RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL8 (Homo sapiens)

Ensembl gene IDs: ENSG00000123600

Ensembl transcript IDs: ENST00000375258.8, ENST00000375258.9, ENST00000392599.6, ENST00000392604.6, ENST00000442541.1, ENST00000442778.5, ENST00000447486.5, ENST00000453846.5, ENST00000460188.5, ENST00000460539.5, ENST00000462821.1, ENST00000463392.5, ENST00000483284.5, ENST00000612742.4, ENST00000612742.5

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGCAAGTGAGAGTGCTCTGCGAGGAGGGATGCCAAGTGGAAGGCTaGAGCCTGAGGGGGTGGGGCGAGTGCAGAACTAGGCAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: MQVRVLCEEGCQVEG*SLRGWGECRTRQKQ
Trigger: CTGCTTCTGCCTAGTTCTGCACTCGCCCCACCCCCTCAGGCTTCAGCCTTCCACTTGGCATCCCTCCTCGCAGAGCACTCTCACTTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp TTTGCCGAGCTCCAGGGGCAGCTGAGGGTGGGCTGTCTGACCATCTaGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTTG +
Preference number: 1 (lower is better)
Translates to: FAELQGQLRVGCLTI*RFQCAPSISCQPDL
Trigger: CAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACAGCCCACCCTCAGCTGCCCCTGGAGCTCGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp GGTAGGTTAAGAGACAGAAAGACTGACCAGGCAAGCAGAAGACACTaGTGGAAATGGCCCTGCTGCGCAGCCATGTGGAATAGGAAGGCT +
Preference number: 1 (lower is better)
Translates to: GRLRDRKTDQASRRH*WKWPCCAAMWNRKA
Trigger: AGCCTTCCTATTCCACATGGCTGCGCAGCAGGGCCATTTCCACCAGTGTCTTCTGCTTGCCTGGTCAGTCTTTCTGTCTCTTAACCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp AGAAGCATTTCCCGCCCTGGGCCCTGGATCTACTCAGTGCCTACCTaGTGGAGAAAATCAAAGATAAAGACCCAGATCACTGGGATGCCA +
Preference number: 1 (lower is better)
Translates to: RSISRPGPWIYSVPT*WRKSKIKTQITGMP
Trigger: TGGCATCCCAGTGATCTGGGTCTTTATCTTTGATTTTCTCCAGCAGGTAGGCACTGAGTAGATCCAGGGCCCAGGGCGGGAAATGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp GGAAATGGCCCTGCTGCGCAGCCATGTGGAATAGGAAGGCTATGCTaGACAGAGCCCAAAAGAGACCAGTTTGTGTCTCACAGTCCAAAT +
Preference number: 1 (lower is better)
Translates to: GNGPAAQPCGIGRLC*TEPKRDQFVSHSPN
Trigger: ATTTGGACTGTGAGACACAAACTGGTCTCTTTTGGGCTCTGTCCAGCATAGCCTTCCTATTCCACATGGCTGCGCAGCAGGGCCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp GGCTGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATaGCAACCTGACTTGCCAGAATTAGGGTCACTGTGCTCTGAGACA +
Preference number: 1 (lower is better)
Translates to: GCLTIWRFQCAPSIS*QPDLPELGSLCSET
Trigger: TGTCTCAGAGCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp AGCAGTGAGGACAGCCAGAGGACACTCTCATTGCCATCTTGGTTTTaGTGGCATTTGGCCGGCTTCTTCACTGCAACCTGTTTTATCAGC +
Preference number: 1 (lower is better)
Translates to: SSEDSQRTLSLPSWF*WHLAGFFTATCFIS
Trigger: GCTGATAAAACAGGTTGCAGTGAAGAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTGGCTGTCCTCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp AGTGAGGACAGCCAGAGGACACTCTCATTGCCATCTTGGTTTTGGTaGCATTTGGCCGGCTTCTTCACTGCAACCTGTTTTATCAGCAAG +
Preference number: 1 (lower is better)
Translates to: SEDSQRTLSLPSWFW*HLAGFFTATCFISK
Trigger: CTTGCTGATAAAACAGGTTGCAGTGAAGAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTGGCTGTCCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp GACTCAGAAAGCTCTTTCTTCCCTGGTGCCTTTCCCAGCAGCATTTaGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGAATCA +
Preference number: 1 (lower is better)
Translates to: DSESSFFPGAFPSSI*AHPLQEQQVEVLES
