RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEX3B (Homo sapiens)

Ensembl gene IDs: ENSG00000183496

Ensembl transcript IDs: ENST00000329713.5, ENST00000558133.1

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCACCCGGCGAGCCAGGTGGTGCTCTCCCGCCCCCGGGGCCATGTaGAAGGGTGGAGACAGGCGCGGGCAGCTGGTGCCAGGGTGCAGC +
Preference number: 1 (lower is better)
Translates to: RTRRARWCSPAPGAM*KGGDRRGQLVPGCS
Trigger: GCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp AGGCCTCCTCCACCCGGGTCGCTGCGCACCCGGCGAGCCAGGTGGTaGTCTCCCGCCCCCGGGGCCATGTGCAAGGGTGGAGACAGGCGC +
Preference number: 1 (lower is better)
Translates to: RPPPPGSLRTRRARW*SPAPGAMCKGGDRR
Trigger: GCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAGGAGGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp CGTTGGCATAAGCGGCGTAGGCCAGGCCTCCTCCACCCGGGTCGCTaGGCACCCGGCGAGCCAGGTGGTGCTCTCCCGCCCCCGGGGCCA +
Preference number: 1 (lower is better)
Translates to: RWHKRRRPGLLHPGR*APGEPGGALPPPGP
Trigger: TGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAGGAGGCCTGGCCTACGCCGCTTATGCCAACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp GCGAGCCAGGTGGTGCTCTCCCGCCCCCGGGGCCATGTGCAAGGGTaGAGACAGGCGCGGGCAGCTGGTGCCAGGGTGCAGCCGGCGGTG +
Preference number: 1 (lower is better)
Translates to: ASQVVLSRPRGHVQG*RQARAAGARVQPAV
Trigger: CACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp GCCAGGCCTCCTCCACCCGGGTCGCTGCGCACCCGGCGAGCCAGGTaGTGCTCTCCCGCCCCCGGGGCCATGTGCAAGGGTGGAGACAGG +
Preference number: 1 (lower is better)
Translates to: ARPPPPGSLRTRRAR*CSPAPGAMCKGGDR
Trigger: CCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAGGAGGCCTGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 90 bp AGACGGCAGGACAAGAGATGGGCGGAAAGGGGGCGTCTCCCTCACTaGCCTCGGGCCGCGCCACGGGCTGGGCAGCGGATCCCACCCGCG +
Preference number: 1 (lower is better)
Translates to: RRQDKRWAERGRLPH*PRAAPRAGQRIPPA
Trigger: CGCGGGTGGGATCCGCTGCCCAGCCCGTGGCGCGGCCCGAGGTCAGTGAGGGAGACGCCCCCTTTCCGCCCATCTCTTGTCCTGCCGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp GGTGGAGACAGGCGCGGGCAGCTGGTGCCAGGGTGCAGCCGGCGGTaGACCAATAGCCCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCA +
Preference number: 1 (lower is better)
Translates to: GGDRRGQLVPGCSRR*TNSPRLALEGALAP
Trigger: TGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp GGAAAGGGGGCGTCTCCCTCACTGACCTCGGGCCGCGCCACGGGCTaGGCAGCGGATCCCACCCGCGAGGCGCTCGAGGAACAGCCCATT +
Preference number: 1 (lower is better)
Translates to: GKGASPSLTSGRATG*AADPTREALEEQPI
Trigger: AATGGGCTGTTCCTCGAGCGCCTCGCGGGTGGGATCCGCTGCCCAGCCCGTGGCGCGGCCCGAGGTCAGTGAGGGAGACGCCCCCTTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp ACGTGTCCGACGGCTGCAAGCCAGGCAGCTGTGCCCCCAGCCCGTTaGCATAAGCGGCGTAGGCCAGGCCTCCTCCACCCGGGTCGCTGC +
Preference number: 1 (lower is better)
Translates to: TCPTAASQAAVPPAR*HKRRRPGLLHPGRC
Trigger: GCAGCGACCCGGGTGGAGGAGGCCTGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp GCCATGTGCAAGGGTGGAGACAGGCGCGGGCAGCTGGTGCCAGGGTaGAGCCGGCGGTGCACCAATAGCCCCAGGTTGGCGTTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: AMCKGGDRRGQLVPG*SRRCTNSPRLALEG
Trigger: GCCCTCCAACGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp AGAGGAGGAGCCCGACGTGTCCGACGGCTGCAAGCCAGGCAGCTGTaGCCCCAGCCCGTTGGCATAAGCGGCGTAGGCCAGGCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: RGGARRVRRLQARQL*PQPVGISGVGQASS
Trigger: GGAGGAGGCCTGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGTCGGGCTCCTCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp GGGGGTGGGCGTGATGCTGGGGGTGGGCTTGCTCCAGAGGCTGCCTaGGCCGGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATC +
Preference number: 1 (lower is better)
Translates to: GGGRDAGGGLAPEAA*AGPAGPMMQIEAHI
Trigger: GATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCCTCTGGAGCAAGCCCACCCCCAGCATCACGCCCACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp CTGGGCAGCGGATCCCACCCGCGAGGCGCTCGAGGAACAGCCCATTaGCTGCCTGGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCAA +
Preference number: 1 (lower is better)
Translates to: LGSGSHPRGARGTAH*LPGPPPVTAVVPNQ
Trigger: TTGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCGAGCGCCTCGCGGGTGGGATCCGCTGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp CGGATCCCACCCGCGAGGCGCTCGAGGAACAGCCCATTGGCTGCCTaGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCAAACCCGAGA +
Preference number: 1 (lower is better)
Translates to: RIPPARRSRNSPLAA*PSPSDCSRPEPNPR
Trigger: TCTCGGGTTTGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCGAGCGCCTCGCGGGTGGGATCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp GCTGAAGTCGCGATGCCTCAGCGCTGGTCGACTGGGGGTAGGGGGTaGGGTGTGAGTCCCGGGACCCATTGTTCCTCCTCTGGGCTCCAT +
Preference number: 1 (lower is better)
Translates to: AEVAMPQRWSTGGRG*GVSPGTHCSSSGLH
Trigger: ATGGAGCCCAGAGGAGGAACAATGGGTCCCGGGACTCACACCCCACCCCCTACCCCCAGTCGACCAGCGCTGAGGCATCGCGACTTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp CGCGGCTGCCTTTACGCCGAAGCCCGGAGGAAGAGGATGAAGAGCTaGAGGAGGAGCTGGACGAAGAGGAGGAGCCCGACGTGTCCGACG +
Preference number: 1 (lower is better)
Translates to: RGCLYAEARRKRMKS*RRSWTKRRSPTCPT
Trigger: CGTCGGACACGTCGGGCTCCTCCTCTTCGTCCAGCTCCTCCTCCAGCTCTTCATCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 90 bp GGAGCAGTCGCGGCTGCCTTTACGCCGAAGCCCGGAGGAAGAGGATaGAGAGCTGGAGGAGGAGCTGGACGAAGAGGAGGAGCCCGACGT +
Preference number: 1 (lower is better)
Translates to: GAVAAAFTPKPGGRG*RAGGGAGRRGGARR
Trigger: ACGTCGGGCTCCTCCTCTTCGTCCAGCTCCTCCTCCAGCTCTTCATCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp TACGCCGAAGCCCGGAGGAAGAGGATGAAGAGCTGGAGGAGGAGCTaGACGAAGAGGAGGAGCCCGACGTGTCCGACGGCTGCAAGCCAG +
Preference number: 1 (lower is better)
Translates to: YAEARRKRMKSWRRS*TKRRSPTCPTAASQ
Trigger: CTGGCTTGCAGCCGTCGGACACGTCGGGCTCCTCCTCTTCGTCCAGCTCCTCCTCCAGCTCTTCATCCTCTTCCTCCGGGCTTCGGCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 90 bp CTGCAGTCGTCCCGAACCAAACCCGAGAATCCCAGAAAAGTCATCTaGGGAGATGCCGCTGGGATCCAGCTGGGCGCGCCGTCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: LQSSRTKPENPRKVI*GDAAGIQLGAPSAL
Trigger: CAGAGCTGACGGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGGATTCTCGGGTTTGGTTCGGGACGACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp GTCCCGAACCAAACCCGAGAATCCCAGAAAAGTCATCTGGGGAGATaGCGCTGGGATCCAGCTGGGCGCGCCGTCAGCTCTGAAGACACG +
Preference number: 1 (lower is better)
Translates to: VPNQTRESQKSHLGR*RWDPAGRAVSSEDT
Trigger: CGTGTCTTCAGAGCTGACGGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGGATTCTCGGGTTTGGTTCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp GCCACCCCCGGGGAAGACCACGGAGGAGGAAGAAGCAGACGAAGATaGAGAAGAAGAGCAGGAAGAAGATACCGGAGCTGCAGGTCCGCC +
Preference number: 1 (lower is better)
Translates to: ATPGEDHGGGRSRRR*RRRAGRRYRSCRSA
Trigger: GGCGGACCTGCAGCTCCGGTATCTTCTTCCTGCTCTTCTTCTGCATCTTCGTCTGCTTCTTCCTCCTCCGTGGTCTTCCCCGGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 90 bp GCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCTATaGTCACTCCTCCTCCTTCCTCCTCCCAAAGGACTGATCAAAGGC +
Preference number: 1 (lower is better)
Translates to: APFRFAEIQNPPPIL*SLLLLPPPKGLIKG
Trigger: GCCTTTGATCAGTCCTTTGGGAGGAGGAAGGAGGAGGAGTGAGCATAGGATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 90 bp CTCCCATCCTATGCTCACTCCTCCTCCTTCCTCCTCCCAAAGGACTaGTCAAAGGCCCCCTCCCCCAAGCATCTTACATTTAAATTGTCT +
Preference number: 1 (lower is better)
Translates to: LPSYAHSSSFLLPKD*SKAPSPKHLTFKLS
Trigger: AGACAATTTAAATGTAAGATGCTTGGGGGAGGGGGCCTTTGATCAGTCCTTTGGGAGGAGGAAGGAGGAGGAGTGAGCATAGGATGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 90 bp GAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTaGTGCAGATATCCTGGCAAATTCCTTTACTTAAAAATTAAATTT +
Preference number: 1 (lower is better)
Translates to: EHAFQVFRFPRLQYS*CRYPGKFLYLKIKF
Trigger: AAATTTAATTTTTAAGTAAAGGAATTTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR TCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGGCGCGCCGTCAGCTCTaGAGACACGGGGAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PRLALEGALAPPPGKTTEARRQL*RHGEGA
Trigger: AGCCCCTTCCCCGTGTCTTCAGAGCTGACGGCGCGC...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGGAGGCAGGCGAGCGCTaGGGAAAGAGGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PRLALEGALAPPPGKTTEEAGER*GKRVGR
Trigger: CCTCCCCACCCTCTTTCCCCAGCGCTCGCCTGCCTC...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGGGGCGTCTCCCTCACTaGCCTCGGGCCGCGCCACGG +
Preference number: 2 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVGRLPH*PRAAPR
Trigger: CCGTGGCGCGGCCCGAGGTCAGTGAGGGAGACGCCC...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGGCGATGCCTCAGCGCTaGTCGACTGGGGGTAGGGGG +
Preference number: 2 (lower is better)
Translates to: GGPGTAPLSAVFLFREARAMPQR*STGGRG
Trigger: CCCCCTACCCCCAGTCGACCAGCGCTGAGGCATCGC...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CAA 90 bp GCTGGGCAGCGGATCCCACCCGCGAGGCGCTCGAGGAACAGCCCATaGGCTGCCTGGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCA +
Preference number: 2 (lower is better)
Translates to: AGQRIPPARRSRNSP*AAWPSPSDCSRPEP
Trigger: TGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCGAGCGCCTCGCGGGTGGGATCCGCTGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGGTACCCGCACTTGGATaGTGGTCTGCCCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: PRLALEGALAPPPGKTTEVPALG*WSARAG
Trigger: ACCTGCCCGGGCAGACCACCATCCAAGTGCGGGTAC...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCAGCTGAAGTCGCGATaGCTCAGCGCTGGTCGACTG +
Preference number: 2 (lower is better)
Translates to: GGPGTAPLSAVFLFREARQLKSR*LSAGRL
