RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEX3A (Homo sapiens)

Ensembl gene IDs: ENSG00000254726

Ensembl transcript IDs: ENST00000442784.1, ENST00000532414.3

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCACCTGCTCCATCCAGGAAGAATGGGACTCTGGAGCTTTAAGTaGTCGGGTGATCACTCAGAACAGTCCCACCCCACTATTTACAAG +
Preference number: 1 (lower is better)
Translates to: LHLLHPGRMGLWSFK*SGDHSEQSHPTIYK
Trigger: CTTGTAAATAGTGGGGTGGGACTGTTCTGAGTGATCACCCGAGCACTTAAAGCTCCAGAGTCCCATTCTTCCTGGATGGAGCAGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CCA 90 bp AGGACTCCTCTCCAGATTCCTCTAGCCCAGCTTTGTGGGGACAGATaGCTTCTGAGCCTTTCAGCCACAGAAACGATTGACATGCTTCTC +
Preference number: 1 (lower is better)
Translates to: RTPLQIPLAQLCGDR*LLSLSATETIDMLL
Trigger: GAGAAGCATGTCAATCGTTTCTGTGGCTGAAAGGCTCAGAAGCCATCTGTCCCCACAAAGCTGGGCTAGAGGAATCTGGAGAGGAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR GCA 90 bp TTTGAAATCTTTTTCCTTGGTGGATTTGTACGTGTCTTCACTAGATaGCTCAAATTAAGTCTGACCACAATCCTACTCTACTTTCTACAG +
Preference number: 1 (lower is better)
Translates to: FEIFFLGGFVRVFTR*LKLSLTTILLYFLQ
Trigger: CTGTAGAAAGTAGAGTAGGATTGTGGTCAGACTTAATTTGAGGCATCTAGTGAAGACACGTACAAATCCACCAAGGAAAAAGATTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTGGGAGGGTTTGAGCTaGGAGCCCCAGGAGGGGACA +
Preference number: 2 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYWEGLS*EPQEGT
Trigger: TGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCCCA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCCTCCTCACTTGCCCCTaGGACAGGGCAGGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGLLTCP*DRAGES
Trigger: ACTTTCCCCTGCCCTGTCGCAGGGGCAAGTGAGGAG...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTGTGGGCCCAGTGGAGTaGGCCCCGGAGGCATGGGGC +
Preference number: 2 (lower is better)
Translates to: RASISKHLAPQITAFQKAVGPVE*APEAWG
Trigger: GCCCCATGCCTCCGGGGCCCACTCCACTGGGCCCAC...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGAGTCGGGCACTGCATaGGAGGAGCAGCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGESGTA*EEQLFP
Trigger: AGGGAAGAGCTGCTCCTCCCATGCAGTGCCCGACTC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACGCAGGTGAATGTGCTTaGCCTCCTCTGCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYAGECA*PPLLPP
Trigger: TGGGGGCAGCAGAGGAGGCCAAGCACATTCACCTGC...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACAGGGAGTCGGGCACTaGATGGGAGGAGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPQGVGH*MGGAAL
Trigger: AAGAGCTGCTCCTCCCATGCAGTGCCCGACTCCCTG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACAGCCTCTGTGCCCATaGGGATGCCTTTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPQPLCP*GCLSPR
Trigger: CCTGGGAGAAAGGCATCCCCATGGGCACAGAGGCTG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAACCAGTCTCTCCTCCTaGCTCACGCCCTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPTSLSS*LTPFPA
Trigger: AGCAGGAAAGGGCGTGAGGCAGGAGGAGAGACTGGT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACACCCAAAGTCCCTGTaGCTTTCCCCAGCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPHPKSL*LSPASV
Trigger: CACAGAGGCTGGGGAAAGGCACAGGGACTTTGGGTG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTACACAGCGGGGGAGGTaGGCAGAGGGCGTCAGAATG +
Preference number: 2 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPTQRGR*AEGVRM
Trigger: CATTCTGACGCCCTCTGCCCACCTCCCCCGCTGTGT...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCATTGGGCAACTCAGGGTaGACTCAGCCACTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPLGNSG*TQPLPS
Trigger: GGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAA...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCAGACAGAGCTGGGAGTaGCAGCCACCAAAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGRQSWE*QPPKES
Trigger: GCTTTCTTTTGGTGGCTGTCACTCCCAGCTCTGTCT...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTCCCCCAGTCCTGCTTTaGCCCAGGCTGACCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPPPVLL*PRLTPL
Trigger: AAGAGGGGTCAGCCTGGGGCAAAGCAGGACTGGGGG...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACTCTGCACCTCCACCTaGTCCATCCAGGAAGAATGG +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPLCTST*SIQEEW
Trigger: CCATTCTTCCTGGATGGAGCAGGTGGAGGTGCAGAG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTCTAGCCCAGCTTTGTaGGGACAGATGGCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYSSPAL*GQMASE
Trigger: CTCAGAAGCCATCTGTCCCCACAAAGCTGGGCTAGA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTAGGAGGGTGGAGAGCTaGTGGCAGCCCCAAATGAGC +
Preference number: 2 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPRRVES*WQPQMS
Trigger: GCTCATTTGGGGCTGCCACCAGCTCTCCACCCTCCT...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTGGTGGCAGCCCCAAATaGGCAGGAGGGAAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPGGSPK*AGGKQQ
Trigger: TTGCTGCTTCCCTCCTGCTCATTTGGGGCTGCCACC...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGAGGGTGGAGAGCTGGTaGCAGCCCCAAATGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGRVESW*QPQMSR
Trigger: CCTGCTCATTTGGGGCTGCCACCAGCTCTCCACCCT...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCACTGCTGGAAACTGGTaGCAGTTTCCCAAACAGGAT +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGTAGNW*QFPKQD
Trigger: ATCCTGTTTGGGAAACTGTCACCAGTTTCCAGCAGT...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGAGGAGTCCATGGAGTaGAATCCAATCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGEESME*NPIYWK
Trigger: CTTCCAGTAGATTGGATTTCACTCCATGGACTCCTC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACAGCCCCTGTCTTATTaGGATGATCAGTGTGCATCC +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPQPLSY*DDQCAS
Trigger: GGATGCACACTGATCATCTCAATAAGACAGGGGCTG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTAGGCTGACCCCTCTTTaGAGACCTGGCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPRLTPL*RPGFSS
Trigger: TGAGGAGAAGCCAGGTCTTCAAAGAGGGGTCAGCCT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGTTTCCCCAGCCTCTGTaGCCATGGGGATGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGFPQPL*PWGCLS
Trigger: AGAAAGGCATCCCCATGGGCACAGAGGCTGGGGAAA...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAACTCCCTTACACTGCTaGAAACTGGTGACAGTTTCC +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPTPLHC*KLVTVS
Trigger: GGAAACTGTCACCAGTTTCCAGCAGTGTAAGGGAGT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTCTTTGTGGGGACAGATaGCTTCTGAGCCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPLCGDR*LLSLSA
Trigger: GGCTGAAAGGCTCAGAAGCCATCTGTCCCCACAAAG...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACTCAACCACATCAGGTaGGACACAGACTCCATGATT +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPLNHIR*DTDSMI
Trigger: AATCATGGAGTCTGTGTCCCACCTGATGTGGTTGAG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTCCATCCAGGAAGAATaGGACTCTGGAGCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYSIQEE*DSGALS
Trigger: ACTTAAAGCTCCAGAGTCCCATTCTTCCTGGATGGA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACAGTCTTCTGCCTTTGTaGGTAAAGAGTGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDSLLPL*VKSGEG
Trigger: CCCCTCTCCACTCTTTACCCACAAAGGCAGAAGACT...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTTTTATACATTCTACTaGACCCAGGGGCCCTCAATG +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGFYTFY*TQGPSM
Trigger: CATTGAGGGCCCCTGGGTCCAGTAGAATGTATAAAA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGGTGACCAGAGGCTCTaGAAGTGGCGCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVGDQRL*KWRTLQ
Trigger: CTGGAGGGTGCGCCACTTTCAGAGCCTCTGGTCACC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACCCAACTCCCTTACACTaGTGGAAACTGGTGACAGTT +
Preference number: 2 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDPTPLH*WKLVTV
Trigger: AACTGTCACCAGTTTCCAGCAGTGTAAGGGAGTTGG...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCCAGGGTGGGCCCAGTaGAGTGGGCCCCGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVPGWAQ*SGPRRH
