVGHASALFRVT*PRTLFRYGSQKGPA
Trigger: GGCTGGCCCCTTCTGGGAGCCGTAGCGGAAGAGTGTTCGTGGTCATGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000657158.1
ENST00000665988.1
ENST00000671563.1
CDS CCA 90 bp GAGCCAAGATCACACCACCGCACTCCAACCTGGGTGACAGACTCGTaGAGCCGTTCCAGTGCGTGGGCCACGCGTCCGCCCTTTTCCGCG +
Preference number: 5 (lower is better)
Translates to: EPRSHHRTPTWVTDS*SRSSAWATRPPFSA
Trigger: CGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGAGTCTGTCACCCAGGTTGGAGTGCGGTGGTGTGATCTTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000656771.1
ENST00000658093.1
ENST00000662009.1
ENST00000665988.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 90 bp GGGCCTCTTGCCTTCAACCCTGGTCTTTCCTCCTCCCCGGGACCTTaGGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCTTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GPLAFNPGLSSSPGP*VPEESEGEERLLQV
Trigger: CACCTGCAGAAGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTCAAGGTCCCGGGGAGGAGGAAAGACCAGGGTTGAAGGCAAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS CCA 90 bp GGTGGAGGTTGCAGGGAGCCAAGATCACACCACCGCACTCCAACCTaGGTGACAGACTCGTGGAGCCGTTCCAGTGCGTGGGCCACGCGT +
Preference number: 5 (lower is better)
Translates to: GGGCREPRSHHRTPT*VTDSWSRSSAWATR
Trigger: ACGCGTGGCCCACGCACTGGAACGGCTCCACGAGTCTGTCACCCAGGTTGGAGTGCGGTGGTGTGATCTTGGCTCCCTGCAACCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000606119.2
ENST00000656771.1
ENST00000658093.1
ENST00000662009.1
ENST00000665988.1
ENST00000670070.1
ENST00000671563.1
CDS CCA 90 bp CGCACTCCAACCTGGGTGACAGACTCGTGGAGCCGTTCCAGTGCGTaGGCCACGCGTCCGCCCTTTTCCGCGTCACATGACCACGAACAC +
Preference number: 5 (lower is better)
Translates to: RTPTWVTDSWSRSSA*ATRPPFSASHDHEH
Trigger: GTGTTCGTGGTCATGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGAGTCTGTCACCCAGGTTGGAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665988.1
ENST00000671563.1
CDS GCA 90 bp TGGGATCTGGGCCCAGGTGCTTGCGGCTCTCTCCCGAAGGTGTCATaGTCCCTCTGTGCCTGCTACACTCTGTCCAGGGGTCTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: WDLGPGACGSLPKVS*SLCACYTLSRGLCF
Trigger: GAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp CGGGACCTTGAGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCTTCTaGAGGTGTTTTTGGGCGAACCTCTTCACCTTGTGTGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: RDLESPRRARERSVF*RCFWANLFTLCGSA
Trigger: CGCCGAACCACACAAGGTGAAGAGGTTCGCCCAAAAACACCTGCAGAAGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTCAAGGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS GCA 90 bp GGAGAAGTGTTCTCCTTTATGAAGGCCTCTGCTACTTTCAGTGGCTaGCCCTGCCCTGACTCACAGGCTTGTGAGGGAAGGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GEVFSFMKASATFSG*PCPDSQACEGRGRG
Trigger: CCCCCTGCCCCTTCCCTCACAAGCCTGTGAGTCAGGGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAACACTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000396588.6
ENST00000437673.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp GGTGCTTGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTGCCTaGTACACTCTGTCCAGGGGTCTTTGCTTCCTACTTTCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: GACGSLPKVSCSLCA*YTLSRGLCFLLSLR
Trigger: GCGAAGGGAAAGTAGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp CCCAGGTGCTTGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTaGCTGCTACACTCTGTCCAGGGGTCTTTGCTTCCTACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PRCLRLSPEGVMLPL*LLHSVQGSLLPTFP
Trigger: AGGGAAAGTAGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp GAGTTCACAGGGCTAATGAAGCTAAAGCTGGGATCTGGGCCCAGGTaGTTGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: EFTGLMKLKLGSGPR*LRLSPEGVMLPLCL
Trigger: CAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAGCCCTGTGAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp GGAGCCAAGATCACACCACCGCACTCCAACCTGGGTGACAGACTCTaGGGTCACCTCGTTTCGCCCACAACAAAGATGTCTGCGCATCGC +
Preference number: 5 (lower is better)
Translates to: GAKITPPHSNLGDRL*GHLVSPTTKMSAHR
Trigger: GCGATGCGCAGACATCTTTGTTGTGGGCGAAACGAGGTGACCGCAGAGTCTGTCACCCAGGTTGGAGTGCGGTGGTGTGATCTTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 90 bp CCTGACAACTTCTCCTTTATGAAGGCCTCTGCTACTTTCAGTGGCTaGCCCTGCCCTGACTCACAGGCTTGTGAGGGAAGGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PDNFSFMKASATFSG*PCPDSQACEGRGRG
Trigger: CCCCCTGCCCCTTCCCTCACAAGCCTGTGAGTCAGGGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAAGTTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 90 bp GGTGGAGGTTGCAGGGAGCCAAGATCACACCACCGCACTCCAACCTaGGTGACAGACTCTGCGGTCACCTCGTTTCGCCCACAACAAAGA +
Preference number: 5 (lower is better)
Translates to: GGGCREPRSHHRTPT*VTDSAVTSFRPQQR
Trigger: TCTTTGTTGTGGGCGAAACGAGGTGACCGCAGAGTCTGTCACCCAGGTTGGAGTGCGGTGGTGTGATCTTGGCTCCCTGCAACCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 90 bp GGCAGGGATCCTTTGTCCCCTCAGATCCCACTCACTTCTCCTTTATaGAGGCCTCTGCTACTTTCAGTGGCTGCCCCTGCCCTGACTCAC +
Preference number: 5 (lower is better)
Translates to: GRDPLSPQIPLTSPL*RPLLLSVAAPALTH
Trigger: GTGAGTCAGGGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAAGTGAGTGGGATCTGAGGGGACAAAGGATCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 90 bp CTGACATACAGAGTTCACAGGGCTAATGAAGCTAAAGCTGGGATCTaGGCCCAGGTGCTTGCGGCTCTCTCCCGAAGGTGTCATGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTYRVHRANEAKAGI*AQVLAALSRRCHAP
Trigger: GGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAGCCCTGTGAACTCTGTATGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp TGCATTCAAAACCTGCTCAGTAGGGTGTTAACCAGCTGTGAACGGTaGCAACTCCCCCTGCTATTAAACCAGGCTGGGCTGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: CIQNLLSRVLTSCER*QLPLLLNQAGLGWA
Trigger: AGCCCAGCCCAGCCCAGCCTGGTTTAATAGCAGGGGGAGTTGGCACCGTTCACAGCTGGTTAACACCCTACTGAGCAGGTTTTGAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 90 bp GGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATGATGGCAACATaGAGAAGTGCCTCCACGCCTGCATCCCCTGACTGCGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GRSRSKHVLLHMMAT*RSASTPASPDCGAV
Trigger: GACAGCACCGCAGTCAGGGGATGCAGGCGTGGAGGCACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 90 bp TTTTCCCTTGGGTTCAGTGCTGTTTCTTGGGATGACCCTCCTCATTaGGACTTGTTCTTCTTCCAGGGCACCCCAGGCAATACCGGGCCT +
Preference number: 5 (lower is better)
Translates to: FSLGFSAVSWDDPPH*DLFFFQGTPGNTGP
Trigger: AGGCCCGGTATTGCCTGGGGTGCCCTGGAAGAAGAACAAGTCTCAATGAGGAGGGTCATCCCAAGAAACAGCACTGAACCCAAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS TCA 90 bp GCCCTCTATGCGAACGGCTCTGTATGTCTTCTGCAGGAAACAGAGTaGGCAGCACTCATAAGGTGCAGTCCCAGAATGTGTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ALYANGSVCLLQETE*AALIRCSPRMCLQD
Trigger: GTCCTGCAGACACATTCTGGGACTGCACCTTATGAGTGCTGCTCACTCTGTTTCCTGCAGAAGACATACAGAGCCGTTCGCATAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439598.6
ENST00000662009.1
ENST00000668704.1
CDS TCA 90 bp TCAACACTCGTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGCCTCCACGCCTGCATCCCCTGACT +
Preference number: 5 (lower is better)
Translates to: STLVAEAEANMSFFT*WQHGEVPPRLHPLT