Trigger: CAGTCGACCAGCGCTGAGGCATCGCGACTTCAGCTG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGCACCGCGCCGTTGAGTaGCGTGTTCTTATTCCGGGA +
Preference number: 2 (lower is better)
Translates to: PRLALEGALAPPPGKTTEHRAVE*RVLIPG
Trigger: TCCCGGAATAAGAACACGGCACTCAACGGCGCGGTG...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGCGAGGAACAGCCCATTaGCTGCCTGGCCCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RLGGPGTAPLSAVFLFRERGTAH*LPGPPP
Trigger: TGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCG...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTCTTCCCCCAGCACGGTaGGCACTAGCAGCGCCCGCT +
Preference number: 2 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTLPPAR*ALAAPA
Trigger: AGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAG...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGCCCGCACTTGGATGGTaGTCTGCCCGGGCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: AKRAGAVVAVARERLAAGPALGW*SARAGW
Trigger: CCAACCTGCCCGGGCAGACCACCATCCAAGTGCGGG...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGTCTCCCTCCGAGCCATaGCCACATCCTCCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVSPSEP*PHPPSC
Trigger: GCAGGAAGGAGGATGTGGCCATGGCTCGGAGGGAGA...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAGAGCCGGGTCAAAAGTaGGCTGCAGCTCGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: FPLPPARCALAAPAAFKKEPGQK*AAARGS
Trigger: GCTGCCCCGAGCTGCAGCCCACTTTTGACCCGGCTC...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAGTAGGGGGTGGGGTGTaGGTCCCGGGACCCATTGTT +
Preference number: 2 (lower is better)
Translates to: FPLPPARCALAAPAAFKKVGGGV*VPGPIV
Trigger: AACAATGGGTCCCGGGACTCACACCCCACCCCCTAC...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAGACCCGCCGGACCCATaGTGCAGATCGAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: FPLPPARCALAAPAAFKKDPPDP*CRSKPT
Trigger: TGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTC...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGGGCTCCATTCCGCTTTaGAGAAATCCAGAATCCTCC +
Preference number: 2 (lower is better)
Translates to: GGPGTAPLSAVFLFREARGSIPL*RNPESS
Trigger: GGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCC...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAAGAAGATACCGGAGCTaGAGGTCCGCCTCCCGGGGA +
Preference number: 2 (lower is better)
Translates to: FPLPPARCALAAPAAFKKRRYRS*RSASRG
Trigger: TCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCT...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAATGGAGGTGGGCTGGTTaGGGGGCGTTAGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: FPLPPARCALAAPAAFKKWRWAG*GALGEK
Trigger: CTTCTCCCCTAACGCCCCCCAACCAGCCCACCTCCA...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTCGGATCTCAGAGTGTTaGTGGGGCCGGGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTRISEC*WGREGE
Trigger: TTCTCCTTCCCGGCCCCACCAACACTCTGAGATCCG...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTCAGGCACCGCGCCGTTaGGTGCCGTGTTCTTATTCC +
Preference number: 2 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRQAPRR*VPCSYS
Trigger: GGAATAAGAACACGGCACTCAACGGCGCGGTGCCTG...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTCGAAGCCCACATCGGTaGCGTTGGCGTGGAAGTCGT +
Preference number: 2 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRRSPHR*RWRGSR
Trigger: ACGACTTCCACGCCAACGGCACCGATGTGGGCTTCG...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCACGGCAGGACAAGAGATaGGCGGAAAGGGGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASRQDKR*AERGRL
Trigger: GAGACGCCCCCTTTCCGCCCATCTCTTGTCCTGCCG...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGAAAGCTGCAGTATCCTaGTTTCACAGGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: AKRAGAVVAVARERLAAGKAAVS*FHRNSW
Trigger: CCAGGAGTTCCTGTGAAACCAGGATACTGCAGCTTT...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp GGCTGCCTGGGCCGGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGAGAAAATATGCTGGGTaGAGCAGATCTAGAAGATTT +
Preference number: 2 (lower is better)
Translates to: GCLGRTRRTHDADRSPHRRKYAG*SRSRRF
Trigger: AAATCTTCTAGATCTGCTTCACCCAGCATATTTTCT...CCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCTTCCCCCAGCACGGTaGGCACTAGCAGCGCCCGCT +
Preference number: 2 (lower is better)
Translates to: SQELLALPRTFKKDPLCSLPPAR*ALAAPA
Trigger: AGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTGTACGCAGAGCAATGTaGGCCTCAATCTCCTCTCGA +
Preference number: 2 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRVRRAM*ASISSR
Trigger: TCGAGAGGAGATTGAGGCGCACATTGCTCTGCGTAC...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGAGGCAGGCGAGCGCTaGGGAAAGAGGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RACISGVQVSQATVLLMQEAGER*GKRVGR
Trigger: CCTCCCCACCCTCTTTCCCCAGCGCTCGCCTGCCTC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTGGCCCAGATAAGTGGTaGCCCAGGTGGGGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVGPDKW*PRWGSG
Trigger: CCCGCTCCCCCACCTGGGGCACCACTTATCTGGGCC...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTAGCCCATTGGCTGCCTaGCCCTCCCCCAGTGACTGC +
Preference number: 2 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCSPLAA*PSPSDC
Trigger: GCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCT...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR TCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCTCCTCCCAAAGGACTaGTCAAAGGCCCCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: RACISGVQVSQATVLLMQLLPKD*SKAPSP
Trigger: GGGGGAGGGGGCCTTTGATCAGTCCTTTGGGAGGAG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTAGTCATCTGGGGAGATaGCGCTGGGATCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SQELLALPRTFKKDPLCSSHLGR*RWDPAG
Trigger: CCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACT...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCAAGCCAGGCAGCTGTaGCCCCAGCCCGTTGGCATA +
Preference number: 2 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVQARQL*PQPVGI
Trigger: TATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCCCTCCCCCAGTGACTaGAGTCGTCCCGAACCAAAC +
Preference number: 2 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQPSPSD*SRPEPN
Trigger: GTTTGGTTCGGGACGACTGCAGTCACTGGGGGAGGG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTTTAAATTGTCTTTCTaGAGGTGGGCTGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SQELLALPRTFKKDPLCSFKLSF*RWAGWG
Trigger: CCCCCAACCAGCCCACCTCCAGAAAGACAATTTAAA...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCGGATCTCAGAGTGTTaGTGGGGCCGGGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTRISEC*WGREGE
Trigger: TTCTCCTTCCCGGCCCCACCAACACTCTGAGATCCG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCCCAGAAAAGTCATCTaGGGAGATGCCGCTGGGATC +
Preference number: 2 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTPRKVI*GDAAGI
Trigger: GATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGTTTCACAGGAACTCCTaGCCCTTCCACGAACATTCA +
Preference number: 2 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQFHRNS*PFHEHS
Trigger: TGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR CCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCAAAGCTGCAGTATCCTaGTTTCACAGGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFKAAVS*FHRNSW
Trigger: CCAGGAGTTCCTGTGAAACCAGGATACTGCAGCTTT...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR TCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCAGGCTACAGTACTCTTaGTGCAGATATCCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTRLQYS*CRYPGK
Trigger: TTTGCCAGGATATCTGCATCAAGAGTACTGTAGCCT...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR GCA 72 bp AAGCGGCGTAGGCCAGGCCTCCTCCACCCGGGTCGCTaGGCACCCGGCGAGCCAGGTGGTGCTCTCCCGCCC +
Preference number: 3 (lower is better)
Translates to: KRRRPGLLHPGR*APGEPGGALPP
Trigger: GGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAGGAGGCCTGGCCTACGCCGCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp CCTCCACCCGGGTCGCTGCGCACCCGGCGAGCCAGGTaGTGCTCTCCCGCCCCCGGGGCCATGTGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: PPPGSLRTRRAR*CSPAPGAMCKG
Trigger: ACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp GCGTCTCCCTCACTGACCTCGGGCCGCGCCACGGGCTaGGCAGCGGATCCCACCCGCGAGGCGCTCGAGGAA +
Preference number: 3 (lower is better)
Translates to: ASPSLTSGRATG*AADPTREALEE
Trigger: TTCCTCGAGCGCCTCGCGGGTGGGATCCGCTGCCCAGCCCGTGGCGCGGCCCGAGGTCAGTGAGGGAGACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp CGAGCCAGGTGGTGCTCTCCCGCCCCCGGGGCCATGTaGAAGGGTGGAGACAGGCGCGGGCAGCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: RARWCSPAPGAM*KGGDRRGQLVP
Trigger: TGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp GTGGTGCTCTCCCGCCCCCGGGGCCATGTGCAAGGGTaGAGACAGGCGCGGGCAGCTGGTGCCAGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: VVLSRPRGHVQG*RQARAAGARVQ
Trigger: CTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp AGGCGCGGGCAGCTGGTGCCAGGGTGCAGCCGGCGGTaGACCAATAGCCCCAGGTTGGCGTTGGAGGGCGCA +
Preference number: 3 (lower is better)
Translates to: RRGQLVPGCSRR*TNSPRLALEGA
Trigger: TGCGCCCTCCAACGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 72 bp GCCCGGGCAGGTTGGGCGGCCCAGGCACCGCGCCGTTaGGTGCCGTGTTCTTATTCCGGGAGGCGCGGATCA +
Preference number: 3 (lower is better)
Translates to: ARAGWAAQAPRR*VPCSYSGRRGS
Trigger: TGATCCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCTGCCCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp AAGGGTGGAGACAGGCGCGGGCAGCTGGTGCCAGGGTaGAGCCGGCGGTGCACCAATAGCCCCAGGTTGGCG +
Preference number: 3 (lower is better)
Translates to: KGGDRRGQLVPG*SRRCTNSPRLA
