RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000166482

Ensembl transcript IDs: ENST00000299610.5, ENST00000395592.6, ENST00000497081.6, ENST00000571210.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGCCAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTAACTTCAGGTGTAGGGGAGCCGGGT +
Preference number: 1 (lower is better)
Translates to: PSQVQARTMCLSEEA*GTAGSVTSGVGEPG
Trigger: ACCCGGCTCCCCTACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 90 bp AGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTaGACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACAGGGGTCC +
Preference number: 1 (lower is better)
Translates to: SAGLWPRIHHGPCSH*TAQLSTLGWPRQGS
Trigger: GGACCCCTGTCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp CCTGGCTGTCAGCTGTTGGGACAGGTTGGAGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAG +
Preference number: 1 (lower is better)
Translates to: PGCQLLGQVGGNSFS*SPARSRLEPCASRK
Trigger: CTTCCGAGAGGCACATGGTTCTAGCCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTaGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGAC +
Preference number: 1 (lower is better)
Translates to: HGPCSHCTAQLSTLG*PRQGSTVRKQDKMD
Trigger: GTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp AGGAAGCAGGACAAGATGGACCACAAAGGCCTGCAGCTGGGAGAGTaGCTCCTGGCTGTCAGCTGTTGGGACAGGTTGGAGGCAACTCAT +
Preference number: 1 (lower is better)
Translates to: RKQDKMDHKGLQLGE*LLAVSCWDRLEATH
Trigger: ATGAGTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 90 bp CCTCATATGCATGCCTACCTTGGCTGTGGCTGTTTCAGGGTGGTGTaGGGTAGCTGTGTTCTTGGCATAGAGCTTCAGGGGCTGGGATGG +
Preference number: 1 (lower is better)
Translates to: PHMHAYLGCGCFRVV*GSCVLGIELQGLGW
Trigger: CCATCCCAGCCCCTGAAGCTCTATGCCAAGAACACAGCTACCGCACACCACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp AGGACAAGATGGACCACAAAGGCCTGCAGCTGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACAGGTTGGAGGCAACTCATTCTCATG +
Preference number: 1 (lower is better)
Translates to: RTRWTTKACSWESGS*LSAVGTGWRQLILM
Trigger: CATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGTGGTCCATCTTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp AAGATGGGACATGGTTTGAGAGCAGCCCAGAGGAGTGCTGGGCTGTaGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAG +
Preference number: 1 (lower is better)
Translates to: KMGHGLRAAQRSAGL*PRIHHGPCSHCTAQ
Trigger: CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTGCTCTCAAACCATGTCCCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp CTACCCACTCCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTaGCTAAACCTCTCAACACCCAGAGGGTATGGGGAAGACCTCATA +
Preference number: 1 (lower is better)
Translates to: LPTPSPAEIVLCSLM*LNLSTPRGYGEDLI
Trigger: TATGAGGTCTTCCCCATACCCTCTGGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGGAGTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 90 bp TGGCTAAACCTCTCAACACCCAGAGGGTATGGGGAAGACCTCATATaGATGCCTACCTTGGCTGTGGCTGTTTCAGGGTGGTGTGCGGTA +
Preference number: 1 (lower is better)
Translates to: WLNLSTPRGYGEDLI*MPTLAVAVSGWCAV
Trigger: TACCGCACACCACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTTGAGAGGTTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 90 bp CCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAGAGGGTATaGGGAAGACCTCATATGCATGCCTACCTTGGCTGTGGCTGTTTC +
Preference number: 1 (lower is better)
Translates to: PLLPHVAKPLNTQRV*GRPHMHAYLGCGCF
Trigger: GAAACAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR TCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGGGATGTGGCATGGCTaGGAGCCACAAGGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHGMWHG*EPQGPL
Trigger: AAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR TCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCT +
Preference number: 2 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGDALGV*QGCGMA
Trigger: AGCCATGCCACATCCCTGTCACACACCCAGGGCATC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCC +
Preference number: 2 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGDRDVA*LRATRP
Trigger: GGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCC +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLDRDVA*LRATRP
Trigger: GGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGCAGGCTAGAACCATGTaGCTCTCGGAAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLQARTM*LSEEAW
Trigger: CCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTG...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGACAAAGGCCTGCAGCTaGGAGAGTGGCTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQTKACS*ESGSWL
Trigger: CAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACCTTAGCACACTAGGGTaGCCCAGACAGGGGTCCACA +
Preference number: 2 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHLSTLG*PRQGST
Trigger: TGTGGACCCCTGTCTGGGCCACCCTAGTGTGCTAAG...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGATAGTGAGGTGGGCTaGGGTTCCACGGTACTCACC +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLDSEVG*GSTVLT
Trigger: GGTGAGTACCGTGGAACCCCAGCCCACCTCACTATC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CAA 90 bp AGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAGAAGCATGCATCAGGGGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: RDVAWLRATRPPCKE*VLGNQQKHASGAAE
Trigger: CTCTGCTGCCCCTGATGCATGCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCAGGCTAGAACCATGTaGCTCTCGGAAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQQARTM*LSEEAW
Trigger: CCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGCACTCATGGAGACCATaGGTGTCCAGGGGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLHSWRP*VSRGGK
Trigger: CTTTCCTCCCCTGGACACCCATGGTCTCCATGAGTG...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGGCCTGGGGAACTGCTaGCAGTGTAACTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLGLGNC*QCNFRC
Trigger: ACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGCTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRLSEEA*GTAGSV
Trigger: TACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAG...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGGAAGCAGGACAAGATaGACCACAAAGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHGSRTR*TTKACS
Trigger: GCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGTGGCTGTTTCAGGGTaGTGTGCGGTAGCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLVAVSG*CAVAVF
Trigger: GAACACAGCTACCGCACACCACCCTGAAACAGCCAC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR TCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCT +
Preference number: 2 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTDALGV*QGCGMA
Trigger: AGCCATGCCACATCCCTGTCACACACCCAGGGCATC...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCCTTGTAAGGAGTTGGTaGTCGGGAATCAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGLVRSW*SGISRS
Trigger: GCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAG...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQRGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRRGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGTGTTTCAGGGTGGTGTaGGGTAGCTGTGTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLCFRVV*GSCVLG
Trigger: GCCAAGAACACAGCTACCGCACACCACCCTGAAACA...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACACTCATGGAGACCATaGGTGTCCAGGGGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRHSWRP*VSRGGK
Trigger: CTTTCCTCCCCTGGACACCCATGGTCTCCATGAGTG...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGCACTCATGGAGACCATaGGTGTCCAGGGGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRHSWRP*VSRGGK
Trigger: CTTTCCTCCCCTGGACACCCATGGTCTCCATGAGTG...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGGAAGCAGGACAAGATaGACCACAAAGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRGSRTR*TTKACS
Trigger: GCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGCAGAGATTGTCCTCTaGTCCCTCATGTGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLAEIVL*SLMWLN
Trigger: GTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTLSEEA*GTAGSV