Trigger: AGTCAGGGGATGCAGGCGTGGAGGCACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 90 bp GCAGGCTTTGTCCAGAGAGTGTCCTATTATCATCAAATGGGCCCCTaGAGTCATGGGAGGCAGCTAAGAGGACACTTTCCTCTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: AGFVQRVSYYHQMGP*SHGRQLRGHFPLPN
Trigger: GTTGGGGAGAGGAAAGTGTCCTCTTAGCTGCCTCCCATGACTTCAGGGGCCCATTTGATGATAATAGGACACTCTCTGGACAAAGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 90 bp GTTTGGTTGACAAATAAGGACAGTGAGGGCCAGTGTTTAGTTACCTaGCCATCACACAGCCGGTTGGTGGCTGAGCAGGCCTTAGAACTG +
Preference number: 5 (lower is better)
Translates to: VWLTNKDSEGQCLVT*PSHSRLVAEQALEL
Trigger: CAGTTCTAAGGCCTGCTCAGCCACCAACCGGCTGTGTGATGGGCAGGTAACTAAACACTGGCCCTCACTGTCCTTATTTGTCAACCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 90 bp CTACTCTATGCGAACGGCTCTGTATGTCTTCTGCAGGAAACAGAGTaGGCAGCACTCATAAGGTGCAGTCCCAGAATGTGTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLYANGSVCLLQETE*AALIRCSPRMCLQD
Trigger: GTCCTGCAGACACATTCTGGGACTGCACCTTATGAGTGCTGCTCACTCTGTTTCCTGCAGAAGACATACAGAGCCGTTCGCATAGAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000660803.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 90 bp TGTCCTTCTTCACATGATGGCAACATGGAGAAGTGTTCTCCTTTATaGAGGCCTCTGCTACTTTCAGTGGCTGCCCCTGCCCTGACTCAC +
Preference number: 5 (lower is better)
Translates to: CPSSHDGNMEKCSPL*RPLLLSVAAPALTH
Trigger: GTGAGTCAGGGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAACACTTCTCCATGTTGCCATCATGTGAAGAAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000396588.6
ENST00000437673.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 90 bp GGTTCTCACATTCAGTGCGCCAAGCAAGGCTGTCGTGAATGGTCATaGAGGTTAAACAAAACGGCACATGGTGGCAAAAGGGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: GSHIQCAKQGCREWS*RLNKTAHGGKRVMR
Trigger: CCTCATGACCCTTTTGCCACCATGTGCCGTTTTGTTTAACCTGCATGACCATTCACGACAGCCTTGCTTGGCGCACTGAATGTGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CCA 90 bp TCTATTTGGTCCCTGGAAGGCACTAGTGATGCCCATGATGGGCTATaGAAGAGAAGAAAAGCTTTGTCTAAGCAGCCCAGGCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SIWSLEGTSDAHDGL*KRRKALSKQPRPKV
Trigger: CACCTTGGGCCTGGGCTGCTTAGACAAAGCTTTTCTTCTCTTCCATAGCCCATCATGGGCATCACTAGTGCCTTCCAGGGACCAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CCA 90 bp AGAATTAAGGACCTGATGTTGTTACTCCTGTCTGTTAGGGAGCCCTaGAATTCCAGGAGTAAAGGGCCAGAGAGGAACCCCAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: RIKDLMLLLLSVREP*NSRSKGPERNPRSQ
Trigger: TTGGCTCCTGGGGTTCCTCTCTGGCCCTTTACTCCTGGAATTCCAGGGCTCCCTAACAGACAGGAGTAACAACATCAGGTCCTTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 90 bp AAATCAGTGCATCTTTTCCCTTGGGTTCAGTGCTGTTTCTTGGGATaGCCCTCCTCATTGAGACTTGTTCTTCTTCCAGGGCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: KSVHLFPWVQCCFLG*PSSLRLVLLPGHPR
Trigger: CCTGGGGTGCCCTGGAAGAAGAACAAGTCTCAATGAGGAGGGTCATCCCAAGAAACAGCACTGAACCCAAGGGAAAAGATGCACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS GCA 90 bp GTAACAGCTAGCACACCCTACTCAATCTCAAAGCCAAACCTGGTCTaGTTCTTCATGTGGGTCACTGTTAGGCACCTCTCTGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: VTASTPYSISKPNLV*FFMWVTVRHLSGTH
Trigger: GTGAGTTCCAGAGAGGTGCCTAACAGTGACCCACATGAAGAAGCAGACCAGGTTTGGCTTTGAGATTGAGTAGGGTGTGCTAGCTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CCA 90 bp TCACAGTTCAGCACGGCTGGGGAGTCCTCAGTAAACTTACACTCGTaGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATGATGGCAAC +
Preference number: 5 (lower is better)
Translates to: SQFSTAGESSVNLHS*QKQKQTCPSSHDGN
Trigger: GTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTAAGTTTACTGAGGACTCCCCAGCCGTGCTGAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433324.2
CDS CCA 90 bp CAACAGTTCAGCACGGCTGGGGAGTCCTCAGTAAACTTACACTCGTaGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATGATGGCAAC +
Preference number: 5 (lower is better)
Translates to: QQFSTAGESSVNLHS*QKQKQTCPSSHDGN
Trigger: GTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTAAGTTTACTGAGGACTCCCCAGCCGTGCTGAACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000437673.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000662009.1
ENST00000665988.1
CDS CCA 90 bp TGTCCAGAGAGTGTCCTATTATCATCAAATGGGCCCCTGAAGTCATaGGAGGCAGCTAAGAGGACACTTTCCTCTCCCCAACACTGTGAA +
Preference number: 5 (lower is better)
Translates to: CPESVLLSSNGPLKS*EAAKRTLSSPQHCE
Trigger: TTCACAGTGTTGGGGAGAGGAAAGTGTCCTCTTAGCTGCCTCCCATGACTTCAGGGGCCCATTTGATGATAATAGGACACTCTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 90 bp AACAGTGGTTCTCACATTCAGTGCGCCAAGCAAGGCTGTCGTGAATaGTCATGCAGGTTAAACAAAACGGCACATGGTGGCAAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: NSGSHIQCAKQGCRE*SCRLNKTAHGGKRV
Trigger: GACCCTTTTGCCACCATGTGCCGTTTTGTTTAACCTGCATGACCATTCACGACAGCCTTGCTTGGCGCACTGAATGTGAGAACCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS TCA 90 bp GCTCTGTGTAGCAGGCAGTGCTCCCCTTCCCAGTGGACATGTATTTaGTGTCAGCTCCTAACTGCAGAGCAGCCACATTTTATATTCTGT +
Preference number: 5 (lower is better)
Translates to: ALCSRQCSPSQWTCI*CQLLTAEQPHFIFC
Trigger: ACAGAATATAAAATGTGGCTGCTCTGCAGTTAGGAGCTGACATCAAATACATGTCCACTGGGAAGGGGAGCACTGCCTGCTACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CCA 90 bp TTATATCCCAGGGCCTCCCGGTCTCCCAGGATTGCCAGGGTTACATaGTGTAAAAGGAATCCCAGGTACAAACAATTTGCATGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: LYPRASRSPRIARVT*CKRNPRYKQFACKC
Trigger: ACACTTGCATGCAAATTGTTTGTACCTGGGATTCCTTTTACACCATGTAACCCTGGCAATCCTGGGAGACCGGGAGGCCCTGGGATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 90 bp GTGAGACAACAAGGGATGAAGAAGTCAACTTCTCCTCCCTCCACCTaGGCCCGGGTTATGACAACGTGTTTAATACATGGTCAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: VRQQGMKKSTSPPST*ARVMTTCLIHGQQK
Trigger: TTTTTGCTGACCATGTATTAAACACGTTGTCATAACCCGGGCCCAGGTGGAGGGAGGAGAAGTTGACTTCTTCATCCCTTGTTGTCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS TCA 90 bp TCAACACTCGTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGTTCTCCTTTATGAAGGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: STLVAEAEANMSFFT*WQHGEVFSFMKASA
Trigger: AGCAGAGGCCTTCATAAAGGAGAACACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000665165.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 90 bp CTTACACTCGTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGTTCTCCTTTATGAAGGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LTLVAEAEANMSFFT*WQHGEVFSFMKASA
Trigger: AGCAGAGGCCTTCATAAAGGAGAACACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000437673.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000662009.1
ENST00000665988.1
CDS TCA 90 bp CTTACACTCGTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGCTTGGTATGAGTAGAAGAGCAACT +
Preference number: 5 (lower is better)
Translates to: LTLVAEAEANMSFFT*WQHGEVLGMSRRAT
Trigger: AGTTGCTCTTCTACTCATACCAAGCACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606119.2
CDS TCA 90 bp GTTGTCAAACCAGGGCAGAAAATAGCTGGTCACTATGTGTCCCTTTaGCCACGGGTAAATATTTCTATTTGGTCCCTGGAAGGCACTAGT +
Preference number: 5 (lower is better)
Translates to: VVKPGQKIAGHYVSL*PRVNISIWSLEGTS