Trigger: CGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp GCCCGACGTGTCCGACGGCTGCAAGCCAGGCAGCTGTaGCCCCAGCCCGTTGGCATAAGCGGCGTAGGCCAG +
Preference number: 3 (lower is better)
Translates to: ARRVRRLQARQL*PQPVGISGVGQ
Trigger: CTGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGTCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp GGGCCATGTGCAAGGGTGGAGACAGGCGCGGGCAGCTaGTGCCAGGGTGCAGCCGGCGGTGCACCAATAGCC +
Preference number: 3 (lower is better)
Translates to: GPCARVETGAGS*CQGAAGGAPIA
Trigger: GGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 72 bp CTCCAGAGGCTGCCTGGGCCGGACCCGCCGGACCCATaGTGCAGATCGAAGCCCACATCGGTGCCGTTGGCG +
Preference number: 3 (lower is better)
Translates to: LQRLPGPDPPDP*CRSKPTSVPLA
Trigger: CGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCCTCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp CTGGACGAAGAGGAGGAGCCCGACGTGTCCGACGGCTaGAAGCCAGGCAGCTGTGCCCCCAGCCCGTTGGCA +
Preference number: 3 (lower is better)
Translates to: LDEEEEPDVSDG*KPGSCAPSPLA
Trigger: TGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGTCGGGCTCCTCCTCTTCGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp CCCGCGAGGCGCTCGAGGAACAGCCCATTGGCTGCCTaGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCA +
Preference number: 3 (lower is better)
Translates to: PARRSRNSPLAA*PSPSDCSRPEP
Trigger: TGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCGAGCGCCTCGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp GGGCAGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTaGCGTGTTCTTATTCCGGGAGGCGCGGATCATGGA +
Preference number: 3 (lower is better)
Translates to: GQVGRPRHRAVE*RVLIPGGADHG
Trigger: TCCATGATCCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp GGGAGTGGGAGAGAGAGACAGACACGCCCATTATCCTaGGGTAACCGCGGGGACCGGGGACAGCCCGCGTCC +
Preference number: 3 (lower is better)
Translates to: GSGRERQTRPLS*GNRGDRGQPAS
Trigger: GGACGCGGGCTGTCCCCGGTCCCCGCGGTTACCCCAGGATAATGGGCGTGTCTGTCTCTCTCTCCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp GCGATGCCTCAGCGCTGGTCGACTGGGGGTAGGGGGTaGGGTGTGAGTCCCGGGACCCATTGTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: AMPQRWSTGGRG*GVSPGTHCSSS
Trigger: AGAGGAGGAACAATGGGTCCCGGGACTCACACCCCACCCCCTACCCCCAGTCGACCAGCGCTGAGGCATCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 72 bp GCGGCTGCCTTTACGCCGAAGCCCGGAGGAAGAGGATaGAGAGCTGGAGGAGGAGCTGGACGAAGAGGAGGA +
Preference number: 3 (lower is better)
Translates to: AAAFTPKPGGRG*RAGGGAGRRGG
Trigger: TCCTCCTCTTCGTCCAGCTCCTCCTCCAGCTCTTCATCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp TCCCGAACCAAACCCGAGAATCCCAGAAAAGTCATCTaGGGAGATGCCGCTGGGATCCAGCTGGGCGCGCCG +
Preference number: 3 (lower is better)
Translates to: SRTKPENPRKVI*GDAAGIQLGAP
Trigger: CGGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGGATTCTCGGGTTTGGTTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CAA 90 bp GGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCAAACCCGAGAATCCCAGAAATCGGATCTCAGAGTGTaGGTGGGGCCGGGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: GPPPVTAVVPNQTRESQKSDLRV*VGPGRR
Trigger: TCTCCTTCCCGGCCCCACCAACACTCTGAGATCCGA...TTTCTGGGATTCTCGGGTTTGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp CAAACCCGAGAATCCCAGAAAAGTCATCTGGGGAGATaGCGCTGGGATCCAGCTGGGCGCGCCGTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: QTRESQKSHLGR*RWDPAGRAVSS
Trigger: AGAGCTGACGGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGGATTCTCGGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp TCACTTCGCTCTCGAAGCACACGGAGCAGTCGCGGCTaGCTTTACGCCGAAGCCCGGAGGAAGAGGATGAAG +
Preference number: 3 (lower is better)
Translates to: SLRSRSTRSSRG*LYAEARRKRMK
Trigger: CTTCATCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCCGTGTGCTTCGAGAGCGAAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp CGAGAATCCCAGAAAAGTCATCTGGGGAGATGCCGCTaGGATCCAGCTGGGCGCGCCGTCAGCTCTGAAGAC +
Preference number: 3 (lower is better)
Translates to: RESQKSHLGRCR*DPAGRAVSSED
Trigger: GTCTTCAGAGCTGACGGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGGATTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp GTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTaGGCCTCAATCTCCTCTCGAGCGCGATCCACGTTC +
Preference number: 3 (lower is better)
Translates to: VSSMMPPVRRAM*ASISSRARSTF
Trigger: GAACGTGGATCGCGCTCGAGAGGAGATTGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CAA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGCAGGCTACAGTACTCTaGATGCAGATATCCTGGCAA +
Preference number: 3 (lower is better)
Translates to: AKRAGAVVAVARERLAAGQATVL*MQISWQ
Trigger: TTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTG...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR GCA 72 bp CGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCTATaGTCACTCCTCCTCCTTCCTCCTCCCAAAGGACTG +
Preference number: 3 (lower is better)
Translates to: RFAEIQNPPPIL*SLLLLPPPKGL
Trigger: CAGTCCTTTGGGAGGAGGAAGGAGGAGGAGTGAGCATAGGATGGGAGGAGGATTCTGGATTTCTGCAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CAA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTTCGGATCTCAGAGTGTaGGTGGGGCCGGGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCSDLRV*VGPGRR
Trigger: TCTCCTTCCCGGCCCCACCAACACTCTGAGATCCGA...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR CAA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTGAGTCCCGGGACCCATaGTTCCTCCTCTGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVESRDP*FLLWAP
Trigger: TGGAGCCCAGAGGAGGAACAATGGGTCCCGGGACTC...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 72 bp TATGCTCACTCCTCCTCCTTCCTCCTCCCAAAGGACTaGTCAAAGGCCCCCTCCCCCAAGCATCTTACATTT +
Preference number: 3 (lower is better)
Translates to: YAHSSSFLLPKD*SKAPSPKHLTF
Trigger: AAATGTAAGATGCTTGGGGGAGGGGGCCTTTGATCAGTCCTTTGGGAGGAGGAAGGAGGAGGAGTGAGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CAA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCCAGGCACCGCGCCGTaGAGTGCCGTGTTCTTATTC +
Preference number: 3 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVPGTAP*SAVFLF
Trigger: GAATAAGAACACGGCACTCAACGGCGCGGTGCCTGG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR-3UTR CAA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGGGCTCCATTCCGCTTaGCAGAAATCCAGAATCCTC +
Preference number: 3 (lower is better)
Translates to: RACISGVQVSQATVLLMQGLHSA*QKSRIL
Trigger: GAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CCA 72 bp AATAAAGCTGCAGTATCCTGGTTTCACAGGAACTCCTaGCCCTTCCACGAACATTCAAAAAGGATCCACTGT +
Preference number: 3 (lower is better)
Translates to: NKAAVSWFHRNS*PFHEHSKRIHC
Trigger: ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCAGGATACTGCAGCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCAGGCTACAGTACTCTaGATGCAGATATCCTGGCAA +
Preference number: 3 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTQATVL*MQISWQ
Trigger: TTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR-3UTR CAA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCATCTTACATTTAAATaGTCTTTCTGGAGGTGGGCT +
Preference number: 3 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQHLTFK*SFWRWA
Trigger: AGCCCACCTCCAGAAAGACAATTTAAATGTAAGATG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR TCA 72 bp TTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTaGTGCAGATATCCTGGCAAATTCCTTTACTTAAAA +
Preference number: 3 (lower is better)
Translates to: FQVFRFPRLQYS*CRYPGKFLYLK
Trigger: TTTTAAGTAAAGGAATTTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR CAA 72 bp CCAGGGTGCAGCCGGCGGTGCACCAATAGCCCCAGGTaGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGCSRRCTNSPR*ALEGALAPPPG
Trigger: CCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCTGGGGAGATGCCGCTaGGATCCAGCTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARLGRCR*DPAGRA
Trigger: GGCGCGCCCAGCTGGATCCCAGCGGCATCTCCCCAG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGTGCGGATGGCCTGAGTaGCCGCGGTGTGGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARCGWPE*PRCGRP
Trigger: CGGTCTGCCACACCGCGGTCACTCAGGCCATCCGCA...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CAA 72 bp TGCCCGGGCAGGTTGGGCGGCCCAGGCACCGCGCCGTaGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGATC +
Preference number: 4 (lower is better)
Translates to: CPGRLGGPGTAP*SAVFLFREARI
Trigger: GATCCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCTGCCCGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp GGCTGCCTGGGCCGGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGGCGCGCCGTCAGCTCTaGAGACACGGGGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GCLGRTRRTHDADRSPHRARRQL*RHGEGA
Trigger: AGCCCCTTCCCCGTGTCTTCAGAGCTGACGGCGCGC...CCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGCTCCACCCGGGTCGCTaGGCACCCGGCGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLGGPGTAPLSAVFLFRELHPGR*APGEPG
Trigger: ACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAG...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCCCGCACTTGGATGGTaGTCTGCCCGGGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARPALGW*SARAGW
Trigger: CCAACCTGCCCGGGCAGACCACCATCCAAGTGCGGG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGACAGGCGCGGGCAGCTaGTGCCAGGGTGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVTGAGS*CQGAAG
Trigger: GCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGT...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGGGCCATGTGCAAGGGTaGAGACAGGCGCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARGHVQG*RQARAA
Trigger: AGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCC...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCTCCTCCCAAAGGACTaGTCAAAGGCCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARLLPKD*SKAPSP
