RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MFAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000037749

Ensembl transcript IDs: ENST00000322602.9, ENST00000439768.2, ENST00000518497.6, ENST00000519325.1, ENST00000519612.5, ENST00000519928.2, ENST00000520327.6, ENST00000520899.1, ENST00000521527.5, ENST00000522177.1, ENST00000522440.5, ENST00000522782.6, ENST00000679729.1, ENST00000681641.1

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTACTTGCTGGTGTGTGGAGACTAGGCTAGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCATGCAGTGCTCCTGTGCCATCTGGGA +
Preference number: 1 (lower is better)
Translates to: STCWCVETRLAPMTG*ALENKHAVLLCHLG
Trigger: TCCCAGATGGCACAGGAGCACTGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR GCA 90 bp TACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: YWYSGNIYTIHLGST*WCVETRLAPMTGWA
Trigger: AGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTaGTGTGTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTA +
Preference number: 1 (lower is better)
Translates to: WYSGNIYTIHLGSTC*CVETRLAPMTGWAL
Trigger: TAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR TCA 90 bp CAGAGCAGATGTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCTTTGAATTTCCTGTCTTCCCCTGTT +
Preference number: 1 (lower is better)
Translates to: QSRCITSDKPGQREA*VLSRHALNFLSSPV
Trigger: AACAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATACATCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR TCA 90 bp GAGGTGTCCCAGAGGAGGTTAGCGGACTGCTTGTTAAGCATTACTTaGGTGCCCAATCTTCAAAATCTCTTTCATCCCCAAGATTCTATG +
Preference number: 1 (lower is better)
Translates to: EVSQRRLADCLLSIT*VPNLQNLFHPQDSM
Trigger: CATAGAATCTTGGGGATGAAAGAGATTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAGCAGTCCGCTAACCTCCTCTGGGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
3UTR TCA 90 bp GAAATGACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTG +
Preference number: 1 (lower is better)
Translates to: EMTAALRLCINTFGF*LKVDRNLNCYFLAL
Trigger: CAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR CCA 90 bp ACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTaGGGCATCAGCTCAATTAATACCTGTCTATCTGGCTTCAGCTGG +
Preference number: 1 (lower is better)
Translates to: TIWRTGSYQTVYKLK*GISSINTCLSGFSW
Trigger: CCAGCTGAAGCCAGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR GCA 90 bp CTGACAGTTTTCATATGCCCCATCTTTGTAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: LTVFICPIFVVTVRF*RSYIIRWTEMTAAL
Trigger: CAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCTGCAGAATCTAACTGTAACTACAAAGATGGGGCATATGAAAACTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR GCA 90 bp GGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACAGTTAGATTCTGCAGATCCTATATC +
Preference number: 1 (lower is better)
Translates to: GTGLQHCRLQLTVFI*PIFVVTVRFCRSYI
Trigger: GATATAGGATCTGCAGAATCTAACTGTAACTACAAAGATGGGGCATATGAAAACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR TCA 90 bp CTTAAAGAAATACCAGTCTATGAGCCAAGGCAAGCTTTGGCTAAATaGTTGGTTAGCTTTTATTTGGCTCTAGAGGTTTCCATGGAAACA +
Preference number: 1 (lower is better)
Translates to: LKEIPVYEPRQALAK*LVSFYLALEVSMET
Trigger: TGTTTCCATGGAAACCTCTAGAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAGCTTGCCTTGGCTCATAGACTGGTATTTCTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR CCA 90 bp ATCTTTGTAGTTACAGTTAGATTCTGCAGATCCTATATCATCAGGTaGACTGAAATGACTGCTGCCTTGAGACTCTGTATCAATACTTTT +
Preference number: 1 (lower is better)
Translates to: IFVVTVRFCRSYIIR*TEMTAALRLCINTF
Trigger: AAAAGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCTGCAGAATCTAACTGTAACTACAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLPAVWG*IPMTRG
Trigger: TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGCCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 2 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 2 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 2 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 2 (lower is better)
Translates to: VETRLAPMTGWALENKHAGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 2 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 2 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCAGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 2 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 2 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGCCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMPAVWG*IPMTRG
Trigger: TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGG...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTATCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 2 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 2 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTCAGGAGCCTCTAGCTaGAGTAATGCTTCAATAATC +
Preference number: 2 (lower is better)
Translates to: KAGGSFEATSTRSAWATKSGASS*SNASII
Trigger: GATTATTGAAGCATTACTTCAGCTAGAGGCTCCTGA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCACTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 2 (lower is better)
Translates to: VETRLAPMTGWALENKHALTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
3UTR-3UTR CCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGCAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLQVSAS*KGYKSS
Trigger: GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTG...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 2 (lower is better)
Translates to: RSYIIRWTEMTAALRLCIVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR CAA 90 bp GGAGGTGTCCCAGAGGAGGTTAGCGGACTGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAATCTCTTTCATCCCCAAGATTCTAT +
Preference number: 2 (lower is better)
Translates to: GGVPEEVSGLLVKHY*SAQSSKSLSSPRFY
Trigger: ATAGAATCTTGGGGATGAAAGAGATTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAGCAGTCCGCTAACCTCCTCTGGGACACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
3UTR-3UTR TCA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCAAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 2 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 2 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTATCATATGAAGAAACGTaGAGCCCCAAATGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVSYEET*SPKWSS
Trigger: GGAGCTCCATTTGGGGCTTCACGTTTCTTCATATGA...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAGCTACATGCAGAGGGTaGAGAGGACTATACCAACAG +
Preference number: 2 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAATCRG*RGLYQQ
Trigger: CTGTTGGTATAGTCCTCTTCACCCTCTGCATGTAGC...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 2 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGINTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 2 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 2 (lower is better)
Translates to: VETRLAPMTGWALENKHANPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTTAATTCCTCATCAATaGCACCATAAGCTGGTACAC +
Preference number: 2 (lower is better)
Translates to: KAGGSFEATSTRSAWATKLIPHQ*HHKLVH
Trigger: GTGTACCAGCTTATGGTGCCATTGATGAGGAATTAA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 2 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 2 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 2 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 2 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 2 (lower is better)
Translates to: KAGGSFEATSTRSAWATKWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 2 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTACACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 2 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: KAGGSFEATSTRSAWATKREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 2 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 2 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 2 (lower is better)
Translates to: VDRNLNCYFLALFIQRAINLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 2 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLRHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 2 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGCACGCTTCCTGTAGCTaGAGAAATTGTTCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWHASCS*RNCSEE
Trigger: CTCTTCAGAACAATTTCTTCAGCTACAGGAAGCGTG...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 2 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 2 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGITLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGCACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGG +
Preference number: 2 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVHLGST*WCVETR
Trigger: CCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTG...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCTCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: RVLNNNVSYENMWGKTILSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 2 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 2 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCAT +
Preference number: 2 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVAPMTG*ALENKH
Trigger: ATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGC...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 90 bp AATGCATTCTCTTACTGGTACTCAGGAAATATTTATACAATACACTaGGGTTCTACTTGCTGGTGTGTGGAGACTAGGCTAGCACCCATG +
Preference number: 2 (lower is better)
Translates to: NAFSYWYSGNIYTIH*GSTCWCVETRLAPM
Trigger: CATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTACCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 2 (lower is better)
Translates to: GTISWYTQSKPVTLATKLPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: RVLNNNVSYENMWGKTILRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 2 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 2 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCAGCCAGGAAAGGTGGTaGACACCTGTAGTCCTAGCT +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSSQERW*TPVVLA
Trigger: AGCTAGGACTACAGGTGTGCACCACCTTTCCTGGCT...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTG +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWRLLQT*YVRTGL
Trigger: CAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCT...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAAGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 2 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTATTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTATCCCGTCACGCTTTaGATTTCCTGTCTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSYPVTL*ISCLPL
Trigger: CAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 2 (lower is better)
Translates to: GTISWYTQSKPVTLATKLNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAATATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 2 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 2 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGCAAATGGAGCTCCACTaGCAAGTTCTTAAAATTATA +
Preference number: 2 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTQMELH*QVLKII
Trigger: TATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTG...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 2 (lower is better)
Translates to: GTISWYTQSKPVTLATKLKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 2 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 2 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 2 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 2 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 2 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCCCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 2 (lower is better)
Translates to: HNYLILFQVSASWKGYKSPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 2 (lower is better)
Translates to: TQFGGQAVIKQSINSSGANLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTCCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 2 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTTCAGGAGCCTCTAGCTaGAGTAATGCTTCAATAATC +
Preference number: 2 (lower is better)
Translates to: QTVYKLKWGISSINTCLSSGASS*SNASII
Trigger: GATTATTGAAGCATTACTTCAGCTAGAGGCTCCTGA...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTATGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 2 (lower is better)
Translates to: GTISWYTQSKPVTLATKLWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 2 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSNPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGGGTAGAAAATATAAATaGGTGCTGGCCCTGACTCAA +
Preference number: 2 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVGRKYK*VLALTQ
Trigger: TTGAGTCAGGGCCAGCACGCATTTATATTTTCTACC...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 90 bp CTCAGCCAGGCAAGAAATGTCATCATAAGTGTTTATTATATACAGTaGAAGCAGGTGGCATCATCCATCATTTTTCTTCCTCTTGATGTC +
Preference number: 2 (lower is better)
Translates to: LSQARNVIISVYYIQ*KQVASSIIFLPLDV
Trigger: GACATCAAGAGGAAGAAAAATGATGGATGATGCCACCTGCTTCAACTGTATATAATAAACACTTATGATGACATTTCTTGCCTGGCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 2 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGAATGGCACCATAAGCTaGTACACTCAAAGTAAACCA +
Preference number: 2 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVNGTIS*YTQSKP
Trigger: TGGTTTACTTTGAGTGTACCAGCTTATGGTGCCATT...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTATATACATACACAATTTaGAGGACAGGCAGTTATCAA +
Preference number: 2 (lower is better)
Translates to: GTISWYTQSKPVTLATKLYTYTI*RTGSYQ
Trigger: TTGATAACTGCCTGTCCTCCAAATTGTGTATGTATA...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCTCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 2 (lower is better)
Translates to: HNYLILFQVSASWKGYKSSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 2 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 2 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 2 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 2 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCGTTCTTAAAATTATATaGCACCACGCTTCCTGTAGC +
Preference number: 2 (lower is better)
Translates to: RVLNNNVSYENMWGKTILVLKII*HHASCS
Trigger: GCTACAGGAAGCGTGGTGCCATATAATTTTAAGAAC...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR TCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 2 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLARHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR TCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 2 (lower is better)
Translates to: HNYLILFQVSASWKGYKSRHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCCTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 2 (lower is better)