Trigger: TACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAG...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCTGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACA +
Preference number: 2 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPWESGS*LSAVGT
Trigger: TGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCA...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGCTTGTAAGGAGTTGGTaGTCGGGAATCAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRLVRSW*SGISRS
Trigger: GCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAG...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCTGGCTTAGGAATGGATaGCCTGGGTGTGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTWLRNG*PGCVTG
Trigger: CCCTGTCACACACCCAGGGCATCCATTCCTAAGCCA...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCGTGGCTGTTTCAGGGTaGTGTGCGGTAGCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTVAVSG*CAVAVF
Trigger: GAACACAGCTACCGCACACCACCCTGAAACAGCCAC...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACATGCCTACCTTGGCTGTaGCTGTTTCAGGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTCLPWL*LFQGGV
Trigger: CACACCACCCTGAAACAGCCACAGCCAAGGTAGGCA...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCGGGGAAGACCTCATATaGATGCCTACCTTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPGEDLI*MPTLAV
Trigger: CACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCC...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAGTATGATAGTGAGGTaGGCTGGGGTTCCACGGTAC +
Preference number: 2 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPSMIVR*AGVPRY
Trigger: GTACCGTGGAACCCCAGCCCACCTCACTATCATACT...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAAAGACCTCATATGCATaGCTACCTTGGCTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTKTSYA*LPWLWL
Trigger: CAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTT...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGACAGGCTAGAACCATGTaGCTCTCGGAAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRQARTM*LSEEAW
Trigger: CCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTG...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGATGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACA +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRWESGS*LSAVGT
Trigger: TGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCA...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGATGGCTTAGGAATGGATaGCCTGGGTGTGTGACAGGG +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRWLRNG*PGCVTG
Trigger: CCCTGTCACACACCCAGGGCATCCATTCCTAAGCCA...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRRGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAGGCCTGGGGAACTGCTaGCAGTGTAACTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRGLGNC*QCNFRC
Trigger: ACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCC...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAAGTATGATAGTGAGGTaGGCTGGGGTTCCACGGTAC +
Preference number: 2 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRSMIVR*AGVPRY
Trigger: GTACCGTGGAACCCCAGCCCACCTCACTATCATACT...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR TCA 72 bp GCCGGGTCTGGCTTAGGAATGGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCTGAGAGCCACAAGGCC +
Preference number: 3 (lower is better)
Translates to: AGSGLGMDALGV*QGCGMAESHKA
Trigger: GGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTCCTAAGCCAGACCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 72 bp TGGACCACAAAGGCCTGCAGCTGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACAGGTTGGAGGCAACTC +
Preference number: 3 (lower is better)
Translates to: WTTKACSWESGS*LSAVGTGWRQL
Trigger: GAGTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CAA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGCCTGGCTGTCAGCTGTaGGGACAGGTTGGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRPGCQL*GQVGGN
Trigger: GTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGG...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 72 bp GACAAGATGGACCACAAAGGCCTGCAGCTGGGAGAGTaGCTCCTGGCTGTCAGCTGTTGGGACAGGTTGGAG +
Preference number: 3 (lower is better)
Translates to: DKMDHKGLQLGE*LLAVSCWDRLE
Trigger: CTCCAACCTGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGTGGTCCATCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CAA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAG +
Preference number: 3 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRPPCKE*VLGNQQ
Trigger: CTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGG...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 72 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: EWMPWVCDRDVA*LRATRPPCKEL
Trigger: CAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CCA 72 bp CATGGTTTGAGAGCAGCCCAGAGGAGTGCTGGGCTGTaGCCTAGAATACACCATGGGCCCTGTTCACACTGC +
Preference number: 3 (lower is better)
Translates to: HGLRAAQRSAGL*PRIHHGPCSHC
Trigger: GCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTGCTCTCAAACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CAA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAG +
Preference number: 3 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTPPCKE*VLGNQQ
Trigger: CTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGG...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 72 bp CTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTaGACTGCTCAGCTTAGCACACTAGGGTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: LWPRIHHGPCSH*TAQLSTLGWPR
Trigger: TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 72 bp CATGCCTACCTTGGCTGTGGCTGTTTCAGGGTGGTGTaGGGTAGCTGTGTTCTTGGCATAGAGCTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: HAYLGCGCFRVV*GSCVLGIELQG
Trigger: CCCCTGAAGCTCTATGCCAAGAACACAGCTACCGCACACCACCCTGAAACAGCCACAGCCAAGGTAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CAA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAAGCTGTTGGGACAGGTaGGAGGCAACTCATTCTCAT +
Preference number: 3 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRSCWDR*EATHSH
Trigger: ATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 72 bp CAACACCCAGAGGGTATGGGGAAGACCTCATATGCATaGCTACCTTGGCTGTGGCTGTTTCAGGGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: QHPEGMGKTSYA*LPWLWLFQGGV
Trigger: CACACCACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR GCA 72 bp CTCTCAACACCCAGAGGGTATGGGGAAGACCTCATATaGATGCCTACCTTGGCTGTGGCTGTTTCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LSTPRGYGEDLI*MPTLAVAVSGW
Trigger: CCACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR-3UTR CAA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAAGCTGTTGGGACAGGTaGGAGGCAACTCATTCTCAT +
Preference number: 3 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLSCWDR*EATHSH
Trigger: ATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCT...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR TCA 72 bp TATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTaGAGGTTTATTGAGACCTTCAGTCCCTACCCACTC +
Preference number: 3 (lower is better)
Translates to: YVCVYEASSFRF*RFIETFSPYPL
Trigger: GAGTGGGTAGGGACTGAAGGTCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCCGGATCCCGGAGACCTaGGGGGCACACGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGRIPET*GAHGGV
Trigger: CACGCCCCCGTGTGCCCCCCAGGTCTCCGGGATCCG...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGCGGATCCCGGAGACCTaGGGGGCACACGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKERIPET*GAHGGV
Trigger: CACGCCCCCGTGTGCCCCCCAGGTCTCCGGGATCCG...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGACATCCTCCTCTGCGCTaGCCGCGTTCGGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGHPPLR*PRSGRW
Trigger: CCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATG...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACCGGCAGGGCCAGGAGTaGCTGGCGATGGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHRQGQE*LAMGRQ