Trigger: ATGCCTCCGGGGCCCACTCCACTGGGCCCACCCTGG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTTTTACAAGGATCTCCTaGGACTCCCATCCCTCCATC +
Preference number: 2 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPFTRIS*DSHPSI
Trigger: GATGGAGGGATGGGAGTCCCAGGAGATCCTTGTAAA...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGGGAGGAGGAGTCCATaGAGTGAAATCCAATCTACT +
Preference number: 2 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDGRRSP*SEIQST
Trigger: AGTAGATTGGATTTCACTCCATGGACTCCTCCTCCC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGTACCACATTGGAGTATaGGCTGCCCAGGTACTAGGG +
Preference number: 2 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGYHIGV*AAQVLG
Trigger: CCCTAGTACCTGGGCAGCCCATACTCCAATGTGGTA...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAATGCCTGAAGAGGAATaGAGGGACCATCCAAATATT +
Preference number: 2 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPMPEEE*RDHPNI
Trigger: AATATTTGGATGGTCCCTCCATTCCTCTTCAGGCAT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGGTGCCCATTTGGTTTaGTTTCTATTGTACAGACAT +
Preference number: 2 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGGAHLV*FLLYRH
Trigger: ATGTCTGTACAATAGAAACCAAACCAAATGGGCACC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACCACCCCTCCCTGGCTaGTGTTCTGGAGGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLPPLPG*CSGGEG
Trigger: GCCTTCCCCTCCAGAACACCAGCCAGGGAGGGGTGG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 90 bp ATAAGGATTCAAGCTAATAAGGATTCAATAAAGGTTCAGGTCAGGTaGAGAGGGGTGCAGGGAGTCGGGCACTGCATGGGAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: IRIQANKDSIKVQVR*RGVQGVGHCMGGAA
Trigger: AGCTGCTCCTCCCATGCAGTGCCCGACTCCCTGCACCCCTCTCAACCTGACCTGAACCTTTATTGAATCCTTATTAGCTTGAATCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTCTTTCCAGGACAGGGTaGCCAGAGGCTCTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVLSRTG*PEALKV
Trigger: CACTTTCAGAGCCTCTGGTCACCCTGTCCTGGAAAG...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGATTTAAGGGTGTGTTaGGGTATCAGAGTTGTAACT +
Preference number: 2 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDDLRVC*GIRVVT
Trigger: AGTTACAACTCTGATACCTCAACACACCCTTAAATC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGATGTGTGTCTGTTTGTaGAATGACTTCCCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGMCVCL*NDFPGS
Trigger: AGAGCCTGGGAAGTCATTCCACAAACAGACACACAT...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 90 bp CCACCAAAAGAAAGCAAAGCAAAGAGCTGGAGGGAAAGGAAAGAGTaGAGGAAAGGGAAGATCCCAAAGGAAGGGAAGATAGGCGGAGAG +
Preference number: 2 (lower is better)
Translates to: PPKESKAKSWRERKE*RKGKIPKEGKIGGE
Trigger: CTCTCCGCCTATCTTCCCTTCCTTTGGGATCTTCCCTTTCCTCAACTCTTTCCTTTCCCTCCAGCTCTTTGCTTTGCTTTCTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGCCTCCAGATGCCTaGAGAGGAATGGAGGGACCA +
Preference number: 2 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVGPPDA*RGMEGP
Trigger: TGGTCCCTCCATTCCTCTTCAGGCATCTGGAGGCCC...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGAAGAAGGGGTGGAGTaGCACACAGCGGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: FMRQESTLQVGEERVSFKEEGVE*HTAGEV
Trigger: CACCTCCCCCGCTGTGTGTCACTCCACCCCTTCTTC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACAGAGGGCGTCAGAATaGCTTAGTGGCCACCTCTGG +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLQRASE*LSGHLW
Trigger: CCAGAGGTGGCCACTAAGGCATTCTGACGCCCTCTG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGGAGGAAATCCCCTCTaGACCTCCACCTGCTCCATC +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLGGNPL*TSTCSI
Trigger: GATGGAGCAGGTGGAGGTGCAGAGGGGATTTCCTCC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAACCTCGGAAGAAGGGGTaGAGTGACACACAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: FMRQESTLQVGEERVSFKPRKKG*SDTQRG
Trigger: CCCCCGCTGTGTGTCACTCCACCCCTTCTTCCGAGG...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTATTCTCCCCAGAAGGATaGTGTCCCCAAAGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLFSPEG*CPQSWA
Trigger: AGCCCAGCTTTGGGGACACCATCCTTCTGGGGAGAA...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 90 bp GTCGCCTGTCTCGCTCCCTCTCATGCTCTCTTTCTCTCCTCTATTTaGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: VACLAPSHALFLSSI*SLTIRVLCLFLGLA
Trigger: AGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAATAGAGGAGAGAAAGAGAGCATGAGAGGGAGCGAGACAGGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 90 bp CTGGCTTCTCCTCAACCACATCAGGTGGGACACAGACTCCATGATTaGCATGGAGGATTCAAGCTAATAAGGATTCAAGCTAATAAGGAT +
Preference number: 2 (lower is better)
Translates to: LASPQPHQVGHRLHD*HGGFKLIRIQANKD
Trigger: ATCCTTATTAGCTTGAATCCTTATTAGCTTGAATCCTCCATGCAAATCATGGAGTCTGTGTCCCACCTGATGTGGTTGAGGAGAAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGAGAGGGCCTCCAGATaGCTGAAGAGGAATGGAGGG +
Preference number: 2 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLERASR*LKRNGG
Trigger: CCCTCCATTCCTCTTCAGGCATCTGGAGGCCCTCTC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTATTTGAGATGTTTCTTTaGAGGAGTGGGGGAGAGGGC +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLFEMFL*RSGGEG
Trigger: GCCCTCTCCCCCACTCCTCCAAAGAAACATCTCAAA...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGGGACAGATGGCTTCTaGGCCTTTCAGCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: FMRQESTLQVGEERVSFKGTDGF*AFQPQK
Trigger: TTTCTGTGGCTGAAAGGCTCAGAAGCCATCTGTCCC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAATGAAGGTGGGGGTTTaGCCCTTTACCCCAGTATTA +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLMKVGV*PFTPVL
Trigger: TAATACTGGGGTAAAGGGTCAAACCCCCACCTTCAT...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCAGAAACGATTGACATaGTTCTCTCCCCAACCCCTA +
Preference number: 2 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVQKRLT*FSPQPL
Trigger: TAGGGGTTGGGGAGAGAAGCATGTCAATCGTTTCTG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACCGAGGGTGCCCATTTaGTTTGGTTTCTATTGTACA +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLPRVPI*FGFYCT
Trigger: TGTACAATAGAAACCAAACCAAATGGGCACCCTCGG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR TCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGGGACACAGACTCCATaGTTTGCATGGAGGATTCAA +
Preference number: 2 (lower is better)
Translates to: FMRQESTLQVGEERVSFKGTQTP*FAWRIQ
Trigger: TTGAATCCTCCATGCAAATCATGGAGTCTGTGTCCC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAATCTCGCTCCCTCTCATaGTCTCTTTCTCTCCTCTAT +
Preference number: 2 (lower is better)
Translates to: FMRQESTLQVGEERVSFKSRSLS*SLSLLY
Trigger: ATAGAGGAGAGAAAGAGAGCATGAGAGGGAGCGAGA...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACTTAGTGGCCACCTCTaGCAAAACAAAAGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLLSGHL*QNKSFS
Trigger: AGAGAAACTTTTGTTTTGCCAGAGGTGGCCACTAAG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR GCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGCTCTGGAGCTTTAAGTaGTCGGGTGATCACTCAGAA +
Preference number: 2 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLLWSFK*SGDHSE
Trigger: TTCTGAGTGATCACCCGAGCACTTAAAGCTCCAGAG...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 90 bp GGAAGTCCTTCTTGGAATCTAACTTTTATGAGACAAGAAAGCACTTaGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGAACAATTACTG +
Preference number: 2 (lower is better)
Translates to: GSPSWNLTFMRQEST*QVGEERVSFKEQLL
Trigger: CAGTAATTGTTCTTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAAAGTTAGATTCCAAGAAGGACTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCATCCCTCCATCCTCTCTaGGCCCGGCCAGCGGAACCA +
Preference number: 3 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPSLHPL*ARPAEP
Trigger: TGGTTCCGCTGGCCGGGCCAAGAGAGGATGGAGGGA...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR TCA 72 bp TCTTTGGAGGAGTGGGGGAGAGGGCCTCCAGATGCCTaGAGAGGAATGGAGGGACCATCCAAATATTCCTCC +
Preference number: 3 (lower is better)
Translates to: SLEEWGRGPPDA*RGMEGPSKYSS
Trigger: GGAGGAATATTTGGATGGTCCCTCCATTCCTCTTCAGGCATCTGGAGGCCCTCTCCCCCACTCCTCCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CCA 72 bp AGTGGGGGAGAGGGCCTCCAGATGCCTGAAGAGGAATaGAGGGACCATCCAAATATTCCTCCCCCTACTTCT +