Trigger: ACTAGTGCCTTCCAGGGACCAAATAGAAATATTTACCCGTGGTCAAAGGGACACATAGTGACCAGCTATTTTCTGCCCTGGTTTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS TCA 90 bp CGTTCTTGTGATGTCTTTGGTGTTGGTGTCAGAGTAATGCTGGTCTaGTGGAACAAGCTGGGAAGTGTTTCCTCCTCTTGTATTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RSCDVFGVGVRVMLV*WNKLGSVSSSCIFW
Trigger: CCAGAAAATACAAGAGGAGGAAACACTTCCCAGCTTGTTCCATCAGACCAGCATTACTCTGACACCAACACCAAAGACATCACAAGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS GCA 90 bp ACCTGGATAGGGAACATTATACATTATCACTGTCCAGTAGCCATTTaGATTGGCATAGGGTCTTCTGGGAGACTGGGTCTCAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: TWIGNIIHYHCPVAI*IGIGSSGRLGLNPK
Trigger: CTTTGGATTGAGACCCAGTCTCCCAGAAGACCCTATGCCAATGCAAATGGCTACTGGACAGTGATAATGTATAATGTTCCCTATCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 90 bp CCCACAATTCCTTTATCCATTGCTTTGTCACTGTCTCTGTGCTCCTaGAGTCTCCTGTCTTCCCTCATTGATGACCTTTATTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: PTIPLSIALSLSLCS*SLLSSLIDDLYFMV
Trigger: GACCATGAAATAAAGGTCATCAATGAGGGAAGACAGGAGACTCCAGGAGCACAGAGACAGTGACAAAGCAATGGATAAAGGAATTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 90 bp AGGGATAGAATAGAAAGTGACTGGTCAGGGGCTGGGAGGATGGAATaGTCCAAAACTTCCACATATGCTATCCTCATCCATGAATATGAT +
Preference number: 5 (lower is better)
Translates to: RDRIESDWSGAGRME*SKTSTYAILIHEYD
Trigger: ATCATATTCATGGATGAGGATAGCATATGTGGAAGTTTTGGAGCATTCCATCCTCCCAGCCCCTGACCAGTCACTTTCTATTCTATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CCA 90 bp GCAATCAGATGGTTCCTTCTTTGGTCTTCTTGCTCCAAAGATAGCTaGTTCAAGGCCAGTTTTATCCTTGGCACTTTTCATGACCTTGGT +
Preference number: 5 (lower is better)
Translates to: AIRWFLLWSSCSKDS*FKASFILGTFHDLG
Trigger: ACCAAGGTCATGAAAAGTGCCAAGGATAAAACTGGCCTTGAACCAGCTATCTTTGGAGCAAGAAGACCAAAGAAGGAACCATCTGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396588.6
CDS CCA 90 bp TCAGAGCTGATTCTCAGGCTAATAAATTATCCAGGCAAATCCGTTTaGTTGACAAATAAGGACAGTGAGGGCCAGTGTTTAGTTACCTGC +
Preference number: 5 (lower is better)
Translates to: SELILRLINYPGKSV*LTNKDSEGQCLVTC
Trigger: GCAGGTAACTAAACACTGGCCCTCACTGTCCTTATTTGTCAACCAAACGGATTTGCCTGGATAATTTATTAGCCTGAGAATCAGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 90 bp GCTGCTTCACAAAGCCAACCTGGTCTTATGCTAGTAAGTAAAAGATaGCTATTTGTGTGCTCATTACACAGGGTCTTGCATGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: AASQSQPGLMLVSKR*LFVCSLHRVLHAFL
Trigger: CAGAAATGCATGCAAGACCCTGTGTAATGAGCACACAAATAGTCATCTTTTACTTACTAGCATAAGACCAGGTTGGCTTTGTGAAGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS TCA 90 bp CACAGGTTTTCCATTTCTGATCATCTCACACAGCACATTATCCTCTaGGTTTTTGTAGTGTGCTGCTTCACAAAGCCAACCTGGTCTTAT +
Preference number: 5 (lower is better)
Translates to: HRFSISDHLTQHIIL*VFVVCCFTKPTWSY
Trigger: ATAAGACCAGGTTGGCTTTGTGAAGCAGCACACTACAAAAACTCAGAGGATAATGTGCTGTGTGAGATGATCAGAAATGGAAAACCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CCA 90 bp AGCACAAAAGGGTCAATACACTGGAAGAAAATAAAGGCATTGGATTaGTGGATGTCACAACGTGGTTTAGATGAACTTGGAGGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: STKGSIHWKKIKALD*WMSQRGLDELGGRV
Trigger: AACTCTCCCTCCAAGTTCATCTAAACCACGTTGTGACATCCACCAATCCAATGCCTTTATTTTCTTCCAGTGTATTGACCCTTTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 90 bp GGGGACAAAGGAGAACCAGGTCTCAAAGGTAAAGAATTGCTTGTTTaGAATCAGGACATCAGAGCTGATTCTCAGGCTAATAAATTATCC +
Preference number: 5 (lower is better)
Translates to: GDKGEPGLKGKELLV*NQDIRADSQANKLS
Trigger: GGATAATTTATTAGCCTGAGAATCAGCTCTGATGTCCTGATTCCAAACAAGCAATTCTTTACCTTTGAGACCTGGTTCTCCTTTGTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 90 bp TTACCTTGTCCAGCACAAAGGAATTATCAACACCTGTACATGTCATaGAATTACCATTGCAGTGGTCTCATCTTCTTCTTGACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LPCPAQRNYQHLYMS*NYHCSGLIFFLTSV
Trigger: GACAGAGGTCAAGAAGAAGATGAGACCACTGCAATGGTAATTTCATGACATGTACAGGTGTTGATAATTCCTTTGTGCTGGACAAGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 90 bp GTAGCATTCCATGGTATATATACCACATTGTCTTTATCCACTCATTaGTTGATGGGCATCTGGGCTGGTTCCAGATTTTTGCAATTGCGA +
Preference number: 5 (lower is better)
Translates to: VAFHGIYTTLSLSTH*LMGIWAGSRFLQLR
Trigger: TCGCAATTGCAAAAATCTGGAACCAGCCCAGATGCCCATCAATCAATGAGTGGATAAAGACAATGTGGTATATATACCATGGAATGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000665988.1
ENST00000670070.1
CDS CCA 90 bp ACAAAAGGGTCAATACACTGGAAGAAAATAAAGGCATTGGATTGGTaGATGTCACAACGTGGTTTAGATGAACTTGGAGGGAGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TKGSIHWKKIKALDW*MSQRGLDELGGRVS
Trigger: TGAAACTCTCCCTCCAAGTTCATCTAAACCACGTTGTGACATCCACCAATCCAATGCCTTTATTTTCTTCCAGTGTATTGACCCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 90 bp TTTTGCATTTATATTGAGAAGGGATATTGGTCTGTAGCGTTCTTGTaGTGTCTTTGGTGTTGGTGTCAGAGTAATGCTGGTCTGATGGAA +
Preference number: 5 (lower is better)
Translates to: FCIYIEKGYWSVAFL*CLWCWCQSNAGLME
Trigger: TTCCATCAGACCAGCATTACTCTGACACCAACACCAAAGACATCACAAGAACGCTACAGACCAATATCCCTTCTCAATATAAATGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 90 bp TTCCCACTGCTAAGTGAGAATATGCGACGTTTAGTTTTCTATTCCTaGGTTACTTCACTTAGAATAATGGTCTCCAATTCCATCCAGGTT +
Preference number: 5 (lower is better)
Translates to: FPLLSENMRRLVFYS*VTSLRIMVSNSIQV
Trigger: AACCTGGATGGAATTGGAGACCATTATTCTAAGTGAAGTAACTCAGGAATAGAAAACTAAACGTCGCATATTCTCACTTAGCAGTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670070.1
CDS TCA 90 bp ATGGCTAGCTGCTCTCACCTCTTTTCTCCTTGCATTTCAGTACCTTaGTCCCTGATACAAAGAATCTTAATTCAATTTATAAGAAGCTAC +
Preference number: 5 (lower is better)
Translates to: MASCSHLFSPCISVP*SLIQRILIQFIRSY
Trigger: GTAGCTTCTTATAAATTGAATTAAGATTCTTTGTATCAGGGATCAAGGTACTGAAATGCAAGGAGAAAAGAGGTGAGAGCAGCTAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS GCA 72 bp CGTCTTCCCGACCCGCGACCTGCCGCCCGAGCTGGCTaGCAGGCCTATCGCCGCCGCCGAGACCCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: RLPDPRPAARAG*QAYRRRRDPPA
Trigger: GGCCGGAGGGTCTCGGCGGCGGCGATAGGCCTGGCAGCCAGCTCGGGCGGCAGGTCGCGGGTCGGGAAGACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS CCA 72 bp TTGACGTCTTCCCGACCCGCGACCTGCCGCCCGAGCTaGCTGCCAGGCCTATCGCCGCCGCCGAGACCCTCC +
Preference number: 6 (lower is better)
Translates to: LTSSRPATCRPS*LPGLSPPPRPS
Trigger: GGAGGGTCTCGGCGGCGGCGATAGGCCTGGCAGCCAGCTCGGGCGGCAGGTCGCGGGTCGGGAAGACGTCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS TCA 72 bp ACTGACTGGGTTCCTCTGCCCCTCGGGCCACTCCCCTaGCTACACAGGGCCTCTCTCTCCCTCGCTACCACC +
Preference number: 6 (lower is better)
Translates to: TDWVPLPLGPLP*LHRASLSLATT
Trigger: GGTGGTAGCGAGGGAGAGAGAGGCCCTGTGTAGTCAGGGGAGTGGCCCGAGGGGCAGAGGAACCCAGTCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp GGCAACATGGAGAAGTGCCTCCACGCCTGCATCCCCTaGCTGCGGTGCTGTCGCCTGTCTCCTAGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GNMEKCLHACIP*LRCCRLSPRGL
Trigger: CAGCCCCCTAGGAGACAGGCGACAGCACCGCAGTCAGGGGATGCAGGCGTGGAGGCACTTCTCCATGTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 72 bp TCCAACCTGGGTGACAGACTCGTGGAGCCGTTCCAGTaGGTGGGCCACGCGTCCGCCCTTTTCCGCGTCACA +
Preference number: 6 (lower is better)
Translates to: SNLGDRLVEPFQ*VGHASALFRVT
Trigger: TGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGAGTCTGTCACCCAGGTTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000656771.1