Trigger: CTGTCTGCCCATCGCCAGGCACTCCTGGCCCTGCCG...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGGCCCGAGGGGTAGATaGGGTACACGCCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGGPRGR*GTRRLT
Trigger: AGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGGGATGTGGCATGGCTaGGAGCCACAAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGGMWHG*EPQGPL
Trigger: AAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGGACAGGGAGTCACCTaGCCCGCCATCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGGQGVT*PAILKA
Trigger: GGCTTTGAGGATGGCGGGGCAGGTGACTCCCTGTCC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACGGATCCCGGAGACCTaGGGGGCACACGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTRIPET*GAHGGV
Trigger: CACGCCCCCGTGTGCCCCCCAGGTCTCCGGGATCCG...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGTGGCCAGGGGCCTCTaGAGTGGGCTCAGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRVARGL*SGLSSP
Trigger: GGGGGAACTGAGCCCACTCCAGAGGCCCCTGGCCAC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR TCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGAGGTACACGCCGTCTaGCTGGTAGCCCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGEVHAV*LVALGI
Trigger: TATGCCCAGGGCTACCAGTCAGACGGCGTGTACCTC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCATCCTCCTCTGCGCTaGCCGCGTTCGGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRHPPLR*PRSGRW
Trigger: CCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATG...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCATCCTCCTCTGCGCTaGCCGCGTTCGGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNHPPLR*PRSGRW
Trigger: CCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGDRDVA*LRATRP
Trigger: GGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGAGGTACACGCCGTCTaGCTGGTAGCCCTGGGCATA +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLEVHAV*LVALGI
Trigger: TATGCCCAGGGCTACCAGTCAGACGGCGTGTACCTC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGAACCAGAAGGCTCCTaGGGAGAGAGCTGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGEPEGS*GESCAV
Trigger: AACTGCGCAGCTCTCTCCTCAGGAGCCTTCTGGTTC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATGGGATGTGGCATGGCTaGGAGCCACAAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNGMWHG*EPQGPL
Trigger: AAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCC...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLDALGV*QGCGMA
Trigger: AGCCATGCCACATCCCTGTCACACACCCAGGGCATC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGGTAGCCATCCTCCTCTaGGCTGACCGCGTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQVAILL*ADRVRG
Trigger: TCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTAC...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGGTAGCCATCCTCCTCTaGGCTGACCGCGTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEVAILL*ADRVRG
Trigger: TCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTAC...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGATGGCAAAGTGGCAGCTaGGGAACCAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGWQSGS*GTRRLL
Trigger: CAGGAGCCTTCTGGTTCCGCAGCTGCCACTTTGCCA...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCTGGCAAAGTGGCAGCTaGGGAACCAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGWQSGS*GTRRLL
Trigger: CAGGAGCCTTCTGGTTCCGCAGCTGCCACTTTGCCA...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCCCGCGTTCGGGGAGATaGAGAAGTCAGCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGPRSGR*RSQRTW
Trigger: CCAAGTACGCTGACTTCTCCATCTCCCCGAACGCGG...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHDRDVA*LRATRP
Trigger: GGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACAAAGGCCTGCAGCTaGGAGAGTGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHTKACS*ESGSWL
Trigger: CAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCCTTAGCACACTAGGGTaGCCCAGACAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGLSTLG*PRQGST
Trigger: TGTGGACCCCTGTCTGGGCCACCCTAGTGTGCTAAG...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACAGGGGCCTCTGGAGTaGGCTCAGTTCCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRQGPLE*AQFPHA
Trigger: AGCATGGGGGAACTGAGCCCACTCCAGAGGCCCCTG...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR TCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGAACCAGAAGGCTCCTaGGGAGAGAGCTGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHEPEGS*GESCAV
Trigger: AACTGCGCAGCTCTCTCCTCAGGAGCCTTCTGGTTC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEDALGV*QGCGMA
Trigger: AGCCATGCCACATCCCTGTCACACACCCAGGGCATC...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGATGCCCTGGGTGTGTaGCAGGGATGTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRDALGV*QGCGMA
Trigger: AGCCATGCCACATCCCTGTCACACACCCAGGGCATC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGATGGCTTAGGAATGGATaGCCTGGGTGTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGWLRNG*PGCVTG
Trigger: CCCTGTCACACACCCAGGGCATCCATTCCTAAGCCA...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGGGCCCTGTTCACACTaGACTGCTCAGCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGGPCSH*TAQLST
Trigger: TGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGGGCTCAGTTCCCCCATaGTATGAGTCCCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQGSVPP*YESPDP
Trigger: AGGGTCGGGGGACTCATAGCATGGGGGAACTGAGCC...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTTCCCGCCCTCGGTaGTCATGTCACAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHTSRPR*SCHRRR
Trigger: CCGTCTTCTGTGACATGACCACCGAGGGCGGGAAGT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCTGCACAAAGAGGTCCTaGTCCCGGTCGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGCTKRS*SRSKVE
Trigger: CTCTACCTTCGACCGGGACCAGGACCTCTTTGTGCA...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGGCCTGGGGAACTGCTaGCAGTGTAACTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGGLGNC*QCNFRC
Trigger: ACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGACAAAGGCCTGCAGCTaGGAGAGTGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRTKACS*ESGSWL
Trigger: CAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGT...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGGAAGCAGGACAAGATaGACCACAAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGGSRTR*TTKACS
Trigger: GCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGTGGCTGTTTCAGGGTaGTGTGCGGTAGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGVAVSG*CAVAVF
Trigger: GAACACAGCTACCGCACACCACCCTGAAACAGCCAC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGTGGCTGTTTCAGGGTaGTGTGCGGTAGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGVAVSG*CAVAVF
Trigger: GAACACAGCTACCGCACACCACCCTGAAACAGCCAC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCTGCCTACCTTGGCTGTaGCTGTTTCAGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGCLPWL*LFQGGV
Trigger: CACACCACCCTGAAACAGCCACAGCCAAGGTAGGCA...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGGCCCGAGGGGTAGATaGGGTACACGCCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTGPRGR*GTRRLT
Trigger: AGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGGAACCAGAAGGCTCCTaGGGAGAGAGCTGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEEPEGS*GESCAV
Trigger: AACTGCGCAGCTCTCTCCTCAGGAGCCTTCTGGTTC...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCCTAGGTAGAAGCCATTaGGGTTGGCAAAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGLGRSH*GWQSGS
Trigger: GCTGCCACTTTGCCAACCTCAATGGCTTCTACCTAG...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGATCATGCTGTCAGTTCTaGTCAGAGTGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGSCCQF*SEWLGV
Trigger: GACACCCAGCCACTCTGAGCAGAACTGACAGCATGA...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299610.5
ENST00000395592.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCGGCAGGGCCAGGAGTaGCTTCATGCTGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQRQGQE*LHAVSS
Trigger: AGAACTGACAGCATGAAGGCACTCCTGGCCCTGCCG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299610.5