Preference number: 3 (lower is better)
Translates to: SGGEGLQMPEEE*RDHPNIPPPTS
Trigger: AGAAGTAGGGGGAGGAATATTTGGATGGTCCCTCCATTCCTCTTCAGGCATCTGGAGGCCCTCTCCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR GCA 72 bp CTCCATCCAGGAAGAATGGGACTCTGGAGCTTTAAGTaGTCGGGTGATCACTCAGAACAGTCCCACCCCACT +
Preference number: 3 (lower is better)
Translates to: LHPGRMGLWSFK*SGDHSEQSHPT
Trigger: AGTGGGGTGGGACTGTTCTGAGTGATCACCCGAGCACTTAAAGCTCCAGAGTCCCATTCTTCCTGGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTGTTTGTTTCTAGGTTaGGCTCAATTGGTAAGGGTG +
Preference number: 3 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGCLFLG*AQLVRV
Trigger: CACCCTTACCAATTGAGCCAAACCTAGAAACAAACA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR TCA 72 bp TCTGCTGCCCCCAACCCAGCCCCTGTCTTATTGAGATaGTCAGTGTGCATCCTTTCCAAGACCCTGGGAAAT +
Preference number: 3 (lower is better)
Translates to: SAAPNPAPVLLR*SVCILSKTLGN
Trigger: ATTTCCCAGGGTCTTGGAAAGGATGCACACTGATCATCTCAATAAGACAGGGGCTGGGTTGGGGGCAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CCA 72 bp CTAGGACAAAAAGAGCAGGGGGAATCTGTCCCTAGGTaGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGT +
Preference number: 3 (lower is better)
Translates to: LGQKEQGESVPR*GEKSKLGRGRC
Trigger: ACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAGATTCCCCCTGCTCTTTTTGTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACAGATTTAAGGGTGTGTaGAGGTATCAGAGTTGTAAC +
Preference number: 3 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDRFKGV*RYQSCN
Trigger: GTTACAACTCTGATACCTCAACACACCCTTAAATCT...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAACACAGGGCAGTTTTCTaGGCTGTGACCTCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: FMRQESTLQVGEERVSFKHRAVF*AVTSFP
Trigger: GGGGAAGGAGGTCACAGCCAAGAAAACTGCCCTGTG...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGTATCTCTAAGCACCTaGCCCCTCAAATCACCGCTT +
Preference number: 3 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVVSLST*PLKSPL
Trigger: AAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATAC...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR TCA 72 bp TTCTCCTCAACCACATCAGGTGGGACACAGACTCCATaGTTTGCATGGAGGATTCAAGCTAATAAGGATTCA +
Preference number: 3 (lower is better)
Translates to: FSSTTSGGTQTP*FAWRIQANKDS
Trigger: TGAATCCTTATTAGCTTGAATCCTCCATGCAAATCATGGAGTCTGTGTCCCACCTGATGTGGTTGAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR GCA 72 bp TATGCAACTTCTGATAGGACTCCAACTCCCTTACACTaGTGGAAACTGGTGACAGTTTCCCAAACAGGATAT +
Preference number: 3 (lower is better)
Translates to: YATSDRTPTPLH*WKLVTVSQTGY
Trigger: ATATCCTGTTTGGGAAACTGTCACCAGTTTCCAGCAGTGTAAGGGAGTTGGAGTCCTATCAGAAGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAAACAGTCTTCTGCCTTaGTGGGTAAAGAGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: FMRQESTLQVGEERVSFKNSLLP*WVKSGE
Trigger: CTCTCCACTCTTTACCCACAAAGGCAGAAGACTGTT...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR GCA 72 bp TTTTTCCTTGGTGGATTTGTACGTGTCTTCACTAGATaGCTCAAATTAAGTCTGACCACAATCCTACTCTAC +
Preference number: 3 (lower is better)
Translates to: FFLGGFVRVFTR*LKLSLTTILLY
Trigger: GTAGAGTAGGATTGTGGTCAGACTTAATTTGAGGCATCTAGTGAAGACACGTACAAATCCACCAAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR-3UTR CAA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAATTCGTGTTTTGTGTTaGTTTCTAGGTTTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLIRVLC*FLGLAQ
Trigger: TTGAGCCAAACCTAGAAACAAACACAAAACACGAAT...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR TCA 72 bp ATGATCAGTGTGCATCCTTTCCAAGACCCTGGGAAATaGACCCCTCATTTCTTTGTCCTACAATTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: MISVHPFQDPGK*TPHFFVLQFKN
Trigger: ATTTTTAAATTGTAGGACAAAGAAATGAGGGGTTCATTTCCCAGGGTCTTGGAAAGGATGCACACTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGCCCAGCGCGGGCCTTaGCGGAAGAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPAQRGP*RKRRRR
Trigger: CCTCCTCCTCCTCTTCCGCCAAGGCCCGCGCTGGGC...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCATGGGCCCCGGAGGCATaGGGCACGGGGCTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPWAPEA*GTGLRR
Trigger: TCTCCTAAGCCCCGTGCCCCATGCCTCCGGGGCCCA...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAACCCGCACCCTCGAGTaGGGAAGGGGAAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPTRTLE*GRGSPP
Trigger: GGGAGGGCTTCCCCTTCCCCACTCGAGGGTGCGGGT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTGTTCTGCCGGAAGGTaGAGAGGGGCTTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYCSAGR*RGACSR
Trigger: CCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACCTGCTCACCCAGGCGTaGGGCCTCAAAGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYLLTQA*GLKARV
Trigger: GACTCTGGCTTTGAGGCCCCACGCCTGGGTGAGCAG...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTGCACGGAGGTGGGCGTaGCGTTCTCCTGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPARRWA*RSPGPP
Trigger: GGGCGGGCCAGGAGAACGCCACGCCCACCTCCGTGC...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTCCAGGGTGGGCCCAGTaGAGTGGGCCCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPPGWAQ*SGPRRH
Trigger: ATGCCTCCGGGGCCCACTCCACTGGGCCCACCCTGG...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTGGGAGGGTTTGAGCTaGGAGCCCCAGGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGWEGLS*EPQEGT
Trigger: TGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCCCA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGCTCCGCTGCTGAGATaGTTTCCCGCCGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDAPLLR*FPAGLW
Trigger: CCACAGCCCGGCGGGAAATCATCTCAGCAGCGGAGC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCATCTCAAAGCAGACCATaGAATCCCGCCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPSQSRP*NPARRR
Trigger: CCGGCGGCGGGCGGGATTGCATGGTCTGCTTTGAGA...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCAGGGTGGAGAGCTGGTaGCAGCCCCAAATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGRVESW*QPQMSR
Trigger: CCTGCTCATTTGGGGCTGCCACCAGCTCTCCACCCT...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTACCAAAGGCGGCGCCTaGCTTGTTGCGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPTKGGA*LVAGGT
Trigger: CGTGCCTCCCGCAACAAGTCAGGCGCCGCCTTTGGT...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTGCTTTGCCCCAGGCTaGCCCCTCTTTGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYCFAPG*PLFEDL
Trigger: CAGGTCTTCAAAGAGGGGTCAGCCTGGGGCAAAGCA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACGAGGATCTTGCCAGTaGGCACCGCGATGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPRGSCQ*APRCAS
Trigger: AGACGCACATCGCGGTGCGCACTGGCAAGATCCTCG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGGCGGCTATCGATTGCTaGGTCGGGGCTCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGAAIDC*VGAPRQ
Trigger: CTGGCGGGGAGCCCCGACGCAGCAATCGATAGCCGC...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTTTGCAGCCGGGCTGGTaGACCCGCCAGGCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKALQPGW*TRQASE
Trigger: CTCCGACGCCTGGCGGGTGCACCAGCCCGGCTGCAA...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACCCCCCAGTCCTGCTTTaGCCCAGGCTGACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDPPVLL*PRLTPL
Trigger: AAGAGGGGTCAGCCTGGGGCAAAGCAGGACTGGGGG...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACTCCTCACTTGCCCCTaGGACAGGGCAGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPLLTCP*DRAGES
Trigger: ACTTTCCCCTGCCCTGTCGCAGGGGCAAGTGAGGAG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACAGAAGAGCACGGAGGTaGGCGTGGCGTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDRRARR*AWRSPG
Trigger: GCCAGGAGAACGCCACGCCCACCTCCGTGCTCTTCT...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGGTGGCAGCCCCAAATaGGCAGGAGGGAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDGGSPK*AGGKQQ
Trigger: TTGCTGCTTCCCTCCTGCTCATTTGGGGCTGCCACC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGCTCCGCACTCGCCGATaGAGCCCAGGCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGLRTRR*SPGCSA