Trigger: TGATTCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGAAAGGCACCAGGGAAGAAAGAGCTTTCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp CTCTCTCTCTCTGGAAATACTATTACTACTGCTACCACTGCTATATaGTGTGTTGGCTGTGACTGGACAGCATCCCTCCCCTGGTGTTTT +
Preference number: 1 (lower is better)
Translates to: LSLSGNTITTATTAI*CVGCDWTASLPWCF
Trigger: AAAACACCAGGGGAGGGATGCTGTCCAGTCACAGCCAACACATCATATAGCAGTGGTAGCAGTAGTAATAGTATTTCCAGAGAGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp CCACCTTGGGCCATGATTTTTAAACGGAGACACAAGGAGATCTGCTaGGGTTCCCATAGCAACATTAACTTATCTAAACTGCCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: PPWAMIFKRRHKEIC*GSHSNINLSKLPLL
Trigger: CAGCAAGGGCAGTTTAGATAAGTTAATGTTGCTATGGGAACCCCAGCAGATCTCCTTGTGTCTCCGTTTAAAAATCATGGCCCAAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp GACAGTTGTCTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTaGATCCAGACGCCAAGAGAGGATTCTTGGATCTTGTGCAAGAAA +
Preference number: 1 (lower is better)
Translates to: DSCLKQSLPLIPERV*IQTPREDSWILCKK
Trigger: TTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp TCCATTACAAGAGCAGCAAGTAGAGGTTTTGGAATCAGAGAGTTCTaGGTCCGAGTTGTGACTCTGCTACTTACTAGATGTGGTATCCTG +
Preference number: 1 (lower is better)
Translates to: SITRAASRGFGIREF*VRVVTLLLTRCGIL
Trigger: CAGGATACCACATCTAGTAAGTAGCAGAGTCACAACTCGGACCCAGAACTCTCTGATTCCAAAACCTCTACTTGCTGCTCTTGTAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp AGAATTCTCTTGGGTATGACAGTTGTCTTAAACAGAGCTTACCACTaGTACCAGAAAGGGTCTGGATCCAGACGCCAAGAGAGGATTCTT +
Preference number: 1 (lower is better)
Translates to: RILLGMTVVLNRAYH*YQKGSGSRRQERIL
Trigger: AAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCCAAGAGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp AAACCACCTTGGGCCATGATTTTTAAACGGAGACACAAGGAGATCTaGTGGGGTTCCCATAGCAACATTAACTTATCTAAACTGCCCTTG +
Preference number: 1 (lower is better)
Translates to: KPPWAMIFKRRHKEI*WGSHSNINLSKLPL
Trigger: CAAGGGCAGTTTAGATAAGTTAATGTTGCTATGGGAACCCCAGCAGATCTCCTTGTGTCTCCGTTTAAAAATCATGGCCCAAGGTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp CTGATACCAGAAAGGGTCTGGATCCAGACGCCAAGAGAGGATTCTTaGATCTTGTGCAAGAAAGAATTGAGTCCATACAGCAAAGTGAAA +
Preference number: 1 (lower is better)
Translates to: LIPERVWIQTPREDS*ILCKKELSPYSKVK
Trigger: TTTCACTTTGCTGTATGGACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTCTGGTATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp AGCCTAGTAGGTCTCAGCTTCATTTTACACAGTCCCTATTCAAGATaGAGTTGCTCTGGTTCAAAAGCCCTTGATACAAGAGCTTGTCAG +
Preference number: 1 (lower is better)
Translates to: SLVGLSFILHSPYSR*SCSGSKALDTRACQ
Trigger: CTGACAAGCTCTTGTATCAAGGGCTTTTGAACCAGAGCAACTTCATCTTGAATAGGGACTGTGTAAAATGAAGCTGAGACCTACTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp AGTTTGTGCAAAAACCTTTATGTGGTCTTCCTTGCCACTGATCTCTaGCCTCACTCCATTCCATTCTATAGACAACTCCTCAACCTCTCT +
Preference number: 1 (lower is better)
Translates to: SLCKNLYVVFLATDL*PHSIPFYRQLLNLS
Trigger: AGAGAGGTTGAGGAGTTGTCTATAGAATGGAATGGAGTGAGGTCAGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp GCGAGTGCAGAACTAGGCAGAAGCAGAATGCTGAAAAGAACTGATTaGAAGCTTTTTGCTTTGTCATTCCTCTCAGTTCCTTTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: ASAELGRSRMLKRTD*KLFALSFLSVPFLL
Trigger: GAGAAGGAAAGGAACTGAGAGGAATGACAAAGCAAAAAGCTTTCAATCAGTTCTTTTCAGCATTCTGCTTCTGCCTAGTTCTGCACTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp TTCCTATCTCATCCTGTGACTAAGAATGTCTTAACCTCCTGGGATTaGAGCCTAGTAGGTCTCAGCTTCATTTTACACAGTCCCTATTCA +