Translates to: RVLNNNVSYENMWGKTILLWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSNPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCAAATGGAGCTCCACTaGCAAGTTCTTAAAATTATA +
Preference number: 2 (lower is better)
Translates to: NYLILFQVSASWKGYKSSQMELH*QVLKII
Trigger: TATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTG...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR GCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTCAAATGGAGCTCCACTaGCAAGTTCTTAAAATTATA +
Preference number: 2 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAQMELH*QVLKII
Trigger: TATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTG...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTCTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 2 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLALWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTTATACATACACAATTTaGAGGACAGGCAGTTATCAA +
Preference number: 2 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAYTYTI*RTGSYQ
Trigger: TTGATAACTGCCTGTCCTCCAAATTGTGTATGTATA...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR TCA 72 bp ACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATaGCTAGAGGAGGTGTCCCAGAGGAGGTTAGCGGAC +
Preference number: 3 (lower is better)
Translates to: TTFHLQCGDAFQ*LEEVSQRRLAD
Trigger: GTCCGCTAACCTCCTCTGGGACACCTCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR GCA 72 bp AGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATaGAGTGCTCCTGTGCCATCTGGGACCCAAGAGACA +
Preference number: 3 (lower is better)
Translates to: STHDWLGSRKQA*SAPVPSGTQET
Trigger: TGTCTCTTGGGTCCCAGATGGCACAGGAGCACTGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CCA 72 bp TGGTGTGTGGAGACTAGGCTAGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCATGCAGTGCTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: WCVETRLAPMTG*ALENKHAVLLC
Trigger: GCACAGGAGCACTGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCACACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR GCA 72 bp TCAGAAACCAACCACTTTCCACCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGAGGTGTCCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: SETNHFPPAVWG*IPMTRGGVPEE
Trigger: CTCCTCTGGGACACCTCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 3 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 3 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR CCA 72 bp AGGGTGAAGAGGACTATACCAACAGCCTCACTTGTCTaGAGGAGCAAAAGGAAAGCCGTGCACAGATATTGC +
Preference number: 3 (lower is better)
Translates to: RVKRTIPTASLV*RSKRKAVHRYC
Trigger: GCAATATCTGTGCACGGCTTTCCTTTTGCTCCTCCAGACAAGTGAGGCTGTTGGTATAGTCCTCTTCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CAA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 3 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTACAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 3 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 3 (lower is better)
Translates to: VETRLAPMTGWALENKHANPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CAA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 3 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLLCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTACAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 3 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR TCA 72 bp TATGTTAGGACAGGGTTGAAAGTACTATCTGAAATCTaGGGGATGTTTAGAGGACTGACCCCCAGACAAGGG +
Preference number: 3 (lower is better)
Translates to: YVRTGLKVLSEI*GMFRGLTPRQG
Trigger: CCCTTGTCTGGGGGTCAGTCCTCTAAACATCCCTCAGATTTCAGATAGTACTTTCAACCCTGTCCTAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR CCA 72 bp GGAAATATTTATACAATACACTTGGGTTCTACTTGCTaGTGTGTGGAGACTAGGCTAGCACCCATGACTGGC +
Preference number: 3 (lower is better)
Translates to: GNIYTIHLGSTC*CVETRLAPMTG
Trigger: GCCAGTCATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CAA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 3 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGILCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGT +
Preference number: 3 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWRQEDH*KPQVQG
Trigger: ACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCT...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 3 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 3 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLLCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 3 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 3 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
3UTR-3UTR CAA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 3 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 3 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 3 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR TCA 72 bp TGTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCTTTGAATTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: CITSDKPGQREA*VLSRHALNFLS
Trigger: AGACAGGAAATTCAAAGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR TCA 72 bp GCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAACCTGAACTGCTATTTC +
Preference number: 3 (lower is better)
Translates to: AALRLCINTFGF*LKVDRNLNCYF
Trigger: GAAATAGCAGTTCAGGTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR GCA 72 bp TCAGGAAATATTTATACAATACACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGGCTAGCACCCATGACT +
Preference number: 3 (lower is better)
Translates to: SGNIYTIHLGST*WCVETRLAPMT
Trigger: AGTCATGGGTGCTAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CCA 72 bp AGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTaGGGCATCAGCTCAATTAATACCTGTCTATCTGGC +
Preference number: 3 (lower is better)
Translates to: RTGSYQTVYKLK*GISSINTCLSG
Trigger: GCCAGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CCA 72 bp GTTACAGTTAGATTCTGCAGATCCTATATCATCAGGTaGACTGAAATGACTGCTGCCTTGAGACTCTGTATC +
Preference number: 3 (lower is better)
Translates to: VTVRFCRSYIIR*TEMTAALRLCI
Trigger: GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCTGCAGAATCTAACTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTTTATCCCGTCACGCTTaGAATTTCCTGTCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: QTVYKLKWGISSINTCLSLSRHA*NFLSSP
Trigger: AGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAA...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CAA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTATGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR TCA 72 bp AGGTATAGAGCCCACGGTCATCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAGAAACCAACCACTTTC +
Preference number: 3 (lower is better)
Translates to: RYRAHGHQKLHW*CLGSYQKPTTF
Trigger: GAAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGACCGTGGGCTCTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 3 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 3 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 3 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 3 (lower is better)
Translates to: GTISWYTQSKPVTLATKLNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 3 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTATATGTTAGGACAGGGTaGAAAGTACTATCTGAAATC +
Preference number: 3 (lower is better)
Translates to: GTISWYTQSKPVTLATKLYVRTG*KVLSEI
Trigger: GATTTCAGATAGTACTTTCAACCCTGTCCTAACATA...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: NYLILFQVSASWKGYKSSCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAAAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 3 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR TCA 72 bp AAAGATTACTGCAAACCTGCTATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCTGAGGGATGTTTAGAG +
Preference number: 3 (lower is better)
Translates to: KDYCKPAMLGQG*KYYLKSEGCLE
Trigger: CTCTAAACATCCCTCAGATTTCAGATAGTACTTTCAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR GCA 72 bp TTCATATGCCCCATCTTTGTAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGGTGGACTGAAATGACT +
Preference number: 3 (lower is better)
Translates to: FICPIFVVTVRF*RSYIIRWTEMT
Trigger: AGTCATTTCAGTCCACCTGATGATATAGGATCTGCAGAATCTAACTGTAACTACAAAGATGGGGCATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 3 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: QTVYKLKWGISSINTCLSSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR-3UTR CAA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCGTTTATTATATACAGTaGAAGCAGGTGGCATCATCC +
Preference number: 3 (lower is better)
Translates to: RVLNNNVSYENMWGKTILVYYIQ*KQVASS
Trigger: GGATGATGCCACCTGCTTCAACTGTATATAATAAAC...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAGTTTATTATATACAGTaGAAGCAGGTGGCATCATCC +
Preference number: 3 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKVYYIQ*KQVASS
Trigger: GGATGATGCCACCTGCTTCAACTGTATATAATAAAC...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR GCA 72 bp CTTCTAATGAAGACTTTGGCAATTCACGTTCTGATGTaGTTAATATTAACAAACGGAAAACCCCAGTCATCT +
Preference number: 3 (lower is better)
Translates to: LLMKTLAIHVLM*LILTNGKPQSS
Trigger: AGATGACTGGGGTTTTCCGTTTGTTAATATTAAGCACATCAGAACGTGAATTGCCAAAGTCTTCATTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR-3UTR CAA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAACAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 3 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR CCA 72 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTA +
Preference number: 3 (lower is better)
Translates to: HNYLILFQVSAS*KGYKSSHSSEL
Trigger: TAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR GCA 72 bp TTTGACAAGCTATATTCTAAAAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTGAAAGTACTATCTGAA +
Preference number: 3 (lower is better)
Translates to: FDKLYSKRLLQT*YVRTGLKVLSE
Trigger: TTCAGATAGTACTTTCAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCTTTTAGAATATAGCTTGTCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCTCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCACACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 4 (lower is better)
Translates to: VETRLAPMTGWALENKHAHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGGTAGTCCTAGCTGCTTaGGAGGCTGAAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKVVLAA*EAEAGR
Trigger: TCGTCCTGCTTCAGCCTCCCAAGCAGCTAGGACTAC...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGTATCCCGTCACGCTTTaGATTTCCTGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWYPVTL*ISCLPL
Trigger: CAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATA...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGAACATTTTCGCCTCCTaGACTCCCGACCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLNIFAS*TPDPKP
Trigger: TGGCTTGGGGTCGGGAGTGCAGGAGGCGAAAATGTT...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR GCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCTCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGISCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLAPMTG*ALENKH
Trigger: ATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGC...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCTCAGGAGCCTCTAGCTaGAGTAATGCTTCAATAATC +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLSGASS*SNASII
Trigger: GATTATTGAAGCATTACTTCAGCTAGAGGCTCCTGA...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTATCCCGTCACGCTTTaGATTTCCTGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKYPVTL*ISCLPL
Trigger: CAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGATATCCCGTCACGCTTTaGATTTCCTGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGYPVTL*ISCLPL
Trigger: CAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATA...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCGCTACATGCAGAGGGTaGAGAGGACTATACCAACAG +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIATCRG*RGLYQQ
Trigger: CTGTTGGTATAGTCCTCTTCACCCTCTGCATGTAGC...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGACCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGPAVWG*IPMTRG
Trigger: TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGG...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCATCTAGAAAACAAGCATaGAGTGCTCCTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: VETRLAPMTGWALENKHASRKQA*SAPVPS
Trigger: AGATGGCACAGGAGCACTGCATGCTTGTTTTCTAGA...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGAGCTAGCACCCATGACTaGCTGGGCTCTAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGASTHD*LGSRKQ
Trigger: TTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGC...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR TCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCCACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGTCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLPAVWG*IPMTRG
Trigger: TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGAGCCAGGAAAGGTGGTaGACACCTGTAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTSQERW*TPVVLA
Trigger: AGCTAGGACTACAGGTGTGCACCACCTTTCCTGGCT...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCCATGCAGTGCTCCTGTaGCATCTGGGACCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTHAVLL*HLGPKR
Trigger: TCTCTTGGGTCCCAGATGGCACAGGAGCACTGCATG...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGTGCCTGGCAGGTATCTaGCTCTCAGTAAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLCLAGI*LSVSVR
Trigger: TCGAACACTTACTGAGAGCCAGATACCTGCCAGGCA...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR CCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWTSSSE*ELAESS
Trigger: TGAACTCTCAGCAAGTTCCCACTCGGATGATGATGT...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGTAGTCCTAGCTGCTTaGGAGGCTGAAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGVVLAA*EAEAGR
Trigger: TCGTCCTGCTTCAGCCTCCCAAGCAGCTAGGACTAC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTGTAGTCCTAGCTGCTTaGGAGGCTGAAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVVVLAA*EAEAGR
Trigger: TCGTCCTGCTTCAGCCTCCCAAGCAGCTAGGACTAC...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAACAGCCTCACTTGTCTaGAGGAGCAAAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLTASLV*RSKRKA
Trigger: GGCTTTCCTTTTGCTCCTCCAGACAAGTGAGGCTGT...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAGCTAGCACCCATGACTaGCTGGGCTCTAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLASTHD*LGSRKQ
Trigger: TTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGC...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 72 bp ATCTCAACACTTTGGGAGGTAAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: ISTLWEVRQEDH*KPQVQGQPGQQ