Trigger: GGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAG...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACCGTCCTCTCGCAGATaGGTACTGCACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPPSSRR*VLHTPC
Trigger: GCATGGAGTGTGCAGTACGCATCTGCGAGAGGACGG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTTTCCCCAGCCTCTGTaGCCATGGGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGFPQPL*PWGCLS
Trigger: AGAAAGGCATCCCCATGGGCACAGAGGCTGGGGAAA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACGGGAACACACTCCGTaGTGTTGCTGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPREHTP*CCCCPS
Trigger: TGAAGGGCAGCAGCAACACCACGGAGTGTGTTCCCG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGGTCGCCCTGTCACCATaGACACTGGTTCCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGVALSP*TLVPRP
Trigger: GGGGCGAGGAACCAGTGTTCATGGTGACAGGGCGAC...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTCGCCTCAGTGCTCTTaGAGCTCTGAAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGSPQCS*SSEGEK
Trigger: CTTCTCACCTTCAGAGCTTCAAGAGCACTGAGGCGA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACAGCCCAGGCTGTTCTaGCGGAAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPQPRLF*RKVERG
Trigger: GCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCCCTCCATCCTCTCTTaGCCCGGCCAGCGGAACCAG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKAPSILS*PGQRNQ
Trigger: CTGGTTCCGCTGGCCGGGCCAAGAGAGGATGGAGGG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGGACATACCACATTaGAGTATGGGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPGDIPH*SMGCPG
Trigger: ACCTGGGCAGCCCATACTCCAATGTGGTATGTCCCC...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCCCAGGGTACAGTAGATaGCCCCTACCTGAACACATA +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGPGYSR*PLPEHI
Trigger: TATGTGTTCAGGTAGGGGTCATCTACTGTACCCTGG...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTACTCCGTGGTGTTGCTaGTGCCCTTCAGGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPTPWCC*CPSGAA
Trigger: AGCTGCGCCTGAAGGGCAGCAGCAACACCACGGAGT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGCAGGGAGTCGGGCACTaGATGGGAGGAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGQGVGH*MGGAAL
Trigger: AAGAGCTGCTCCTCCCATGCAGTGCCCGACTCCCTG...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTACGCTCCACGTTGCCTaGGGCACCCGTGATCTCGAA +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPTLHVA*GTRDLE
Trigger: TTCGAGATCACGGGTGCCCCAGGCAACGTGGAGCGT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCATGGCGAAACAAAAGCTaGGGGAGAGAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPWRNKS*GRERGR
Trigger: TCTCCCTCTCTCTCTCCCCCAGCTTTTGTTTCGCCA...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTACACAGCGGGGGAGGTaGGCAGAGGGCGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKATQRGR*AEGVRM
Trigger: CATTCTGACGCCCTCTGCCCACCTCCCCCGCTGTGT...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTTTGAGATGTTTCTTTaGAGGAGTGGGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGFEMFL*RSGGEG
Trigger: GCCCTCTCCCCCACTCCTCCAAAGAAACATCTCAAA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTGAGTCGGGCACTGCATaGGAGGAGCAGCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPESGTA*EEQLFP
Trigger: AGGGAAGAGCTGCTCCTCCCATGCAGTGCCCGACTC...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCCAAGACCCTGGGAAATaGACCCCTCATTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGQDPGK*TPHFFV
Trigger: GACAAAGAAATGAGGGGTTCATTTCCCAGGGTCTTG...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTTGTACTCGAGGATCTTaGCAGTGCGCACCGCGATGT +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPCTRGS*QCAPRC
Trigger: ACATCGCGGTGCGCACTGGCAAGATCCTCGAGTACA...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTTGTCACCATGAACACTaGTTCCTCGCCCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPCHHEH*FLAPHR
Trigger: CCGGTGAGGGGCGAGGAACCAGTGTTCATGGTGACA...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGCACCCGCACACGGATaGTCACCTGGCCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVAPAHG*SPGRAE
Trigger: CTCTGCCCGGCCAGGTGACCATCCGTGTGCGGGTGC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCAGCCTCTGTGCCCATaGGGATGCCTTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKAQPLCP*GCLSPR
Trigger: CCTGGGAGAAAGGCATCCCCATGGGCACAGAGGCTG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGAATCTGTCCCTAGGTaGGGCGAGAAGAGTAAATTG +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGESVPR*GEKSKL
Trigger: CAATTTACTCTTCTCGCCCCACCTAGGGACAGATTC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTCCCTCACCGGTGTCTTaGTGTAGGTGTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPPSPVS*CRCWSW
Trigger: CCAAGACCAACACCTACATCAAGACACCGGTGAGGG...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAACTGCTGGAAACTGGTaGCAGTTTCCCAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPTAGNW*QFPKQD
Trigger: ATCCTGTTTGGGAAACTGTCACCAGTTTCCAGCAGT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGTAGCGGCTATCGATTaGTGCGTCGGGGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVVAAID*CVGAPR
Trigger: GCGGGGAGCCCCGACGCAGCAATCGATAGCCGCTAC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTAGTACACATCCTGCTTaGCCACGCCATAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPSTHPA*PRHSPE
Trigger: TTCCGGGCTATGGCGTGGGCAAGCAGGATGTGTACT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCAGAGGGCGTCAGAATaGCTTAGTGGCCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKAQRASE*LSGHLW
Trigger: CCAGAGGTGGCCACTAAGGCATTCTGACGCCCTCTG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACAGAAACGATTGACATaGTTCTCTCCCCAACCCCTA +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPQKRLT*FSPQPL
Trigger: TAGGGGTTGGGGAGAGAAGCATGTCAATCGTTTCTG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGCTCTGCACCTCCACCTaGTCCATCCAGGAAGAATGG +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGLCTST*SIQEEW
Trigger: CCATTCTTCCTGGATGGAGCAGGTGGAGGTGCAGAG...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGGCTTGCAGCCGGGCTaGTGCACCCGCCAGGCGTCG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLGLQPG*CTRQAS
Trigger: CGACGCCTGGCGGGTGCACCAGCCCGGCTGCAAGCC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTACACGGATGGTCACCTaGCCGGGCAGAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVTRMVT*PGRAGA
Trigger: GGCTCCTGCTCTGCCCGGCCAGGTGACCATCCGTGT...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGTCGCGGTCACGGCTTaGTGTGATAATGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPVAVTA*CDNVCV
Trigger: AACACATACATTATCACACCAAGCCGTGACCGCGAC...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACTTTACAAGGATCTCCTaGGACTCCCATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDFTRIS*DSHPSI
Trigger: GATGGAGGGATGGGAGTCCCAGGAGATCCTTGTAAA...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACTGGAGGGGAAGGCTGTaGAGAGGTGTTAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDWRGRL*RGVNSR
Trigger: TCGAGAATTAACACCTCTCCACAGCCTTCCCCTCCA...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCATTGGGCAACTCAGGGTaGACTCAGCCACTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPLGNSG*TQPLPS
Trigger: GGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAA...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGCCCTCCAGTTTTGTGTaGGGAGGGCAATGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGPSSFV*GGQCVP
Trigger: GGGAACACATTGCCCTCCCCACACAAAACTGGAGGG...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCAAGAGGGAGATGTGTTTaGGGTCTAGGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPRGRCV*GLGPGR
Trigger: CCTCCCTGGCCCTAGACCCCAAACACATCTCCCTCT...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACTTTCCAGGACAGGGTaGCCAGAGGCTCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPLSRTG*PEALKV
Trigger: CACTTTCAGAGCCTCTGGTCACCCTGTCCTGGAAAG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTGGGACAGATGGCTTCTaGGCCTTTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPGTDGF*AFQPQK