ENST00000662009.1
ENST00000665988.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 72 bp CCCAGAATGTGTCTGCAGGACGTGGAGCCGTTCCAGTaGGTGGGCCACGCGTCCGCCCTTTTCCGCGTCACA +
Preference number: 6 (lower is better)
Translates to: PRMCLQDVEPFQ*VGHASALFRVT
Trigger: TGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGTCCTGCAGACACATTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657158.1
ENST00000660803.1
CDS CCA 72 bp ACCTGGGTGACAGACTCGTGGAGCCGTTCCAGTGCGTaGGCCACGCGTCCGCCCTTTTCCGCGTCACATGAC +
Preference number: 6 (lower is better)
Translates to: TWVTDSWSRSSA*ATRPPFSASHD
Trigger: GTCATGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGAGTCTGTCACCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000656771.1
ENST00000662009.1
ENST00000665988.1
ENST00000670070.1
ENST00000671563.1
CDS CAA 90 bp CGGGCCTCTTGCCTTCAACCCTGGTCTTTCCTCCTCCCCGGGACCTaGAGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCTTCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: RASCLQPWSFLLPGT*SPRGERGRGASSAG
Trigger: ACCTGCAGAAGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTCAAGGTCCCGGGGAGGAGGAAAGACCAGGGTTGAAGGCAAGAGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS TCA 72 bp GCCTTCAACCCTGGTCTTTCCTCCTCCCCGGGACCTTaGGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCTT +
Preference number: 6 (lower is better)
Translates to: AFNPGLSSSPGP*VPEESEGEERL
Trigger: AAGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTCAAGGTCCCGGGGAGGAGGAAAGACCAGGGTTGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS TCA 72 bp TGCGTGGGCCACGCGTCCGCCCTTTTCCGCGTCACATaGCCACGAACACTCTTCCGCTACGGCTCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: CVGHASALFRVT*PRTLFRYGSQK
Trigger: CTTCTGGGAGCCGTAGCGGAAGAGTGTTCGTGGTCATGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000657158.1
ENST00000665988.1
ENST00000671563.1
CDS CCA 72 bp GAATGTGTCTGCAGGACGTGGAGCCGTTCCAGTGCGTaGGCCACGCGTCCGCCCTTTTCCGCGTCACATGAC +
Preference number: 6 (lower is better)
Translates to: ECVCRTWSRSSA*ATRPPFSASHD
Trigger: GTCATGTGACGCGGAAAAGGGCGGACGCGTGGCCCACGCACTGGAACGGCTCCACGTCCTGCAGACACATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000657158.1
ENST00000660803.1
CDS CAA 72 bp TGCCTTCAACCCTGGTCTTTCCTCCTCCCCGGGACCTaGAGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCT +
Preference number: 6 (lower is better)
Translates to: CLQPWSFLLPGT*SPRGERGRGAS
Trigger: AGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTCAAGGTCCCGGGGAGGAGGAAAGACCAGGGTTGAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS GCA 72 bp ACATGGAGAAGTGCCTCCACGCCTGCATCCCCTGACTaGGGTGCTGTCGCCTGTCTCCTAGGGGGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: TWRSASTPASPD*GAVACLLGGCF
Trigger: AAAGCAGCCCCCTAGGAGACAGGCGACAGCACCGCAGTCAGGGGATGCAGGCGTGGAGGCACTTCTCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 72 bp GGGCTAATGAAGCTAAAGCTGGGATCTGGGCCCAGGTaGTTGCGGCTCTCTCCCGAAGGTGTCATGCTCCCT +
Preference number: 6 (lower is better)
Translates to: GLMKLKLGSGPR*LRLSPEGVMLP
Trigger: AGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 72 bp CCACACCACACGGTTACTCCCGGCTGTCACCACCTCTaGTTTCGACCTCCCCGTCTTCAGTCACAGAACTGC +
Preference number: 6 (lower is better)
Translates to: PHHTVTPGCHHL*FRPPRLQSQNC
Trigger: GCAGTTCTGTGACTGAAGACGGGGAGGTCGAAAGCAGAGGTGGTGACAGCCGGGAGTAACCGTGTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 90 bp TTCACAGGGCTAATGAAGCTAAAGCTGGGATCTGGGCCCAGGTGCTaGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTGCCTGCTA +
Preference number: 6 (lower is better)
Translates to: FTGLMKLKLGSGPRC*RLSPEGVMLPLCLL
Trigger: TAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAGCCCTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 72 bp TTGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTaGCTGCTACACTCTGTCCAGGGGTCTTTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LRLSPEGVMLPL*LLHSVQGSLLP
Trigger: AGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 72 bp GAGTCCCCGAGGAGAGCGAGGGAGAGGAGCGTCTTCTaGAGGTGTTTTTGGGCGAACCTCTTCACCTTGTGT +
Preference number: 6 (lower is better)
Translates to: ESPRRARERSVF*RCFWANLFTLC
Trigger: ACACAAGGTGAAGAGGTTCGCCCAAAAACACCTGCAGAAGACGCTCCTCTCCCTCGCTCTCCTCGGGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS CCA 72 bp CTAATGGCGGCAGCCGTGAACACTGTGGTCAGCCACTaGATGACATGCACTTGGGCAGGGATCCTTTGTCCC +
Preference number: 6 (lower is better)
Translates to: LMAAAVNTVVSH*MTCTWAGILCP
Trigger: GGGACAAAGGATCCCTGCCCAAGTGCATGTCATCCAGTGGCTGACCACAGTGTTCACGGCTGCCGCCATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 72 bp CTAATGAAGCTAAAGCTGGGATCTGGGCCCAGGTGCTaGCGGCTCTCTCCCGAAGGTGTCATGCTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LMKLKLGSGPRC*RLSPEGVMLPL
Trigger: CAGAGGGAGCATGACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS CAA 72 bp GAGAGCGAGGGAGAGGAGCGTCTTCTGCAGGTGTTTTaGGGCGAACCTCTTCACCTTGTGTGGTTCGGCGTC +
Preference number: 6 (lower is better)
Translates to: ESEGEERLLQVF*GEPLHLVWFGV
Trigger: GACGCCGAACCACACAAGGTGAAGAGGTTCGCCCAAAAACACCTGCAGAAGACGCTCCTCTCCCTCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665988.1
CDS GCA 72 bp GGCTCTCTCCCGAAGGTGTCATGCTCCCTCTGTGCCTaGTACACTCTGTCCAGGGGTCTTTGCTTCCTACTT +
Preference number: 6 (lower is better)
Translates to: GSLPKVSCSLCA*YTLSRGLCFLL
Trigger: AAGTAGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACCTTCGGGAGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS CCA 72 bp AGAGTTCACAGGGCTAATGAAGCTAAAGCTGGGATCTaGGCCCAGGTGCTTGCGGCTCTCTCCCGAAGGTGT +
Preference number: 6 (lower is better)
Translates to: RVHRANEAKAGI*AQVLAALSRRC
Trigger: ACACCTTCGGGAGAGAGCCGCAAGCACCTGGGCCCAGATCCCAGCTTTAGCTTCATTAGCCCTGTGAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS GCA 72 bp TTCTCCTTTATGAAGGCCTCTGCTACTTTCAGTGGCTaGCCCTGCCCTGACTCACAGGCTTGTGAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: FSFMKASATFSG*PCPDSQACEGR
Trigger: CCTTCCCTCACAAGCCTGTGAGTCAGGGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS CAA 72 bp TGCCCTTATATCCCAGGGCCTCCCGGTCTCCCAGGATaGCCAGGGTTACATGGTGTAAAAGGAATCCCAGGT +
Preference number: 6 (lower is better)
Translates to: CPYIPGPPGLPG*PGLHGVKGIPG
Trigger: ACCTGGGATTCCTTTTACACCATGTAACCCTGGCAATCCTGGGAGACCGGGAGGCCCTGGGATATAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 72 bp GGCCAGTGTTTAGTTACCTGCCCATCACACAGCCGGTaGGTGGCTGAGCAGGCCTTAGAACTGAGTCACCTT +
Preference number: 6 (lower is better)
Translates to: GQCLVTCPSHSR*VAEQALELSHL
Trigger: AAGGTGACTCAGTTCTAAGGCCTGCTCAGCCACCAACCGGCTGTGTGATGGGCAGGTAACTAAACACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CAA 90 bp GGTGTCATGCTCCCTCTGTGCCTGCTACACTCTGTCCAGGGGTCTTaGCTTCCTACTTTCCCTTCGCTAAGCAACACCCATCTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GVMLPLCLLHSVQGS*LPTFPSLSNTHLSF
Trigger: GAAGGACAGATGGGTGTTGCTTAGCGAAGGGAAAGTAGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAGCATGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 72 bp GAAGAAAAGCTTTGTCTAAGCAGCCCAGGCCCAAGGTaGTCCTGCCCCTTCAGGGTAGAGGACAGTGAGACA +