Trigger: GGGGGAGGGGGCCTTTGATCAGTCCTTTGGGAGGAG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGCTGCCTGGGCCGGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGGGGTCAAAAGTGGGCTaGAGCTCGGGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GCLGRTRRTHDADRSPHRGSKVG*SSGQPS
Trigger: CGACGGCTGCCCCGAGCTGCAGCCCACTTTTGACCC...CCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGAGAAGATACCGGAGCTaGAGGTCCGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARRRYRS*RSASRG
Trigger: TCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCT...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGCGTTGGAGGGCGCACTaGCGCCACCCCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVRWRAH*RHPRGR
Trigger: TCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACG...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCCAATAGCCCCAGGTTaGCGTTGGAGGGCGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARPIAPG*RWRAHW
Trigger: CCAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
3UTR CAA 72 bp CGGATCCCACCCGCGAGGCGCTCGAGGAACAGCCCATaGGCTGCCTGGCCCTCCCCCAGTGACTGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: RIPPARRSRNSP*AAWPSPSDCSR
Trigger: ACGACTGCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCGAGCGCCTCGCGGGTGGGATCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGCCCTCCCCCAGTGACTaGAGTCGTCCCGAACCAAAC +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARPSPSD*SRPEPN
Trigger: GTTTGGTTCGGGACGACTGCAGTCACTGGGGGAGGG...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGACGATCTCGGCGACATaGTCAGAACTGGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: PRLALEGALAPPPGKTTETISAT*SELGTG
Trigger: GCCAGTACCCAGTTCTGAGCATGTCGCCGAGATCGT...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGGAGTGCCCGGCTGGCTaGCCGCAATGCCGAGCGAAA +
Preference number: 4 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVECPAG*PQCRAK
Trigger: TTTCGCTCGGCATTGCGGCCAGCCAGCCGGGCACTC...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCCCAGGTTGGCGTTaGAGGGCGCACTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTAPGWR*RAHWRH
Trigger: GTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGC...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTCGCCGCCGCTGCCGTTaGGCTCCAGGTCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTRRRCR*APGLRT
Trigger: TGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCG...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTGCTTGCTCCAGAGGCTaGCTGGGCCGGACCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRACSRG*LGRTRR
Trigger: CCGGCGGGTCCGGCCCAGGCAGCCTCTGGAGCAAGC...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGTGGAGGTGGGCTGGTTaGGGGGCGTTAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLGGPGTAPLSAVFLFREWRWAG*GALGEK
Trigger: CTTCTCCCCTAACGCCCCCCAACCAGCCCACCTCCA...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGCGGCAGGACAAGAGATaGGCGGAAAGGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RLGGPGTAPLSAVFLFRERQDKR*AERGRL
Trigger: GAGACGCCCCCTTTCCGCCCATCTCTTGTCCTGCCG...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGTCTCCCTCCGAGCCATaGCCACATCCTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLGGPGTAPLSAVFLFRESPSEP*PHPPSC
Trigger: GCAGGAAGGAGGATGTGGCCATGGCTCGGAGGGAGA...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGTTCCCCTCGAGGCAGTaGCCTGAGACCCTACACCAC +
Preference number: 4 (lower is better)
Translates to: RLGGPGTAPLSAVFLFREFPSRQ*PETLHH
Trigger: GTGGTGTAGGGTCTCAGGCCACTGCCTCGAGGGGAA...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGTGCACTTTCTTTGTCTaGGGCGCCGGCCCATCGCGC +
Preference number: 4 (lower is better)
Translates to: AKRAGAVVAVARERLAAGCTFFV*GAGPSR
Trigger: GCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCA...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAAGCCCATTGGCTGCCTaGCCCTCCCCCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: FPLPPARCALAAPAAFKKSPLAA*PSPSDC
Trigger: GCAGTCACTGGGGGAGGGCCAGGCAGCCAATGGGCT...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTGGCCCAGATAAGTGGTaGCCCAGGTGGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRGPDKW*PRWGSG
Trigger: CCCGCTCCCCCACCTGGGGCACCACTTATCTGGGCC...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTCAAGCCAGGCAGCTGTaGCCCCAGCCCGTTGGCATA +
Preference number: 4 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTQARQL*PQPVGI
Trigger: TATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTG...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCTGGCTGGCCGCAATaGCGAGCGAAAAGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTAGWPQ*RAKSEQ
Trigger: CTGCTCGCTTTTCGCTCGGCATTGCGGCCAGCCAGC...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AAGAAGAGCAGGAAGAAGATACCGGAGCTGCAGGTCCGCCTCCCGGGGACCGCTCTTCTTCCTCGGTGCTaGGAGGAGTGGGTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: KKSRKKIPELQVRLPGTALLPRC*EEWVAP
Trigger: CGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAG...AGCGGTCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCTTCCTGCTCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGTTTAAATTGTCTTTCTaGAGGTGGGCTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRLALEGALAPPPGKTTEFKLSF*RWAGWG
Trigger: CCCCCAACCAGCCCACCTCCAGAAAGACAATTTAAA...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGTTGCTTCTTCCTCGGTaGTGGGAGGAGTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: AKRAGAVVAVARERLAAGLLLPR*WEEWVA
Trigger: AGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAA...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AAGAAGAGCAGGAAGAAGATACCGGAGCTGCAGGTCCGCCTCCCGGGGACCGCTCCACGTTCTCTGGCATaGCGGTCACCTCGAACACCG +
Preference number: 4 (lower is better)
Translates to: KKSRKKIPELQVRLPGTAPRSLA*RSPRTP
Trigger: CGGTGTTCGAGGTGACCGGCATGCCAGAGAACGTGG...AGCGGTCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCTTCCTGCTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGAGAAGCAGACGAAGATaGAGAAGAAGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRLALEGALAPPPGKTTERSRRR*RRRAGR
Trigger: TCTTCCTGCTCTTCTTCTGCATCTTCGTCTGCTTCT...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTCAGCTGGTGCCAGGGTaGAGCCGGCGGTGCACCAAT +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRQLVPG*SRRCTN
Trigger: ATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTG...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCACTTCCCCCAGCACGGTaGGCACTAGCAGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASLPPAR*ALAAPA
Trigger: AGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAG...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTCTCCTCGACCTACCTTaGCGCCCCACGATCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRLLDLP*RPTISA
Trigger: CGCCGAGATCGTGGGGCGGCAAGGTAGGTCGAGGAG...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp GCCAAGCGAGCTGGAGCTGTCGTTGCGGTAGCTAGAGAAAGGCTTGCGGCCGGGCGGATCTCAGAGTGTTaGTGGGGCCGGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AKRAGAVVAVARERLAAGRISEC*WGREGE
Trigger: TTCTCCTTCCCGGCCCCACCAACACTCTGAGATCCG...CCCGGCCGCAAGCCTTTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTGACCCGCCGGACCCATaGTGCAGATCGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRDPPDP*CRSKPT
Trigger: TGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTC...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp GGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGGCGCGGAGGCTACAGTACTCTTaGTGCAGATATCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGPGTAPLSAVFLFREARRLQYS*CRYPGK
Trigger: TTTGCCAGGATATCTGCATCAAGAGTACTGTAGCCT...CCGCGCCTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGCCCTCCCCCAGTGACTGCAGTCGTCCCGAACCAAACCCGAGAATCCCAGAAAAGTCATCTGGGGAGATaGCGCTGGGATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPPPVTAVVPNQTRESQKSHLGR*RWDPAG
Trigger: CCCAGCTGGATCCCAGCGGCATCTCCCCAGATGACT...TTTCTGGGATTCTCGGGTTTGGTTCGGGACGACTGCAGTCACTGGGGGAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCACCGCTGCGCTGCTGCTaGTCCCGCCGCCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASPLRCC*SRRRNK
Trigger: CTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGG...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTACACGCCCATTATCCTaGGGTAACCGCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRTRPLS*GNRGDR
Trigger: CCGGTCCCCGCGGTTACCCCAGGATAATGGGCGTGT...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAAAGTCTGTGGAAGCACTaGCAAGCGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPLPPARCALAAPAAFKKSLWKH*QASWSC
Trigger: ACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACT...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGCCGCTGCGCTGCTGCTGGTCCCGCCGCCGAAATAAGAGTCTGTGGAAGCACTCTCCGGGAGACAGCCTaGCTGCACTTTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SRCAAAGPAAEIRVCGSTLRETA*LHFLCL
Trigger: CAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAG...AGTGCTTCCACAGACTCTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCAGGGGACCGCTCGAACTaGGCCCAGATAAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASGDRSN*AQISGA
Trigger: GGCACCACTTATCTGGGCCCAGTTCGAGCGGTCCCC...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCGCGATGCCTCAGCGCTaGTCGACTGGGGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPIAMPQR*STGGRG
Trigger: CCCCCTACCCCCAGTCGACCAGCGCTGAGGCATCGC...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAACCCAGAAAAGTCATCTaGGGAGATGCCGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: FPLPPARCALAAPAAFKKPRKVI*GDAAGI