Trigger: TTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAAAGTGTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCTACTTGCCACTAAAGTaGATAAGCAACAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLYLPLK*ISNNVA
Trigger: AGCTACATTGTTGCTTATTCACTTTAGTGGCAAGTA...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGITICFQ*NHLVEV
Trigger: GACTTCGACCAAATGGTTTCACTGGAAGCAAATCGT...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCCACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGTATCCCGTCACGCTTTaGATTTCCTGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTYPVTL*ISCLPL
Trigger: CAGGGGAAGACAGGAAATTCAAAGCGTGACGGGATA...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGACCACTTTCCACCTCTaGTTCTGCCATCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTTTFHL*FCHPVA
Trigger: AGCAACTGGATGGCAGAAGCAGAGGTGGAAAGTGGT...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522782.6
CDS-3UTR GCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCATCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 4 (lower is better)
Translates to: VETRLAPMTGWALENKHAKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAGCCAGGAAAGGTGGTaGACACCTGTAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFSQERW*TPVVLA
Trigger: AGCTAGGACTACAGGTGTGCACCACCTTTCCTGGCT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGAGCCAGGAAAGGTGGTaGACACCTGTAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGSQERW*TPVVLA
Trigger: AGCTAGGACTACAGGTGTGCACCACCTTTCCTGGCT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTAGCCAGGAAAGGTGGTaGACACCTGTAGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSSQERW*TPVVLA
Trigger: AGCTAGGACTACAGGTGTGCACCACCTTTCCTGGCT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCCACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLHLGST*WCVETR
Trigger: CCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTG...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCAGACTTTCAAAAGAATaGCAAACATTTTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLRLSKE*QTFSPP
Trigger: AGGAGGCGAAAATGTTTGCCATTCTTTTGAAAGTCT...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679729.1
CDS-3UTR CCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTGCCTGGCAGGTATCTaGCTCTCAGTAAGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLCLAGI*LSVSVR
Trigger: TCGAACACTTACTGAGAGCCAGATACCTGCCAGGCA...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR CCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGTCATCAGGGTCGTCCACTCGCACAGCCTCAAACATCTCCTCAACAAAGGCTCGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GHQGRPLAQPQTSPQQRLGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...GAGCCTTTGTTGAGGAGATGTTTGAGGCTGTGCGAGTGGACGACCCTGATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGACAGCCTCACTTGTCTaGAGGAGCAAAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTTASLV*RSKRKA
Trigger: GGCTTTCCTTTTGCTCCTCCAGACAAGTGAGGCTGT...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTATTGGGTTCTACTTGCTaGTGTGTGGAGACTAGGCTA +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLLGSTC*CVETRL
Trigger: TAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAA...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGCATAGTGACTGGCTGTaGGAAGACACTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKHSDWL*EDTQLK
Trigger: TTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATG...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFRWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGAGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGCACGCTTCCTGTAGCTaGAGAAATTGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLHASCS*RNCSEE
Trigger: CTCTTCAGAACAATTTCTTCAGCTACAGGAAGCGTG...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTCATATGAAGAAACGTaGAGCCCCAAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMSYEET*SPKWSS
Trigger: GGAGCTCCATTTGGGGCTTCACGTTTCTTCATATGA...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAAAGTCTGATCTAGGGTaGAGCTACATGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSKSDLG*SYMQRV
Trigger: CACCCTCTGCATGTAGCTTCACCCTAGATCAGACTT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAAAGTCTGATCTAGGGTaGAGCTACATGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGKSDLG*SYMQRV
Trigger: CACCCTCTGCATGTAGCTTCACCCTAGATCAGACTT...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGCATTCCTGGCCTAGATaGGAAAAGAATGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKHSWPR*EKNAFS
Trigger: AGAGAATGCATTCTTTTCTCATCTAGGCCAGGAATG...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: VETRLAPMTGWALENKHAVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCAAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: VETRLAPMTGWALENKHAREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGCAAAAGGAAAGCCGTaGACAGATATTGCTTTGACC +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLAKGKP*TDIALT
Trigger: GGTCAAAGCAATATCTGTGCACGGCTTTCCTTTTGC...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCGCAAAAGGAAAGCCGTaGACAGATATTGCTTTGACC +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIAKGKP*TDIALT
Trigger: GGTCAAAGCAATATCTGTGCACGGCTTTCCTTTTGC...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR GCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAAAAACAAGCATGCAGTaGTCCTGTGCCATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSKTSMQ*SCAIWD
Trigger: GTCCCAGATGGCACAGGAGCACTGCATGCTTGTTTT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGTCTAGAAAACAAGCATaGAGTGCTCCTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLSRKQA*SAPVPS
Trigger: AGATGGCACAGGAGCACTGCATGCTTGTTTTCTAGA...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTACACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVHLGST*WCVETR
Trigger: CCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTG...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCACTTGGGTTCTACTTaGTGGTGTGTGGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLHLGST*WCVETR
Trigger: CCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCCAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSQVSAS*KGYKSS
Trigger: GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTG...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGTTAATTCCTCATCAATaGCACCATAAGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWLIPHQ*HHKLVH
Trigger: GTGTACCAGCTTATGGTGCCATTGATGAGGAATTAA...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCATGCTCCTGTGCCATCTaGGACCCAAGAGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSCSCAI*DPRDKS
Trigger: ACTTTTGTCTCTTGGGTCCCAGATGGCACAGGAGCA...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTGGGTTCTACTTGCTaGTGTGTGGAGACTAGGCTA +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLLGSTC*CVETRL
Trigger: TAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAA...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 72 bp ATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IAPYLRPQRAGG*TEVLRGIQFWV
Trigger: AACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLTICFQ*NHLVEV
Trigger: GACTTCGACCAAATGGTTTCACTGGAAGCAAATCGT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMTICFQ*NHLVEV
Trigger: GACTTCGACCAAATGGTTTCACTGGAAGCAAATCGT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGCATAGTGACTGGCTGTaGGAAGACACTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLHSDWL*EDTQLK
Trigger: TTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATG...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPQLLSF*IVPMDI
Trigger: GATGTCCATTGGCACAATTCAAAAGGACAGCAACTG...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGCACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAAGGTGGACAGAAACCTaGACTGCTATTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TQFGGQAVIKQSINSSGARWTET*TAISWP
Trigger: AGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCACCT...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTCCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTACCAATGGAAGAACTGTaGCCAGAAGAGAAACCATGG +
Preference number: 4 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVPMEEL*PEEKPW
Trigger: CCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGG...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCCCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGTTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCTCATATGAAGAAACGTaGAGCCCCAAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTSYEET*SPKWSS
Trigger: GGAGCTCCATTTGGGGCTTCACGTTTCTTCATATGA...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAAGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCAGCGGGTAATTTATTaGTTGGTAGAGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLQRVIY*LVEKFS
Trigger: GGAAAATTTCTCTACCAAGCAATAAATTACCCGCTG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCACCACTTTCCACCTCTaGTTCTGCCATCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSTTFHL*FCHPVA
Trigger: AGCAACTGGATGGCAGAAGCAGAGGTGGAAAGTGGT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000522782.6
CDS-3UTR GCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAGGTAGAAAATATAAATaGGTGCTGGCCCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLGRKYK*VLALTQ
Trigger: TTGAGTCAGGGCCAGCACGCATTTATATTTTCTACC...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACATGCAGTGCTCCTGTaGCATCTGGGACCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLHAVLL*HLGPKR
Trigger: TCTCTTGGGTCCCAGATGGCACAGGAGCACTGCATG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAAAAACAAGCATGCAGTaGTCCTGTGCCATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAKTSMQ*SCAIWD
Trigger: GTCCCAGATGGCACAGGAGCACTGCATGCTTGTTTT...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCTCCAGTGAAACCATTTaGTCGAAGTCCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPSSETI*SKSTSS
Trigger: GGAAGATGTGGACTTCGACCAAATGGTTTCACTGGA...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTTSSSE*ELAESS
Trigger: TGAACTCTCAGCAAGTTCCCACTCGGATGATGATGT...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCTCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCCAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPQVSAS*KGYKSS
Trigger: GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTG...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCGTTCTTAAAATTATATaGCACCACGCTTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIVLKII*HHASCS
Trigger: GCTACAGGAAGCGTGGTGCCATATAATTTTAAGAAC...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGAATGGCACCATAAGCTaGTACACTCAAAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKNGTIS*YTQSKP
Trigger: TGGTTTACTTTGAGTGTACCAGCTTATGGTGCCATT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWAPMTG*ALENKH
Trigger: ATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAGCACCCATGACTGGCTaGGCTCTAGAAAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLAPMTG*ALENKH
Trigger: ATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGC...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 72 bp CCAGAGGAGGTTAGCGGACTGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAATCTCTTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PEEVSGLLVKHY*SAQSSKSLSSP
Trigger: TGGGGATGAAAGAGATTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAGCAGTCCGCTAACCTCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
3UTR CAA 72 bp CCGTCCCATCTCTGGGTTAATGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSHLWVNDIDAT*SIQGRSLFNSF
Trigger: GAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTCATTAACCCAGAGATGGGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCTACTTGCCACTAAAGTaGATAAGCAACAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIYLPLK*ISNNVA
Trigger: AGCTACATTGTTGCTTATTCACTTTAGTGGCAAGTA...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTACTTGCCACTAAAGTaGATAAGCAACAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKYLPLK*ISNNVA
Trigger: AGCTACATTGTTGCTTATTCACTTTAGTGGCAAGTA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSTICFQ*NHLVEV
Trigger: GACTTCGACCAAATGGTTTCACTGGAAGCAAATCGT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMEKTLN*NASSLF
Trigger: AAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTC...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCCATAGTGACTGGCTGTaGGAAGACACTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPHSDWL*EDTQLK
Trigger: TTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATG...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATC +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLQLLSF*IVPMDI
Trigger: GATGTCCATTGGCACAATTCAAAAGGACAGCAACTG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATC +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFQLLSF*IVPMDI
Trigger: GATGTCCATTGGCACAATTCAAAAGGACAGCAACTG...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGACAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCAAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCCACGCTTCCTGTAGCTaGAGAAATTGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RSYIIRWTEMTAALRLCIHASCS*RNCSEE
Trigger: CTCTTCAGAACAATTTCTTCAGCTACAGGAAGCGTG...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGGTACTATCTGAAATCTaGGGGATGTTTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMVLSEI*GMFRGL
Trigger: CAGTCCTCTAAACATCCCTCAGATTTCAGATAGTAC...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLNPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCTTATCTCAATCCTCTaGTTCTGCCATCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLLISIL*FCHPVA
Trigger: AGCAACTGGATGGCAGAAGCAGAGGATTGAGATAAG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR GCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTCTTATCTCAATCCTCTaGTTCTGCCATCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFLISIL*FCHPVA
Trigger: AGCAACTGGATGGCAGAAGCAGAGGATTGAGATAAG...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR GCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPRLLQT*YVRTGL
Trigger: CAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCT...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMRLLQT*YVRTGL
Trigger: CAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCT...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGCAAAAGGAAAGCCGTaGACAGATATTGCTTTGACC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSAKGKP*TDIALT
Trigger: GGTCAAAGCAATATCTGTGCACGGCTTTCCTTTTGC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTAAAAACAAGCATGCAGTaGTCCTGTGCCATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVKTSMQ*SCAIWD
Trigger: GTCCCAGATGGCACAGGAGCACTGCATGCTTGTTTT...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTAGTAGGAGGCACGAATTaGAGAGGTGACGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVVGGTN*RGDETG