Preference number: 6 (lower is better)
Translates to: EEKLCLSSPGPR*SCPFRVEDSET
Trigger: TGTCTCACTGTCCTCTACCCTGAAGGGGCAGGATCACCTTGGGCCTGGGCTGCTTAGACAAAGCTTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS TCA 72 bp CAGGGGCCATGGTGCAGGGAAACGGTGGCGGCAGGATaGACAATTACCCAGAATGTGGCTATTTTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: QGPWCRETVAAG*TITQNVAIFAV
Trigger: CACAGCAAAAATAGCCACATTCTGGGTAATTGTTCATCCTGCCGCCACCGTTTCCCTGCACCATGGCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CAA 72 bp CTCCCTCTGTGCCTGCTACACTCTGTCCAGGGGTCTTaGCTTCCTACTTTCCCTTCGCTAAGCAACACCCAT +
Preference number: 6 (lower is better)
Translates to: LPLCLLHSVQGS*LPTFPSLSNTH
Trigger: ATGGGTGTTGCTTAGCGAAGGGAAAGTAGGAAGCAAAGACCCCTGGACAGAGTGTAGCAGGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS CAA 72 bp CAAACTGAGGGTACATTTGAACGGGCCAGCGGGCACTaGGCTGCAGCCCATTGTTACTGTGCAACATGTCAG +
Preference number: 6 (lower is better)
Translates to: QTEGTFERASGH*AAAHCYCATCQ
Trigger: CTGACATGTTGCACAGTAACAATGGGCTGCAGCCAAGTGCCCGCTGGCCCGTTCAAATGTACCCTCAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp GGGTTCAGTGCTGTTTCTTGGGATGACCCTCCTCATTaGGACTTGTTCTTCTTCCAGGGCACCCCAGGCAAT +
Preference number: 6 (lower is better)
Translates to: GFSAVSWDDPPH*DLFFFQGTPGN
Trigger: ATTGCCTGGGGTGCCCTGGAAGAAGAACAAGTCTCAATGAGGAGGGTCATCCCAAGAAACAGCACTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS CCA 72 bp AGAAGCAAACATGTCCTTCTTCACATGATGGCAACATaGAGAAGTGCCTCCACGCCTGCATCCCCTGACTGC +
Preference number: 6 (lower is better)
Translates to: RSKHVLLHMMAT*RSASTPASPDC
Trigger: GCAGTCAGGGGATGCAGGCGTGGAGGCACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CAA 72 bp ATCAAGATGCTGACCCTTGGTCTGGTGAGGGCTTTTTaGGCTGCATCCTCACATGGCAGAAAGCAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: IKMLTLGLVRAF*AASSHGRKQKG
Trigger: GCCCTTCTGCTTTCTGCCATGTGAGGATGCAGCCAAAAAAGCCCTCACCAGACCAAGGGTCAGCATCTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000656540.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
CDS CAA 90 bp TGTACACAGTGCCCTTATATCCCAGGGCCTCCCGGTCTCCCAGGATaGCCAGGGTTACATGGTGTAAAAGGAATCCCAGGTACAAACAAT +
Preference number: 6 (lower is better)
Translates to: CTQCPYIPGPPGLPG*PGLHGVKGIPGTNN
Trigger: ATTGTTTGTACCTGGGATTCCTTTTACACCATGTAACCCTGGCAATCCTGGGAGACCGGGAGGCCCTGGGATATAAGGGCACTGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 90 bp AAGTCCAAAATCAAGATGCTGACCCTTGGTCTGGTGAGGGCTTTTTaGGCTGCATCCTCACATGGCAGAAAGCAGAAGGGCAAGCTGACC +
Preference number: 6 (lower is better)
Translates to: KSKIKMLTLGLVRAF*AASSHGRKQKGKLT
Trigger: GGTCAGCTTGCCCTTCTGCTTTCTGCCATGTGAGGATGCAGCCAAAAAAGCCCTCACCAGACCAAGGGTCAGCATCTTGATTTTGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000656540.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
CDS TCA 72 bp GCGAACGGCTCTGTATGTCTTCTGCAGGAAACAGAGTaGGCAGCACTCATAAGGTGCAGTCCCAGAATGTGT +
Preference number: 6 (lower is better)
Translates to: ANGSVCLLQETE*AALIRCSPRMC
Trigger: ACACATTCTGGGACTGCACCTTATGAGTGCTGCTCACTCTGTTTCCTGCAGAAGACATACAGAGCCGTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000439598.6
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000660803.1
ENST00000662009.1
ENST00000666788.1
ENST00000668704.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 72 bp TCACATGATGGCAACATGGAGAAGTGTTCTCCTTTATaGAGGCCTCTGCTACTTTCAGTGGCTGCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: SHDGNMEKCSPL*RPLLLSVAAPA
Trigger: GGCAGGGGCAGCCACTGAAAGTAGCAGAGGCCTTCATAAAGGAGAACACTTCTCCATGTTGCCATCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000396588.6
ENST00000437673.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 72 bp AGCAGGCAGTGCTCCCCTTCCCAGTGGACATGTATTTaGTGTCAGCTCCTAACTGCAGAGCAGCCACATTTT +
Preference number: 6 (lower is better)
Translates to: SRQCSPSQWTCI*CQLLTAEQPHF
Trigger: AAAATGTGGCTGCTCTGCAGTTAGGAGCTGACATCAAATACATGTCCACTGGGAAGGGGAGCACTGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CCA 72 bp TCTCACATTCAGTGCGCCAAGCAAGGCTGTCGTGAATaGTCATGCAGGTTAAACAAAACGGCACATGGTGGC +
Preference number: 6 (lower is better)
Translates to: SHIQCAKQGCRE*SCRLNKTAHGG
Trigger: GCCACCATGTGCCGTTTTGTTTAACCTGCATGACCATTCACGACAGCCTTGCTTGGCGCACTGAATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CCA 72 bp CCCATCACCCAAACAGTGTACACTGTACCCAGTGTGTaGTCTTTAATCCCTCACCCCCTTTTACACTTCCCC +
Preference number: 6 (lower is better)
Translates to: PITQTVYTVPSV*SLIPHPLLHFP
Trigger: GGGGAAGTGTAAAAGGGGGTGAGGGATTAAAGACCACACACTGGGTACAGTGTACACTGTTTGGGTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670070.1
CDS CCA 72 bp CAGCTAGCACACCCTACTCAATCTCAAAGCCAAACCTaGTCTGCTTCTTCATGTGGGTCACTGTTAGGCACC +
Preference number: 6 (lower is better)
Translates to: QLAHPTQSQSQT*SASSCGSLLGT
Trigger: GGTGCCTAACAGTGACCCACATGAAGAAGCAGACCAGGTTTGGCTTTGAGATTGAGTAGGGTGTGCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CAA 72 bp TTGAGAGGTGAAGTTACAGAGCCCTTGGCCTGTGTGTaGGGCGCTGTTCTAAGGGTCTTATGTGCCTCCATT +
Preference number: 6 (lower is better)
Translates to: LRGEVTEPLACV*GAVLRVLCASI
Trigger: AATGGAGGCACATAAGACCCTTAGAACAGCGCCCAACACACAGGCCAAGGGCTCTGTAACTTCACCTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 90 bp GGACAAGAGAGTTGCAGAAATGCAATAAACAAACTGAGGGTACATTaGAACGGGCCAGCGGGCACTTGGCTGCAGCCCATTGTTACTGTG +
Preference number: 6 (lower is better)
Translates to: GQESCRNAINKLRVH*NGPAGTWLQPIVTV
Trigger: CACAGTAACAATGGGCTGCAGCCAAGTGCCCGCTGGCCCGTTCAAATGTACCCTCAGTTTGTTTATTGCATTTCTGCAACTCTCTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp GTCCAGAGAGTGTCCTATTATCATCAAATGGGCCCCTaGAGTCATGGGAGGCAGCTAAGAGGACACTTTCCT +
Preference number: 6 (lower is better)
Translates to: VQRVSYYHQMGP*SHGRQLRGHFP
Trigger: AGGAAAGTGTCCTCTTAGCTGCCTCCCATGACTTCAGGGGCCCATTTGATGATAATAGGACACTCTCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 72 bp TGGTTCTCACATTCAGTGCGCCAAGCAAGGCTGTCGTaGATGGTCATGCAGGTTAAACAAAACGGCACATGG +
Preference number: 6 (lower is better)
Translates to: WFSHSVRQARLS*MVMQVKQNGTW
Trigger: CCATGTGCCGTTTTGTTTAACCTGCATGACCATTCACGACAGCCTTGCTTGGCGCACTGAATGTGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS GCA 72 bp ATTCAGTGCGCCAAGCAAGGCTGTCGTGAATGGTCATaGAGGTTAAACAAAACGGCACATGGTGGCAAAAGG +
Preference number: 6 (lower is better)
Translates to: IQCAKQGCREWS*RLNKTAHGGKR
Trigger: CCTTTTGCCACCATGTGCCGTTTTGTTTAACCTGCATGACCATTCACGACAGCCTTGCTTGGCGCACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS GCA 72 bp AGCACACCCTACTCAATCTCAAAGCCAAACCTGGTCTaGTTCTTCATGTGGGTCACTGTTAGGCACCTCTCT +
Preference number: 6 (lower is better)
Translates to: STPYSISKPNLV*FFMWVTVRHLS
Trigger: AGAGAGGTGCCTAACAGTGACCCACATGAAGAAGCAGACCAGGTTTGGCTTTGAGATTGAGTAGGGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CCA 72 bp AGCACGGCTGGGGAGTCCTCAGTAAACTTACACTCGTaGCAGAAGCAGAAGCAAACATGTCCTTCTTCACAT +
Preference number: 6 (lower is better)
Translates to: STAGESSVNLHS*QKQKQTCPSSH
Trigger: ATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCACGAGTGTAAGTTTACTGAGGACTCCCCAGCCGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000433324.2