Trigger: GATCCCAGCGGCATCTCCCCAGATGACTTTTCTGGG...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGCGCTGGGTAGCCGCTaGGCTGCTGCTGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCALGSR*AAAGPA
Trigger: GGCGGGACCAGCAGCAGCGCAGCGGCTACCCAGCGC...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCCCCGAGTGCCCGGCTaGCTGGCCGCAATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCPRVPG*LAAMPS
Trigger: GCTCGGCATTGCGGCCAGCCAGCCGGGCACTCGGGG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTACAGGCGCGGGCAGCTaGTGCCAGGGTGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSTGAGS*CQGAAG
Trigger: GCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGT...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCGTAGGGGGTGGGGTGTaGGTCCCGGGACCCATTGTT +
Preference number: 4 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPIVGGGV*VPGPIV
Trigger: AACAATGGGTCCCGGGACTCACACCCCACCCCCTAC...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGCCCCCGGGGCCATGTaGAAGGGTGGAGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQAPGAM*KGGDRR
Trigger: GCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CGCCGCCGAAATAAGAGTCTGTGGAAGCACTGCCAAGCGAGCTGGAGCTGTCGTCGCTCTTCTCACAGATaGGATTGGCGCACTCCATGC +
Preference number: 4 (lower is better)
Translates to: RRRNKSLWKHCQASWSCRRSSHR*DWRTPC
Trigger: GCATGGAGTGCGCCAATCGCATCTGTGAGAAGAGCG...ACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCGGTGCTGGGAGGAGTaGGTCGCTCCGTGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSRCWEE*VAPCGP
Trigger: CGGACCGCACGGAGCGACCCACTCCTCCCAGCACCG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTGCCCCAGGTTGGCGTTaGAGGGCGCACTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSAPGWR*RAHWRH
Trigger: GTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGC...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGTGCGGATGGCCTGAGTaGCCGCGGTGTGGCAGACCG +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQCGWPE*PRCGRP
Trigger: CGGTCTGCCACACCGCGGTCACTCAGGCCATCCGCA...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCGCCGCCGCTGCCGTTaGGCTCCAGGTCTGCGAACA +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQRRRCR*APGLRT
Trigger: TGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCGAAGCCCACATCGGTaGCGTTGGCGTGGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPIRSPHR*RWRGSR
Trigger: ACGACTTCCACGCCAACGGCACCGATGTGGGCTTCG...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGGCCCAGATAAGTGGTaGCCCAGGTGGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQGPDKW*PRWGSG
Trigger: CCCGCTCCCCCACCTGGGGCACCACTTATCTGGGCC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCGGAGCAGTCGCGGCTaGCTTTACGCCGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSRSSRG*LYAEAR
Trigger: CCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCCG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCTTCCCCCAGCACGGTaGGCACTAGCAGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCLPPAR*ALAAPA
Trigger: AGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCAGCTGAAGTCGCGATaGCTCAGCGCTGGTCGACTG +
Preference number: 4 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPIQLKSR*LSAGRL
Trigger: CAGTCGACCAGCGCTGAGGCATCGCGACTTCAGCTG...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCTGCGAACAGCGAGCTaGGCATCGCTCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQLRTAS*ASLGRA
Trigger: CGCACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCCCAGCAGGGAGAGCTaGTCGAGCGCGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCPSRES*SSASCR
Trigger: CCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTGGG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCGTTGGAGGGCGCACTaGCGCCACCCCCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVRWRAH*RHPRGR
Trigger: TCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGAGGCAGGCGAGCGCTaGGGAAAGAGGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCEAGER*GKRVGR
Trigger: CCTCCCCACCCTCTTTCCCCAGCGCTCGCCTGCCTC...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGGGTCAAAAGTGGGCTaGAGCTCGGGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQGSKVG*SSGQPS
Trigger: CGACGGCTGCCCCGAGCTGCAGCCCACTTTTGACCC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCAGCTGGTGCCAGGGTaGAGCCGGCGGTGCACCAAT +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCQLVPG*SRRCTN
Trigger: ATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCGGAGCAGTCGCGGCTaGCTTTACGCCGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVRSSRG*LYAEAR
Trigger: CCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCCG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGAGTGCCCGGCTGGCTaGCCGCAATGCCGAGCGAAA +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQECPAG*PQCRAK
Trigger: TTTCGCTCGGCATTGCGGCCAGCCAGCCGGGCACTC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCCGCTGCGCTGCTGCTaGTCCCGCCGCCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSPLRCC*SRRRNK
Trigger: CTTATTTCGGCGGCGGGACCAGCAGCAGCGCAGCGG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGAGCCGGGTCAAAAGTaGGCTGCAGCTCGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCEPGQK*AAARGS
Trigger: GCTGCCCCGAGCTGCAGCCCACTTTTGACCCGGCTC...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCTGGGCCCAGATAAGTaGTGCCCCAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQLGPDK*CPRWGS
Trigger: GCTCCCCCACCTGGGGCACCACTTATCTGGGCCCAG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTGGCCATGTGCAAGGGTaGAGACAGGCGCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSGHVQG*RQARAA
Trigger: AGCTGCCCGCGCCTGTCTCCACCCTTGCACATGGCC...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTGAGGCAGGCGAGCGCTaGGGAAAGAGGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVEAGER*GKRVGR
Trigger: CCTCCCCACCCTCTTTCCCCAGCGCTCGCCTGCCTC...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCGAGGAACAGCCCATTaGCTGCCTGGCCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCRGTAH*LPGPPP
Trigger: TGGGGGAGGGCCAGGCAGCCAATGGGCTGTTCCTCG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTAAGATGCGGATGGCCTaGGTGACCGCGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSKMRMA*VTAVWQ
Trigger: CTGCCACACCGCGGTCACTCAGGCCATCCGCATCTT...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCGCGGATCCCGATACTaGACACGCCTTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSRGSRY*TRLPLE
Trigger: CTCGAGGGGAAGGCGTGTTCAGTATCGGGATCCGCG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCAAGCCAGGCAGCTGTaGCCCCAGCCCGTTGGCATA +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCQARQL*PQPVGI
Trigger: TATGCCAACGGGCTGGGGGCACAGCTGCCTGGCTTG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTGACGTGTCCGACGGCTaGAAGCCAGGCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVDVSDG*KPGSCA
Trigger: GGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGTC...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTAGACCTGCTGGCGGGTaGGGTGGGGGCAGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVRPAGG*GGGRAL
Trigger: TAGAGCTCTGCCCCCACCCCACCCGCCAGCAGGTCT...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTGTACCCGCACTTGGATaGTGGTCTGCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSVPALG*WSARAG
Trigger: ACCTGCCCGGGCAGACCACCATCCAAGTGCGGGTAC...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTGAGCCGGGTCAAAAGTaGGCTGCAGCTCGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVEPGQK*AAARGS
Trigger: GCTGCCCCGAGCTGCAGCCCACTTTTGACCCGGCTC...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCGGGCGTCTCCCTCACTaGCCTCGGGCCGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTGRLPH*PRAAPR
Trigger: CCGTGGCGCGGCCCGAGGTCAGTGAGGGAGACGCCC...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGAGTGGGTCGCTCCGTaGGGTCCGCACCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQEWVAP*GPHRAV
Trigger: CACTGCCCGGTGCGGACCGCACGGAGCGACCCACTC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCGAAGCCCACATCGGTaGCGTTGGCGTGGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQRSPHR*RWRGSR
Trigger: ACGACTTCCACGCCAACGGCACCGATGTGGGCTTCG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGCTTGCTCCAGAGGCTaGCTGGGCCGGACCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKACSRG*LGRTRR
Trigger: CCGGCGGGTCCGGCCCAGGCAGCCTCTGGAGCAAGC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTAGAAGATACCGGAGCTaGAGGTCCGCCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVRRYRS*RSASRG
Trigger: TCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCT...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGCCCCCGGGGCCATGTaGAAGGGTGGAGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQAPGAM*KGGDRR
Trigger: GCGCCTGTCTCCACCCTTGCACATGGCCCCGGGGGC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCTCCACCCGGGTCGCTaGGCACCCGGCGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKLHPGR*APGEPG
Trigger: ACCTGGCTCGCCGGGTGCGCAGCGACCCGGGTGGAG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTCTTCCTCGGTGCTaGGAGGAGTGGGTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVLLPRC*EEWVAP
Trigger: CGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGTCGCCCGCAGCGCTTTaGTTTTACAACCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQSPAAL*FYNLAA
Trigger: GGCGGCAAGGTTGTAAAATCAAAGCGCTGCGGGCGA...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329713.5
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGAGTGGGTCGCTCCGTaGGGTCCGCACCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKEWVAP*GPHRAV
Trigger: CACTGCCCGGTGCGGACCGCACGGAGCGACCCACTC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTTTGCTTCTTCCTCGGTaGTGGGAGGAGTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCLLLPR*WEEWVA