Preference number: 1 (lower is better)
Translates to: FLSHPVTKNVLTSWD*SLVGLSFILHSPYS
Trigger: TGAATAGGGACTGTGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTCTTAGTCACAGGATGAGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp ATGGTTCTGATAGCTTTAAGTTTTGCCTCCAAGAGGGCAGCTATCTaGATATGGGTGAATTTTCACGTACAAGCTAGAGTACAGCAACGA +
Preference number: 1 (lower is better)
Translates to: MVLIALSFASKRAAI*IWVNFHVQARVQQR
Trigger: TCGTTGCTGTACTCTAGCTTGTACGTGAAAATTCACCCATATGCAGATAGCTGCCCTCTTGGAGGCAAAACTTAAAGCTATCAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp AAAGACACGAAGCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTTaGATCCGCTATTTAGAACTGAGAGAGACAGTACAATTTACATGT +
Preference number: 1 (lower is better)
Translates to: KDTKPNFTVPVKRLA*IRYLELRETVQFTC
Trigger: ACATGTAAATTGTACTGTCTCTCTCAGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGCTTCGTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp GAAAGGGTCTGGATCCAGACGCCAAGAGAGGATTCTTGGATCTTGTaGAAGAAAGAATTGAGTCCATACAGCAAAGTGAAAACAAGTTTA +
Preference number: 1 (lower is better)
Translates to: ERVWIQTPREDSWIL*KKELSPYSKVKTSL
Trigger: TAAACTTGTTTTCACTTTGCTGTATGGACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp TCCTCAACCTCTCTCAATACATTTATAAGACACCATATCTCAAACTaGTCTCAGATGGCTCCAGTTCAGAGACTAGAAGTCATACACCTG +
Preference number: 1 (lower is better)
Translates to: SSTSLNTFIRHHISN*SQMAPVQRLEVIHL
Trigger: CAGGTGTATGACTTCTAGTCTCTGAACTGGAGCCATCTGAGATCAGTTTGAGATATGGTGTCTTATAAATGTATTGAGAGAGGTTGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 90 bp CTATTTATATTTATAACTACACCAAAGCCATCTTGCGGGTACCTTTaGGCCTCTCAAATCCCCAACCATATTCCAAGAAACCGTATTCCA +
Preference number: 1 (lower is better)
Translates to: LFIFITTPKPSCGYL*ASQIPNHIPRNRIP
Trigger: TGGAATACGGTTTCTTGGAATATGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAATATAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp TGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTaGGGTTTAACAATCCAGATGGTTCTGATAGCTTTAAGTTTTGCC +
Preference number: 1 (lower is better)
Translates to: CVIYSGFRTLMSWKF*GLTIQMVLIALSFA
Trigger: GGCAAAACTTAAAGCTATCAGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 90 bp CATTCAGCTAACTCTAGCTGTTCCTTACTTAAGGTTAAGTGGTTGTaGAACCACAGACACTGTAGAATCAGAAGCTGTTGTTTTAAACTC +
Preference number: 1 (lower is better)
Translates to: HSANSSCSLLKVKWL*NHRHCRIRSCCFKL
Trigger: GAGTTTAAAACAACAGCTTCTGATTCTACAGTGTCTGTGGTTTCACAACCACTTAACCTTAAGTAAGGAACAGCTAGAGTTAGCTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp GATTCTTCTCCATTCTTTTTCAGAGCTAATCTCTCTCTCTCTCTCTaGAAATACTATTACTACTGCTACCACTGCTATATGATGTGTTGG +
Preference number: 1 (lower is better)
Translates to: DSSPFFFRANLSLSL*KYYYYCYHCYMMCW
Trigger: CCAACACATCATATAGCAGTGGTAGCAGTAGTAATAGTATTTCCAGAGAGAGAGAGAGAGATTAGCTCTGAAAAAGAATGGAGAAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 90 bp ATCGAGAGAGGCAAAGCAAATAAGTTCTCAGAAGTCAATGTTAAATaGGTGTTTCAATACAGGCAAATGTGTCATACCGAATGCAAAACT +
Preference number: 1 (lower is better)
Translates to: IERGKANKFSEVNVK*VFQYRQMCHTECKT
Trigger: AGTTTTGCATTCGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGAACTTATTTGCTTTGCCTCTCTCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCTGCTCTGCAGCCTCCTaGGTCCCTTCTGCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCCSAAS*VPSAGA