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCGTAGCCATCCTCCTCTaGGCTGACCGCGTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPVAILL*ADRVRG
Trigger: TCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTAC...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGGACAGGGAGTCACCTaGCCCGCCATCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTGQGVT*PAILKA
Trigger: GGCTTTGAGGATGGCGGGGCAGGTGACTCCCTGTCC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLRGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCAGGCTAGAACCATGTaGCTCTCGGAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRQARTM*LSEEAW
Trigger: CCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTG...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCTGTTTCAGGGTGGTGTaGGGTAGCTGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGCFRVV*GSCVLG
Trigger: GCCAAGAACACAGCTACCGCACACCACCCTGAAACA...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGACCCACTCCCAGCCCTaGAGAGATTGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQTHSQP*RDCPLL
Trigger: GAGCAGAGGACAATCTCTGCAGGGCTGGGAGTGGGT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAACCCACTCCCAGCCCTaGAGAGATTGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRTHSQP*RDCPLL
Trigger: GAGCAGAGGACAATCTCTGCAGGGCTGGGAGTGGGT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGACTTCCCGCCCTCGGTaGTCATGTCACAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRTSRPR*SCHRRR
Trigger: CCGTCTTCTGTGACATGACCACCGAGGGCGGGAAGT...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCCGCGTTCGGGGAGATaGAGAAGTCAGCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNPRSGR*RSQRTW
Trigger: CCAAGTACGCTGACTTCTCCATCTCCCCGAACGCGG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACTGCACAAAGAGGTCCTaGTCCCGGTCGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHCTKRS*SRSKVE
Trigger: CTCTACCTTCGACCGGGACCAGGACCTCTTTGTGCA...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNLSEEA*GTAGSV
Trigger: TACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQLSEEA*GTAGSV
Trigger: TACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGGGCAACTCATTCTCATaGAGCCCAGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRGNSFS*SPARSR
Trigger: CCTGGACCTGGCTGGGCTCCATGAGAATGAGTTGCC...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGTGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQWESGS*LSAVGT
Trigger: TGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCA...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGTGGGAGAGTGGCTCCTaGCTGTCAGCTGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRWESGS*LSAVGT
Trigger: TGTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCA...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCTTAGCACACTAGGGTaGCCCAGACAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNLSTLG*PRQGST
Trigger: TGTGGACCCCTGTCTGGGCCACCCTAGTGTGCTAAG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACAGGAGTGCTGGGCTGTaGCCTAGAATACACCATGGG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHRSAGL*PRIHHG
Trigger: CCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGAGGAGTGCTGGGCTGTaGCCTAGAATACACCATGGG +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLRSAGL*PRIHHG
Trigger: CCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCT...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGATAGTGAGGTGGGCTaGGGTTCCACGGTACTCACC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRDSEVG*GSTVLT
Trigger: GGTGAGTACCGTGGAACCCCAGCCCACCTCACTATC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGATAGTGAGGTGGGCTaGGGTTCCACGGTACTCACC +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRDSEVG*GSTVLT
Trigger: GGTGAGTACCGTGGAACCCCAGCCCACCTCACTATC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCAGTATGATAGTGAGGTaGGCTGGGGTTCCACGGTAC +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGSMIVR*AGVPRY
Trigger: GTACCGTGGAACCCCAGCCCACCTCACTATCATACT...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGTGCCTACCTTGGCTGTaGCTGTTTCAGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLCLPWL*LFQGGV
Trigger: CACACCACCCTGAAACAGCCACAGCCAAGGTAGGCA...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGACTCTGCTCCCTCATGTaGCTAAACCTCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGLCSLM*LNLSTP
Trigger: GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAG...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCAGTCCAGGGGTTGCTaGAGGCAAAACCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQQSRGC*RQNLSR
Trigger: TCTGGAGAGGTTTTGCCTTCAGCAACCCCTGGACTG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAAGTTCCCCCATGCTATaGGTCCCCCGACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLSSPML*VPRPWA
Trigger: GGCCCAGGGTCGGGGGACTCATAGCATGGGGGAACT...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR GCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATTTCAGTGTCAGGAGGTaGATGTTCTGCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNFSVRR*MFCSPS
Trigger: GCTGGGGCTGCAGAACATGCACCTCCTGACACTGAA...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGGCCATCCTCAAAGCCTaGCACAAAGAGGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEAILKA*HKEGVA
Trigger: GGCTACACCCTCTTTGTGGCAGGCTTTGAGGATGGC...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGCCATCCTCAAAGCCTaGCACAAAGAGGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRAILKA*HKEGVA
Trigger: GGCTACACCCTCTTTGTGGCAGGCTTTGAGGATGGC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAAGAGCTGCGCAGTTCTaGACAAAGAGGTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRRAAQF*TKRSWS
Trigger: GGACCAGGACCTCTTTGTGCAGAACTGCGCAGCTCT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGTGGCTTAGGAATGGATaGCCTGGGTGTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRWLRNG*PGCVTG
Trigger: CCCTGTCACACACCCAGGGCATCCATTCCTAAGCCA...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKERGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGGCCCCGTACCTTCATaGTGTCAGTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRGPVPS*CQFCSE
Trigger: CTCTGAGCAGAACTGACAGCATGAAGGTACGGGGCC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATTGCACAAAGAGGTCCTaGTCCCGGTCGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNCTKRS*SRSKVE
Trigger: CTCTACCTTCGACCGGGACCAGGACCTCTTTGTGCA...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCACTCATGGAGACCATaGGTGTCCAGGGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQHSWRP*VSRGGK
Trigger: CTTTCCTCCCCTGGACACCCATGGTCTCCATGAGTG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCGACAGGGATGTGGCATaGCTGAGAGCCACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTDRDVA*LRATRP
Trigger: GGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTC...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGGGCCTGGGGAACTGCTaGCAGTGTAACTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRGLGNC*QCNFRC
Trigger: ACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCC...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGGCCTGGGGAACTGCTaGCAGTGTAACTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRGLGNC*QCNFRC
Trigger: ACACCTGAAGTTACACTGCCAGCAGTTCCCCAGGCC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATTGCCTACCTTGGCTGTaGCTGTTTCAGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNCLPWL*LFQGGV
Trigger: CACACCACCCTGAAACAGCCACAGCCAAGGTAGGCA...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CAA 72 bp GCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAGAAGCATGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AWLRATRPPCKE*VLGNQQKHASG
Trigger: CCCTGATGCATGCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGTTCTGAAGGTTTATTaGGACCTTCAGTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGVLKVY*DLQSLP
Trigger: GGGTAGGGACTGAAGGTCTCAATAAACCTTCAGAAC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGTCATGCTGTCAGTTCTaGTCAGAGTGGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQSCCQF*SEWLGV
Trigger: GACACCCAGCCACTCTGAGCAGAACTGACAGCATGA...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299610.5