Trigger: ACCTGTTTCGTCACCTCTCCAATTCGTGCCTCCTAC...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCACTCCGTCCCATCTCTaGGTTAATGACATAGATGCC +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSTPSHL*VNDIDA
Trigger: GGCATCTATGTCATTAACCCAGAGATGGGACGGAGT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGAGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGCTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWLWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCCCCAAGATTCTATaGTTCTCTGCTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFIPKIL*FSASAI
Trigger: GATGGCAGAAGCAGAGAACCATAGAATCTTGGGGAT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLEKTLN*NASSLF
Trigger: AAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTC...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGEKTLN*NASSLF
Trigger: AAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTCATAGTGACTGGCTGTaGGAAGACACTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVHSDWL*EDTQLK
Trigger: TTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATG...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGCATAGTGACTGGCTGTaGGAAGACACTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGHSDWL*EDTQLK
Trigger: TTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATG...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATC +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWQLLSF*IVPMDI
Trigger: GATGTCCATTGGCACAATTCAAAAGGACAGCAACTG...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGCCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCCCCTGCCAACCTCAATaGACTAAAATGATATCTCAG +
Preference number: 4 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTPCQPQ*TKMISQ
Trigger: CTGAGATATCATTTTAGTTCATTGAGGTTGGCAGGG...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCTTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTACTATCTGAAATCTaGGGGATGTTTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSVLSEI*GMFRGL
Trigger: CAGTCCTCTAAACATCCCTCAGATTTCAGATAGTAC...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGTACTATCTGAAATCTaGGGGATGTTTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSVLSEI*GMFRGL
Trigger: CAGTCCTCTAAACATCCCTCAGATTTCAGATAGTAC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTATGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTGCTACATGCAGAGGGTaGAGAGGACTATACCAACAG +
Preference number: 4 (lower is better)
Translates to: QTVYKLKWGISSINTCLSATCRG*RGLYQQ
Trigger: CTGTTGGTATAGTCCTCTTCACCCTCTGCATGTAGC...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAAAGTCTGATCTAGGGTaGAGCTACATGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLKSDLG*SYMQRV
Trigger: CACCCTCTGCATGTAGCTTCACCCTAGATCAGACTT...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTACATTCCTGGCCTAGATaGGAAAAGAATGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVHSWPR*EKNAFS
Trigger: AGAGAATGCATTCTTTTCTCATCTAGGCCAGGAATG...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAACATTTTCGCCTCCTaGACTCCCGACCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSNIFAS*TPDPKP
Trigger: TGGCTTGGGGTCGGGAGTGCAGGAGGCGAAAATGTT...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR GCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAATCTTGCGAAGATGGCTaGTCATCATGCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKSCEDG*SSCTAV
Trigger: CACGGCTGTGCATGATGAGCAGCCATCTTCGCAAGA...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GGCCTTGTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: GLVHSESHHLNLLLVNYSREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...GGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAACAAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGINPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: KAGGSFEATSTRSAWATKTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSYIIRWTEMTAALRLCIRLLQT*YVRTGL
Trigger: CAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCT...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGATTCTATGGTTCTCTaGTTCTGCCATCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWDSMVL*FCHPVA
Trigger: AGCAACTGGATGGCAGAAGCAGAGAACCATAGAATC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLTSSSE*ELAESS
Trigger: TGAACTCTCAGCAAGTTCCCACTCGGATGATGATGT...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTACAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLQVSAS*KGYKSS
Trigger: GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTG...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTAATTCCTCATCAATaGCACCATAAGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMLIPHQ*HHKLVH
Trigger: GTGTACCAGCTTATGGTGCCATTGATGAGGAATTAA...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGTGCTCCTGTGCCATCTaGGACCCAAGAGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVCSCAI*DPRDKS
Trigger: ACTTTTGTCTCTTGGGTCCCAGATGGCACAGGAGCA...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCTACTTGCCACTAAAGTaGATAAGCAACAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPYLPLK*ISNNVA
Trigger: AGCTACATTGTTGCTTATTCACTTTAGTGGCAAGTA...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSEKTLN*NASSLF
Trigger: AAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTC...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSNRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGTTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCGGACAAAGGGAGGCATaGGTTTTATCCCGTCACGCT +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSGQREA*VLSRHA
Trigger: AGCGTGACGGGATAAAACTCATGCCTCCCTTTGTCC...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAGTACTATCTGAAATCTaGGGGATGTTTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAVLSEI*GMFRGL
Trigger: CAGTCCTCTAAACATCCCTCAGATTTCAGATAGTAC...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGCAGCGGGTAATTTATTaGTTGGTAGAGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTQRVIY*LVEKFS
Trigger: GGAAAATTTCTCTACCAAGCAATAAATTACCCGCTG...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 4 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: RSYIIRWTEMTAALRLCIGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGGACTCTTAGTTCAGTaGTTTTCCCCATCATGTTTA +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSGLLVQ*FSPSCL
Trigger: TAAACATGATGGGGAAAAGCACTGAACTAAGAGTCC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCACAAATGGAGCTCCACTaGCAAGTTCTTAAAATTATA +
Preference number: 4 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPQMELH*QVLKII
Trigger: TATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTG...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAATCTAGAAAACAAGCATaGAGTGCTCCTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKSRKQA*SAPVPS
Trigger: AGATGGCACAGGAGCACTGCATGCTTGTTTTCTAGA...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTAACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVTSSSE*ELAESS
Trigger: TGAACTCTCAGCAAGTTCCCACTCGGATGATGATGT...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTAATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACTGCTGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGAGTTCTTAAAATTATATaGCACCACGCTTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DCCLETLYQYFWFLTEGGVLKII*HHASCS
Trigger: GCTACAGGAAGCGTGGTGCCATATAATTTTAAGAAC...TCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCAGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTAATGGCACCATAAGCTaGTACACTCAAAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLNGTIS*YTQSKP
Trigger: TGGTTTACTTTGAGTGTACCAGCTTATGGTGCCATT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGAATGGCACCATAAGCTaGTACACTCAAAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGNGTIS*YTQSKP
Trigger: TGGTTTACTTTGAGTGTACCAGCTTATGGTGCCATT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTAATGGCACCATAAGCTaGTACACTCAAAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVNGTIS*YTQSKP
Trigger: TGGTTTACTTTGAGTGTACCAGCTTATGGTGCCATT...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTTAATTCCTCATCAATaGCACCATAAGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSLIPHQ*HHKLVH
Trigger: GTGTACCAGCTTATGGTGCCATTGATGAGGAATTAA...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTTTAATTCCTCATCAATaGCACCATAAGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFLIPHQ*HHKLVH
Trigger: GTGTACCAGCTTATGGTGCCATTGATGAGGAATTAA...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCATATACATACACAATTTaGAGGACAGGCAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPYTYTI*RTGSYQ
Trigger: TTGATAACTGCCTGTCCTCCAAATTGTGTATGTATA...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CCA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCTATACATACACAATTTaGAGGACAGGCAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIYTYTI*RTGSYQ
Trigger: TTGATAACTGCCTGTCCTCCAAATTGTGTATGTATA...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCGCTAGCACCCATGACTaGCTGGGCTCTAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILASTHD*LGSRKQ
Trigger: TTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGC...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTTTGGGTTCTACTTGCTaGTGTGTGGAGACTAGGCTA +
Preference number: 4 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEILGSTC*CVETRL
Trigger: TAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAA...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTTATACAATACACTTaGGTTCTACTTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLFIQYT*VLLAGV
Trigger: CACACCAGCAAGTAGAACCCAAGTGTATTGTATAAA...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATC +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFQLLSF*IVPMDI
Trigger: GATGTCCATTGGCACAATTCAAAAGGACAGCAACTG...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCACGAATTGGAGAGGTaGCGAAACAGGTATAGAGCC +
Preference number: 4 (lower is better)
Translates to: NYLILFQVSASWKGYKSSHELER*RNRYRA
Trigger: GGCTCTATACCTGTTTCGTCACCTCTCCAATTCGTG...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: RSYIIRWTEMTAALRLCINLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSRHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSRHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCATTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGCACGCTTCCTGTAGCTaGAGAAATTGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVHASCS*RNCSEE
Trigger: CTCTTCAGAACAATTTCTTCAGCTACAGGAAGCGTG...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCTCATATGAAGAAACGTaGAGCCCCAAATGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILSYEET*SPKWSS
Trigger: GGAGCTCCATTTGGGGCTTCACGTTTCTTCATATGA...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAATCAGGAGCCTCTAGCTaGAGTAATGCTTCAATAATC +
Preference number: 4 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKSGASS*SNASII
Trigger: GATTATTGAAGCATTACTTCAGCTAGAGGCTCCTGA...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCGGATGTTTAGAGGACTaGCCCCCAGACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NYLILFQVSASWKGYKSSGCLED*PPDKGF
Trigger: AAATCCCTTGTCTGGGGGTCAGTCCTCTAAACATCC...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCAGCGGGTAATTTATTaGTTGGTAGAGAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLQRVIY*LVEKFS
Trigger: GGAAAATTTCTCTACCAAGCAATAAATTACCCGCTG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCAAGAGGGACACTTCTTaGCAGTTCTTCAATATAACG +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSKRDTS*QFFNIT
Trigger: CGTTATATTGAAGAACTGGCAAGAAGTGTCCCTCTT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QTVYKLKWGISSINTCLSDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CGAGCTGATTTTGTAGGTACTGGGTTACAGCATTGTAGGTTACAGCTGACAGTTCTGACAGTTTTCATATaGCCCATCTTTGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: RADFVGTGLQHCRLQLTVLTVFI*PIFVVT
Trigger: TGTAACTACAAAGATGGGGCATATGAAAACTGTCAG...AACTGTCAGCTGTAACCTACAATGCTGTAACCCAGTACCTACAAAATCAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAAGAGAGGAAAAATGCTaGCTTCTAATGAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSREEKC*LLMKTL
Trigger: CAAAGTCTTCATTAGAAGGCAGCATTTTTCCTCTCT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMNPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTCCTGCAGTGTGGGGATaGATTCCAATGACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFPAVWG*IPMTRG
Trigger: TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGG...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTAACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLTSSSE*ELAESS
Trigger: TGAACTCTCAGCAAGTTCCCACTCGGATGATGATGT...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTATCCTATATCATCAGGTaGACTGAAATGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLSYIIR*TEMTAA
Trigger: GGCAGCAGTCATTTCAGTCCACCTGATGATATAGGA...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCGTTCTTAAAATTATATaGCACCACGCTTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSVLKII*HHASCS
Trigger: GCTACAGGAAGCGTGGTGCCATATAATTTTAAGAAC...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGCTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMLWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTACAGCCTCACTTGTCTaGAGGAGCAAAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLATASLV*RSKRKA
Trigger: GGCTTTCCTTTTGCTCCTCCAGACAAGTGAGGCTGT...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTTGCTCCTGTGCCATCTaGGACCCAAGAGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLACSCAI*DPRDKS
Trigger: ACTTTTGTCTCTTGGGTCCCAGATGGCACAGGAGCA...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKTICFQ*NHLVEV
Trigger: GACTTCGACCAAATGGTTTCACTGGAAGCAAATCGT...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTAAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TGGTTCTGGATTATTTTAGTGGCACATAAATTAGTAAGCACTCTGGATTTTGTCTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: WFWIILVAHKLVSTLDFVYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...GACAAAATCCAGAGTGCTTACTAATTTATGTGCCACTAAAATAATCCAGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR TCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCTATCATCAGGTGGACTaGAATGACTGCTGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSYHQVD*NDCCLE
Trigger: CTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATA...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTAACAGGTTCCTTTTCTaGGAGCGAGCTGATTTTGTA +
Preference number: 4 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEINRFLF*ERADFV
Trigger: TACAAAATCAGCTCGCTCTCAGAAAAGGAACCTGTT...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTGGTTTTCTCCTAGGATaGGATCCCAAATATAGAACC +
Preference number: 4 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIGFLLG*DPKYRT