Trigger: TGCACCTGCAGAAGGGACCCAGGAGGCTGCAGAGCA...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp AGGCTGAAGCAAGAGAATGGCGTGAACCCGGGAGGTGGAGCTGGCAGTGAGCTGAATGTCTTAACCTCCTaGGATTGCAGCCTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: RLKQENGVNPGGGAGSELNVLTS*DCSLVG
Trigger: ACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATT...CAGCTCACTGCCAGCTCCACCTCCCGGGTTCACGCCATTCTCTTGCTTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCCAAGTGAGAGTGCTCTaGGAGGAGGGATGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCQVRVL*EEGCQV
Trigger: CACTTGGCATCCCTCCTCGCAGAGCACTCTCACTTG...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTTGAATCCGCTATTTAGAACTAGGTGGAGCTGGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: AEFYCASQEAGLNPLFRTRWSWQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCCAGCTCCACCT...AGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TCCCAGCAGCATTTGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGACCTTCCACTCCAGGTTaGAGTGCAGTGGTGCGATCT +
Preference number: 2 (lower is better)
Translates to: SQQHLGPSITRAASRGFGPSTPG*SAVVRS
Trigger: AGATCGCACCACTGCACTCCAACCTGGAGTGGAAGG...TCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp AAGCTAGAGTACAGCAACGACTTAGAATCACACACGGGTAGAAACCGGGACGTGCCTTCCACTCCAGGTTaGAGTGCAGTGGTGCGATCT +
Preference number: 2 (lower is better)
Translates to: KLEYSNDLESHTGRNRDVPSTPG*SAVVRS
Trigger: AGATCGCACCACTGCACTCCAACCTGGAGTGGAAGG...CACGTCCCGGTTTCTACCCGTGTGTGATTCTAAGTCGTTGCTGTACTCTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GGGTATGACAGTTGTCTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTGGACAATCTCAGCTCACTaGAACCTCCGCCTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: GYDSCLKQSLPLIPERVWTISAH*NLRLRG
Trigger: GCCTCGGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...CCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp ACTGCGCCCGGCCCTCGAGGGGATAAATACATTTTTAACTGCCACAATTTAAGACTGGTCTTGAACTCCTaGGCTCAACCGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TAPGPRGDKYIFNCHNLRLVLNS*AQPICL
Trigger: CAGGCAGATCGGTTGAGCTCAGGAGTTCAAGACCAG...TCTTAAATTGTGGCAGTTAAAAATGTATTTATCCCCTCGAGGGCCGGGCGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TTTGAGGACTTGCCATCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCAGGTGGAGCTGGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: FEDLPSRQVCAKTFMWSSRWSWQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCCAGCTCCACCT...GGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTGCTCTGAGACACTTTaGGATGATGCTCAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDCSETL*DDAQGS
Trigger: GCTCCCTTGAGCATCATCTCAAAGTGTCTCAGAGCA...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GCTGAGAATGTACATTCAAGAACTAGCCTGAGACCTACCTCCCCCAAGAAACCTACAGGTGCGAGCCATTaGACCTGGCCTAACAACTTG +
Preference number: 2 (lower is better)
Translates to: AENVHSRTSLRPTSPKKPTGASH*TWPNNL
Trigger: CAAGTTGTTAGGCCAGGTGCAATGGCTCGCACCTGT...AGGTTTCTTGGGGGAGGTAGGTCTCAGGCTAGTTCTTGAATGTACATTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TCCCAGCAGCATTTGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGATTAACCTCCTGGGATTaGAGCCTAGTAGGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: SQQHLGPSITRAASRGFGLTSWD*SLVGLS
Trigger: GCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAA...TCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp AAGCTAGAGTACAGCAACGACTTAGAATCACACACGGGTAGAAACCGGGACGTGAGACACAAGGAGATCTaGTGGGGTTCCCATAGCAAC +