ENST00000395592.6
CDS-3UTR GCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCGCAGCTCATACTTCTaGTTCAGTGTCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRRSSYF*FSVRRC
Trigger: GCACCTCCTGACACTGAAGCAGAAGTATGAGCTGCG...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACGCAGCTCATACTTCTaGTTCAGTGTCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRRSSYF*FSVRRC
Trigger: GCACCTCCTGACACTGAAGCAGAAGTATGAGCTGCG...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACAAGACCTCATATGCATaGCTACCTTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHKTSYA*LPWLWL
Trigger: CAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGGGGAAGACCTCATATaGATGCCTACCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRGEDLI*MPTLAV
Trigger: CACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGCAGAGATTGTCCTCTaGTCCCTCATGTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHAEIVL*SLMWLN
Trigger: GTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACCAAGGAGGAGCCAGGTaGCTACATTTGGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHQGGAR*LHLGDK
Trigger: TTTATCCCCCAAATGTAGGCACCTGGCTCCTCCTTG...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGACCATTGAATCTCTTCTaGAAAACCGTCCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGPLNLF*KTVHFP
Trigger: CGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGG...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCAGAAGTCAGCGTACTTaGCATAGGCCGTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGRSQRT*HRPCCS
Trigger: AGAACAACACGGCCTATGCCAAGTACGCTGACTTCT...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCGCGTTCGGGGAGATaGAGAAGTCAGCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTPRSGR*RSQRTW
Trigger: CCAAGTACGCTGACTTCTCCATCTCCCCGAACGCGG...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGATAGTGAGGTGGGCTaGGGTTCCACGGTACTCACC +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTDSEVG*GSTVLT
Trigger: GGTGAGTACCGTGGAACCCCAGCCCACCTCACTATC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCTCTGCTCCCTCATGTaGCTAAACCTCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRLCSLM*LNLSTP
Trigger: GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAG...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCTCTGCTCCCTCATGTaGCTAAACCTCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNLCSLM*LNLSTP
Trigger: GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAGTCCAGGGGTTGCTaGAGGCAAAACCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTQSRGC*RQNLSR
Trigger: TCTGGAGAGGTTTTGCCTTCAGCAACCCCTGGACTG...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGTCATCTCAGTGCGTTTaGGGGAGTAGTAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRSSQCV*GSSRSP
Trigger: AGGGCTTCTACTACTCCCTCAAACGCACTGAGATGA...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGGTTCTGAAGGTTTATTaGGACCTTCAGTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLVLKVY*DLQSLP
Trigger: GGGTAGGGACTGAAGGTCTCAATAAACCTTCAGAAC...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAGAGCTGCGCAGTTCTaGACAAAGAGGTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPRAAQF*TKRSWS
Trigger: GGACCAGGACCTCTTTGTGCAGAACTGCGCAGCTCT...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGAATCAGCAGAAGCATaGATCAGGGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTESAEA*IRGSRG
Trigger: CCCTCTGCTGCCCCTGATGCATGCTTCTGCTGATTC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGCTTGTAAGGAGTTGGTaGTCGGGAATCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKELVRSW*SGISRS
Trigger: GCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAG...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTGTAAGGAGTTGGTaGTCGGGAATCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQLVRSW*SGISRS
Trigger: GCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAG...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCAGAGGCCTGGGGAACTaGTGGCAGTGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTRGLGN*WQCNFR
Trigger: CCTGAAGTTACACTGCCAGCAGTTCCCCAGGCCTCT...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGAAGACCTCATATGCATaGCTACCTTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQKTSYA*LPWLWL
Trigger: CAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGCAAGGAGGAGCCAGGTaGCTACATTTGGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRQGGAR*LHLGDK
Trigger: TTTATCCCCCAAATGTAGGCACCTGGCTCCTCCTTG...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAACAAAGGCCTGCAGCTaGGAGAGTGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLTKACS*ESGSWL
Trigger: CAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGT...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCGGAAGCAGGACAAGATaGACCACAAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPGSRTR*TTKACS
Trigger: GCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCC...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGGAAGCAGGACAAGATaGACCACAAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTGSRTR*TTKACS
Trigger: GCTGCAGGCCTTTGTGGTCCATCTTGTCCTGCTTCC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAAGGAGTGCTGGGCTGTaGCCTAGAATACACCATGGG +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTRSAGL*PRIHHG
Trigger: CCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCT...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGTATGCATGCCTACCTTaGCTGTGGCTGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRYACLP*LWLFQG
Trigger: ACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATA...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGTATGCATGCCTACCTTaGCTGTGGCTGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRYACLP*LWLFQG
Trigger: ACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATA...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGAACACCCAGAGGGTATaGGGAAGACCTCATATGCAT +
Preference number: 4 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLNTQRV*GRPHMH
Trigger: ATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTT...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACGCGGAAGAAACTTACTaGGCCATTGAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHAEETY*AIESLL
Trigger: CAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGC...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCCTAGGTAGAAGCCATTaGGGTTGGCAAAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPLGRSH*GWQSGS
Trigger: GCTGCCACTTTGCCAACCTCAATGGCTTCTACCTAG...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCTCCACTGGGCCCAGTTaGTGCCATTGGCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTSTGPS*CHWHKR
Trigger: TCTCTTATGCCAATGGCATCAACTGGGCCCAGTGGA...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCTCCACTGGGCCCAGTTaGTGCCATTGGCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPSTGPS*CHWHKR
Trigger: TCTCTTATGCCAATGGCATCAACTGGGCCCAGTGGA...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGTTCTGAAGGTTTATTaGGACCTTCAGTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRVLKVY*DLQSLP
Trigger: GGGTAGGGACTGAAGGTCTCAATAAACCTTCAGAAC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCCGCAGCTCATACTTCTaGTTCAGTGTCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPRSSYF*FSVRRC
Trigger: GCACCTCCTGACACTGAAGCAGAAGTATGAGCTGCG...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTACAGGCTAGAACCATGTaGCTCTCGGAAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLQARTM*LSEEAW
Trigger: CCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTG...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCTGTTTCAGGGTGGTGTaGGGTAGCTGTGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTCFRVV*GSCVLG
Trigger: GCCAAGAACACAGCTACCGCACACCACCCTGAAACA...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGACCATTGAATCTCTTCTaGAAAACCGTCCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRPLNLF*KTVHFP
Trigger: CGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGG...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGCCATTGAATCTCTTCTaGAAAACCGTCCACTTCCCG +