Trigger: GGTTCTATATTTGGGATCTCATCCTAGGAGAAAACC...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCCACGCTTCCTGTAGCTaGAGAAATTGTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILHASCS*RNCSEE
Trigger: CTCTTCAGAACAATTTCTTCAGCTACAGGAAGCGTG...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCTCAGGAGCCTCTAGCTaGAGTAATGCTTCAATAATC +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFSGASS*SNASII
Trigger: GATTATTGAAGCATTACTTCAGCTAGAGGCTCCTGA...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTAACCCTACAGACATGTaGTACATTGAAAAGATTCAA +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLNPTDM*YIEKIQ
Trigger: TTGAATCTTTTCAATGTAGCACATGTCTGTAGGGTT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCGGTAGAAAATATAAATaGGTGCTGGCCCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFGRKYK*VLALTQ
Trigger: TTGAGTCAGGGCCAGCACGCATTTATATTTTCTACC...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCATCAGATCCAACCAATaGAAGAACTGTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFIRSNQ*KNCDQK
Trigger: CTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGAT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAACAGGTTAGTGCTTCTTaGAAAGGCTACAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKQVSAS*KGYKSS
Trigger: GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTG...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCTTTATACAATACACTTaGGTTCTACTTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSFIQYT*VLLAGV
Trigger: CACACCAGCAAGTAGAACCCAAGTGTATTGTATAAA...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
3UTR CAA 72 bp TCTTACTGGTACTCAGGAAATATTTATACAATACACTaGGGTTCTACTTGCTGGTGTGTGGAGACTAGGCTA +
Preference number: 4 (lower is better)
Translates to: SYWYSGNIYTIH*GSTCWCVETRL
Trigger: TAGCCTAGTCTCCACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTGAGCAGTTAGCTCTCTaGCATCTGTATAACCCTACA +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFEQLAL*HLYNPT
Trigger: TGTAGGGTTATACAGATGTCAGAGAGCTAACTGCTC...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATTTATTATATACAGTTaGAGCAGGTGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVFIIYS*SRWHHP
Trigger: TGGATGATGCCACCTGCTTCAACTGTATATAATAAA...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 4 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTGATGGGGATACGTTTTaGAATCTCAAAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFDGDTF*NLKGLL
Trigger: CAGAAGGCCTTTGAGATTGCAAAACGTATCCCCATC...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCGACAGAAACCTGAACTaGTATTTCCTGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSDRNLN*YFLALF
Trigger: GAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTC...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTACTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GTISWYTQSKPVTLATKLLWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGTATACATACACAATTTaGAGGACAGGCAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWYTYTI*RTGSYQ
Trigger: TTGATAACTGCCTGTCCTCCAAATTGTGTATGTATA...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAAATACTTTTGGTTTCTaGCTGAAGGTGGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKNTFGF*LKVDRN
Trigger: GTTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATT...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTATTGTAGGTTACAGCTaGCAGTTTTCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFIVGYS*QFSYAP
Trigger: TGGGGCATATGAAAACTGTCAGCTGTAACCTACAAT...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCAGACATGTGCTACATTaGAAAGATTCAATCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFRHVLH*KDSILH
Trigger: GTGCAAGATTGAATCTTTTCAATGTAGCACATGTCT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCATGTTAGGACAGGGTTaGAAGTACTATCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFMLGQG*KYYLKS
Trigger: AGATTTCAGATAGTACTTTCAACCCTGTCCTAACAT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTTGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 4 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTCATTCCTGGCCTAGATaGGAAAAGAATGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFHSWPR*EKNAFS
Trigger: AGAGAATGCATTCTTTTCTCATCTAGGCCAGGAATG...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCAGATTACTGCAAACCTaGTATGTTAGGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NYLILFQVSASWKGYKSSRLLQT*YVRTGL
Trigger: CAACCCTGTCCTAACATAGCAGGTTTGCAGTAATCT...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCGGTAGAAAATATAAATaGGTGCTGGCCCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSGRKYK*VLALTQ
Trigger: TTGAGTCAGGGCCAGCACGCATTTATATTTTCTACC...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGGGACCAATTTACTCATaGAAAGTAGTTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVGPIYS*KVVYRA
Trigger: TGCTCTGTAAACTACTTTCCATGAGTAAATTGGTCC...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTATTTATACAATACACTTaGGTTCTACTTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLFIQYT*VLLAGV
Trigger: CACACCAGCAAGTAGAACCCAAGTGTATTGTATAAA...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR TCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAATACTTGCCACTAAAGTaGATAAGCAACAATGTAGCT +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKYLPLK*ISNNVA
Trigger: AGCTACATTGTTGCTTATTCACTTTAGTGGCAAGTA...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCCAAAAGCTACATTGGTaGTGTTTAGGAAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RVLNNNVSYENMWGKTILQKLHW*CLGSYQ
Trigger: CTGATAACTTCCTAAACATCACCAATGTAGCTTTTG...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAAACCTCTGTGCATTATaGCATTGGTGTGGAAATTTA +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKNLCAL*HWCGNL
Trigger: TAAATTTCCACACCAATGTCATAATGCACAGAGGTT...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTCAAATGGAGCTCCACTaGCAAGTTCTTAAAATTATA +
Preference number: 4 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEIQMELH*QVLKII
Trigger: TATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTG...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAAGACTTTCAAAAGAATaGCAAACATTTTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKRLSKE*QTFSPP
Trigger: AGGAGGCGAAAATGTTTGCCATTCTTTTGAAAGTCT...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR CCA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTGTTCTTAAAATTATATaGCACCACGCTTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSKATLVMFRKLSETNHFVLKII*HHASCS
Trigger: GCTACAGGAAGCGTGGTGCCATATAATTTTAAGAAC...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CCA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTACTTTGGCTAAATGATTaGTTAGCTTTTATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLLWLND*LAFIWL
Trigger: GAGCCAAATAAAAGCTAACCAATCATTTAGCCAAAG...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR TCA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTTGGTTTTCTTCCTCTTaGAAACTAGCTTTACGAAGT +
Preference number: 4 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAWFSSS*KLALRS
Trigger: ACTTCGTAAAGCTAGTTTTCAAGAGGAAGAAAACCA...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR GCA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCGTTACAGTTAGATTCTaGAGATCCTATATCATCAGG +
Preference number: 4 (lower is better)
Translates to: NYLILFQVSASWKGYKSSVTVRF*RSYIIR
Trigger: CCTGATGATATAGGATCTGCAGAATCTAACTGTAAC...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
3UTR CAA 72 bp GCAAGAAATGTCATCATAAGTGTTTATTATATACAGTaGAAGCAGGTGGCATCATCCATCATTTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ARNVIISVYYIQ*KQVASSIIFLP
Trigger: AGGAAGAAAAATGATGGATGATGCCACCTGCTTCAACTGTATATAATAAACACTTATGATGACATTTCTTGC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR GCA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCACCTTAGAAATAAACTaGTCACTTTGGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: HNYLILFQVSASWKGYKSTLEIN*SLWKIS
Trigger: ACTGATCTTCCAAAGTGAGCAGTTTATTTCTAAGGT...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 90 bp TTTGCACTCATCTGGGGCCACTTGGGGCTCAGTGCTGCCCTTGGCTaGAGGACCAGTTCTTCCTTCTGTGTTGGTCTCACTGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FALIWGHLGLSAALG*RTSSSFCVGLTGSC
Trigger: GCAGCTCCCAGTGAGACCAACACAGAAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS GCA 90 bp GCCCTGGTAGTCCTTTGCACTCATCTGGGGCCACTTGGGGCTCAGTaGTGCCCTTGGCTGAAGGACCAGTTCTTCCTGGAGATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: ALVVLCTHLGPLGAQ*CPWLKDQFFLEMQN
Trigger: ATTCTGCATCTCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGACTACCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521527.5
CDS CCA 90 bp TCGCTGATCAAAACTGGTAGTCCTTTGCACTCATCTGGGGCCACTTaGGGCTCAGTGCTGCCCTTGGCTGAAGGACCAGTTCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SLIKTGSPLHSSGAT*GSVLPLAEGPVLPG
Trigger: TCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGACTACCAGTTTTGATCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS CCA 90 bp TTTAAATGGAGCCCTGGTAGTCCTTTGCACTCATCTGGGGCCACTTaGGGCTCAGTGCTGCCCTTGGCTGAAGGACCAGTTCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FKWSPGSPLHSSGAT*GSVLPLAEGPVLPG
Trigger: TCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGACTACCAGGGCTCCATTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521527.5
CDS GCA 90 bp AAACTGGTAGTCCTTTGCACTCATCTGGGGCCACTTGGGGCTCAGTaGTGCCCTTGGCTGAAGGACCAGTTCTTCCTGGAGATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: KLVVLCTHLGPLGAQ*CPWLKDQFFLEMQN
Trigger: ATTCTGCATCTCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGACTACCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS GCA 90 bp CCACCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTGGAGCTGTTaGTATTCAGCCATCTTGCCAGATCCCCAGGTGAATGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: PPSVLVSLGAADWSC*YSAILPDPQVNVLE
Trigger: CTCAAGCACATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS CCA 90 bp TCGCTGATCAAAACTGGTAGTCCTTTGCACTCATCTGGGGCCACTTaGGGCTCAGTGCTGCCCTTGGCTGAAGGACCAGTTCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SLIKTGSPLHSSGAT*GSVLPLAEGPVLPS
Trigger: AGAAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGACTACCAGTTTTGATCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS GCA 90 bp CTGAGACACGTGAGCCCAGATCTTGCTGTTCTCTCTGGAGGCCTCTaGCAACTACAGGAATGCAGACTGGAATTGGTTCAGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: LRHVSPDLAVLSGGL*QLQECRLELVQTPQ
Trigger: CTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAAGATCTGGGCTCACGTGTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS GCA 90 bp CTTCCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTGGAGCTGTTaGTATTCAGCCATCTTGCCAGATCCCCAGGTGAATGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LPSVLVSLGAADWSC*YSAILPDPQVNVLE
Trigger: CTCAAGCACATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS CCA 90 bp AGGAATGCAGACTGGAATTGGTTCAGACACCTCAGGAACTCTTCCTaGAGCCAGTCCATCTGCTGGCTCCTCTGTCCCAGAATCACCTCT +
Preference number: 5 (lower is better)
Translates to: RNADWNWFRHLRNSS*SQSICWLLCPRITS
Trigger: AGAGGTGATTCTGGGACAGAGGAGCCAGCAGATGGACTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 90 bp TTCTCTCTGGAGGCCTCTGCCAACTACAGGAATGCAGACTGGAATTaGTTCAGACACCTCAGGAACTCTTCCTGGAGCCAGTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: FSLEASANYRNADWN*FRHLRNSSWSQSIC
Trigger: GCAGATGGACTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 90 bp TTGCTGTTCTCTCTGGAGGCCTCTGCCAACTACAGGAATGCAGACTaGAATTGGTTCAGACACCTCAGGAACTCTTCCTGGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LLFSLEASANYRNAD*NWFRHLRNSSWSQS
Trigger: GGACTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 90 bp GGACCAGTTCTTCCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCCCAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: GPVLPSVLVSLGAAD*SCCYSAILPDPQVN
Trigger: ATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGAAGAACTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS GCA 90 bp CCAGATCTTGCTGTTCTCTCTGGAGGCCTCTGCCAACTACAGGAATaGAGACTGGAATTGGTTCAGACACCTCAGGAACTCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PDLAVLSGGLCQLQE*RLELVQTPQELFLE
Trigger: CTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAAGATCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 90 bp AAACAGGGGACTGAGACACGTGAGCCCAGATCTTGCTGTTCTCTCTaGAGGCCTCTGCCAACTACAGGAATGCAGACTGGAATTGGTTCA +
Preference number: 5 (lower is better)
Translates to: KQGTETREPRSCCSL*RPLPTTGMQTGIGS
Trigger: TGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAAGATCTGGGCTCACGTGTCTCAGTCCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 90 bp AGAAATCACCCACCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCCCAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: RNHPPSVLVSLGAAD*SCCYSAILPDPQVN
Trigger: ATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGTGGGTGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS CCA 90 bp CTGGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTGTGTTaGTCTCACTGGGAGCTGCAGACTGGAGCTGTTGCTATTCAGCCA +
Preference number: 5 (lower is better)
Translates to: LGTSVGNAEITHLLC*SHWELQTGAVAIQP
Trigger: TGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS-3UTR CAA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 5 (lower is better)
Translates to: KAGGSFEATSTRSAWATKASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS GCA 90 bp AAAACTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTGGAGCTGTTaGTATTCAGCCATCTTGCCAGATCCCCAGGTGAATGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: KTSVLVSLGAADWSC*YSAILPDPQVNVLE
Trigger: CTCAAGCACATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS GCA 90 bp TTAAGTGGCAAAGATGGTGTAGACCTTGGGCCTAAACAAGTCCCATaGCTAGGAGGAGGCAGGAGTGTCAGGATCACAGAACAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LSGKDGVDLGPKQVP*LGGGRSVRITEQQS
Trigger: GCTCTGTTGTTCTGTGATCCTGACACTCCTGCCTCCTCCTAGGCATGGGACTTGTTTAGGCCCAAGGTCTACACCATCTTTGCCACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS CCA 90 bp TCGCTGATCAAAACTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCCCAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: SLIKTSVLVSLGAAD*SCCYSAILPDPQVN
Trigger: ATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGTTTTGATCAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS-3UTR CAA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCAGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTGGAGACTAGGCTAGCACCCATGACTGGCTGGGCTCTAGAAAACAAGCATGCATGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: VETRLAPMTGWALENKHACYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...TGCATGCTTGTTTTCTAGAGCCCAGCCAGTCATGGGTGCTAGCCTAGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGIQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGCAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: KAGGSFEATSTRSAWATKQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS CCA 90 bp CTGGAGATGCAGAATCATTTGTATGCTGTCCAAGGTGCTGATAAGTaGTACTCTTATGGAAATCGCCAGGGGAGCAGCTTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LEMQNHLYAVQGADK*YSYGNRQGSSLAQL