Trigger: TTTCTGTGGCTGAAAGGCTCAGAAGCCATCTGTCCC...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGAGACAGAGCTGGGAGTaGCAGCCACCAAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGRQSWE*QPPKES
Trigger: GCTTTCTTTTGGTGGCTGTCACTCCCAGCTCTGTCT...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGGGCTGCAGGATCTCTaGCCCCACCCCTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLGLQDL*PHPSRL
Trigger: GAGGCGGGAGGGGTGGGGGCAGAGATCCTGCAGCCC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCCAAAGTCCCCGCCCTaGTCACCCAGGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVPKSPP*SPRRGA
Trigger: GGCCCCACGCCTGGGTGAGCAGGGCGGGGACTTTGG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACATTGGAGTATGGGCTaGCCAGGTACTAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPHWSMG*PGTRGA
Trigger: TGCACCCCTAGTACCTGGGCAGCCCATACTCCAATG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTTCTAGCCCAGCTTTGTaGGGACAGATGGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPSSPAL*GQMASE
Trigger: CTCAGAAGCCATCTGTCCCCACAAAGCTGGGCTAGA...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCACCGAGGGTGCCCATTTaGTTTGGTTTCTATTGTACA +
Preference number: 4 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPPRVPI*FGFYCT
Trigger: TGTACAATAGAAACCAAACCAAATGGGCACCCTCGG...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTAGTCTTCTGCCTTTGTaGGTAAAGAGTGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPSLLPL*VKSGEG
Trigger: CCCCTCTCCACTCTTTACCCACAAAGGCAGAAGACT...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTCTCTACTTTCTACAGTaGAGAGACCATCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPLYFLQ*RDHPPC
Trigger: GCAGGGAGGATGGTCTCTCCACTGTAGAAAGTAGAG...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGATTTAAGGGTGTGTTaGGGTATCAGAGTTGTAACT +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGDLRVC*GIRVVT
Trigger: AGTTACAACTCTGATACCTCAACACACCCTTAAATC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGAGGGGAAGGCCCAGTaGTTGCAAGCTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVEGKAQ*LQAGVG
Trigger: ACCAACCCCAGCTTGCAATCACTGGGCCTTCCCCTC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTGTGCAACATCACTTTaGCTTGATTATTCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGCATSL*LDYSWV
Trigger: GACCCAAGAATAATCAAGTCAAAGTGATGTTGCACA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTTCTTGCAGCCTTGCCTaGCCACGATCTCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVSCSLA*PRSRPR
Trigger: ACGTGGCCGAGATCGTGGGCAGGCAAGGCTGCAAGA...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTCCAACTCCCTTACACTaGTGGAAACTGGTGACAGTT +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPPTPLH*WKLVTV
Trigger: AACTGTCACCAGTTTCCAGCAGTGTAAGGGAGTTGG...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAACGGGTCCCGCGGAAGTaGCAGGGGAGCGGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKRVPRK*QGSGVR
Trigger: GCGCACACCGCTCCCCTGCCACTTCCGCGGGACCCG...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGCAGACGGGACACTCTaGGTCCGTCCTCTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVADGTL*VRPLAD
Trigger: ATCTGCGAGAGGACGGACCCAGAGTGTCCCGTCTGC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTTGCGTGGCTGTGATGTaGCAGACGGGACACTCTGGG +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVCVAVM*QTGHSG
Trigger: CCCAGAGTGTCCCGTCTGCCACATCACAGCCACGCA...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGTGGGCCCAGTGGAGTaGGCCCCGGAGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKVGPVE*APEAWG
Trigger: GCCCCATGCCTCCGGGGCCCACTCCACTGGGCCCAC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGGGATGGCAGAGTCATTaGTGTAATGAAGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGGWQSH*CNEAGS
Trigger: GGAGCCTGCTTCATTACACCAATGACTCTGCCATCC...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTATGAAGGTGGGGGTTTaGCCCTTTACCCCAGTATTA +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPMKVGV*PFTPVL
Trigger: TAATACTGGGGTAAAGGGTCAAACCCCCACCTTCAT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGGAGGAGTCCATGGAGTaGAATCCAATCTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGEESME*NPIYWK
Trigger: CTTCCAGTAGATTGGATTTCACTCCATGGACTCCTC...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCCACCCCTCCCTGGCTaGTGTTCTGGAGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVPPLPG*CSGGEG
Trigger: GCCTTCCCCTCCAGAACACCAGCCAGGGAGGGGTGG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACTGGTATCTGAAGATTaGGCAACTCAGGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPLVSED*ATQGGL
Trigger: GAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 72 bp CAAGCTAATAAGGATTCAATAAAGGTTCAGGTCAGGTaGAGAGGGGTGCAGGGAGTCGGGCACTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: QANKDSIKVQVR*RGVQGVGHCMG
Trigger: TCCCATGCAGTGCCCGACTCCCTGCACCCCTCTCAACCTGACCTGAACCTTTATTGAATCCTTATTAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGAAGAAGGGGTGGAGTaGCACACAGCGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLEEGVE*HTAGEV
Trigger: CACCTCCCCCGCTGTGTGTCACTCCACCCCTTCTTC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTGGGACACAGACTCCATaGTTTGCATGGAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKAGTQTP*FAWRIQ
Trigger: TTGAATCCTCCATGCAAATCATGGAGTCTGTGTCCC...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTTTAATCTTGCAGCCTTaGCTGCCCACGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVLILQP*LPTISA
Trigger: GGCCGAGATCGTGGGCAGGCAAGGCTGCAAGATTAA...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCGGCGCCTGACTTGTTaGGGGAGGCACGGATCATGG +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVRRLTC*GRHGSW
Trigger: CCATGATCCGTGCCTCCCGCAACAAGTCAGGCGCCG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAAGGTGGAGAGGGGCTTaGAGCCGGGCTGGTGCACCC +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKRWRGA*SRAGAP
Trigger: GGGTGCACCAGCCCGGCTGCAAGCCCCTCTCCACCT...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTAAGCAGCAAAGGGGGTaGAAGGCCTGTAACAATATG +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKAKQQRG*KACNNM
Trigger: CATATTGTTACAGGCCTTGCACCCCCTTTGCTGCTT...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTCCCGGCAACCGAGGGTaGCCATTTGGTTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVPGNRG*PFGLVS
Trigger: AGAAACCAAACCAAATGGGCACCCTCGGTTGCCGGG...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCATCTCGCTCCCTCTCATaGTCTCTTTCTCTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPSRSLS*SLSLLY
Trigger: ATAGAGGAGAGAAAGAGAGCATGAGAGGGAGCGAGA...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGGGAGCGGCGCTCAGTaGCCCCCAATAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKGSGAQ*PPIEPS
Trigger: GCTGGGCTCTATTGGGGGCCACTGAGCGCCGCTCCC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCCTCGGAAGAAGGGGTaGAGTGACACACAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVPRKKG*SDTQRG
Trigger: CCCCCGCTGTGTGTCACTCCACCCCTTCTTCCGAGG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCAACTCCCTTACACTGCTaGAAACTGGTGACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPTPLHC*KLVTVS
Trigger: GGAAACTGTCACCAGTTTCCAGCAGTGTAAGGGAGT...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCTCAACCACATCAGGTaGGACACAGACTCCATGATT +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKALNHIR*DTDSMI
Trigger: AATCATGGAGTCTGTGTCCCACCTGATGTGGTTGAG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGTTTTATACATTCTACTaGACCCAGGGGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGFYTFY*TQGPSM
Trigger: CATTGAGGGCCCCTGGGTCCAGTAGAATGTATAAAA...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTCAATCTGTAGAGAAGTaGACCGAGGTCACACTTCAA +
Preference number: 4 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPQSVEK*TEVTLQ
Trigger: TTGAAGTGTGACCTCGGTCCACTTCTCTACAGATTG...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGTGCCTGGGGCACCCGTaGTCTCGAACACGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLCLGHP*SRTRGR