Preference number: 4 (lower is better)
Translates to: VCDRDVAWLRATRPPCKEPLNLF*KTVHFP
Trigger: CGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGG...CTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp GAATGGATGCCCTGGGTGTGTGACAGGGATGTGGCATGGCTGAGAGCCACAAGGAGAAGTCAGCGTACTTaGCATAGGCCGTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EWMPWVCDRDVAWLRATRRSQRT*HRPCCS
Trigger: AGAACAACACGGCCTATGCCAAGTACGCTGACTTCT...CCTTGTGGCTCTCAGCCATGCCACATCCCTGTCACACACCCAGGGCATCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTACTCTCGGAAGAGGCCTaGGGAACTGCTGGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLLSEEA*GTAGSV
Trigger: TACACTGCCAGCAGTTCCCCAGGCCTCTTCCGAGAG...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAAGTATGATAGTGAGGTaGGCTGGGGTTCCACGGTAC +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTSMIVR*AGVPRY
Trigger: GTACCGTGGAACCCCAGCCCACCTCACTATCATACT...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTACAGTCCAGGGGTTGCTaGAGGCAAAACCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLQSRGC*RQNLSR
Trigger: TCTGGAGAGGTTTTGCCTTCAGCAACCCCTGGACTG...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCTCATCTCAGTGCGTTTaGGGGAGTAGTAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTSSQCV*GSSRSP
Trigger: AGGGCTTCTACTACTCCCTCAAACGCACTGAGATGA...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACATCATCTCAGTGCGTTTaGGGGAGTAGTAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTSSQCV*GSSRSP
Trigger: AGGGCTTCTACTACTCCCTCAAACGCACTGAGATGA...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGCCATCCTCAAAGCCTaGCACAAAGAGGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLAILKA*HKEGVA
Trigger: GGCTACACCCTCTTTGTGGCAGGCTTTGAGGATGGC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAAGAGCTGCGCAGTTCTaGACAAAGAGGTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLRAAQF*TKRSWS
Trigger: GGACCAGGACCTCTTTGTGCAGAACTGCGCAGCTCT...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTATGGCTTAGGAATGGATaGCCTGGGTGTGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLWLRNG*PGCVTG
Trigger: CCCTGTCACACACCCAGGGCATCCATTCCTAAGCCA...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGCCCTGTTCACACTaGACTGCTCAGCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLGPCSH*TAQLST
Trigger: TGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCGCAGAGATTGTCCTCTaGTCCCTCATGTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPAEIVL*SLMWLN
Trigger: GTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGC...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCCAAGGAGGAGCCAGGTaGCTACATTTGGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPQGGAR*LHLGDK
Trigger: TTTATCCCCCAAATGTAGGCACCTGGCTCCTCCTTG...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCATCCCCTGTTCTCTTTaGATTTGCCCCCACCATGCA +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTIPCSL*ICPHHA
Trigger: TGCATGGTGGGGGCAAATGCAAAGAGAACAGGGGAT...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497081.6
CDS-3UTR CCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTACACTCATGGAGACCATaGGTGTCCAGGGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLHSWRP*VSRGGK
Trigger: CTTTCCTCCCCTGGACACCCATGGTCTCCATGAGTG...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCTATGCATGCCTACCTTaGCTGTGGCTGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTYACLP*LWLFQG
Trigger: ACCCTGAAACAGCCACAGCCAAGGTAGGCATGCATA...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAAACTTACTGAGCCATTaGATCTCTTCTGGAAAACCG +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRNLLSH*ISSGKP
Trigger: CGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGAACTTACTGAGCCATTaGATCTCTTCTGGAAAACCG +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQNLLSH*ISSGKP
Trigger: CGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTATCCACTGGGCCCAGTTaGTGCCATTGGCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLSTGPS*CHWHKR
Trigger: TCTCTTATGCCAATGGCATCAACTGGGCCCAGTGGA...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGGAAGACCTCATATaGATGCCTACCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLGEDLI*MPTLAV
Trigger: CACAGCCAAGGTAGGCATGCATATGAGGTCTTCCCC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAAGAGAACTCCTTGTaGCTTCATAGTGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTQENSL*LHSALC
Trigger: ACAGAGGGCACTATGAAGGCACAAGGAGTTCTCTTG...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR GCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCTGTTCTCTTTGCATTTaGCCCCACCATGCATGCACA +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPCSLCI*PHHACT
Trigger: TGTGCATGCATGGTGGGGGCAAATGCAAAGAGAACA...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497081.6
CDS-3UTR CCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAACACCCAGAGGGTATaGGGAAGACCTCATATGCAT +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPNTQRV*GRPHMH
Trigger: ATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTT...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGCGGAAGAAACTTACTaGGCCATTGAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTAEETY*AIESLL
Trigger: CAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGAGTTCATTCAGGTTCTaGAGGTTTATTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQSSFRF*RFIETF
Trigger: GAAGGTCTCAATAAACCTTCAGAACCTGAATGAACT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGCAGAGATTGTCCTCTaGTCCCTCATGTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLAEIVL*SLMWLN
Trigger: GTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATATATGTTTGTGTGTATaGAGCCAGTTCATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNICLCV*SQFIQV
Trigger: AACCTGAATGAACTGGCTTCATACACACAAACATAT...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAATTACACTGTCTTTTTaGCATCAAAATGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRITLSF*HQNEAC
Trigger: ACAGGCCTCATTTTGATGGCAAAAAGACAGTGTAAT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATATTACACTGTCTTTTTaGCATCAAAATGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VAWLRATRPPCKELVLGNITLSF*HQNEAC
Trigger: ACAGGCCTCATTTTGATGGCAAAAAGACAGTGTAAT...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAAACACCCAGAGGGTATaGGGAAGACCTCATATGCAT +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLNTQRV*GRPHMH
Trigger: ATGCATATGAGGTCTTCCCCATACCCTCTGGGTGTT...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
3UTR CAA 72 bp TGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATaGAGACCTTCAGTCCCTACCCACTCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CMKPVHSGSEGL*RPSVPTHSQPC
Trigger: GCAGGGCTGGGAGTGGGTAGGGACTGAAGGTCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGCGGAAGAAACTTACTaGGCCATTGAATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLAEETY*AIESLL
Trigger: CAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCAGTTCATTCAGGTTCTaGAGGTTTATTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTSSFRF*RFIETF
Trigger: GAAGGTCTCAATAAACCTTCAGAACCTGAATGAACT...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCATATGTTTGTGTGTATaGAGCCAGTTCATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPICLCV*SQFIQV
Trigger: AACCTGAATGAACTGGCTTCATACACACAAACATAT...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp CAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCATTACACTGTCTTTTTaGCATCAAAATGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QPCRDCPLLPHVAKPLNTITLSF*HQNEAC
Trigger: ACAGGCCTCATTTTGATGGCAAAAAGACAGTGTAAT...GGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAGGCCCGAGGGGTAGATaGGGTACACGCCGTCTGACT +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRGPRGR*GTRRLT
Trigger: AGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCC...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAGGGATGTGGCATGGCTaGGAGCCACAAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRGMWHG*EPQGPL
Trigger: AAGGGGGCCTTGTGGCTCTCAGCCATGCCACATCCC...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGATGGCAAAGTGGCAGCTaGGGAACCAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRWQSGS*GTRRLL