Trigger: GAGCTGAGCCAAGCTGCTCCCCTGGCGATTTCCATAAGAGTACCACTTATCAGCACCTTGGACAGCATACAAATGATTCTGCATCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518497.6
ENST00000519325.1
ENST00000519612.5
ENST00000520327.6
ENST00000521527.5
ENST00000522440.5
CDS CCA 90 bp GAAGCTCCTGGGCACTCTGAGTCTTTTCTTGTCAGCATGTCTTCTTaGAAGGCCATATTCATCTTGGCTCTCTCTCAGACCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: EAPGHSESFLVSMSS*KAIFILALSQTLES
Trigger: GGATTCCAGGGTCTGAGAGAGAGCCAAGATGAATATGGCCTTCCAAGAAGACATGCTGACAAGAAAAGACTCAGAGTGCCCAGGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520327.6
ENST00000521527.5
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS GCA 90 bp TTTTGTCCCAGTGAGCAGGTTGAATTAATTAGTAACTCATGTTCCTaGATGGTGGCTCTCTGGCGGGCTTCAAAGGGAGGCAGTGTCACT +
Preference number: 5 (lower is better)
Translates to: FCPSEQVELISNSCS*MVALWRASKGGSVT
Trigger: AGTGACACTGCCTCCCTTTGAAGCCCGCCAGAGAGCCACCATGCAGGAACATGAGTTACTAATTAATTCAACCTGCTCACTGGGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS-3UTR CAA 90 bp AGACGCATGCAACCTATAGCACCATACCTAAGACCACAAAGGGCAGGAGGGTTGCTGAGAGTTCAAAGCTaGAGGGAAAGGATGCATTGT +
Preference number: 5 (lower is better)
Translates to: RRMQPIAPYLRPQRAGGLLRVQS*RERMHC
Trigger: ACAATGCATCCTTTCCCTCAAGCTTTGAACTCTCAG...CAACCCTCCTGCCCTTTGTGGTCTTAGGTATGGTGCTATAGGTTGCATGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGACGCTAGTTCCCTCTTaGGCTATGATGACATCATCA +
Preference number: 5 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWTLVPS*AMMTSS
Trigger: TGATGATGTCATCATAGCCAAAGAGGGAACTAGCGT...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGAGTAAACCAGTTACTTaGGCCACCAAATTAGGCCAC +
Preference number: 5 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWSKPVT*ATKLGH
Trigger: GTGGCCTAATTTGGTGGCCAAAGTAACTGGTTTACT...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 90 bp CAACCACTTTCCACCTCTGCTTCTGCCATCCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATCTTCATAGTGACTGGCTGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: QPLSTSASAIQLLSF*IVPMDIFIVTGCEK
Trigger: CTTCTCACAGCCAGTCACTATGAAGATGTCCATTGGCACAATTCAAAAGGACAGCAACTGGATGGCAGAAGCAGAGGTGGAAAGTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322602.9
ENST00000522177.1
ENST00000522782.6
CDS TCA 90 bp TTAGTCTCTTCCTTCCCAGGAGTAGGATTTCCTCAGTGGGACATCTaGAATATGGCTCCATCAGTCACACGCAGTAAAAGGCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LVSSFPGVGFPQWDI*NMAPSVTRSKRPES
Trigger: TGACTCTGGCCTTTTACTGCGTGTGACTGATGGAGCCATATTTCAGATGTCCCACTGAGGAAATCCTACTCCTGGGAAGGAAGAGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS-3UTR CAA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGCATCCGAGTGGGAACTaGCTGAGAGTTCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTHPSGN*LRVQSL
Trigger: CAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATG...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGACGCTAGTTCCCTCTTaGGCTATGATGACATCATCA +
Preference number: 5 (lower is better)
Translates to: KAGGSFEATSTRSAWATKTLVPS*AMMTSS
Trigger: TGATGATGTCATCATAGCCAAAGAGGGAACTAGCGT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCATTATCCCGTCACGCTTaGAATTTCCTGTCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPLSRHA*NFLSSP
Trigger: AGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAA...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTAAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGT +
Preference number: 5 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLRQEDH*KPQVQG
Trigger: ACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCT...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGTGTAATCTCAACACTTaGGGAGGTAAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLCNLNT*GGKAGG
Trigger: TCCTCCTGCCTTACCTCCCAAAGTGTTGAGATTACA...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS CCA 90 bp ATCAGGGTAGTGGTAGCTGAAGGTTGGGGTGGCTGTGACAATTTCTaGAGATGCAGAATCATTTGTATGCTGTCCAAGGTGCTGATAAGT +
Preference number: 5 (lower is better)
Translates to: IRVVVAEGWGGCDNF*RCRIICMLSKVLIS
Trigger: ACTTATCAGCACCTTGGACAGCATACAAATGATTCTGCATCTCCAGAAATTGTCACAGCCACCCCAACCTTCAGCTACCACTACCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518497.6
ENST00000519612.5
ENST00000522440.5
CDS-3UTR CAA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTACTGAGAGTTCAAAGCTaGAGGGAAAGGATGCATTGT +
Preference number: 5 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLLRVQS*RERMHC
Trigger: ACAATGCATCCTTTCCCTCAAGCTTTGAACTCTCAG...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCACATCCGAGTGGGAACTaGCTGAGAGTTCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSHPSGN*LRVQSL
Trigger: CAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATG...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp CAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: QWKNCDQKRNHGTLSSVLDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...AAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGTGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCCAAAGGGCAGGAGGGTaGACAGAGGTCTTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSQRAGG*TEVLRG
Trigger: TCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTG...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTATCCCGTCACGCTTaGAATTTCCTGTCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLLSRHA*NFLSSP
Trigger: AGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAA...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCACATCCGAGTGGGAACTaGCTGAGAGTTCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAHPSGN*LRVQSL
Trigger: CAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATG...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp TGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGACGCTAGTTCCCTCTTaGGCTATGATGACATCATCA +
Preference number: 5 (lower is better)
Translates to: CDQKRNHGTLSSVLFPIMTLVPS*AMMTSS
Trigger: TGATGATGTCATCATAGCCAAAGAGGGAACTAGCGT...CATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCATTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCATGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGCTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 5 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWLCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TTGGGAGGTAAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LGGKAGGSFEATSTRSAWSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...CCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTTACCTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGT +
Preference number: 5 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVRQEDH*KPQVQG
Trigger: ACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCT...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGT +
Preference number: 5 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSRQEDH*KPQVQG
Trigger: ACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCT...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCAGTAAACCAGTTACTTaGGCCACCAAATTAGGCCAC +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLSKPVT*ATKLGH
Trigger: GTGGCCTAATTTGGTGGCCAAAGTAACTGGTTTACT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 90 bp CCAATGGACATCTTCATAGTGACTGGCTGTGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTTGGCTATGATGACATCATCATCCGA +
Preference number: 5 (lower is better)
Translates to: PMDIFIVTGCEKTLN*NASSLFGYDDIIIR
Trigger: TCGGATGATGATGTCATCATAGCCAAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATGAAGATGTCCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 90 bp AACTTATCTCAATCCTCTGCTTCTGCCATCCAGTTGCTGTCCTTTTaGATTGTGCCAATGGACATCTTCATAGTGACTGGCTGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NLSQSSASAIQLLSF*IVPMDIFIVTGCEK
Trigger: CTTCTCACAGCCAGTCACTATGAAGATGTCCATTGGCACAATTCAAAAGGACAGCAACTGGATGGCAGAAGCAGAGGATTGAGATAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR CAA 90 bp CCATACCTAAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCACAGCGGGTAATTTATaGCTTGGTAGAGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: PYLRPQRAGGLTEVLRGITAGNL*LGREIF
Trigger: GAAAATTTCTCTACCAAGCAATAAATTACCCGCTGT...GATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTTAGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGTGTAAGAACTACGATTaGCTTCCAGTGAAACCATTT +
Preference number: 5 (lower is better)
Translates to: KAGGSFEATSTRSAWATKCKNYD*LPVKPF
Trigger: AAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACA...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGCTGAGAGTTCAAAGCTaGAGGGAAAGGATGCATTGT +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGLRVQS*RERMHC
Trigger: ACAATGCATCCTTTCCCTCAAGCTTTGAACTCTCAG...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAACGCTAGTTCCCTCTTaGGCTATGATGACATCATCA +
Preference number: 5 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVTLVPS*AMMTSS
Trigger: TGATGATGTCATCATAGCCAAAGAGGGAACTAGCGT...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGTGCTGTCCTTTTGAATaGTGCCAATGGACATCTTCA +
Preference number: 5 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTCCPFE*CQWTSS
Trigger: TGAAGATGTCCATTGGCACAATTCAAAAGGACAGCA...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTATGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GTISWYTQSKPVTLATKLCYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGGCAGGAGGATCATTTGAAGCCACAAGTACAAGGTCAGCCTGGGCAACAAAGAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: KAGGSFEATSTRSAWATKNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...CTTTGTTGCCCAGGCTGACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCGTTTATTATATACAGTaGAAGCAGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: VDRNLNCYFLALFIQRAIVYYIQ*KQVASS
Trigger: GGATGATGCCACCTGCTTCAACTGTATATAATAAAC...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCTTATCCCGTCACGCTTaGAATTTCCTGTCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSLSRHA*NFLSSP
Trigger: AGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAA...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGCACCATAAGCTGGTACACTCAAAGTAAACCAGTTACTTTGGCCACCAAATTATGTAATCTCAACACTTaGGGAGGTAAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GTISWYTQSKPVTLATKLCNLNT*GGKAGG
Trigger: TCCTCCTGCCTTACCTCCCAAAGTGTTGAGATTACA...TAATTTGGTGGCCAAAGTAACTGGTTTACTTTGAGTGTACCAGCTTATGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GAAACCAACCACTTTCCACCTGCAGTGTGGGGATGCATTCCAATGACTAGAGGAATTTATACAATACACTaGGGTTCTACTTGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ETNHFPPAVWGCIPMTRGIYTIH*GSTCWC
Trigger: ACACCAGCAAGTAGAACCCAAGTGTATTGTATAAAT...TCCTCTAGTCATTGGAATGCATCCCCACACTGCAGGTGGAAAGTGGTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS GCA 90 bp GTTTTGCATCCACGAATTCAACCAGTCGCTGATCAAAACTGGAGATaGAGAATCATTTGTATGCTGTCCAAGGTGCTGATAAGTGGTACT +
Preference number: 5 (lower is better)
Translates to: VLHPRIQPVADQNWR*RIICMLSKVLISGT
Trigger: AGTACCACTTATCAGCACCTTGGACAGCATACAAATGATTCTGCATCTCCAGTTTTGATCAGCGACTGGTTGAATTCGTGGATGCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS-3UTR CAA 90 bp CAAACAGTCTATAAACTCAAGTGGGGCATCAGCTCAATTAATACCTGTCTATCTCATCCGAGTGGGAACTaGCTGAGAGTTCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: QTVYKLKWGISSINTCLSHPSGN*LRVQSL
Trigger: CAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATG...AGATAGACAGGTATTAATTGAGCTGATGCCCCACTTGAGTTTATAGACTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCGCGAGCTCCAGAGTTTaGGCTGAGGTAATGATGGGG +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSASSRV*AEVMMG
Trigger: CCCCATCATTACCTCAGCCAAAACTCTGGAGCTCGC...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTGGACAGAAACCTGAACTGCTATTTCCTGGCCTTGTTCATTCAGAGAGCCATCCTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 5 (lower is better)
Translates to: VDRNLNCYFLALFIQRAILCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTTTCTGTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGACCACAAAGGGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: KTTKGRRVDRGLKRNPVLLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...CAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCCCTTTGTGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATTATCCCGTCACGCTTaGAATTTCCTGTCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVLSRHA*NFLSSP
Trigger: AGGGGAAGACAGGAAATTCAAAGCGTGACGGGATAA...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGCAGGAGGGTTGACAGAGGTCTTAAGAGGAATCCAGTTTTGGGTTTTCTCCTATATGTTAGGACAGGGTaGAAAGTACTATCTGAAATC +
Preference number: 5 (lower is better)
Translates to: GRRVDRGLKRNPVLGFLLYVRTG*KVLSEI
Trigger: GATTTCAGATAGTACTTTCAACCCTGTCCTAACATA...TAGGAGAAAACCCAAAACTGGATTCCTCTTAAGACCTCTGTCAACCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGAGTAAACCAGTTACTTaGGCCACCAAATTAGGCCAC +
Preference number: 5 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWSKPVT*ATKLGH
Trigger: GTGGCCTAATTTGGTGGCCAAAGTAACTGGTTTACT...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTTCATTCAGAGAGCCATCATCTGAATCTCCTCCTGGTGAATTACTCCGTCCCAATTTATACAATACACTaGGGTTCTACTTGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: VHSESHHLNLLLVNYSVPIYTIH*GSTCWC
Trigger: ACACCAGCAAGTAGAACCCAAGTGTATTGTATAAAT...TGGGACGGAGTAATTCACCAGGAGGAGATTCAGATGATGGCTCTCTGAATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CAA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTACTGAGAGTTCAAAGCTaGAGGGAAAGGATGCATTGT +
Preference number: 5 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVLRVQS*RERMHC
Trigger: ACAATGCATCCTTTCCCTCAAGCTTTGAACTCTCAG...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAAACGTGAAGCCCCAAATGGAGCTCCACTGCCAAGTTCTTAAAATTATATGGTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: RNVKPQMELHCQVLKIIWLNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...CCATATAATTTTAAGAACTTGGCAGTGGAGCTCCATTTGGGGCTTCACGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCGACATAGATGCCACCTaGAGCATTCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RVLNNNVSYENMWGKTILDIDAT*SIQGRS
Trigger: AGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTTGCTATTTCCTGGCCTaGTTCATTCAGAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEICYFLA*FIQRAI
Trigger: GATGGCTCTCTGAATGAACAAGGCCAGGAAATAGCA...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000439768.2