ENST00000437673.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000662009.1
ENST00000665988.1
CDS CCA 72 bp CTTTCATCACCATTGCCTTCAACAGTTCAGCACGGCTaGGGAGTCCTCAGTAAACTTACACTCGTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: LSSPLPSTVQHG*GVLSKLTLVAE
Trigger: TTCTGCCACGAGTGTAAGTTTACTGAGGACTCCCCAGCCGTGCTGAACTGTTGAAGGCAATGGTGATGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000437673.6
ENST00000606119.2
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000662009.1
ENST00000665988.1
CDS CCA 72 bp AGTGTCCTATTATCATCAAATGGGCCCCTGAAGTCATaGGAGGCAGCTAAGAGGACACTTTCCTCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: SVLLSSNGPLKS*EAAKRTLSSPQ
Trigger: TTGGGGAGAGGAAAGTGTCCTCTTAGCTGCCTCCCATGACTTCAGGGGCCCATTTGATGATAATAGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 72 bp CAAGGGATGAAGAAGTCAACTTCTCCTCCCTCCACCTaGGCCCGGGTTATGACAACGTGTTTAATACATGGT +
Preference number: 6 (lower is better)
Translates to: QGMKKSTSPPST*ARVMTTCLIHG
Trigger: ACCATGTATTAAACACGTTGTCATAACCCGGGCCCAGGTGGAGGGAGGAGAAGTTGACTTCTTCATCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CAA 72 bp AGTTGCAGAAATGCAATAAACAAACTGAGGGTACATTaGAACGGGCCAGCGGGCACTTGGCTGCAGCCCATT +
Preference number: 6 (lower is better)
Translates to: SCRNAINKLRVH*NGPAGTWLQPI
Trigger: AATGGGCTGCAGCCAAGTGCCCGCTGGCCCGTTCAAATGTACCCTCAGTTTGTTTATTGCATTTCTGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 90 bp CTTCTTCTTGACCTCTGTCACTGGTTCCCCTGTAAGACAGTACTCTaGATCTTGACATCACCAATCACAGTTCCTCTCCAAGCACCCTCC +
Preference number: 6 (lower is better)
Translates to: LLLDLCHWFPCKTVL*ILTSPITVPLQAPS
Trigger: GGAGGGTGCTTGGAGAGGAACTGTGATTGGTGATGTCAAGATCAAGAGTACTGTCTTACAGGGGAACCAGTGACAGAGGTCAAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 72 bp CATCTTTTCCCTTGGGTTCAGTGCTGTTTCTTGGGATaGCCCTCCTCATTGAGACTTGTTCTTCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: HLFPWVQCCFLG*PSSLRLVLLPG
Trigger: CCCTGGAAGAAGAACAAGTCTCAATGAGGAGGGTCATCCCAAGAAACAGCACTGAACCCAAGGGAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS TCA 72 bp GTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGCTGAGCAAAATGGGG +
Preference number: 6 (lower is better)
Translates to: VAEAEANMSFFT*WQHGEVLSKMG
Trigger: CCCCATTTTGCTCAGCACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS GCA 72 bp TCTGTAGGCTTACACCACTACCCTTATGAGGCTGCCTaGCTGGGGAAACTATTTATCAAGTTCTCAGCACTG +
Preference number: 6 (lower is better)
Translates to: SVGLHHYPYEAA*LGKLFIKFSAL
Trigger: CAGTGCTGAGAACTTGATAAATAGTTTCCCCAGGCAGGCAGCCTCATAAGGGTAGTGGTGTAAGCCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CCA 72 bp ACCCCCATGCTCAGTAATGTAACTCAGGAATTGGAGTaGGGCCTGGAAATCTGCATCTTTACACTGGATGCA +
Preference number: 6 (lower is better)
Translates to: TPMLSNVTQELE*GLEICIFTLDA
Trigger: TGCATCCAGTGTAAAGATGCAGATTTCCAGGCCCCACTCCAATTCCTGAGTTACATTACTGAGCATGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CAA 72 bp TGTCTCTGTGCTCCTGGAGTCTCCTGTCTTCCCTCATaGATGACCTTTATTTCATGGTCAAGGAGCCATCAG +
Preference number: 6 (lower is better)
Translates to: CLCAPGVSCLPS*MTFISWSRSHQ
Trigger: CTGATGGCTCCTTGACCATGAAATAAAGGTCATCAATGAGGGAAGACAGGAGACTCCAGGAGCACAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CAA 72 bp TCTCAGACCCCCATGCTCAGTAATGTAACTCAGGAATaGGAGTGGGGCCTGGAAATCTGCATCTTTACACTG +
Preference number: 6 (lower is better)
Translates to: SQTPMLSNVTQE*EWGLEICIFTL
Trigger: CAGTGTAAAGATGCAGATTTCCAGGCCCCACTCCAATTCCTGAGTTACATTACTGAGCATGGGGGTCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CAA 90 bp CATTCATCCTCAGCTCTCTTGCTTGATCAAATCCATCTGCAGGCTTaGTCCAGAGAGTGTCCTATTATCATCAAATGGGCCCCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: HSSSALLLDQIHLQA*SRECPIIIKWAPEV
Trigger: GACTTCAGGGGCCCATTTGATGATAATAGGACACTCTCTGGACAAAGCCTGCAGATGGATTTGATCAAGCAAGAGAGCTGAGGATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS TCA 72 bp GCATATCCGAGACTGGGTAATTTAAAGAGGTTTAATTaGCTCACAGTTCAGCACGGCTGGGGAGTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: AYPRLGNLKRFN*LTVQHGWGVLS
Trigger: ACTGAGGACTCCCCAGCCGTGCTGAACTGTGAGTCAATTAAACCTCTTTAAATTACCCAGTCTCGGATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433324.2
CDS TCA 72 bp AATGCCTCAAAATTACTGTGTGCTCCCTTCCTGGAATaGCAGCAAGGCCTACTGCCCAAGACTAAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: NASKLLCAPFLE*QQGLLPKTKER
Trigger: TCTTTCCTTAGTCTTGGGCAGTAGGCCTTGCTGTCATTCCAGGAAGGGAGCACACAGTAATTTTGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665988.1
ENST00000670070.1
CDS TCA 72 bp GATGTCTTTGGTGTTGGTGTCAGAGTAATGCTGGTCTaGTGGAACAAGCTGGGAAGTGTTTCCTCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: DVFGVGVRVMLV*WNKLGSVSSSC
Trigger: ACAAGAGGAGGAAACACTTCCCAGCTTGTTCCATCAGACCAGCATTACTCTGACACCAACACCAAAGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS GCA 72 bp TTCCATCTCACTGGTACCCACAATTCCTTTATCCATTaGTTTGTCACTGTCTCTGTGCTCCTGGAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: FHLTGTHNSFIH*FVTVSVLLESP
Trigger: AGGAGACTCCAGGAGCACAGAGACAGTGACAAAGCAATGGATAAAGGAATTGTGGGTACCAGTGAGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 72 bp ATAGAAAGTGACTGGTCAGGGGCTGGGAGGATGGAATaGTCCAAAACTTCCACATATGCTATCCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: IESDWSGAGRME*SKTSTYAILIH
Trigger: ATGGATGAGGATAGCATATGTGGAAGTTTTGGAGCATTCCATCCTCCCAGCCCCTGACCAGTCACTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CCA 72 bp AATTGGAGTGGGGCCTGGAAATCTGCATCTTTACACTaGATGCATAGAGCCCCTGTCTTAGTCTGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: NWSGAWKSASLH*MHRAPVLVCSL
Trigger: CAAAGAACAGACTAAGACAGGGGCTCTATGCATCCAGTGTAAAGATGCAGATTTCCAGGCCCCACTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CAA 90 bp CTGAGGACTCAATGTAGCTTTTTAAGTAATGCTAGTATGCTCTCATaGCAGGAGAACCAGGCCTCCTGTGTACACAGTGCCCTTATATCC +
Preference number: 6 (lower is better)
Translates to: LRTQCSFLSNASMLS*QENQASCVHSALIS
Trigger: GGATATAAGGGCACTGTGTACACAGGAGGCCTGGTTCTCCTGCAATGAGAGCATACTAGCATTACTTAAAAAGCTACATTGAGTCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp ATGTCATCAAATTATGTATCATTGACCATTGAGAGGTaGAGTTACAGAGCCCTTGGCCTGTGTGTTGGGCGC +
Preference number: 6 (lower is better)
Translates to: MSSNYVSLTIER*SYRALGLCVGR
Trigger: GCGCCCAACACACAGGCCAAGGGCTCTGTAACTTCACCTCTCAATGGTCAATGATACATAATTTGATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS GCA 72 bp ACAATTCCTTTATCCATTGCTTTGTCACTGTCTCTGTaGTCCTGGAGTCTCCTGTCTTCCCTCATTGATGAC +
Preference number: 6 (lower is better)
Translates to: TIPLSIALSLSL*SWSLLSSLIDD
Trigger: GTCATCAATGAGGGAAGACAGGAGACTCCAGGAGCACAGAGACAGTGACAAAGCAATGGATAAAGGAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS GCA 72 bp ATGACTATTTGTGTGCTCATTACACAGGGTCTTGCATaGATTTCTGTTAAGACCAGCCCAGGCGCATTGGTT +
Preference number: 6 (lower is better)
Translates to: MTICVLITQGLA*ISVKTSPGALV
Trigger: AACCAATGCGCCTGGGCTGGTCTTAACAGAAATGCATGCAAGACCCTGTGTAATGAGCACACAAATAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CCA 72 bp TTGCAGTGGTCTCATCTTCTTCTTGACCTCTGTCACTaGTTCCCCTGTAAGACAGTACTCTTGATCTTGACA +
Preference number: 6 (lower is better)