Trigger: CAGGAGCCTTCTGGTTCCGCAGCTGCCACTTTGCCA...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGACTTAGCACACTAGGGTaGCCCAGACAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRLSTLG*PRQGST
Trigger: TGTGGACCCCTGTCTGGGCCACCCTAGTGTGCTAAG...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGACTAGGTAGAAGCCATTaGGGTTGGCAAAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRLGRSH*GWQSGS
Trigger: GCTGCCACTTTGCCAACCTCAATGGCTTCTACCTAG...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGACCAGGAGTGCCTTCATaGTGTCAGTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRPGVPS*CQFCSE
Trigger: CTCTGAGCAGAACTGACAGCATGAAGGCACTCCTGG...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299610.5
CDS-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGACTTGTAAGGAGTTGGTaGTCGGGAATCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRLVRSW*SGISRS
Trigger: GCTTCTGCTGATTCCCGAGCACCAACTCCTTACAAG...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR GCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAAAGACCTCATATGCATaGCTACCTTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRKTSYA*LPWLWL
Trigger: CAGCCACAGCCAAGGTAGGCATGCATATGAGGTCTT...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAAGTTCATTCAGGTTCTaGAGGTTTATTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRSSFRF*RFIETF
Trigger: GAAGGTCTCAATAAACCTTCAGAACCTGAATGAACT...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR TCA 90 bp AATATGTTTGTGTGTATGAAGCCAGTTCATTCAGGTTCTGAAGGTTTATTGAGAATATGTTTGTGTGTATaGAGCCAGTTCATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: NMFVCMKPVHSGSEGLLRICLCV*SQFIQV
Trigger: AACCTGAATGAACTGGCTTCATACACACAAACATAT...TCTCAATAAACCTTCAGAACCTGAATGAACTGGCTTCATACACACAAACATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS CCA 90 bp GCTGGTCAACAAGGACCTGGCCCTGGGGCAGCCCCTCAGCCCACCTaGTCCCTGCCTTACCCAGCCAGTACTCTCCATCAGCACGGCCGA +
Preference number: 5 (lower is better)
Translates to: AGQQGPGPGAAPQPT*SLPYPASTLHQHGR
Trigger: TCGGCCGTGCTGATGGAGAGTACTGGCTGGGTAAGGCAGGGACCAGGTGGGCTGAGGGGCTGCCCCAGGGCCAGGTCCTTGTTGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571210.1
CDS GCA 90 bp CAGCAGCGGCAGGGCCAGGAGTGCGAGTTTCAAGAGAACTCCTTGTaGCTTCATAGTGCCCTCTGTGGCCAGGGGCCTCTGGAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: QQRQGQECEFQENSL*LHSALCGQGPLEWA
Trigger: AGCCCACTCCAGAGGCCCCTGGCCACAGAGGGCACTATGAAGGCACAAGGAGTTCTCTTGAAACTCGCACTCCTGGCCCTGCCGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR CAA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGACCTGGCTGTCAGCTGTaGGGACAGGTTGGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGPGCQL*GQVGGN
Trigger: GTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGG...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS TCA 90 bp TGTCACAGAAGACGGGCACAGGCACACTGGGGCCCGAGGGGTAGATaGGGTACACGCCGTCTGACTGGTAGCCCTGGGCATAGATGTCGT +
Preference number: 5 (lower is better)
Translates to: CHRRRAQAHWGPRGR*GTRRLTGSPGHRCR
Trigger: ACGACATCTATGCCCAGGGCTACCAGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCCCCAGTGTGCCTGTGCCCGTCTTCTGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS CCA 90 bp CTCATACTTCTGCTTCAGTGTCAGGAGGTGCATGTTCTGCAGCCCTaGGGAGGAGGGGCAGCTGGTCAACAAGGACCTGGCCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LILLLQCQEVHVLQP*GGGAAGQQGPGPGA
Trigger: TGCCCCAGGGCCAGGTCCTTGTTGACCAGCTGCCCCTCCTCCCCAGGGCTGCAGAACATGCACCTCCTGACACTGAAGCAGAAGTATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571210.1
CDS GCA 90 bp GCCATCCTCAAAGCCTGCCACAAAGAGGGTGTAGCCATCCTCCTCTaGGCTGACCGCGTTCGGGGAGATGGAGAAGTCAGCGTACTTGGC +
Preference number: 5 (lower is better)
Translates to: AILKACHKEGVAILL*ADRVRGDGEVSVLG
Trigger: GCCAAGTACGCTGACTTCTCCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTACACCCTCTTTGTGGCAGGCTTTGAGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACCCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHPPCKE*VLGNQQ
Trigger: CTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGG...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp GTGGCATGGCTGAGAGCCACAAGGCCCCCTTGTAAGGAGTTGGTGCTCGGGAATCCTGGCTGTCAGCTGTaGGGACAGGTTGGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: VAWLRATRPPCKELVLGNPGCQL*GQVGGN
Trigger: GTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGG...ATTCCCGAGCACCAACTCCTTACAAGGGGGCCTTGTGGCTCTCAGCCATGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS TCA 90 bp CCTCAAAGCCTGCCACAAAGAGGGTGTAGCCATCCTCCTCTGCGCTaGCCGCGTTCGGGGAGATGGAGAAGTCAGCGTACTTGGCATAGG +
Preference number: 5 (lower is better)
Translates to: PQSLPQRGCSHPPLR*PRSGRWRSQRTWHR
Trigger: CCTATGCCAAGTACGCTGACTTCTCCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTACACCCTCTTTGTGGCAGGCTTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS GCA 90 bp CAGCTGCGGAACCAGAAGGCTCCTGAGGAGAGAGCTGCGCAGTTCTaGACAAAGAGGTCCTGGTCCCGGTCGAAGGTAGAGAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: QLRNQKAPEERAAQF*TKRSWSRSKVENFW
Trigger: CCAGAAGTTCTCTACCTTCGACCGGGACCAGGACCTCTTTGTGCAGAACTGCGCAGCTCTCTCCTCAGGAGCCTTCTGGTTCCGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAAGCTGTTGGGACAGGTaGGAGGCAACTCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGSCWDR*EATHSH
Trigger: ATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCT...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGATATGCATGCCTACCTaGGCTGTGGCTGTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLICMPT*AVAVSG
Trigger: CCCTGAAACAGCCACAGCCAAGGTAGGCATGCATAT...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGCTGTTCTCTTTGCATTaGCCCCCACCATGCATGCAC +
Preference number: 5 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLLFSLH*PPPCMH
Trigger: GTGCATGCATGGTGGGGGCAAATGCAAAGAGAACAG...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497081.6
CDS-3UTR CAA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAGATCCCCTGTTCTCTTaGCATTTGCCCCCACCATGC +
Preference number: 5 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRDPLFS*HLPPPC
Trigger: GCATGGTGGGGGCAAATGCAAAGAGAACAGGGGATC...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497081.6
CDS TCA 90 bp TGCCATTGGCATAAGAGAGGTGGGAGCCACCTAGGTAGAAGCCATTaGGGTTGGCAAAGTGGCAGCTGCGGAACCAGAAGGCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: CHWHKRGGSHLGRSH*GWQSGSCGTRRLLR
Trigger: CCTCAGGAGCCTTCTGGTTCCGCAGCTGCCACTTTGCCAACCTCAATGGCTTCTACCTAGGTGGCTCCCACCTCTCTTATGCCAATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCCCCCCTTGTAAGGAGTaGGTGCTCGGGAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPPPCKE*VLGNQQ
Trigger: CTGCTGATTCCCGAGCACCAACTCCTTACAAGGGGG...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACAGCTGTTGGGACAGGTaGGAGGCAACTCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHSCWDR*EATHSH
Trigger: ATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CGGGGTAGGACACCATCAGCAGGGGAGCAAGGAGGAGCCAGGTGCCTACATTTGAGCTGTTGGGACAGGTaGGAGGCAACTCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: RGRTPSAGEQGGARCLHLSCWDR*EATHSH
Trigger: ATGAGAATGAGTTGCCTCCAACCTGTCCCAACAGCT...CAAATGTAGGCACCTGGCTCCTCCTTGCTCCCCTGCTGATGGTGTCCTACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp GCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGATATGCATGCCTACCTaGGCTGTGGCTGTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: AGLWPRIHHGPCSHCTAQICMPT*AVAVSG
Trigger: CCCTGAAACAGCCACAGCCAAGGTAGGCATGCATAT...CTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CAGGTCCAGGCTAGAACCATGTGCCTCTCGGAAGAGGCCTGGGGAACTGCTGGCGGTTCTGAAGGTTTATaGAGACCTTCAGTCCCTACC +
Preference number: 5 (lower is better)
Translates to: QVQARTMCLSEEAWGTAGGSEGL*RPSVPT
Trigger: GGTAGGGACTGAAGGTCTCAATAAACCTTCAGAACC...GCCAGCAGTTCCCCAGGCCTCTTCCGAGAGGCACATGGTTCTAGCCTGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGTCACAGTCCAGGGGTaGCTGAAGGCAAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTVTVQG*LKAKPL