Trigger: GCGACCCCGTGTTCGAGATCACGGGTGCCCCAGGCA...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACCTGTCTTATTGAGATaGTCAGTGTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPPVLLR*SVCILS
Trigger: GGAAAGGATGCACACTGATCATCTCAATAAGACAGG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCATATGTGTTGGTTTGCTaGTGGATGCGCTTGATGGTT +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPYVLVC*WMRLMV
Trigger: AACCATCAAGCGCATCCAGCAGCAAACCAACACATA...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTCTCGCAGATGCGTACTaGACACTCCATGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVLADAY*TLHAEQ
Trigger: CTGTTCTGCATGGAGTGTGCAGTACGCATCTGCGAG...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGCTCCCGCCTCGGACCTaGGAGTCTCTAGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLLPPRT*ESLAPA
Trigger: AGCGGGGGCTAGAGACTCCCAGGTCCGAGGCGGGAG...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGATGCCTGAAGAGGAATaGAGGGACCATCCAAATATT +
Preference number: 4 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGMPEEE*RDHPNI
Trigger: AATATTTGGATGGTCCCTCCATTCCTCTTCAGGCAT...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCATCCTTTCCAAGACCCTaGGAAATGAACCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: QITAFQKALVENRSRVGPSFPRP*EMNPSF
Trigger: AAATGAGGGGTTCATTTCCCAGGGTCTTGGAAAGGA...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACAATCTTTTTCCTTGGTaGATTTGTACGTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDNLFPW*ICTCLH
Trigger: GTGAAGACACGTACAAATCCACCAAGGAAAAAGATT...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGAGAGGGCCTCCAGATaGCTGAAGAGGAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLERASR*LKRNGG
Trigger: CCCTCCATTCCTCTTCAGGCATCTGGAGGCCCTCTC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACACCCAAAGTCCCTGTaGCTTTCCCCAGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLHPKSL*LSPASV
Trigger: CACAGAGGCTGGGGAAAGGCACAGGGACTTTGGGTG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCTTAGTGGCCACCTCTaGCAAAACAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RASISKHLAPQITAFQKALSGHL*QNKSFS
Trigger: AGAGAAACTTTTGTTTTGCCAGAGGTGGCCACTAAG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGCAGACACACTACTCTaGCGCCCCCACTTCCACAAC +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVADTLL*RPHFHN
Trigger: GTTGTGGAAGTGGGGGCGCCAGAGTAGTGTGTCTGC...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTGTGGGAAGTCCTTCTTaGAATCTAACTTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPVGSPS*NLTFMR
Trigger: TCTCATAAAAGTTAGATTCCAAGAAGGACTTCCCAC...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGAAGTGCTCCGCTGCTaGGATGATTTCCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLEVLRC*DDFPPG
Trigger: GCCCGGCGGGAAATCATCTCAGCAGCGGAGCACTTC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGGGCCTCCAGATGCCTaGAGAGGAATGGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKGPPDA*RGMEGP
Trigger: TGGTCCCTCCATTCCTCTTCAGGCATCTGGAGGCCC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTCTCTGGAGCTTTAAGTaGTCGGGTGATCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVLWSFK*SGDHSE
Trigger: TTCTGAGTGATCACCCGAGCACTTAAAGCTCCAGAG...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGAGAGAGCGCAGAGCTTaGCGTCGCTCGCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLRERRA*RRSPLW
Trigger: CCAAAGGGGCGAGCGACGCCAAGCTCTGCGCTCTCT...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGCACACTCCGTGGTGTTaGTGCTGCCCTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLHTPWC*CCPSGA
Trigger: TGCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTG...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGTACTGCACACTCCATaGAGAACAGGTTGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLVLHTP*RTGCVR
Trigger: GCGGACACAACCTGTTCTGCATGGAGTGTGCAGTAC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACTTTGTGGGGACAGATaGCTTCTGAGCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLLCGDR*LLSLSA
Trigger: GGCTGAAAGGCTCAGAAGCCATCTGTCCCCACAAAG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTAACCTGATCCAACCCTaGTATCTGAAGATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVNLIQP*YLKIGQ
Trigger: TTGCCCAATCTTCAGATACCAGGGTTGGATCAGGTT...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGTACCACATTGGAGTATaGGCTGCCCAGGTACTAGGG +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVYHIGV*AAQVLG
Trigger: CCCTAGTACCTGGGCAGCCCATACTCCAATGTGGTA...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTATGTGTGTCTGTTTGTaGAATGACTTCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVMCVCL*NDFPGS
Trigger: AGAGCCTGGGAAGTCATTCCACAAACAGACACACAT...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 72 bp CCTCAACCACATCAGGTGGGACACAGACTCCATGATTaGCATGGAGGATTCAAGCTAATAAGGATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PQPHQVGHRLHD*HGGFKLIRIQA
Trigger: AGCTTGAATCCTTATTAGCTTGAATCCTCCATGCAAATCATGGAGTCTGTGTCCCACCTGATGTGGTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACAGCCCCTGTCTTATTaGGATGATCAGTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLQPLSY*DDQCAS
Trigger: GGATGCACACTGATCATCTCAATAAGACAGGGGCTG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAACATATAGATGGAGGTaGACTGGAGCAGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLTYRWR*TGAEGQ
Trigger: CTGACCCTCTGCTCCAGTTCACCTCCATCTATATGT...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAAATATTCGGATGGCTTaGGTGGCTGTGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLNIRMA*VAVMWQ
Trigger: CTGCCACATCACAGCCACGCAAGCCATCCGAATATT...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGGAGGAAATCCCCTCTaGACCTCCACCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLGGNPL*TSTCSI
Trigger: GATGGAGCAGGTGGAGGTGCAGAGGGGATTTCCTCC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGAGGCTGACCCCTCTTTaGAGACCTGGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLRLTPL*RPGFSS
Trigger: TGAGGAGAAGCCAGGTCTTCAAAGAGGGGTCAGCCT...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAGATTGTTACTGCTACTaGTGCCATGGAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLDCYCY*CHGGQS
Trigger: GCTTTGACCTCCATGGCAGCAGTAGCAGTAACAATC...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGAGGAGGAGTCCATaGAGTGAAATCCAATCTACT +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVGRRSP*SEIQST
Trigger: AGTAGATTGGATTTCACTCCATGGACTCCTCCTCCC...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGGCCAGGGAGGGGGATaGCAGAGTCATTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLGQGGG*QSHWCN
Trigger: ATTACACCAATGACTCTGCCATCCCCCTCCCTGGCC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGTCCAACCCTGGTATCTaGAGATTGGGCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLSNPGI*RLGNSG
Trigger: CCCTGAGTTGCCCAATCTTCAGATACCAGGGTTGGA...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAACTGCTACTGCTGCCATaGAGGTCAAAGCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKLLLLP*RSKLSG
Trigger: TCCACTTAGCTTTGACCTCCATGGCAGCAGTAGCAG...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAATTCCACTCCACTCCGTaGGAAGTCCTTCTTGGAATC +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKFHSTP*EVLLGI
Trigger: GATTCCAAGAAGGACTTCCCACGGAGTGGAGTGGAA...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 72 bp CTCGCTCCCTCTCATGCTCTCTTTCTCTCCTCTATTTaGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LAPSHALFLSSI*SLTIRVLCLFL
Trigger: TAGAAACAAACACAAAACACGAATAGTGAGAGACAAAATAGAGGAGAGAAAGAGAGCATGAGAGGGAGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR GCA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCGTGTCTTCACTAGATaGCTCAAATTAAGTCTGACC +
Preference number: 4 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVRVFTR*LKLSLT
Trigger: GGTCAGACTTAATTTGAGGCATCTAGTGAAGACACG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR TCA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAATGTCTGTTTGTGGAATaGCTTCCCAGGCTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: FMRQESTLQVGEERVSFKCLFVE*LPRLLN
Trigger: ATTTAAGAGCCTGGGAAGTCATTCCACAAACAGACA...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGTCCATCCAGGAAGAATaGGACTCTGGAGCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLSIQEE*DSGALS