Trigger: AGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAA...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCACCGCGCCGTTGAGTaGCGTGTTCTTATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSHRAVE*RVLIPG
Trigger: TCCCGGAATAAGAACACGGCACTCAACGGCGCGGTG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCGCGCTGGGTAGCCGCTaGGCTGCTGCTGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTALGSR*AAAGPA
Trigger: GGCGGGACCAGCAGCAGCGCAGCGGCTACCCAGCGC...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGGGAGACAGCCTGCCTaGACTTTCTTTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCGRQPA*TFFVWG
Trigger: GCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCC...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCCCCGAGTGCCCGGCTaGCTGGCCGCAATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTPRVPG*LAAMPS
Trigger: GCTCGGCATTGCGGCCAGCCAGCCGGGCACTCGGGG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCGGTGCTGGGAGGAGTaGGTCGCTCCGTGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKRCWEE*VAPCGP
Trigger: CGGACCGCACGGAGCGACCCACTCCTCCCAGCACCG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCCCAGCAGGGAGAGCTaGTCGAGCGCGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQPSRES*SSASCR
Trigger: CCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTGGG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTCGACATGCTCAGAACTaGGTACTGGCACGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSRHAQN*VLARTR
Trigger: CCGAGTGCGTGCCAGTACCCAGTTCTGAGCATGTCG...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGCGATCCACGTTCTCTaGCATGCCGGTCACCTCGAA +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQAIHVL*HAGHLE
Trigger: TTCGAGGTGACCGGCATGCCAGAGAACGTGGATCGC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTTGTTCACGCTCTTCTTaGGCGGCTCGCTGTCGTACA +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCCSRSS*AARCRT
Trigger: TGTACGACAGCGAGCCGCGCAAGAAGAGCGTGAACA...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGACGTGTCCGACGGCTaGAAGCCAGGCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQDVSDG*KPGSCA
Trigger: GGCACAGCTGCCTGGCTTGCAGCCGTCGGACACGTC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGTTTAGCAGAAGAAAGTaGATCCCGCCAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQFSRRK*IPPGQR
Trigger: CCGCTGCCCTGGCGGGATGCACTTTCTTCTGCTAAA...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCTGCGAACAGCGAGCTaGGCATCGCTCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKLRTAS*ASLGRA
Trigger: CGCACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCGACATGCTCAGAACTaGGTACTGGCACGCACTCGG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVRHAQN*VLARTR
Trigger: CCGAGTGCGTGCCAGTACCCAGTTCTGAGCATGTCG...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGTGCCCCCAGCCCGTTaGCATAAGCGGCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQVPPAR*HKRRRP
Trigger: TGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCAC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCTCGAGGCAGTGGCCTaGGACCCTACACCACCCCCA +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKLEAVA*DPTPPP
Trigger: TGGGGGTGGTGTAGGGTCTCAGGCCACTGCCTCGAG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR TCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTTCGCCCGCAGCGCTTTaGTTTTACAACCTACGAACC +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCSPAAL*FYNLRT
Trigger: GGTTCGTAGGTTGTAAAATCAAAGCGCTGCGGGCGA...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTTGTTCACGCTCTTCTTaGGCGGCTCGCTGTCGTACA +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVCSRSS*AARCRT
Trigger: TGTACGACAGCGAGCCGCGCAAGAAGAGCGTGAACA...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTACGATCTCGGCGACATaGTCAGAACTGGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVTISAT*SELGTG
Trigger: GCCAGTACCCAGTTCTGAGCATGTCGCCGAGATCGT...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTTTGATTTTACAACCTTaGCGCCCCACGATCTCGGCG +
Preference number: 4 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCLILQP*RPTISA
Trigger: CGCCGAGATCGTGGGGCGGCAAGGTTGTAAAATCAA...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329713.5
CDS-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTGTACGCAGAGCAATGTaGGCCTCAATCTCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSVRRAM*ASISSR
Trigger: TCGAGAGGAGATTGAGGCGCACATTGCTCTGCGTAC...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTAGTCTGTGGAAGCACTaGCAAGCGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVSLWKH*QASWSC
Trigger: ACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACT...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTTATTGTTTCCGTTGTaGGCAAAGCTCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSLLFPL*AKLRAG
Trigger: CCCCGCCCTGAGCTTTGCGCACAACGGAAACAATAA...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGGGTGCAGCCGGCGGTaGACCAATAGCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKGCSRR*TNSPRL
Trigger: CAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCTGGGCCCAGATAAGTaGTGCCCCAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKLGPDK*CPRWGS
Trigger: GCTCCCCCACCTGGGGCACCACTTATCTGGGCCCAG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCCAATAGCCCCAGGTTaGCGTTGGAGGGCGCACTGG +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQPIAPG*RWRAHW
Trigger: CCAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGACCCGCCGGACCCATaGTGCAGATCGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKDPPDP*CRSKPT
Trigger: TGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCTCGGGGAAGGCAGCTaGAGTCGCGATGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFLGEGS*SRDASA
Trigger: CGCTGAGGCATCGCGACTTCAGCTGCCTTCCCCGAG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGTTGCGCTCCAGGTCTaGGAACAGCGAGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQVALQV*EQRAGH
Trigger: ATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAAC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTTTATTGTTTCCGTTGTaGGCAAAGCTCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVLLFPL*AKLRAG
Trigger: CCCCGCCCTGAGCTTTGCGCACAACGGAAACAATAA...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCGGGTGCAGCCGGCGGTaGACCAATAGCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFGCSRR*TNSPRL
Trigger: CAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCC...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGGGCTCCATTCCGCTTTaGAGAAATCCAGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQGSIPL*RNPESS
Trigger: GGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCC...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCCCGCACTTGGATGGTaGTCTGCCCGGGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFPALGW*SARAGW
Trigger: CCAACCTGCCCGGGCAGACCACCATCCAAGTGCGGG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGTACCCGCACTTGGATaGTGGTCTGCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKVPALG*WSARAG
Trigger: ACCTGCCCGGGCAGACCACCATCCAAGTGCGGGTAC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGGGGGACCGCTCGAACTaGGCCCAGATAAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKGDRSN*AQISGA
Trigger: GGCACCACTTATCTGGGCCCAGTTCGAGCGGTCCCC...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCGTGCCCCCAGCCCGTTaGCATAAGCGGCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFVPPAR*HKRRRP
Trigger: TGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCAC...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCAAGATGCGGATGGCCTaGGTGACCGCGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFKMRMA*VTAVWQ
Trigger: CTGCCACACCGCGGTCACTCAGGCCATCCGCATCTT...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGTGGTCGAGCGCGAGCTaGAGGGCTCTTTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKWSSAS*RALWSS
Trigger: GGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCA...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGCACTGCCAAGCGAGCTaGAGCTGTCGTTGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKHCQAS*SCRCGS
Trigger: GCTACCGCAACGACAGCTCCAGCTCGCTTGGCAGTG...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCGGATCTCAGAGTGTTaGTGGGGCCGGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQRISEC*WGREGE
Trigger: TTCTCCTTCCCGGCCCCACCAACACTCTGAGATCCG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTTTCACAGGAACTCCTaGCCCTTCCACGAACATTCA +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSFHRNS*PFHEHS
Trigger: TGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTAAAGCTGCAGTATCCTaGTTTCACAGGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQELLALPRTFKKDPLCSKAAVS*FHRNSW
Trigger: CCAGGAGTTCCTGTGAAACCAGGATACTGCAGCTTT...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCAGGCACCGCGCCGTTaGGTGCCGTGTTCTTATTCC +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFQAPRR*VPCSYS
Trigger: GGAATAAGAACACGGCACTCAACGGCGCGGTGCCTG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCTGGTCGAGCGCGAGCTaGAGGGCTCTTTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTWSSAS*RALWSS
Trigger: GGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCA...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCCACGTTCTCTGGCATaGCGGTCACCTCGAACACCG +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFPRSLA*RSPRTP
Trigger: CGGTGTTCGAGGTGACCGGCATGCCAGAGAACGTGG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGAGCTGCAGGGCTCTTTaGTCATCCAGGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKSCRAL*SSRVSP
Trigger: GGGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCT...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCTCTCCCTCCGAGCCATaGCCACATCCTCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTSPSEP*PHPPSC