Trigger: GAGAGGTTTTGCCTTCAGCAACCCCTGGACTGTGAC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTACCTGGCTGTCAGCTGTaGGGACAGGTTGGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLPGCQL*GQVGGN
Trigger: GTTGCCTCCAACCTGTCCCAACAGCTGACAGCCAGG...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp GGTGGGCTGGGGTTCCACGGTACTCACCACAGGGGAGTAAGTTGGTGGGAGGGAGCCAGGTGCCTACATTaGGGGGATAAACAAATATGT +
Preference number: 5 (lower is better)
Translates to: GGLGFHGTHHRGVSWWEGARCLH*GDKQIC
Trigger: ACATATTTGTTTATCCCCCAAATGTAGGCACCTGGC...TCCCTCCCACCAACTTACTCCCCTGTGGTGAGTACCGTGGAACCCCAGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS TCA 90 bp GCCGAAGCCCAGCTTGTAGTCATTCCAGCCGCGGAAGAAACTTACTaGGCCATTGAATCTCTTCTGGAAAACCGTCCACTTCCCGCCCTC +
Preference number: 5 (lower is better)
Translates to: AEAQLVVIPAAEETY*AIESLLENRPLPAL
Trigger: GAGGGCGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGGCTGGAATGACTACAAGCTGGGCTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGGTTCTGAAGGTTTATaGAGACCTTCAGTCCCTACC +
Preference number: 5 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRGSEGL*RPSVPT
Trigger: GGTAGGGACTGAAGGTCTCAATAAACCTTCAGAACC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS TCA 90 bp CCAGCTTGTAGTCATTCCAGCCGCGGAAGAAACTTACTGAGCCATTaGATCTCTTCTGGAAAACCGTCCACTTCCCGCCCTCGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PACSHSSRGRNLLSH*ISSGKPSTSRPRWS
Trigger: TGACCACCGAGGGCGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGGCTGGAATGACTACAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGTCACAGTCCAGGGGTaGCTGAAGGCAAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLVTVQG*LKAKPL
Trigger: GAGAGGTTTTGCCTTCAGCAACCCCTGGACTGTGAC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp GTGGCCCAGACAGGGGTCCACAGTGAGGAAGCAGGACAAGATGGACCACAAAGGGCCAGGTGCCTACATTaGGGGGATAAACAAATATGT +
Preference number: 5 (lower is better)
Translates to: VAQTGVHSEEAGQDGPQRARCLH*GDKQIC
Trigger: ACATATTTGTTTATCCCCCAAATGTAGGCACCTGGC...CCTTTGTGGTCCATCTTGTCCTGCTTCCTCACTGTGGACCCCTGTCTGGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS CCA 90 bp TCATTCCAGCCGCGGAAGAAACTTACTGAGCCATTGAATCTCTTCTaGAAAACCGTCCACTTCCCGCCCTCGGTGGTCATGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: SFQPRKKLTEPLNLF*KTVHFPPSVVMSQK
Trigger: CTTCTGTGACATGACCACCGAGGGCGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGGCTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS-3UTR CAA 90 bp CAGCCCAGAGGAGTGCTGGGCTGTGGCCTAGAATACACCATGGGCCCTGTTCACAAACTTACTGAGCCATaGAATCTCTTCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: QPRGVLGCGLEYTMGPVHKLTEP*NLFWKT
Trigger: GGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTT...GTGAACAGGGCCCATGGTGTATTCTAGGCCACAGCCCAGCACTCCTCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CCCAGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACAGGTTCTGAAGGTTTATaGAGACCTTCAGTCCCTACC +
Preference number: 5 (lower is better)
Translates to: PSPAEIVLCSLMWLNLSTGSEGL*RPSVPT
Trigger: GGTAGGGACTGAAGGTCTCAATAAACCTTCAGAACC...TGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCTTTCAAGAGAACTCCTaGTGCCTTCATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPFQENS*CLHSAL
Trigger: GAGGGCACTATGAAGGCACAAGGAGTTCTCTTGAAA...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS-3UTR CAA 90 bp CATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGGGTGGCCCAGAAAACTTACTGAGCCATaGAATCTCTTCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: HGPCSHCTAQLSTLGWPRKLTEP*NLFWKT
Trigger: GGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTT...TCTGGGCCACCCTAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp AGCCCTGCAGAGATTGTCCTCTGCTCCCTCATGTGGCTAAACCTCTCAACACCCAAACTTACTGAGCCATaGAATCTCTTCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: SPAEIVLCSLMWLNLSTPKLTEP*NLFWKT
Trigger: GGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTT...GGGTGTTGAGAGGTTTAGCCACATGAGGGAGCAGAGGACAATCTCTGCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS-3UTR CAA 90 bp CCTAGAATACACCATGGGCCCTGTTCACACTGCACTGCTCAGCTTAGCACACTAGCCAGGTGCCTACATTaGGGGGATAAACAAATATGT +
Preference number: 5 (lower is better)
Translates to: PRIHHGPCSHCTAQLSTLARCLH*GDKQIC
Trigger: ACATATTTGTTTATCCCCCAAATGTAGGCACCTGGC...TAGTGTGCTAAGCTGAGCAGTGCAGTGTGAACAGGGCCCATGGTGTATTCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
CDS TCA 72 bp AGACGGGCACAGGCACACTGGGGCCCGAGGGGTAGATaGGGTACACGCCGTCTGACTGGTAGCCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: RRAQAHWGPRGR*GTRRLTGSPGH
Trigger: ATGCCCAGGGCTACCAGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCCCCAGTGTGCCTGTGCCCGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS TCA 72 bp ACTGGGGCCCGAGGGGTAGATGAGGTACACGCCGTCTaGCTGGTAGCCCTGGGCATAGATGTCGTCACAGTC +
Preference number: 6 (lower is better)
Translates to: TGARGVDEVHAV*LVALGIDVVTV
Trigger: GACTGTGACGACATCTATGCCCAGGGCTACCAGTCAGACGGCGTGTACCTCATCTACCCCTCGGGCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS CAA 72 bp CGGCAGGGCCAGGAGTGCGAGTTTCAAGAGAACTCCTaGTGCCTTCATAGTGCCCTCTGTGGCCAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: RQGQECEFQENS*CLHSALCGQGP
Trigger: AGGCCCCTGGCCACAGAGGGCACTATGAAGGCACAAGGAGTTCTCTTGAAACTCGCACTCCTGGCCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS TCA 72 bp CTGCCACAAAGAGGGTGTAGCCATCCTCCTCTGCGCTaGCCGCGTTCGGGGAGATGGAGAAGTCAGCGTACT +
Preference number: 6 (lower is better)
Translates to: LPQRGCSHPPLR*PRSGRWRSQRT
Trigger: AGTACGCTGACTTCTCCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTACACCCTCTTTGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS GCA 72 bp AAAGCCTGCCACAAAGAGGGTGTAGCCATCCTCCTCTaGGCTGACCGCGTTCGGGGAGATGGAGAAGTCAGC +
Preference number: 6 (lower is better)
Translates to: KACHKEGVAILL*ADRVRGDGEVS
Trigger: GCTGACTTCTCCATCTCCCCGAACGCGGTCAGCGCAGAGGAGGATGGCTACACCCTCTTTGTGGCAGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS GCA 72 bp CAGGGCCAGGAGTGCGAGTTTCAAGAGAACTCCTTGTaGCTTCATAGTGCCCTCTGTGGCCAGGGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: QGQECEFQENSL*LHSALCGQGPL
Trigger: CAGAGGCCCCTGGCCACAGAGGGCACTATGAAGGCACAAGGAGTTCTCTTGAAACTCGCACTCCTGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395592.6
CDS CCA 72 bp ATCTCTTCTGGAAAACCGTCCACTTCCCGCCCTCGGTaGTCATGTCACAGAAGACGGGCACAGGCACACTGG +
Preference number: 6 (lower is better)
Translates to: ISSGKPSTSRPR*SCHRRRAQAHW
Trigger: CCAGTGTGCCTGTGCCCGTCTTCTGTGACATGACCACCGAGGGCGGGAAGTGGACGGTTTTCCAGAAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS CCA 72 bp GAGGAGAGAGCTGCGCAGTTCTGCACAAAGAGGTCCTaGTCCCGGTCGAAGGTAGAGAACTTCTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: EERAAQFCTKRS*SRSKVENFWPL
Trigger: CAGTGGCCAGAAGTTCTCTACCTTCGACCGGGACCAGGACCTCTTTGTGCAGAACTGCGCAGCTCTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS CAA 72 bp GTAGCCCTGGGCATAGATGTCGTCACAGTCCAGGGGTaGCTGAAGGCAAAACCTCTCCAGAGCATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: VALGIDVVTVQG*LKAKPLQSISS
Trigger: CGAGGAGATGCTCTGGAGAGGTTTTGCCTTCAGCAACCCCTGGACTGTGACGACATCTATGCCCAGGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS CCA 72 bp CCGCGGAAGAAACTTACTGAGCCATTGAATCTCTTCTaGAAAACCGTCCACTTCCCGCCCTCGGTGGTCATG +
Preference number: 6 (lower is better)
Translates to: PRKKLTEPLNLF*KTVHFPPSVVM
Trigger: CATGACCACCGAGGGCGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS TCA 72 bp AGTCATTCCAGCCGCGGAAGAAACTTACTGAGCCATTaGATCTCTTCTGGAAAACCGTCCACTTCCCGCCCT +
Preference number: 6 (lower is better)
Translates to: SHSSRGRNLLSH*ISSGKPSTSRP
Trigger: AGGGCGGGAAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGGCTGGAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1
CDS TCA 72 bp CAGCTTGTAGTCATTCCAGCCGCGGAAGAAACTTACTaGGCCATTGAATCTCTTCTGGAAAACCGTCCACTT +
Preference number: 6 (lower is better)
Translates to: QLVVIPAAEETY*AIESLLENRPL
Trigger: AAGTGGACGGTTTTCCAGAAGAGATTCAATGGCTCAGTAAGTTTCTTCCGCGGCTGGAATGACTACAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299610.5
ENST00000395592.6
ENST00000497081.6
ENST00000571210.1