Trigger: ACTTAAAGCTCCAGAGTCCCATTCTTCCTGGATGGA...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CCA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGGTGCCCATTTGGTTTaGTTTCTATTGTACAGACAT +
Preference number: 4 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLGAHLV*FLLYRH
Trigger: ATGTCTGTACAATAGAAACCAAACCAAATGGGCACC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 72 bp AAGTTTCTCTTAGCTGCTTCCAGATTTAAGGGTGTGTaGAGGTATCAGAGTTGTAACTCTAGTAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: KFLLAASRFKGV*RYQSCNSSKIF
Trigger: GAAAATTTTACTAGAGTTACAACTCTGATACCTCAACACACCCTTAAATCTGGAAGCAGCTAAGAGAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
3UTR CAA 72 bp TCTTGGAATCTAACTTTTATGAGACAAGAAAGCACTTaGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SWNLTFMRQEST*QVGEERVSFKE
Trigger: TTCTTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAAAGTTAGATTCCAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS CCA 90 bp CCACTCCGCACTCGCCGATGCAGCCCAGGCTGTTCTGCCGGAAGGTaGAGAGGGGCTTGCAGCCGGGCTGGTGCACCCGCCAGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: PLRTRRCSPGCSAGR*RGACSRAGAPARRR
Trigger: CCGACGCCTGGCGGGTGCACCAGCCCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS GCA 90 bp AAGCCAGAGTCCACTCCGCACTCGCCGATGCAGCCCAGGCTGTTCTaGCGGAAGGTGGAGAGGGGCTTGCAGCCGGGCTGGTGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KPESTPHSPMQPRLF*RKVERGLQPGWCTR
Trigger: GCGGGTGCACCAGCCCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGGACTCTGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS CCA 90 bp GAGGTACCCGCCGTAGCCAAAGTCCCCGCCCTGCTCACCCAGGCGTaGGGCCTCAAAGCCAGAGTCCACTCCGCACTCGCCGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: EVPAVAKVPALLTQA*GLKARVHSALADAA
Trigger: GGCTGCATCGGCGAGTGCGGAGTGGACTCTGGCTTTGAGGCCCCACGCCTGGGTGAGCAGGGCGGGGACTTTGGCTACGGCGGGTACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGGCCCAGCGCGGGCCTaGGCGGAAGAGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDGPARA*AEEEEE
Trigger: CTCCTCCTCCTCTTCCGCCAAGGCCCGCGCTGGGCC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACACACACTCCGTGGTGTaGCTGCTGCCCTTCAGGCGC +
Preference number: 5 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYTHSVV*LLPFRR
Trigger: GCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTGT...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTCGCGCACGCTCCACGTaGCCTGGGGCACCCGTGATC +
Preference number: 5 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPRARST*PGAPVI
Trigger: GATCACGGGTGCCCCAGGCAACGTGGAGCGTGCGCG...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACTCCCTCCATCCTCTCTaGGCCCGGCCAGCGGAACCA +
Preference number: 5 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDSLHPL*ARPAEP
Trigger: TGGTTCCGCTGGCCGGGCCAAGAGAGGATGGAGGGA...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS GCA 90 bp GACACTCTGGGTCCGTCCTCTCGCAGATGCGTACTGCACACTCCATaGAGAACAGGTTGTGTCCGCAGGGCACAAGGGCGGCAGTCACTT +
Preference number: 5 (lower is better)
Translates to: DTLGPSSRRCVLHTP*RTGCVRRAQGRQSL
Trigger: AAGTGACTGCCGCCCTTGTGCCCTGCGGACACAACCTGTTCTGCATGGAGTGTGCAGTACGCATCTGCGAGAGGACGGACCCAGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTTGTACTCGAGGATCTaGCCAGTGCGCACCGCGATG +
Preference number: 5 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYLYSRI*PVRTAM
Trigger: CATCGCGGTGCGCACTGGCAAGATCCTCGAGTACAA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGAGTAGCGGCTATCGATaGCTGCGTCGGGGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGSSGYR*LRRGSP
Trigger: CGGGGAGCCCCGACGCAGCAATCGATAGCCGCTACT...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACTTTCTCTCCTCTGTGTaGGTCGCCTGTCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDFLSSV*VACLAP
Trigger: GGGAGCGAGACAGGCGACCAACACAGAGGAGAGAAA...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACTTGGTAAGGGTGGGATaGAATTTGCTGAGCCCCCTA +
Preference number: 5 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYLVRVG*NLLSPL
Trigger: TAGGGGGCTCAGCAAATTCAATCCCACCCTTACCAA...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CTCAGAACAGTCCCACCCCACTATTTACAAGGATCTCCTGGGACTCCCATCCCTACCCAGGAGGCAGAGTaGATCGAGAGCCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LRTVPPHYLQGSPGTPIPTQEAE*IESQLK
Trigger: CTTCAGCTGGCTCTCGATCAACTCTGCCTCCTGGGT...AGGGATGGGAGTCCCAGGAGATCCTTGTAAATAGTGGGGTGGGACTGTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGCACAGGGCAGTTTTCTaGGCTGTGACCTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGHRAVF*AVTSFP
Trigger: GGGGAAGGAGGTCACAGCCAAGAAAACTGCCCTGTG...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCACCGAGGGTGCCCATTaGGTTTGGTTTCTATTGTAC +
Preference number: 5 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGTEGAH*VWFLLY
Trigger: GTACAATAGAAACCAAACCAAATGGGCACCCTCGGT...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACAACAGTCTTCTGCCTTaGTGGGTAAAGAGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYNSLLP*WVKSGE
Trigger: CTCTCCACTCTTTACCCACAAAGGCAGAAGACTGTT...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTCTTAATCTTGCAGCCTaGCCTGCCCACGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: RASISKHLAPQITAFQKALNLAA*PAHDLG
Trigger: GCCGAGATCGTGGGCAGGCAAGGCTGCAAGATTAAG...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTAAGGCGGCGCCTGACTaGTTGCGGGAGGCACGGATC +
Preference number: 5 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVKAAPD*LREARI
Trigger: GATCCGTGCCTCCCGCAACAAGTCAGGCGCCGCCTT...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACGTATCTCTAAGCACCTaGCCCCTCAAATCACCGCTT +
Preference number: 5 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDVSLST*PLKSPL
Trigger: AAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATAC...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCGGGTGCCCATTTGGTTaGGTTTCTATTGTACAGACA +
Preference number: 5 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGGCPFG*VSIVQT
Trigger: TGTCTGTACAATAGAAACCAAACCAAATGGGCACCC...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTATTCCCCCTCCTCACTaGCCCCTGCGACAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVIPPPH*PLRQGR
Trigger: CCTGCCCTGTCGCAGGGGCAAGTGAGGAGGGGGAAT...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CTGTCCCTAGGTGGGGCGAGAAGAGTAAATTGGGTAGAGGGAGATGTGTTTGGGGAATATTCGGATGGCTaGCGTGGCTGTGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: LSLGGARRVNWVEGDVFGEYSDG*RGCDVA
Trigger: TGCCACATCACAGCCACGCAAGCCATCCGAATATTC...CCCAAACACATCTCCCTCTACCCAATTTACTCTTCTCGCCCCACCTAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ACCCTGGTATCTGAAGATTGGGCAACTCAGGGTGGACTCAGCCACTTCCCTCCTGATGAAGGTGGGGGTTaGACCCTTTACCCCAGTATT +
Preference number: 5 (lower is better)
Translates to: TLVSEDWATQGGLSHFPPDEGGG*TLYPSI
Trigger: AATACTGGGGTAAAGGGTCAAACCCCCACCTTCATC...AGGAGGGAAGTGGCTGAGTCCACCCTGAGTTGCCCAATCTTCAGATACCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAAGGAAGTCGTTTTCATaGTTGTACTCGAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPRKSFS*LYSRIL
Trigger: CAAGATCCTCGAGTACAACAATGAAAACGACTTCCT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTTGGTTTGGTTTCTATaGTACAGACATCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGLVWFL*YRHLRM
Trigger: CATCCTGAGATGTCTGTACAATAGAAACCAAACCAA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GGAGGGTTTGAGCTGGGAGCCCCAGGAGGGGACATACCACATTGGAGTATGGGCTTTTCCTTGGTGGATTaGTACGTGTCTTCACTAGAT +
Preference number: 5 (lower is better)
Translates to: GGFELGAPGGDIPHWSMGFSLVD*YVSSLD
Trigger: ATCTAGTGAAGACACGTACAAATCCACCAAGGAAAA...GCCCATACTCCAATGTGGTATGTCCCCTCCTGGGGCTCCCAGCTCAAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCAGAAGCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAAGATTTAAGGGTGTGTaGAGGTATCAGAGTTGTAAC +
Preference number: 5 (lower is better)
Translates to: AEAKPSSFVWGGQCVPRPRFKGV*RYQSCN