Translates to: LQWSHLLLDLCH*FPCKTVLLILT
Trigger: TGTCAAGATCAAGAGTACTGTCTTACAGGGGAACCAGTGACAGAGGTCAAGAAGAAGATGAGACCACTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 72 bp AGGGCCTTAATCCCATTAATGAGAGAGAAACACTCATaGCCTAATCACCTCCTACAGACCCTACCTCTTACT +
Preference number: 6 (lower is better)
Translates to: RALIPLMREKHS*PNHLLQTLPLT
Trigger: AGTAAGAGGTAGGGTCTGTAGGAGGTGATTAGGCCATGAGTGTTTCTCTCTCATTAATGGGATTAAGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000656540.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
CDS CAA 72 bp AGGGAACATTATACATTATCACTGTCCAGTAGCCATTaGCATTGGCATAGGGTCTTCTGGGAGACTGGGTCT +
Preference number: 6 (lower is better)
Translates to: REHYTLSLSSSH*HWHRVFWETGS
Trigger: AGACCCAGTCTCCCAGAAGACCCTATGCCAATGCAAATGGCTACTGGACAGTGATAATGTATAATGTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 72 bp CAATGTAGCTTTTTAAGTAATGCTAGTATGCTCTCATaGCAGGAGAACCAGGCCTCCTGTGTACACAGTGCC +
Preference number: 6 (lower is better)
Translates to: QCSFLSNASMLS*QENQASCVHSA
Trigger: GGCACTGTGTACACAGGAGGCCTGGTTCTCCTGCAATGAGAGCATACTAGCATTACTTAAAAAGCTACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 72 bp TCAGCTCTCTTGCTTGATCAAATCCATCTGCAGGCTTaGTCCAGAGAGTGTCCTATTATCATCAAATGGGCC +
Preference number: 6 (lower is better)
Translates to: SALLLDQIHLQA*SRECPIIIKWA
Trigger: GGCCCATTTGATGATAATAGGACACTCTCTGGACAAAGCCTGCAGATGGATTTGATCAAGCAAGAGAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CAA 72 bp GGTCCTCCGGGATTCTTTGTGAGTATCAAGTCATCCTaGCTACAGACTCTGTCAACTCAAAAGAAGTTCCAC +
Preference number: 6 (lower is better)
Translates to: GPPGFFVSIKSS*LQTLSTQKKFH
Trigger: GTGGAACTTCTTTTGAGTTGACAGAGTCTGTAGCAAGGATGACTTGATACTCACAAAGAATCCCGGAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671563.1
CDS CAA 90 bp AACCTGGATAGGGAACATTATACATTATCACTGTCCAGTAGCCATTaGCATTGGCATAGGGTCTTCTGGGAGACTGGGTCTCAATCCAAA +
Preference number: 6 (lower is better)
Translates to: NLDREHYTLSLSSSH*HWHRVFWETGSQSK
Trigger: TTTGGATTGAGACCCAGTCTCCCAGAAGACCCTATGCCAATGCAAATGGCTACTGGACAGTGATAATGTATAATGTTCCCTATCCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp GTGGCAGAAGCAGAAGCAAACATGTCCTTCTTCACATaGTGGCAACATGGAGAAGTGTTCTCCTTTATGAAG +
Preference number: 6 (lower is better)
Translates to: VAEAEANMSFFT*WQHGEVFSFMK
Trigger: CTTCATAAAGGAGAACACTTCTCCATGTTGCCATCATGTGAAGAAGGACATGTTTGCTTCTGCTTCTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000396588.6
ENST00000437673.6
ENST00000656540.1
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000658632.1
ENST00000660803.1
ENST00000662009.1
ENST00000665165.1
ENST00000665988.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS TCA 72 bp AATCCTGTTTTCTGTAGGCTTACACCACTACCCTTATaGGGCTGCCTGCCTGGGGAAACTATTTATCAAGTT +
Preference number: 6 (lower is better)
Translates to: NPVFCRLTPLPL*GCLPGETIYQV
Trigger: AACTTGATAAATAGTTTCCCCAGGCAGGCAGCCTCATAAGGGTAGTGGTGTAAGCCTACAGAAAACAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS GCA 72 bp TGTGTGCTCCCTTCCTGGAATGACAGCAAGGCCTACTaGCCAAGACTAAGGAAAGATATTCAGTTAAAGATA +
Preference number: 6 (lower is better)
Translates to: CVLPSWNDSKAY*PRLRKDIQLKI
Trigger: TATCTTTAACTGAATATCTTTCCTTAGTCTTGGGCAGTAGGCCTTGCTGTCATTCCAGGAAGGGAGCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000665988.1
ENST00000670070.1
CDS CCA 72 bp CAACACTTTATCCAAGCAATCAGATGGTTCCTTCTTTaGTCTTCTTGCTCCAAAGATAGCTGGTTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: QHFIQAIRWFLL*SSCSKDSWFKA
Trigger: GGCCTTGAACCAGCTATCTTTGGAGCAAGAAGACCAAAGAAGGAACCATCTGATTGCTTGGATAAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396588.6
CDS CAA 90 bp GCTTCCCTTGAAAACATTCCTTTAGGCCAGAACCAACAGCATAATTaGGAGGCAGGAAACTTCCCATTTTCTTTCTTCGCATTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: ASLENIPLGQNQQHN*EAGNFPFSFFAFLA
Trigger: AGCAAGGAATGCGAAGAAAGAAAATGGGAAGTTTCCTGCCTCCAAATTATGCTGTTGGTTCTGGCCTAAAGGAATGTTTTCAAGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS CAA 90 bp AGCACAAAGGAATTATCAACACCTGTACATGTCATGAAATTACCATaGCAGTGGTCTCATCTTCTTCTTGACCTCTGTCACTGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: STKELSTPVHVMKLP*QWSHLLLDLCHWFP
Trigger: GGGGAACCAGTGACAGAGGTCAAGAAGAAGATGAGACCACTGCAATGGTAATTTCATGACATGTACAGGTGTTGATAATTCCTTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CAA 90 bp CACGTAATAGGGGACAAAGGAGAACCAGGTCTCAAAGGTAAAGAATaGCTTGTTTGGAATCAGGACATCAGAGCTGATTCTCAGGCTAAT +
Preference number: 6 (lower is better)
Translates to: HVIGDKGEPGLKGKE*LVWNQDIRADSQAN
Trigger: ATTAGCCTGAGAATCAGCTCTGATGTCCTGATTCCAAACAAGCAATTCTTTACCTTTGAGACCTGGTTCTCCTTTGTCCCCTATTACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS TCA 72 bp TCCATTTCTGATCATCTCACACAGCACATTATCCTCTaGGTTTTTGTAGTGTGCTGCTTCACAAAGCCAACC +
Preference number: 6 (lower is better)
Translates to: SISDHLTQHIIL*VFVVCCFTKPT
Trigger: GGTTGGCTTTGTGAAGCAGCACACTACAAAAACTCAGAGGATAATGTGCTGTGTGAGATGATCAGAAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS GCA 72 bp ATCCAAGCAATCAGATGGTTCCTTCTTTGGTCTTCTTaGTCCAAAGATAGCTGGTTCAAGGCCAGTTTTATC +
Preference number: 6 (lower is better)
Translates to: IQAIRWFLLWSS*SKDSWFKASFI
Trigger: GATAAAACTGGCCTTGAACCAGCTATCTTTGGAGCAAGAAGACCAAAGAAGGAACCATCTGATTGCTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396588.6
CDS GCA 72 bp ATTCATCCTCAGCTCTCTTGCTTGATCAAATCCATCTaGAGGCTTTGTCCAGAGAGTGTCCTATTATCATCA +
Preference number: 6 (lower is better)
Translates to: IHPQLSCLIKSI*RLCPESVLLSS
Trigger: TGATGATAATAGGACACTCTCTGGACAAAGCCTGCAGATGGATTTGATCAAGCAAGAGAGCTGAGGATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 72 bp TCAACACCTGTACATGTCATGAAATTACCATTGCAGTaGTCTCATCTTCTTCTTGACCTCTGTCACTGGTTC +
Preference number: 6 (lower is better)
Translates to: STPVHVMKLPLQ*SHLLLDLCHWF
Trigger: GAACCAGTGACAGAGGTCAAGAAGAAGATGAGACCACTGCAATGGTAATTTCATGACATGTACAGGTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CCA 72 bp CATTTACCTTGTTGTCAAACCAGGGCAGAAAATAGCTaGTCACTATGTGTCCCTTTGACCACGGGTAAATAT +
Preference number: 6 (lower is better)
Translates to: HLPCCQTRAENS*SLCVPLTTGKY
Trigger: ATATTTACCCGTGGTCAAAGGGACACATAGTGACCAGCTATTTTCTGCCCTGGTTTGACAACAAGGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660803.1
CDS CAA 90 bp CAAAAACAAAGTCAAATGGTCAACCAGCATCAGTGGTTTGAAGAATaGCTGAATCAAAATCATGGCCCTACTCTATGCGAACGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: QKQSQMVNQHQWFEE*LNQNHGPTLCERLC
Trigger: ACAGAGCCGTTCGCATAGAGTAGGGCCATGATTTTGATTCAGCAATTCTTCAAACCACTGATGCTGGTTGACCATTTGACTTTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000396588.6
ENST00000433324.2
ENST00000437673.6
ENST00000656771.1
ENST00000657158.1
ENST00000657873.1
ENST00000658093.1
ENST00000660803.1
ENST00000666788.1
ENST00000670070.1
ENST00000671563.1
CDS CAA 90 bp TTTGCAAGCACAAAAGGGTCAATACACTGGAAGAAAATAAAGGCATaGGATTGGTGGATGTCACAACGTGGTTTAGATGAACTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: FASTKGSIHWKKIKA*DWWMSQRGLDELGG
Trigger: CCCTCCAAGTTCATCTAAACCACGTTGTGACATCCACCAATCCAATGCCTTTATTTTCTTCCAGTGTATTGACCCTTTTGTGCTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 90 bp CAAAAACAAAGTCAAATGGTCAACCAGCATCAGTGGTTTGAAGAATaGCTGAATCAAAATCATGGCCCTCTATGCGAACGGCTCTGTATG +