Trigger: GCAGGAAGGAGGATGTGGCCATGGCTCGGAGGGAGA...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCACTGCCAAGCGAGCTaGAGCTGTCGTTGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFHCQAS*SCRCGS
Trigger: GCTACCGCAACGACAGCTCCAGCTCGCTTGGCAGTG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTAAAGCTGCAGTATCCTaGTTTCACAGGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVKAAVS*FHRNSW
Trigger: CCAGGAGTTCCTGTGAAACCAGGATACTGCAGCTTT...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGTACGCAGAGCAATGTaGGCCTCAATCTCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQVRRAM*ASISSR
Trigger: TCGAGAGGAGATTGAGGCGCACATTGCTCTGCGTAC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCAGCTGCAGGGCTCTTTaGTCATCCAGGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTSCRAL*SSRVSP
Trigger: GGGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCT...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCGCTCTTCTCACAGATaGGATTGGCGCACTCCATGC +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTRSSHR*DWRTPC
Trigger: GCATGGAGTGCGCCAATCGCATCTGTGAGAAGAGCG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGAGAAAATATGCTGGGTaGAGCAGATCTAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: RACISGVQVSQATVLLMQRKYAG*SRSRRF
Trigger: AAATCTTCTAGATCTGCTTCACCCAGCATATTTTCT...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR GCA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGAGAAGCAGACGAAGATaGAGAAGAAGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKRSRRR*RRRAGR
Trigger: TCTTCCTGCTCTTCTTCTGCATCTTCGTCTGCTTCT...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CCA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCTTTCACAGGAACTCCTaGCCCTTCCACGAACATTCA +
Preference number: 4 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTFHRNS*PFHEHS
Trigger: TGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR CAA 72 bp ATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTaGATGCAGATATCCTGGCAAATTCCTTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: ISGVQVSQATVL*MQISWQIPLLK
Trigger: TTTAAGTAAAGGAATTTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR TCA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCAGAAAATATGCTGGGTaGAGCAGATCTAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFRKYAG*SRSRRF
Trigger: AAATCTTCTAGATCTGCTTCACCCAGCATATTTTCT...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
3UTR CAA 72 bp ATAGAAAATATGCTGGGTGAAGCAGATCTAGAAGATTaGTCTGAACCTATAAAATCTCCATCCCAACAGAAT +
Preference number: 4 (lower is better)
Translates to: IENMLGEADLED*SEPIKSPSQQN
Trigger: ATTCTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACCCAGCATATTTTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 90 bp GCTGCTGCCGCCGCCGCCGCCGCCGCTGCCGTTGCGCTCCAGGTCTaGGAACAGCGAGCTGGGCATCGCTCGGCCGTGCGCGCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAAAVALQV*EQRAGHRSAVRAAP
Trigger: GGGCGCGGCGCGCACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 90 bp TCTCTCCCCCTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTGCCGTTaGGCTCCAGGTCTGCGAACAGCGAGCTGGGCATCGCTCGGCCGT +
Preference number: 5 (lower is better)
Translates to: SLPLRCCRRRRRRCR*APGLRTASWASLGR
Trigger: ACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGGGGGAGAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 90 bp CCAGGGTCTCTCCCCCTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTaGCGTTGCGCTCCAGGTCTGCGAACAGCGAGCTGGGCATCGCTC +
Preference number: 5 (lower is better)
Translates to: PGSLPLRCCRRRRRR*RCAPGLRTASWASL
Trigger: GAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGGGGGAGAGACCCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 90 bp GGGGAGGCCGGTCGCCTGCTGAGGGCTCCGTTGCTTCTTCCTCGGTaGTGGGAGGAGTGGGTCGCTCCGTGCGGTCCGCACCGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GEAGRLLRAPLLLPR*WEEWVAPCGPHRAV
Trigger: CACTGCCCGGTGCGGACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCGACCGGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 90 bp TGCATCCCGCCAGGGCAGCGGCGCGGCTCCGGGAGACAGCCTGCCTaGACTTTCTTTGTCTGGGGCGCCGGCCCATCGCGCGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CIPPGQRRGSGRQPA*TFFVWGAGPSRGSS
Trigger: GGAAGAGCCGCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTGCCCTGGCGGGATGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS GCA 90 bp AAAGTGCATCCCGCCAGGGCAGCGGCGCGGCTCCGGGAGACAGCCTaGCTGCACTTTCTTTGTCTGGGGCGCCGGCCCATCGCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KVHPARAAARLRETA*LHFLCLGRRPIARL
Trigger: GAGCCGCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTGCCCTGGCGGGATGCACTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS CCA 90 bp GAGGCCGGTCGCCTGCTGAGGGCTCCGTTGCTTCTTCCTCGGTGCTaGGAGGAGTGGGTCGCTCCGTGCGGTCCGCACCGGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: EAGRLLRAPLLLPRC*EEWVAPCGPHRAVA
Trigger: AGCCACTGCCCGGTGCGGACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCGACCGGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CCA 90 bp CAGCGGCGCGGCTCCGGGAGACAGCCTGCCTGCACTTTCTTTGTCTaGGGCGCCGGCCCATCGCGCGGCTCTTCCTCTCTCCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QRRGSGRQPACTFFV*GAGPSRGSSSLPKA
Trigger: TGCCTTGGGGAGAGAGGAAGAGCCGCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp GGCTGCCTGGGCCGGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGCCTCCTCGACCTACCTaGCCGCCCCACGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: GCLGRTRRTHDADRSPHRPPRPT*PPHDLG
Trigger: GCCGAGATCGTGGGGCGGCAAGGTAGGTCGAGGAGG...CCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGACCAATAGCCCCAGGTaGGCGTTGGAGGGCGCACTG +
Preference number: 5 (lower is better)
Translates to: RLGGPGTAPLSAVFLFRETNSPR*ALEGAL
Trigger: CAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGGT...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS CCA 90 bp TACAGAGAGGCGCCCTCGTCACTGTCCAGCCCCAGCAGGGAGAGCTaGTCGAGCGCGAGCTGCAGGGCTCTTTGGTCATCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: YREAPSSLSSPSRES*SSASCRALWSSRVS
Trigger: AGAGACCCTGGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTGGGGCTGGACAGTGACGAGGGCGCCTCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp TTCCCCCTTCCCCCAGCACGGTGCGCACTAGCAGCGCCCGCTGCCTTTAAGAAATCGGATCTCAGAGTGTaGGTGGGGCCGGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: FPLPPARCALAAPAAFKKSDLRV*VGPGRR
Trigger: TCTCCTTCCCGGCCCCACCAACACTCTGAGATCCGA...TTTCTTAAAGGCAGCGGGCGCTGCTAGTGCGCACCGTGCTGGGGGAAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp CCCAGGTTGGCGTTGGAGGGCGCACTGGCGCCACCCCCGGGGAAGACCACGGAGTACCCATTGCCGTTATaGTTATTGTTTCCGTTGTGC +
Preference number: 5 (lower is better)
Translates to: PRLALEGALAPPPGKTTEYPLPL*LLFPLC
Trigger: GCACAACGGAAACAATAACAATAACGGCAATGGGTA...CTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp GGACCCGCCGGACCCATGATGCAGATCGAAGCCCACATCGGTGCCGTTGGCGTGGGGCTCCATTCCGCTTaGCAGAAATCCAGAATCCTC +
Preference number: 5 (lower is better)
Translates to: GPAGPMMQIEAHIGAVGVGLHSA*QKSRIL
Trigger: GAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCC...CACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCACTGCTGAGGGCTCCGTaGCTTCTTCCTCGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASLLRAP*LLPRCW
Trigger: CCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAG...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp AGGTTGGGCGGCCCAGGCACCGCGCCGTTGAGTGCCGTGTTCTTATTCCGGGAGTTCGCCCGCAGCGCTTaGATTTTACAACCTACGAAC +
Preference number: 5 (lower is better)
Translates to: RLGGPGTAPLSAVFLFREFARSA*ILQPTN
Trigger: GTTCGTAGGTTGTAAAATCAAAGCGCTGCGGGCGAA...CTCCCGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCCGCCGCCGCTGCCGTaGCGCTCCAGGTCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: RACISGVQVSQATVLLMQPPPLP*RSRSAN
Trigger: GTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCTGCCTGCACTTTCTTaGTCTGGGGCGCCGGCCCAT +
Preference number: 5 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPILPALS*SGAPAH
Trigger: ATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAG...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTCCAGGCACCGCGCCGTaGAGTGCCGTGTTCTTATTC +
Preference number: 5 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCPGTAP*SAVFLF
Trigger: GAATAAGAACACGGCACTCAACGGCGCGGTGCCTGG...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp TTCTCGTCTGTGAGCTCAATGATGCCGCCGGTACGCAGAGCAATGTGCGCCTCACAGGCTACAGTACTCTaGATGCAGATATCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: FSSVSSMMPPVRRAMCASQATVL*MQISWQ
Trigger: TTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTG...TGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCCGCCGCCGCTGCCGTaGCGCTCCAGGTCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTPPPLP*RSRSAN
Trigger: GTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGG...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp TGGTTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTATGTTCACGCTCTTCTaGCGCGGCTCGCTGTCGTAC +
Preference number: 5 (lower is better)
Translates to: WFHRNSWPFHEHSKRIHCMFTLF*RGSLSY
Trigger: GTACGACAGCGAGCCGCGCAAGAAGAGCGTGAACAT...ACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGATGTTCACGCTCTTCTaGCGCGGCTCGCTGTCGTAC +
Preference number: 5 (lower is better)
Translates to: RACISGVQVSQATVLLMQMFTLF*RGSLSY
Trigger: GTACGACAGCGAGCCGCGCAAGAAGAGCGTGAACAT...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGAGCCCCAGGTTGGCGTaGGAGGGCGCACTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKSPRLA*EGALAP