Trigger: GTTACAACTCTGATACCTCAACACACCCTTAAATCT...TGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp GCCAAGCCCTCCAGTTTTGTGTGGGGAGGGCAATGTGTTCCCAGGCCAGGGTACATTCGTGTTTTGTGTTaGTTTCTAGGTTTGGCTCAA +
Preference number: 5 (lower is better)
Translates to: AKPSSFVWGGQCVPRPGYIRVLC*FLGLAQ
Trigger: TTGAGCCAAACCTAGAAACAAACACAAAACACGAAT...GTACCCTGGCCTGGGAACACATTGCCCTCCCCACACAAAACTGGAGGGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTCCAAGCCCTCCAGTTTaGTGTGGGGAGGGCAATGTG +
Preference number: 5 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVPSPPV*CGEGNV
Trigger: CACATTGCCCTCCCCACACAAAACTGGAGGGCTTGG...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTGATTGCAAGCTGGGGTaGGTAGAAGGCAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: RASISKHLAPQITAFQKADCKLG*VEGKCF
Trigger: AAAGCACTTGCCTTCTACCAACCCCAGCTTGCAATC...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAGCGGCGCCTGACTTGTaGCGGGAGGCACGGATCATG +
Preference number: 5 (lower is better)
Translates to: FMRQESTLQVGEERVSFKAAPDL*REARIM
Trigger: CATGATCCGTGCCTCCCGCAACAAGTCAGGCGCCGC...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CAAATCACCGCTTTCCAAAAGGCTTTAGTGGAAAACAGGTCCAGGGTGGGCCCACTAGGTTTGGCTCAATaGGTAAGGGTGGGATTGAAT +
Preference number: 5 (lower is better)
Translates to: QITAFQKALVENRSRVGPLGLAQ*VRVGLN
Trigger: ATTCAATCCCACCCTTACCAATTGAGCCAAACCTAG...TGGGCCCACCCTGGACCTGTTTTCCACTAAAGCCTTTTGGAAAGCGGTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATAGGCCTGCTAGGCCTTAATTCTGGATTCCCCCTCCTCACTTGCCCCTGCGACCTCACTATTCGTGTTTaGTGTTTGTTTCTAGGTTTG +
Preference number: 5 (lower is better)
Translates to: IGLLGLNSGFPLLTCPCDLTIRV*CLFLGL
Trigger: CAAACCTAGAAACAAACACAAAACACGAATAGTGAG...GTCGCAGGGGCAAGTGAGGAGGGGGAATCCAGAATTAAGGCCTAGCAGGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp AAAATCCAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGCTCAAGGCCTTAATCTaGCAGCCTTGCCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: KIQPKNYSLNIMPIVMKVLKALI*QPCLPT
Trigger: CGTGGGCAGGCAAGGCTGCAAGATTAAGGCCTTGAG...CACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CAGCCCAAGAACTACTCCCTAAATATAATGCCCATAGTGATGAAGGTGGGGGTTGGCGAGAAGAGTAAATaGGGTAGAGGGAGATGTGTT +
Preference number: 5 (lower is better)
Translates to: QPKNYSLNIMPIVMKVGVGEKSK*GRGRCV
Trigger: AACACATCTCCCTCTACCCAATTTACTCTTCTCGCC...AACCCCCACCTTCATCACTATGGGCATTATATTTAGGGAGTAGTTCTTGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAAGGGGACATACCACATaGGAGTATGGGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FMRQESTLQVGEERVSFKRGHTT*EYGLPR
Trigger: CCTGGGCAGCCCATACTCCAATGTGGTATGTCCCCT...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp CGAGCGAGTATCTCTAAGCACCTTGCCCCTCAAATCACCGCTTTCCAAAAGGCTTTGAAATCTTTTTCCTaGGTGGATTTGTACGTGTCT +
Preference number: 5 (lower is better)
Translates to: RASISKHLAPQITAFQKALKSFS*VDLYVS
Trigger: AGACACGTACAAATCCACCAAGGAAAAAGATTTCAA...AGCCTTTTGGAAAGCGGTGATTTGAGGGGCAAGGTGCTTAGAGATACTCGCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAATCCTCTAGCCCAGCTTaGTGGGGACAGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FMRQESTLQVGEERVSFKSSSPA*WGQMAS
Trigger: AGAAGCCATCTGTCCCCACAAAGCTGGGCTAGAGGA...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGAATCCCTTTCTTTGTTaGGCTCTGCCGGCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLNPFLC*ALPAPL
Trigger: CAGGGGAGCCGGCAGAGCCAAACAAAGAAAGGGATT...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTAAAGTCGTTTTCATTGTaGTACTCGAGGATCTTGCCA +
Preference number: 5 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLKSFSL*YSRILP
Trigger: TGGCAAGATCCTCGAGTACAACAATGAAAACGACTT...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp AAATCTAGATCTCTTAAATCTCACACATCTCTGAGGGTTCCTATAGGCCTGCTACGTGGGAAGTCCTTCTaGGAATCTAACTTTTATGAG +
Preference number: 5 (lower is better)
Translates to: KSRSLKSHTSLRVPIGLLRGKSF*ESNFYE
Trigger: CTCATAAAAGTTAGATTCCAAGAAGGACTTCCCACG...TAGCAGGCCTATAGGAACCCTCAGAGATGTGTGAGATTTAAGAGATCTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp ATTTTGTCTCTCACTATTCGTGTTTTGTGTTTGTTTCTAGGTTTGGCTCAATTGGAACAATTACTGAGATaGTTACTGCTACTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ILSLTIRVLCLFLGLAQLEQLLR*LLLLLP
Trigger: TGGCAGCAGTAGCAGTAACAATCTCAGTAATTGTTC...CAATTGAGCCAAACCTAGAAACAAACACAAAACACGAATAGTGAGAGACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS-3UTR CAA 90 bp TTTATGAGACAAGAAAGCACTTTGCAAGTAGGTGAAGAACGAGTCAGCTTTAAAAGTGCTTTAAAAATGTaGATTTCTCACACGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FMRQESTLQVGEERVSFKSALKM*ISHTQK
Trigger: CTTCTGCGTGTGAGAAATCAACATTTTTAAAGCACT...TTTAAAGCTGACTCGTTCTTCACCTACTTGCAAAGTGCTTTCTTGTCTCATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS TCA 72 bp CCTCGCGCGCACGCTCCACGTTGCCTGGGGCACCCGTaGTCTCGAACACGGGGTCGCGGTCACGGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: PRAHAPRCLGHP*SRTRGRGHGWP
Trigger: CGGCCAGCCGTGACCGCGACCCCGTGTTCGAGATCACGGGTGCCCCAGGCAACGTGGAGCGTGCGCGCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442784.1
CDS TCA 72 bp CCTCGCGCGCACGCTCCACGTTGCCTGGGGCACCCGTaGTCTCGAACACGGGGTCGCGGTCACGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: PRAHAPRCLGHP*SRTRGRGHGLV
Trigger: CACCAAGCCGTGACCGCGACCCCGTGTTCGAGATCACGGGTGCCCCAGGCAACGTGGAGCGTGCGCGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS GCA 72 bp TCCACTCCGCACTCGCCGATGCAGCCCAGGCTGTTCTaGCGGAAGGTGGAGAGGGGCTTGCAGCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: STPHSPMQPRLF*RKVERGLQPGW
Trigger: CCAGCCCGGCTGCAAGCCCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS CCA 72 bp GCCGTAGCCAAAGTCCCCGCCCTGCTCACCCAGGCGTaGGGCCTCAAAGCCAGAGTCCACTCCGCACTCGCC +
Preference number: 6 (lower is better)
Translates to: AVAKVPALLTQA*GLKARVHSALA
Trigger: GGCGAGTGCGGAGTGGACTCTGGCTTTGAGGCCCCACGCCTGGGTGAGCAGGGCGGGGACTTTGGCTACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS GCA 72 bp GGGCCTCAAAGCCAGAGTCCACTCCGCACTCGCCGATaGAGCCCAGGCTGTTCTGCCGGAAGGTGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GPQSQSPLRTRR*SPGCSAGRWRG
Trigger: CCCTCTCCACCTTCCGGCAGAACAGCCTGGGCTGCATCGGCGAGTGCGGAGTGGACTCTGGCTTTGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS CAA 72 bp GGTGCACCCGCCAGGCGTCGGAGTAGCGGCTATCGATaGCTGCGTCGGGGCTCCCCGCCAGGAAGTCGTTTT +
Preference number: 6 (lower is better)
Translates to: GAPARRRSSGYR*LRRGSPPGSRF
Trigger: AAAACGACTTCCTGGCGGGGAGCCCCGACGCAGCAATCGATAGCCGCTACTCCGACGCCTGGCGGGTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS GCA 72 bp GCTCGGAGGTGGGCACGGGAACACACTCCGTGGTGTTaGTGCTGCCCTTCAGGCGCAGCTCGGCCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: ARRWAREHTPWC*CCPSGAARPLC
Trigger: ACAAAGAGGCCGAGCTGCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTGTTCCCGTGCCCACCTCCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS CCA 72 bp TCCAGGGTGGGCCCAGTGGAGTGGGCCCCGGAGGCATaGGGCACGGGGCTTAGGAGAATATTCGGATGGCTT +
Preference number: 6 (lower is better)
Translates to: SRVGPVEWAPEA*GTGLRRIFGWL
Trigger: AAGCCATCCGAATATTCTCCTAAGCCCCGTGCCCCATGCCTCCGGGGCCCACTCCACTGGGCCCACCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3
CDS GCA 72 bp CGGAGGTGGGCACGGGAACACACTCCGTGGTGTTGCTaGTGCCCTTCAGGCGCAGCTCGGCCTCTTTGTAGA +
Preference number: 6 (lower is better)
Translates to: RRWAREHTPWCC*CPSGAARPLCR
Trigger: TCTACAAAGAGGCCGAGCTGCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTGTTCCCGTGCCCACCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS GCA 72 bp AGGTGGGCACGGGAACACACTCCGTGGTGTTGCTGCTaGCCTTCAGGCGCAGCTCGGCCTCTTTGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: RWAREHTPWCCC*PSGAARPLCRE
Trigger: CTCTCTACAAAGAGGCCGAGCTGCGCCTGAAGGGCAGCAGCAACACCACGGAGTGTGTTCCCGTGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442784.1
ENST00000532414.3
CDS CAA 72 bp CATGGGGCACGGGGCTTAGGAGAATATTCGGATGGCTaGCGTGGCTGTGATGTGGCAGACGGGACACTCTGG +
Preference number: 6 (lower is better)
Translates to: HGARGLGEYSDG*RGCDVADGTLW
Trigger: CCAGAGTGTCCCGTCTGCCACATCACAGCCACGCAAGCCATCCGAATATTCTCCTAAGCCCCGTGCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532414.3