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATCAGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: VSDPTNGRTVTRRETMGLQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...GAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp CCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAATGTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: PDKTSSEHFPQEPLAEVMSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...CATTACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: KNCDQKRNHGTLSSVLFPLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...GGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GTATTACTTCTGATAAGCCTGGACAAAGGGAGGCATGAGTTTTATCCCGTCACGTATGTTAGGACAGGGTaGAAAGTACTATCTGAAATC +
Preference number: 5 (lower is better)
Translates to: VLLLISLDKGRHEFYPVTYVRTG*KVLSEI
Trigger: GATTTCAGATAGTACTTTCAACCCTGTCCTAACATA...CGTGACGGGATAAAACTCATGCCTCCCTTTGTCCAGGCTTATCAGAAGTAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGATCCCGTTTGTTGACTaGTTTATAATCTGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGIPFVD*FIICFS
Trigger: CGAAAAGCAGATTATAAACAAGTCAACAAACGGGAT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322602.9
ENST00000679729.1
CDS-3UTR CAA 90 bp AGATCCTATATCATCAGGTGGACTGAAATGACTGCTGCCTTGAGACTCTGTATCACAGCGGGTAATTTATaGCTTGGTAGAGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: RSYIIRWTEMTAALRLCITAGNL*LGREIF
Trigger: GAAAATTTCTCTACCAAGCAATAAATTACCCGCTGT...GATACAGAGTCTCAAGGCAGCAGTCATTTCAGTCCACCTGATGATATAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GACATAGATGCCACCTTGAGCATTCAAGGCAGGTCTCTCTTTAATTCTTTCACCTGTAAGAACTACGATTaGCTTCCAGTGAAACCATTT +
Preference number: 5 (lower is better)
Translates to: DIDATLSIQGRSLFNSFTCKNYD*LPVKPF
Trigger: AAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACA...GGTGAAAGAATTAAAGAGAGACCTGCCTTGAATGCTCAAGGTGGCATCTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTCATCCGAGTGGGAACTaGCTGAGAGTTCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAHPSGN*LRVQSL
Trigger: CAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATG...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAAGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTAAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTCTGTGCATTATGACATaGGTGTGGAAATTTAGATCT +
Preference number: 5 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFLCIMT*VWKFRS
Trigger: AGATCTAAATTTCCACACCAATGTCATAATGCACAG...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATCCTGATAAAACCTCCTCTGAACATTTCCCTCAGGAGCCTCTAGCTGAAGTACAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: NPDKTSSEHFPQEPLAEVQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...TACTTCAGCTAGAGGCTCCTGAGGGAAATGTTCAGAGGAGGTTTTATCAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AGATCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: RSNQWKNCDQKRNHGTLSSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...ACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GACCAGAAGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTTCATTTTTCTTCCTCTaGATGTCTAGATCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: DQKRNHGTLSSVLFPIMFSFFFL*MSRSVV
Trigger: CACAACTGATCTAGACATCAAGAGGAAGAAAAATGA...AAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCTTCTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAGTTTATTATATACAGTaGAAGCAGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAVYYIQ*KQVASS
Trigger: GGATGATGCCACCTGCTTCAACTGTATATAATAAAC...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCAGTAAACCAGTTACTTaGGCCACCAAATTAGGCCAC +
Preference number: 5 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFSKPVT*ATKLGH
Trigger: GTGGCCTAATTTGGTGGCCAAAGTAACTGGTTTACT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCCAACCAATGGAAGAACTGTGACCAGAAGAGAAACCATGGGACTCTTAGTTCAATATACATACACAATTaGGAGGACAGGCAGTTATCA +
Preference number: 5 (lower is better)
Translates to: SNQWKNCDQKRNHGTLSSIYIHN*EDRQLS
Trigger: TGATAACTGCCTGTCCTCCAAATTGTGTATGTATAT...TGAACTAAGAGTCCCATGGTTTCTCTTCTGGTCACAGTTCTTCCATTGGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp AGAGAAACCATGGGACTCTTAGTTCAGTGCTTTTCCCCATCATGTTTATCTGGGATTTATACAATACACTaGGGTTCTACTTGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RETMGLLVQCFSPSCLSGIYTIH*GSTCWC
Trigger: ACACCAGCAAGTAGAACCCAAGTGTATTGTATAAAT...CCCAGATAAACATGATGGGGAAAAGCACTGAACTAAGAGTCCCATGGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp AGGGTTCTAAATAATAATGTCTCCTATGAGAACATGTGGGGTAAAACCATTCTCACGCTAGTTCCCTCTTaGGCTATGATGACATCATCA +
Preference number: 5 (lower is better)
Translates to: RVLNNNVSYENMWGKTILTLVPS*AMMTSS
Trigger: TGATGATGTCATCATAGCCAAAGAGGGAACTAGCGT...GAGAATGGTTTTACCCCACATGTTCTCATAGGAGACATTATTATTTAGAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTATGCTGTCCTTTTGAATaGTGCCAATGGACATCTTCA +
Preference number: 5 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLCCPFE*CQWTSS
Trigger: TGAAGATGTCCATTGGCACAATTCAAAAGGACAGCA...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGTGCTGTCCTTTTGAATaGTGCCAATGGACATCTTCA +
Preference number: 5 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVCCPFE*CQWTSS
Trigger: TGAAGATGTCCATTGGCACAATTCAAAAGGACAGCA...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp ACTGCCAAGTTCTTAAAATTATATGGCACCACGCTTCCTGTAGCTGAAGAAATTTTAAATTGTGTGACTTaGGCGAGCTCCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: TAKFLKLYGTTLPVAEEILNCVT*ASSRVL
Trigger: CAAAACTCTGGAGCTCGCCAAAGTCACACAATTTAA...AATTTCTTCAGCTACAGGAAGCGTGGTGCCATATAATTTTAAGAACTTGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TGGTTCTGGATTATTTTAGTGGCACATAAATTAGTAAGCACTCTGGATTTTGTCAGGCAGGAGGATCATTaGAAGCCACAAGTACAAGGT +
Preference number: 5 (lower is better)
Translates to: WFWIILVAHKLVSTLDFVRQEDH*KPQVQG
Trigger: ACCTTGTACTTGTGGCTTCAAATGATCCTCCTGCCT...GACAAAATCCAGAGTGCTTACTAATTTATGTGCCACTAAAATAATCCAGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR CAA 90 bp TGGTTCTGGATTATTTTAGTGGCACATAAATTAGTAAGCACTCTGGATTTTGTCTGTAATCTCAACACTTaGGGAGGTAAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: WFWIILVAHKLVSTLDFVCNLNT*GGKAGG
Trigger: TCCTCCTGCCTTACCTCCCAAAGTGTTGAGATTACA...GACAAAATCCAGAGTGCTTACTAATTTATGTGCCACTAAAATAATCCAGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000679729.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTGTAATCTCAACACTTaGGGAGGTAAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSCNLNT*GGKAGG
Trigger: TCCTCCTGCCTTACCTCCCAAAGTGTTGAGATTACA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCTATGTTAGGACAGGGTaGAAAGTACTATCTGAAATC +
Preference number: 5 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSYVRTG*KVLSEI
Trigger: GATTTCAGATAGTACTTTCAACCCTGTCCTAACATA...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TATGATACACCCCCACCAAGGACCAATTTACTCATGGAAAGTAGTTTACAGAGCATATACATACACAATTaGGAGGACAGGCAGTTATCA +
Preference number: 5 (lower is better)
Translates to: YDTPPPRTNLLMESSLQSIYIHN*EDRQLS
Trigger: TGATAACTGCCTGTCCTCCAAATTGTGTATGTATAT...GCTCTGTAAACTACTTTCCATGAGTAAATTGGTCCTTGGTGGGGGTGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp ACACAATTTGGAGGACAGGCAGTTATCAAACAGTCTATAAACTCAAGTGGGGCAATATACATACACAATTaGGAGGACAGGCAGTTATCA +
Preference number: 5 (lower is better)
Translates to: TQFGGQAVIKQSINSSGAIYIHN*EDRQLS
Trigger: TGATAACTGCCTGTCCTCCAAATTGTGTATGTATAT...TGCCCCACTTGAGTTTATAGACTGTTTGATAACTGCCTGTCCTCCAAATTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS TCA 90 bp TTTGGAAAGACAGATTCTTCCTTAGAACTGTTAGTGACAAGTCAGTaGAATTTCTTTCCATGTCTGGGTATGTGTATAAGTGCCCATGTG +
Preference number: 5 (lower is better)
Translates to: FGKTDSSLELLVTSQ*NFFPCLGMCISAHV
Trigger: CACATGGGCACTTATACACATACCCAGACATGGAAAGAAATTTCACTGACTTGTCACTAACAGTTCTAAGGAAGAATCTGTCTTTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS TCA 90 bp AAAATGAGGACAATAATATTTCCCAAGGTTGCTGCGATGTTTAAATaGCCCAGTAGAAATCAAATGACAACAAAGCCCAGCATAGTGTCC +
Preference number: 5 (lower is better)
Translates to: KMRTIIFPKVAAMFK*PSRNQMTTKPSIVS
Trigger: GGACACTATGCTGGGCTTTGTTGTCATTTGATTTCTACTGGGTCATTTAAACATCGCAGCAACCTTGGGAAATATTATTGTCCTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS-3UTR CAA 90 bp AGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTAACAGCGGGTAATTTATaGCTTGGTAGAGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: RLVLLGKATKAAIAQNYVTAGNL*LGREIF
Trigger: GAAAATTTCTCTACCAAGCAATAAATTACCCGCTGT...TACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TGCCTTGAGACTCTGTATCAATACTTTTGGTTTCTGACTGAAGGTGGACAGAAATGTAAGAACTACGATTaGCTTCCAGTGAAACCATTT +
Preference number: 5 (lower is better)
Translates to: CLETLYQYFWFLTEGGQKCKNYD*LPVKPF
Trigger: AAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACA...TTTCTGTCCACCTTCAGTCAGAAACCAAAAGTATTGATACAGAGTCTCAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCTGAGAGTTCAAAGCTaGAGGGAAAGGATGCATTGT +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSLRVQS*RERMHC
Trigger: ACAATGCATCCTTTCCCTCAAGCTTTGAACTCTCAG...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp GGAAAGGCTACAAAAGCAGCCATAGCTCAGAATTATGTATCTGAAGTAAACAAAGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: GKATKAAIAQNYVSEVNKEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...TTTGTTTACTTCAGATACATAATTCTGAGCTATGGCTGCTTTTGTAGCCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 90 bp TTCTGTTACTTACTTATAGCTAAAAGCAACCAAAGAGATGTGTTTTaGGAATTAAGGGAGAGCTGGTATCCTGGCTTTGGAAAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FCYLLIAKSNQRDVF*ELRESWYPGFGKEE
Trigger: TTCTTCCTTTCCAAAGCCAGGATACCAGCTCTCCCTTAATTCTCAAAACACATCTCTTTGGTTGCTTTTAGCTATAAGTAAGTAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS-3UTR CAA 90 bp CCTCTGTGCATTATGACATTGGTGTGGAAATTTAGATCTCAGCTTAATCCTTTCACAGCGGGTAATTTATaGCTTGGTAGAGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: PLCIMTLVWKFRSQLNPFTAGNL*LGREIF
Trigger: GAAAATTTCTCTACCAAGCAATAAATTACCCGCTGT...GAAAGGATTAAGCTGAGATCTAAATTTCCACACCAATGTCATAATGCACAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AAAGGTGATGGGTTAAGAAGCTATAGAGCTAGAAACAACTTCAGATCTCACCTATGTAAGAACTACGATTaGCTTCCAGTGAAACCATTT +
Preference number: 5 (lower is better)
Translates to: KGDGLRSYRARNNFRSHLCKNYD*LPVKPF
Trigger: AAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACA...TAGGTGAGATCTGAAGTTGTTTCTAGCTCTATAGCTTCTTAACCCATCACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTGCTGTCCTTTTGAATaGTGCCAATGGACATCTTCA +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSCCPFE*CQWTSS
Trigger: TGAAGATGTCCATTGGCACAATTCAAAAGGACAGCA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTGAAATGACTGCTGCCTaGAGACTCTGTATCAATACT +
Preference number: 5 (lower is better)
Translates to: SSKATLVMFRKLSETNHFEMTAA*RLCINT
Trigger: AGTATTGATACAGAGTCTCAAGGCAGCAGTCATTTC...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp TGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGGTGTGTGCTTGTTAAGCATTACTaGAGTGCCCAATCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: WYSGNIYTIHLGSTCWCVLVKHY*SAQSSK
Trigger: TTTTGAAGATTGGGCACTCAAGTAATGCTTAACAAG...CACACACCAGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519928.2
ENST00000681641.1
CDS-3UTR CAA 90 bp TCTCTTACTGGTACTCAGGAAATATTTATACAATACACTTGGGTTCTACTTGCTGTTTATTATATACAGTaGAAGCAGGTGGCATCATCC +
Preference number: 5 (lower is better)
Translates to: SLTGTQEIFIQYTWVLLAVYYIQ*KQVASS
Trigger: GGATGATGCCACCTGCTTCAACTGTATATAATAAAC...AGCAAGTAGAACCCAAGTGTATTGTATAAATATTTCCTGAGTACCAGTAAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTGTAAGAACTACGATTaGCTTCCAGTGAAACCATTT +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSCKNYD*LPVKPF
Trigger: AAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp CACAATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: HNYLILFQVSASWKGYKSNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...GCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp TCATCAAAAGCTACATTGGTGATGTTTAGGAAGTTATCAGAAACCAACCACTTTAACCCCAGTCATCTTTaGGCAAAAATGTTACTTCTT +
Preference number: 5 (lower is better)
Translates to: SSKATLVMFRKLSETNHFNPSHL*AKMLLL
Trigger: AAGAAGTAACATTTTTGCCAAAAGATGACTGGGGTT...AAAGTGGTTGGTTTCTGATAACTTCCTAAACATCACCAATGTAGCTTTTGATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519928.2
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCCAGACATGTGCTACATaGAAAAGATTCAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSQTCAT*KRFNLA
Trigger: TGCAAGATTGAATCTTTTCAATGTAGCACATGTCTG...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS-3UTR CAA 90 bp AATTATCTAATCTTATTTCAGGTTAGTGCTTCTTGGAAAGGCTACAAAAGCAGCTATGTTAGGACAGGGTaGAAAGTACTATCTGAAATC +
Preference number: 5 (lower is better)
Translates to: NYLILFQVSASWKGYKSSYVRTG*KVLSEI
Trigger: GATTTCAGATAGTACTTTCAACCCTGTCCTAACATA...GCTGCTTTTGTAGCCTTTCCAAGAAGCACTAACCTGAAATAAGATTAGATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519928.2
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS CCA 72 bp CCTGGTCTCAGTCGAACAGCAGTGCCCAGGCTGGGGTaGGGAAGCGAGCATGTGCCATGTACAGTAGGCCTC +
Preference number: 6 (lower is better)
Translates to: PGLSRTAVPRLG*GSEHVPCTVGL
Trigger: GAGGCCTACTGTACATGGCACATGCTCGCTTCCCCACCCCAGCCTGGGCACTGCTGTTCGACTGAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS GCA 72 bp CCACAGTCAGGGAGAGGTATGGCTAGGGTTCCAGGCTaGAGGGTTGGTAGGAAGGGGAAGCTCCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: PQSGRGMARVPG*RVGRKGKLLGT
Trigger: AGTGCCCAGGAGCTTCCCCTTCCTACCAACCCTGCAGCCTGGAACCCTAGCCATACCTCTCCCTGACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518497.6
ENST00000519325.1
ENST00000519612.5
ENST00000520327.6
ENST00000521527.5
ENST00000522440.5
CDS GCA 72 bp GTCCTTTGCACTCATCTGGGGCCACTTGGGGCTCAGTaGTGCCCTTGGCTGAAGGACCAGTTCTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: VLCTHLGPLGAQ*CPWLKDQFFLE
Trigger: CTCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTGCAAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519325.1
ENST00000521527.5
CDS CAA 72 bp CACTCATCTGGGGCCACTTGGGGCTCAGTGCTGCCCTaGGCTGAAGGACCAGTTCTTCCTGGAGATGCAGAA +
Preference number: 6 (lower is better)
Translates to: HSSGATWGSVLP*AEGPVLPGDAE
Trigger: TTCTGCATCTCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGATGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519325.1
ENST00000521527.5
CDS TCA 72 bp ATCTGGGGCCACTTGGGGCTCAGTGCTGCCCTTGGCTaGAGGACCAGTTCTTCCTTCTGTGTTGGTCTCACT +
Preference number: 6 (lower is better)
Translates to: IWGHLGLSAALG*RTSSSFCVGLT
Trigger: AGTGAGACCAACACAGAAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS CCA 72 bp CTCAAAGGCTGTACTGTCCACAGTCAGGGAGAGGTATaGCTAGGGTTCCAGGCTGCAGGGTTGGTAGGAAGG +
Preference number: 6 (lower is better)
Translates to: LKGCTVHSQGEV*LGFQAAGLVGR