Preference number: 6 (lower is better)
Translates to: QKQSQMVNQHQWFEE*LNQNHGPLCERLCM
Trigger: CATACAGAGCCGTTCGCATAGAGGGCCATGATTTTGATTCAGCAATTCTTCAAACCACTGATGCTGGTTGACCATTTGACTTTGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439598.6
ENST00000662009.1
ENST00000668704.1
CDS CCA 72 bp TCAATACACTGGAAGAAAATAAAGGCATTGGATTGGTaGATGTCACAACGTGGTTTAGATGAACTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: SIHWKKIKALDW*MSQRGLDELGG
Trigger: CCCTCCAAGTTCATCTAAACCACGTTGTGACATCCACCAATCCAATGCCTTTATTTTCTTCCAGTGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CAA 72 bp AAAATTGCAACATCCTCCGTGCTGGGGACAAGAGAGTaGCAGAAATGCAATAAACAAACTGAGGGTACATTT +
Preference number: 6 (lower is better)
Translates to: KIATSSVLGTRE*QKCNKQTEGTF
Trigger: AAATGTACCCTCAGTTTGTTTATTGCATTTCTGCAACTCTCTTGTCCCCAGCACGGAGGATGTTGCAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp GGCATTGGATTGGTGGATGTCACAACGTGGTTTAGATaGACTTGGAGGGAGAGTTTCAAAAACATATATTCT +
Preference number: 6 (lower is better)
Translates to: GIGLVDVTTWFR*TWRESFKNIYS
Trigger: AGAATATATGTTTTTGAAACTCTCCCTCCAAGTTCATCTAAACCACGTTGTGACATCCACCAATCCAATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS TCA 72 bp CAAAGCCAACCTGGTCTTATGCTAGTAAGTAAAAGATaGCTATTTGTGTGCTCATTACACAGGGTCTTGCAT +
Preference number: 6 (lower is better)
Translates to: QSQPGLMLVSKR*LFVCSLHRVLH
Trigger: ATGCAAGACCCTGTGTAATGAGCACACAAATAGTCATCTTTTACTTACTAGCATAAGACCAGGTTGGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS GCA 72 bp ATAATGTGGAAGCTGAGAAGAGCTTTCTTAGAGACCTaGTTTAAGGATGACAACTCAATTGATGTGGACAAG +
Preference number: 6 (lower is better)
Translates to: IMWKLRRAFLET*FKDDNSIDVDK
Trigger: CTTGTCCACATCAATTGAGTTGTCATCCTTAAAGCAGGTCTCTAAGAAAGCTCTTCTCAGCTTCCACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433324.2
CDS CCA 72 bp TTTTGGGGAGTTAATCCAAAGGTCTACCTGACAACCTaGATAGGGAACATTATACATTATCACTGTCCAGTA +
Preference number: 6 (lower is better)
Translates to: FWGVNPKVYLTT*IGNIIHYHCPV
Trigger: TACTGGACAGTGATAATGTATAATGTTCCCTATCCAGGTTGTCAGGTAGACCTTTGGATTAACTCCCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 72 bp ATTCTCAGGCTAATAAATTATCCAGGCAAATCCGTTTaGTTGACAAATAAGGACAGTGAGGGCCAGTGTTTA +
Preference number: 6 (lower is better)
Translates to: ILRLINYPGKSV*LTNKDSEGQCL
Trigger: TAAACACTGGCCCTCACTGTCCTTATTTGTCAACCAAACGGATTTGCCTGGATAATTTATTAGCCTGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CCA 72 bp AACTTAATCGACACATTATCCTTTCATTCATGTTATTaGGCTACTATCACATGCCAGCATTCTTCTAGGCCC +
Preference number: 6 (lower is better)
Translates to: NLIDTLSFHSCY*ATITCQHSSRP
Trigger: GGGCCTAGAAGAATGCTGGCATGTGATAGTAGCCCAATAACATGAATGAAAGGATAATGTGTCGATTAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CAA 72 bp GAATTATCAACACCTGTACATGTCATGAAATTACCATaGCAGTGGTCTCATCTTCTTCTTGACCTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: ELSTPVHVMKLP*QWSHLLLDLCH
Trigger: GTGACAGAGGTCAAGAAGAAGATGAGACCACTGCAATGGTAATTTCATGACATGTACAGGTGTTGATAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439598.6
CDS CAA 72 bp ACATGGATAAGTTCTTTAGTGGTGATTTCTGAGATTTaGATGCACCCATCACCCAAACAGTGTACACTGTAC +
Preference number: 6 (lower is better)
Translates to: TWISSLVVISEI*MHPSPKQCTLY
Trigger: GTACAGTGTACACTGTTTGGGTGATGGGTGCATCAAAATCTCAGAAATCACCACTAAAGAACTTATCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670070.1
CDS CAA 72 bp GGTCCTCCGGGATTCTTTGTGAGTATCAAGTCATCCTaGCTACAGACTCTGTCAACTAATAGATTCATTATT +
Preference number: 6 (lower is better)
Translates to: GPPGFFVSIKSS*LQTLSTNRFII
Trigger: AATAATGAATCTATTAGTTGACAGAGTCTGTAGCAAGGATGACTTGATACTCACAAAGAATCCCGGAGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS TCA 72 bp CCTTTGTGTACTTATAGCTTAGTTCCCACTGCTAAGTaGGAATATGCGACGTTTAGTTTTCTATTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PLCTYSLVPTAK*EYATFSFLFLS
Trigger: ACTCAGGAATAGAAAACTAAACGTCGCATATTCTCACTTAGCAGTGGGAACTAAGCTATAAGTACACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670070.1
CDS GCA 72 bp TACTCGAAGAACAGAGAAATGCATTTGCTTTTACCCTaGCGGTTGGGATTTATTCAGCTGTTTCTAAACAAA +
Preference number: 6 (lower is better)
Translates to: YSKNREMHLLLP*RLGFIQLFLNK
Trigger: TTTGTTTAGAAACAGCTGAATAAATCCCAACCGGCAGGGTAAAAGCAAATGCATTTCTCTGTTCTTCGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000433324.2
ENST00000606119.2
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000665988.1
ENST00000668704.1
ENST00000670070.1
CDS CAA 72 bp AAGAACAGAGAAATGCATTTGCTTTTACCCTGCCGGTaGGGATTTATTCAGCTGTTTCTAAACAAAACCCTT +
Preference number: 6 (lower is better)
Translates to: KNREMHLLLPCR*GFIQLFLNKTL
Trigger: AAGGGTTTTGTTTAGAAACAGCTGAATAAATCCCAACCGGCAGGGTAAAAGCAAATGCATTTCTCTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000433324.2
ENST00000606119.2
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000665988.1
ENST00000668704.1
ENST00000670070.1
CDS CCA 72 bp GATATATTTCTATTGATATATTGCTACAAGGTCACCTaGCTCCTAACAGATAGTGTCCAATACTCGAAGAAC +
Preference number: 6 (lower is better)
Translates to: DIFLLIYCYKVT*LLTDSVQYSKN
Trigger: GTTCTTCGAGTATTGGACACTATCTGTTAGGAGCCAGGTGACCTTGTAGCAATATATCAATAGAAATATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000433324.2
ENST00000606119.2
ENST00000656707.1
ENST00000656771.1
ENST00000657158.1
ENST00000665988.1
ENST00000668704.1
ENST00000670070.1
CDS CAA 90 bp ATAATTTGGAGGCAGGAAACTTCCCATTTTCTTTCTTCGCATTCCTaGCTTTCTAATTGTCTTTTAAGGAAAGTTCTCCCACAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: IIWRQETSHFLSSHS*LSNCLLRKVLPQKE
Trigger: TTCTTTCTGTGGGAGAACTTTCCTTAAAAGACAATTAGAAAGCAAGGAATGCGAAGAAAGAAAATGGGAAGTTTCCTGCCTCCAAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396588.6
ENST00000657873.1
ENST00000662009.1
ENST00000666788.1
ENST00000669075.1
ENST00000671563.1
CDS CCA 72 bp CATGGGGATTATAGAACTACAATTCAAGATGAGATTTaGGACACAGCCAAACCATATCAACTTGGAATAATT +
Preference number: 6 (lower is better)
Translates to: HGDYRTTIQDEI*DTAKPYQLGII
Trigger: AATTATTCCAAGTTGATATGGTTTGGCTGTGTCCCAAATCTCATCTTGAATTGTAGTTCTATAATCCCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433324.2
ENST00000668704.1
CDS CCA 72 bp TTTAAACATTTGGTAGAATTCACCAGTGAAGTTATCTaGGTCTGGGCATTTCTTTTTGGGAAGTCTCTAAAT +
Preference number: 6 (lower is better)
Translates to: FKHLVEFTSEVI*VWAFLFGKSLN
Trigger: ATTTAGAGACTTCCCAAAAAGAAATGCCCAGACCCAGATAACTTCACTGGTGAATTCTACCAAATGTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666788.1
CDS CAA 72 bp CTGCTCTCACCTCTTTTCTCCTTGCATTTCAGTACCTaGATCCCTGATACAAAGAATCTTAATTCAATTTAT +
Preference number: 6 (lower is better)
Translates to: LLSPLFSLHFST*IPDTKNLNSIY
Trigger: ATAAATTGAATTAAGATTCTTTGTATCAGGGATCAAGGTACTGAAATGCAAGGAGAAAAGAGGTGAGAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669075.1
CDS CAA 72 bp ATGTATCCAAAAATATCCAGAATAAGAGTTGATCCTTaGCCTCAAGATGCTAAAGGGATTGTCTGTGTATTA +
Preference number: 6 (lower is better)
Translates to: MYPKISRIRVDP*PQDAKGIVCVL
Trigger: TAATACACAGACAATCCCTTTAGCATCTTGAGGCAAAGGATCAACTCTTATTCTGGATATTTTTGGATACAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433324.2