Trigger: TGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGCT...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCAGCCCCAGGTTGGCGTaGGAGGGCGCACTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTSPRLA*EGALAP
Trigger: TGGCGCCAGTGCGCCCTCCAACGCCAACCTGGGGCT...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGCTGCTGAGGGCTCCGTaGCTTCTTCCTCGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQLLRAP*LLPRCW
Trigger: CCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAG...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGGAGTCCCGGGACCCATaGTTCCTCCTCTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQESRDP*FLLWAP
Trigger: TGGAGCCCAGAGGAGGAACAATGGGTCCCGGGACTC...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp TTTCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTTTTGATTTTACAACCTaGCCGCCCCACGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: FHRNSWPFHEHSKRIHCVFDFTT*PPHDLG
Trigger: GCCGAGATCGTGGGGCGGCAAGGTTGTAAAATCAAA...AACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329713.5
CDS-3UTR CAA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTTGTTATTGTTTCCGTaGTGCGCAAAGCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SQELLALPRTFKKDPLCSLLLFP*CAKLRA
Trigger: CGCCCTGAGCTTTGCGCACAACGGAAACAATAACAA...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCACCAATAGCCCCAGGTaGGCGTTGGAGGGCGCACTG +
Preference number: 5 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTTNSPR*ALEGAL
Trigger: CAGTGCGCCCTCCAACGCCAACCTGGGGCTATTGGT...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp AGAGCATGCATTTCAGGTGTTCAGGTTTCCCAGGCTACAGTACTCTTGATGCAGCAGGCTACAGTACTCTaGATGCAGATATCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RACISGVQVSQATVLLMQQATVL*MQISWQ
Trigger: TTGCCAGGATATCTGCATCAAGAGTACTGTAGCCTG...CTGCATCAAGAGTACTGTAGCCTGGGAAACCTGAACACCTGAAATGCATGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp TTCCTCCTCTGGGCTCCATTCCGCTTTGCAGAAATCCAGAATCCTCCTCCCATCCATCTTACATTTAAATaGTCTTTCTGGAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: FLLWAPFRFAEIQNPPPIHLTFK*SFWRWA
Trigger: AGCCCACCTCCAGAAAGACAATTTAAATGTAAGATG...GATGGGAGGAGGATTCTGGATTTCTGCAAAGCGGAATGGAGCCCAGAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCGAGCTGCAGGGCTCTTaGGTCATCCAGGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTELQGS*VIQGLS
Trigger: GGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCTC...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCCCAGGCACCGCGCCGTaGAGTGCCGTGTTCTTATTC +
Preference number: 5 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFPGTAP*SAVFLF
Trigger: GAATAAGAACACGGCACTCAACGGCGCGGTGCCTGG...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCTCGGATCTCAGAGTGTaGGTGGGGCCGGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFSDLRV*VGPGRR
Trigger: TCTCCTTCCCGGCCCCACCAACACTCTGAGATCCGA...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp CAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCCACCCACAAAGTTCGCCCGCAGCGCTTaGATTTTACAACCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: QKGSTVFYNKYHRNPPTKFARSA*ILQPCR
Trigger: GCGGCAAGGTTGTAAAATCAAAGCGCTGCGGGCGAA...CTTTGTGGGTGGGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329713.5
CDS-3UTR CAA 90 bp TCACAGGAACTCCTGGCCCTTCCACGAACATTCAAAAAGGATCCACTGTGTTCTTTGCCGTTATTGTTATaGTTTCCGTTGTGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: SQELLALPRTFKKDPLCSLPLLL*FPLCAK
Trigger: CTTTGCGCACAACGGAAACAATAACAATAACGGCAA...AGAACACAGTGGATCCTTTTTGAATGTTCGTGGAAGGGCCAGGAGTTCCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp ATTACTAGAATGTCGCCGTTCCTATTATTTATAGAGCATGCATTTCAGGTGTTCTTGTTATTGTTTCCGTaGTGCGCAAAGCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ITRMSPFLLFIEHAFQVFLLLFP*CAKLRA
Trigger: CGCCCTGAGCTTTGCGCACAACGGAAACAATAACAA...GAACACCTGAAATGCATGCTCTATAAATAATAGGAACGGCGACATTCTAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp GGTGAAGCAGATCTAGAAGATTTGTCTGAACCTATAAAATCTCCATCCCAACAGTACCCATTGCCGTTATaGTTATTGTTTCCGTTGTGC +
Preference number: 5 (lower is better)
Translates to: GEADLEDLSEPIKSPSQQYPLPL*LLFPLC
Trigger: GCACAACGGAAACAATAACAATAACGGCAATGGGTA...CTGTTGGGATGGAGATTTTATAGGTTCAGACAAATCTTCTAGATCTGCTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS-3UTR CAA 90 bp CCACGAACATTCAAAAAGGATCCACTGTGTTCTATAATAAGTATCATAGGAACCTTGCCGTTATTGTTATaGTTTCCGTTGTGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: PRTFKKDPLCSIISIIGTLPLLL*FPLCAK
Trigger: CTTTGCGCACAACGGAAACAATAACAATAACGGCAA...GGTTCCTATGATACTTATTATAGAACACAGTGGATCCTTTTTGAATGTTCGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp GCCGCCGCCGCCGCCGCTGCCGTTGCGCTCCAGGTCTaGGAACAGCGAGCTGGGCATCGCTCGGCCGTGCGC +
Preference number: 6 (lower is better)
Translates to: AAAAAAAVALQV*EQRAGHRSAVR
Trigger: GCGCACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp CTCCCCCTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTaGCGTTGCGCTCCAGGTCTGCGAACAGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPLRCCRRRRRR*RCAPGLRTASW
Trigger: CCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGGGGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CCA 72 bp CGCTGCCGTTGCGCTCCAGGTCTGCGAACAGCGAGCTaGGCATCGCTCGGCCGTGCGCGCCGCGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: RCRCAPGLRTAS*ASLGRARRAPA
Trigger: GGCGGGGGCGCGGCGCGCACGGCCGAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CAA 90 bp GTCTCTCCCCCTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTGCCGTaGCGCTCCAGGTCTGCGAACAGCGAGCTGGGCATCGCTCGGCCG +
Preference number: 6 (lower is better)
Translates to: VSPPPLLPPPPPPLP*RSRSANSELGIARP
Trigger: CGGCCGAGCGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGGGGGAGAGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp CTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTGCCGTTaGGCTCCAGGTCTGCGAACAGCGAGCTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: LRCCRRRRRRCR*APGLRTASWAS
Trigger: CGATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CAA 72 bp CCTCCGCTGCTGCCGCCGCCGCCGCCGCCGCTGCCGTaGCGCTCCAGGTCTGCGAACAGCGAGCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: PPLLPPPPPPLP*RSRSANSELGI
Trigger: GATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp CCAGGGCAGCGGCGCGGCTCCGGGAGACAGCCTGCCTaGACTTTCTTTGTCTGGGGCGCCGGCCCATCGCGC +
Preference number: 6 (lower is better)
Translates to: PGQRRGSGRQPA*TFFVWGAGPSR
Trigger: GCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTGCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS GCA 72 bp CCCGCCAGGGCAGCGGCGCGGCTCCGGGAGACAGCCTaGCTGCACTTTCTTTGTCTGGGGCGCCGGCCCATC +
Preference number: 6 (lower is better)
Translates to: PARAAARLRETA*LHFLCLGRRPI
Trigger: GATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTGCCCTGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS CAA 90 bp CGGGTGGTCAGGGGCGGGGAGGCCGGTCGCCTGCTGAGGGCTCCGTaGCTTCTTCCTCGGTGCTGGGAGGAGTGGGTCGCTCCGTGCGGT +
Preference number: 6 (lower is better)
Translates to: RVVRGGEAGRLLRAP*LLPRCWEEWVAPCG
Trigger: ACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCGACCGGCCTCCCCGCCCCTGACCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CAA 90 bp CAGGGCAGCGGCGCGGCTCCGGGAGACAGCCTGCCTGCACTTTCTTaGTCTGGGGCGCCGGCCCATCGCGCGGCTCTTCCTCTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: QGSGAAPGDSLPALS*SGAPAHRAALPLSP
Trigger: TGGGGAGAGAGGAAGAGCCGCGCGATGGGCCGGCGCCCCAGACAAAGAAAGTGCAGGCAGGCTGTCTCCCGGAGCCGCGCCGCTGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558133.1
CDS CCA 72 bp CGCCTGCTGAGGGCTCCGTTGCTTCTTCCTCGGTGCTaGGAGGAGTGGGTCGCTCCGTGCGGTCCGCACCGG +
Preference number: 6 (lower is better)
Translates to: RLLRAPLLLPRC*EEWVAPCGPHR
Trigger: CCGGTGCGGACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CAA 72 bp AGGGGCGGGGAGGCCGGTCGCCTGCTGAGGGCTCCGTaGCTTCTTCCTCGGTGCTGGGAGGAGTGGGTCGCT +
Preference number: 6 (lower is better)
Translates to: RGGEAGRLLRAP*LLPRCWEEWVA
Trigger: AGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCGACCGGCCTCCCCGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp GGTCGCCTGCTGAGGGCTCCGTTGCTTCTTCCTCGGTaGTGGGAGGAGTGGGTCGCTCCGTGCGGTCCGCAC +
Preference number: 6 (lower is better)
Translates to: GRLLRAPLLLPR*WEEWVAPCGPH
Trigger: GTGCGGACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCTCAGCAGGCGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CCA 72 bp AGGGCTCCGTTGCTTCTTCCTCGGTGCTGGGAGGAGTaGGTCGCTCCGTGCGGTCCGCACCGGGCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: RAPLLLPRCWEE*VAPCGPHRAVA
Trigger: AGCCACTGCCCGGTGCGGACCGCACGGAGCGACCCACTCCTCCCAGCACCGAGGAAGAAGCAACGGAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CCA 72 bp AGGGAGAGCTGGTCGAGCGCGAGCTGCAGGGCTCTTTaGTCATCCAGGGTCTCTCCCCCTCCGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: RESWSSASCRAL*SSRVSPPPLLP
Trigger: CGGCAGCAGCGGAGGGGGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAGCTCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS CCA 72 bp GCGCCCTCGTCACTGTCCAGCCCCAGCAGGGAGAGCTaGTCGAGCGCGAGCTGCAGGGCTCTTTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: APSSLSSPSRES*SSASCRALWSS
Trigger: GGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTGGGGCTGGACAGTGACGAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1
CDS GCA 72 bp TCCAGCCCCAGCAGGGAGAGCTGGTCGAGCGCGAGCTaGAGGGCTCTTTGGTCATCCAGGGTCTCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: SSPSRESWSSAS*RALWSSRVSPP
Trigger: AGGGGGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTGGGGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329713.5
ENST00000558133.1