Trigger: CCTTCCTACCAACCCTGCAGCCTGGAACCCTAGCCATACCTCTCCCTGACTGTGGACAGTACAGCCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518497.6
ENST00000519325.1
ENST00000519612.5
ENST00000520327.6
ENST00000521527.5
ENST00000522440.5
CDS CAA 72 bp GAAGGCAGAGGCTGTGCATCTGAGCCCTCTCTGCTCTaGGGCGGTGGGAATAATCCTGGTCTCAGTCGAACA +
Preference number: 6 (lower is better)
Translates to: EGRGCASEPSLL*GGGNNPGLSRT
Trigger: TGTTCGACTGAGACCAGGATTATTCCCACCGCCCAAGAGCAGAGAGGGCTCAGATGCACAGCCTCTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS TCA 72 bp ATCTGGGGCCACTTGGGGCTCAGTGCTGCCCTTGGCTaGAGGACCAGTTCTTCCTGGAGATGCAGAATCATT +
Preference number: 6 (lower is better)
Translates to: IWGHLGLSAALG*RTSSSWRCRII
Trigger: AATGATTCTGCATCTCCAGGAAGAACTGGTCCTTCAGCCAAGGGCAGCACTGAGCCCCAAGTGGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519325.1
ENST00000521527.5
CDS CCA 72 bp GACTGGAATTGGTTCAGACACCTCAGGAACTCTTCCTaGAGCCAGTCCATCTGCTGGCTCCTCTGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: DWNWFRHLRNSS*SQSICWLLCPR
Trigger: TCTGGGACAGAGGAGCCAGCAGATGGACTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp CCACCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCC +
Preference number: 6 (lower is better)
Translates to: PPSVLVSLGAAD*SCCYSAILPDP
Trigger: GGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS CAA 90 bp CTGGAGCCAGTCCATCTGCTGGCTCCTCTGTCCCAGAATCACCTCTaGACACTTTTCAGGAGGCATGTGCCATGTACAGTAGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LEPVHLLAPLSQNHL*TLFRRHVPCTVGLC
Trigger: ACAGAGGCCTACTGTACATGGCACATGCCTCCTGAAAAGTGTCAAGAGGTGATTCTGGGACAGAGGAGCCAGCAGATGGACTGGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS GCA 72 bp GTGTTGGTCTCACTGGGAGCTGCAGACTGGAGCTGTTaGTATTCAGCCATCTTGCCAGATCCCCAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: VLVSLGAADWSC*YSAILPDPQVN
Trigger: ATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518497.6
ENST00000519612.5
ENST00000522440.5
CDS GCA 72 bp AGATCCTTGATGATTAAGGAGGTGGAGGCACCTGGGTaGCCCCTGAACACCCTGATTCCCAGTTTCCCCATA +
Preference number: 6 (lower is better)
Translates to: RSLMIKEVEAPG*PLNTLIPSFPI
Trigger: TATGGGGAAACTGGGAATCAGGGTGTTCAGGGGGCACCCAGGTGCCTCCACCTCCTTAATCATCAAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp GAGGCCTCTGCCAACTACAGGAATGCAGACTGGAATTaGTTCAGACACCTCAGGAACTCTTCCTGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: EASANYRNADWN*FRHLRNSSWSQ
Trigger: CTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp ACTGAGACACGTGAGCCCAGATCTTGCTGTTCTCTCTaGAGGCCTCTGCCAACTACAGGAATGCAGACTGGA +
Preference number: 6 (lower is better)
Translates to: TETREPRSCCSL*RPLPTTGMQTG
Trigger: TCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAAGATCTGGGCTCACGTGTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp CTTCCTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCC +
Preference number: 6 (lower is better)
Translates to: LPSVLVSLGAAD*SCCYSAILPDP
Trigger: GGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS CAA 72 bp GGAGGCCTCTGCCAACTACAGGAATGCAGACTGGAATaGGTTCAGACACCTCAGGAACTCTTCCTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: GGLCQLQECRLE*VQTPQELFLEP
Trigger: TGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CAA 90 bp GTTCTCTCTGGAGGCCTCTGCCAACTACAGGAATGCAGACTGGAATaGGTTCAGACACCTCAGGAACTCTTCCTGGAGCCAGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: VLSGGLCQLQECRLE*VQTPQELFLEPVHL
Trigger: CAGATGGACTGGCTCCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS GCA 72 bp GCTGTTCTCTCTGGAGGCCTCTGCCAACTACAGGAATaGAGACTGGAATTGGTTCAGACACCTCAGGAACTC +
Preference number: 6 (lower is better)
Translates to: AVLSGGLCQLQE*RLELVQTPQEL
Trigger: GAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS GCA 72 bp GTGAGCCCAGATCTTGCTGTTCTCTCTGGAGGCCTCTaGCAACTACAGGAATGCAGACTGGAATTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: VSPDLAVLSGGL*QLQECRLELVQ
Trigger: CTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGAGAACAGCAAGATCTGGGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp TCTCTGGAGGCCTCTGCCAACTACAGGAATGCAGACTaGAATTGGTTCAGACACCTCAGGAACTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SLEASANYRNAD*NWFRHLRNSSW
Trigger: CCAGGAAGAGTTCCTGAGGTGTCTGAACCAATTCCAGTCTGCATTCCTGTAGTTGGCAGAGGCCTCCAGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp CTGAAGGACCAGTTCTTCCTTCTGTGTTGGTCTCACTaGGAGCTGCAGACTGGAGCTGTTGCTATTCAGCCA +
Preference number: 6 (lower is better)
Translates to: LKDQFFLLCWSH*ELQTGAVAIQP
Trigger: TGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGAAGAACTGGTCCTTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519612.5
CDS CCA 72 bp TTGTCAGCATGTCTTCTTGGAAGGCCATATTCATCTTaGCTCTCTCTCAGACCCTGGAATCCGACCGCCGTC +
Preference number: 6 (lower is better)
Translates to: LSACLLGRPYSS*LSLRPWNPTAV
Trigger: GACGGCGGTCGGATTCCAGGGTCTGAGAGAGAGCCAAGATGAATATGGCCTTCCAAGAAGACATGCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520327.6
ENST00000521527.5
CDS CAA 72 bp CTTGTCAGCATGTCTTCTTGGAAGGCCATATTCATCTaGGCTCTCTCTCAGACCCTGGAATCCGACCGCCGT +
Preference number: 6 (lower is better)
Translates to: LVSMSSWKAIFI*ALSQTLESDRR
Trigger: ACGGCGGTCGGATTCCAGGGTCTGAGAGAGAGCCAAGATGAATATGGCCTTCCAAGAAGACATGCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520327.6
ENST00000521527.5
CDS CAA 90 bp GAGTCTTTTCTTGTCAGCATGTCTTCTTGGAAGGCCATATTCATCTaGGCTCTCTCTCAGACCCTGGAATCCGACCGCCGTCTAGCTCCT +
Preference number: 6 (lower is better)
Translates to: ESFLVSMSSWKAIFI*ALSQTLESDRRLAP
Trigger: AGGAGCTAGACGGCGGTCGGATTCCAGGGTCTGAGAGAGAGCCAAGATGAATATGGCCTTCCAAGAAGACATGCTGACAAGAAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520327.6
ENST00000521527.5
CDS GCA 72 bp AAAGATGGTGTAGACCTTGGGCCTAAACAAGTCCCATaGCTAGGAGGAGGCAGGAGTGTCAGGATCACAGAA +
Preference number: 6 (lower is better)
Translates to: KDGVDLGPKQVP*LGGGRSVRITE
Trigger: TTCTGTGATCCTGACACTCCTGCCTCCTCCTAGGCATGGGACTTGTTTAGGCCCAAGGTCTACACCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS GCA 72 bp GTCGCACTGAGATGTGCTGGGTACCTCAGTTGGAAATaGAGAAATCACCCACCTTCTGTGTTGGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: VALRCAGYLSWK*RNHPPSVLVSL
Trigger: CAGTGAGACCAACACAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCCAGCACATCTCAGTGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS CCA 72 bp AAAACTTCTGTGTTGGTCTCACTGGGAGCTGCAGACTaGAGCTGTTGCTATTCAGCCATCTTGCCAGATCCC +
Preference number: 6 (lower is better)
Translates to: KTSVLVSLGAAD*SCCYSAILPDP
Trigger: GGGATCTGGCAAGATGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS CCA 72 bp AATGCAGAAATCACCCACCTTCTGTGTTGGTCTCACTaGGAGCTGCAGACTGGAGCTGTTGCTATTCAGCCA +
Preference number: 6 (lower is better)
Translates to: NAEITHLLCWSH*ELQTGAVAIQP
Trigger: TGGCTGAATAGCAACAGCTCCAGTCTGCAGCTCCCAGTGAGACCAACACAGAAGGTGGGTGATTTCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522440.5
CDS GCA 72 bp AGTGAGCAGGTTGAATTAATTAGTAACTCATGTTCCTaGATGGTGGCTCTCTGGCGGGCTTCAAAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SEQVELISNSCS*MVALWRASKGG
Trigger: GCCTCCCTTTGAAGCCCGCCAGAGAGCCACCATGCAGGAACATGAGTTACTAATTAATTCAACCTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS TCA 72 bp TCCACAGGTTTTGCATCCACGAATTCAACCAGTCGCTaGTCAAAACTTCTGTGTTGGTCTCACTGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: STGFASTNSTSR*SKLLCWSHWEL
Trigger: CAGCTCCCAGTGAGACCAACACAGAAGTTTTGATCAGCGACTGGTTGAATTCGTGGATGCAAAACCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS TCA 72 bp TCCTTCCCAGGAGTAGGATTTCCTCAGTGGGACATCTaGAATATGGCTCCATCAGTCACACGCAGTAAAAGG +
Preference number: 6 (lower is better)
Translates to: SFPGVGFPQWDI*NMAPSVTRSKR
Trigger: CCTTTTACTGCGTGTGACTGATGGAGCCATATTTCAGATGTCCCACTGAGGAAATCCTACTCCTGGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS CCA 72 bp TCAGCCCTTCCCTTGAGACATAATTTCCTGATCCCTTaGTGTCCTGGCGCTTTGAACATGCTCCACTTTATC +
Preference number: 6 (lower is better)
Translates to: SALPLRHNFLIP*CPGALNMLHFI
Trigger: GATAAAGTGGAGCATGTTCAAAGCGCCAGGACACCAAGGGATCAGGAAATTATGTCTCAAGGGAAGGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS CAA 90 bp ATAATCCCGTTTGTTGACTTGTTTATAATCTGCTTTTCGCACTGCTaGAGAGCAGGGCCCTTCCGTTCGTTGACTGATGTGTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: IIPFVDLFIICFSHC*RAGPFRSLTDVSLE
Trigger: CTCCAGGGACACATCAGTCAACGAACGGAAGGGCCCTGCTCTCAAGCAGTGCGAAAAGCAGATTATAAACAAGTCAACAAACGGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322602.9
ENST00000520899.1
ENST00000679729.1
CDS TCA 72 bp TTCAGCCATCTTGCCAGATCCCCAGGTGAATGTGCTTaGGTTGTAATCTTTTTCTGGTGGAGGATGTTGCCT +
Preference number: 6 (lower is better)
Translates to: FSHLARSPGECA*VVIFFWWRMLP
Trigger: AGGCAACATCCTCCACCAGAAAAAGATTACAACTCAAGCACATTCACCTGGGGATCTGGCAAGATGGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518497.6
ENST00000519612.5
ENST00000522440.5
CDS TCA 72 bp GCTGTTGCTATTCAGCCATCTTGCCAGATCCCCAGGTaGATGTGCTTGAGTTGTAATCTTTTTCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: AVAIQPSCQIPR*MCLSCNLFLVE
Trigger: CTCCACCAGAAAAAGATTACAACTCAAGCACATTCACCTGGGGATCTGGCAAGATGGCTGAATAGCAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518497.6
ENST00000519612.5
ENST00000522440.5
CDS GCA 72 bp CCGTTTGTTGACTTGTTTATAATCTGCTTTTCGCACTaGTTGAGAGCAGGGCCCTTCCGTTCGTTGACTGAT +
Preference number: 6 (lower is better)
Translates to: PFVDLFIICFSH*LRAGPFRSLTD
Trigger: ATCAGTCAACGAACGGAAGGGCCCTGCTCTCAAGCAGTGCGAAAAGCAGATTATAAACAAGTCAACAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322602.9
ENST00000520899.1
ENST00000679729.1
CDS CCA 72 bp GTTCCCTCTTTGGCTATGATGACATCATCATCCGAGTaGGAACTTGCTGAGAGTTCAAAGCTTGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: VPSLAMMTSSSE*ELAESSKLEGK
Trigger: CTTTCCCTCAAGCTTTGAACTCTCAGCAAGTTCCCACTCGGATGATGATGTCATCATAGCCAAAGAGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS CCA 72 bp CAGAATCATTTGTATGCTGTCCAAGGTGCTGATAAGTaGTACTCTTATGGAAATCGCCAGGGGAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: QNHLYAVQGADK*YSYGNRQGSSL
Trigger: CAAGCTGCTCCCCTGGCGATTTCCATAAGAGTACCACTTATCAGCACCTTGGACAGCATACAAATGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518497.6
ENST00000519325.1
ENST00000519612.5
ENST00000520327.6
ENST00000521527.5
ENST00000522440.5
CDS CCA 72 bp CGCTTTGAACATGCTCCACTTTATCTGTGTCAAATGTaGGTTCTTCCTTCCCATTTTGTCCCAGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RFEHAPLYLCQM*VLPSHFVPVSR
Trigger: CCTGCTCACTGGGACAAAATGGGAAGGAAGAACCCACATTTGACACAGATAAAGTGGAGCATGTTCAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS CCA 72 bp TATGTAAATCCACACAAACAAATTCTGGGCCCTGTTTaGCGTCCTGGGAGAGTTGACTCCATTTCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: YVNPHKQILGPV*RPGRVDSISGA
Trigger: AGCTCCTGAAATGGAGTCAACTCTCCCAGGACGCCAAACAGGGCCCAGAATTTGTTTGTGTGGATTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521527.5
CDS CAA 72 bp TTTGTTGACTTGTTTATAATCTGCTTTTCGCACTGCTaGAGAGCAGGGCCCTTCCGTTCGTTGACTGATGTG +
Preference number: 6 (lower is better)
Translates to: FVDLFIICFSHC*RAGPFRSLTDV
Trigger: CACATCAGTCAACGAACGGAAGGGCCCTGCTCTCAAGCAGTGCGAAAAGCAGATTATAAACAAGTCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322602.9
ENST00000520899.1
ENST00000679729.1
CDS CAA 72 bp AGACATAATTTCCTGATCCCTTGGTGTCCTGGCGCTTaGAACATGCTCCACTTTATCTGTGTCAAATGTGGG +
Preference number: 6 (lower is better)
Translates to: RHNFLIPWCPGA*NMLHFICVKCG
Trigger: CCCACATTTGACACAGATAAAGTGGAGCATGTTCAAAGCGCCAGGACACCAAGGGATCAGGAAATTATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519325.1
CDS CAA 72 bp GTGAGAAGACACTCAATTGAAACGCTAGTTCCCTCTTaGGCTATGATGACATCATCATCCGAGTGGGAACTT +
Preference number: 6 (lower is better)
Translates to: VRRHSIETLVPS*AMMTSSSEWEL
Trigger: AAGTTCCCACTCGGATGATGATGTCATCATAGCCAAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 72 bp ATCTTCATAGTGACTGGCTGTGAGAAGACACTCAATTaGAACGCTAGTTCCCTCTTTGGCTATGATGACATC +
Preference number: 6 (lower is better)
Translates to: IFIVTGCEKTLN*NASSLFGYDDI
Trigger: GATGTCATCATAGCCAAAGAGGGAACTAGCGTTTCAATTGAGTGTCTTCTCACAGCCAGTCACTATGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS CCA 72 bp GCCAAATCACTCAGATTCTTAAGCCTCAGATTAGAATaGCCAAGACTGGGGTGCAGAAATCTTTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: AKSLRFLSLRLE*PRLGCRNLFFC
Trigger: ACAGAAGAAAAGATTTCTGCACCCCAGTCTTGGCCATTCTAATCTGAGGCTTAAGAATCTGAGTGATTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS CAA 72 bp TTGAGTTGTAATCTTTTTCTGGTGGAGGATGTTGCCTaGGTATTGATGCTGATGAATCAGGGTAGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: LSCNLFLVEDVA*VLMLMNQGSGS
Trigger: GCTACCACTACCCTGATTCATCAGCATCAATACCAAGGCAACATCCTCCACCAGAAAAAGATTACAACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518497.6
ENST00000519612.5
ENST00000522440.5
CDS CCA 72 bp TCACCAGGACTTCTTTGTCTTAAAAATCTTCCCCCATaGAGAAAGCAGCAATTTAAGTGGCAAAGATGGTGT +
Preference number: 6 (lower is better)
Translates to: SPGLLCLKNLPP*RKQQFKWQRWC
Trigger: ACACCATCTTTGCCACTTAAATTGCTGCTTTCTCCATGGGGGAAGATTTTTAAGACAAAGAAGTCCTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS CAA 90 bp AGAGTTCAAAGCTTGAGGGAAAGGATGCATTGTAAGAACTACGATTaGCTTCCAGTGAAACCATTTGGTCGAAGTCCACATCTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: RVQSLRERMHCKNYD*LPVKPFGRSPHLPK
Trigger: TTTTGGAAGATGTGGACTTCGACCAAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACAATGCATCCTTTCCCTCAAGCTTTGAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 72 bp AAAGGATGCATTGTAAGAACTACGATTTGCTTCCAGTaGAACCATTTGGTCGAAGTCCACATCTTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: KGCIVRTTICFQ*NHLVEVHIFQN
Trigger: GTTTTGGAAGATGTGGACTTCGACCAAATGGTTTCACTGGAAGCAAATCGTAGTTCTTACAATGCATCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1
CDS TCA 72 bp TTACTTATAGCTAAAAGCAACCAAAGAGATGTGTTTTaGGAATTAAGGGAGAGCTGGTATCCTGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: LLIAKSNQRDVF*ELRESWYPGFG
Trigger: TCCAAAGCCAGGATACCAGCTCTCCCTTAATTCTCAAAACACATCTCTTTGGTTGCTTTTAGCTATAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518497.6
CDS TCA 72 bp ACAATAATATTTCCCAAGGTTGCTGCGATGTTTAAATaGCCCAGTAGAAATCAAATGACAACAAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TIIFPKVAAMFK*PSRNQMTTKPS
Trigger: GCTGGGCTTTGTTGTCATTTGATTTCTACTGGGTCATTTAAACATCGCAGCAACCTTGGGAAATATTATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520327.6
CDS CAA 72 bp CTTCTACACTACAACAAAAGCACAGCGGGTAATTTATaGCTTGGTAGAGAAATTTTCCAAACAAGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: LLHYNKSTAGNL*LGREIFQTSGR
Trigger: TCTACCACTTGTTTGGAAAATTTCTCTACCAAGCAATAAATTACCCGCTGTGCTTTTGTTGTAGTGTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322602.9
ENST00000519928.2
ENST00000520899.1
ENST00000522177.1
ENST00000522782.6
ENST00000679729.1
ENST00000681641.1