Preference number: 2 (lower is better)
Translates to: KLEYSNDLESHTGRNRDVRHKEI*WGSHSN
Trigger: GTTGCTATGGGAACCCCAGCAGATCTCCTTGTGTCT...CACGTCCCGGTTTCTACCCGTGTGTGATTCTAAGTCGTTGCTGTACTCTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGGGTCCCTTCTGCAGGTaGACTTGCTTTTTCAATCTG +
Preference number: 2 (lower is better)
Translates to: PSGDFSVLHPSHANLTCQGPFCR*TCFFNL
Trigger: CAGATTGAAAAAGCAAGTGCACCTGCAGAAGGGACC...CTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GAATGTCTTAACCTCCTGGGATTGCAGCCTAGTAGGTCTCAGCTTCATTTTACACTGGTCTTGAACTCCTaGGCTCAACCGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ECLNLLGLQPSRSQLHFTLVLNS*AQPICL
Trigger: CAGGCAGATCGGTTGAGCTCAGGAGTTCAAGACCAG...TGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACGAGGAGCAGAGGCTTTaGAAGAGGTCGATTAGTGAT +
Preference number: 2 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDEEQRL*KRSISD
Trigger: ATCACTAATCGACCTCTTTCAAAGCCTCTGCTCCTC...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGGGTGTGCTTTCTCTCTaGAATCAGATGACAATGGGA +
Preference number: 2 (lower is better)
Translates to: PSGDFSVLHPSHANLTCQGVLSL*NQMTMG
Trigger: TCCCATTGTCATCTGATTGCAGAGAGAAAGCACACC...CTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCTTGCCACTGATCTCTAGCTGGGACAACAGGTaGGTGCCACCATCACTGGCT +
Preference number: 2 (lower is better)
Translates to: SRQVCAKTFMWSSLPLISSWDNR*VPPSLA
Trigger: AGCCAGTGATGGTGGCACGCACCTGTTGTCCCAGCT...AGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp AAGCTAGAGTACAGCAACGACTTAGAATCACACACGGGTAGAAACCGGGACGTGAGCCGAATTTTACTGTaGCAGTCAAGAGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: KLEYSNDLESHTGRNRDVSRILL*QSRGWL
Trigger: AAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGCT...CACGTCCCGGTTTCTACCCGTGTGTGATTCTAAGTCGTTGCTGTACTCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp GCTGAGAATGTACATTCAAGAACTAGCCTGAGACCTACCTCCCCCAAGAAACCTCCATCTTGGTTTTGGTaGCATTTGGCCGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: AENVHSRTSLRPTSPKKPPSWFW*HLAGFF
Trigger: GAAGAAGCCGGCCAAATGCCACCAAAACCAAGATGG...AGGTTTCTTGGGGGAGGTAGGTCTCAGGCTAGTTCTTGAATGTACATTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACCTCTCATTGCCATCTTaGTTTTGGTGGCATTTGGCC +
Preference number: 2 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDLSLPS*FWWHLA
Trigger: GGCCAAATGCCACCAAAACCAAGATGGCAATGAGAG...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TTTGAGGACTTGCCATCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCATGATGTGTTGGCTGTaGCTGGACAGCATCCCTCCC +
Preference number: 2 (lower is better)
Translates to: FEDLPSRQVCAKTFMWSSMMCWL*LDSIPP
Trigger: GGGAGGGATGCTGTCCAGTCACAGCCAACACATCAT...GGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTTGAATCCGCTATTTAGAACTATTCAAGAACTAGCCTaGGACCTACCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: AEFYCASQEAGLNPLFRTIQELA*DLPPPR
Trigger: TCTTGGGGGAGGTAGGTCTCAGGCTAGTTCTTGAAT...AGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GAATGTCTTAACCTCCTGGGATTGCAGCCTAGTAGGTCTCAGCTTCATTTTACAACAGGTGCGAGCCATTaGACCTGGCCTAACAACTTG +
Preference number: 2 (lower is better)
Translates to: ECLNLLGLQPSRSQLHFTTGASH*TWPNNL
Trigger: CAAGTTGTTAGGCCAGGTGCAATGGCTCGCACCTGT...TGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCAAGAGGGCAGCTATCTaGATATGGGTGAATTTTCAC +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCKRAAI*IWVNFH
Trigger: GTGAAAATTCACCCATATGCAGATAGCTGCCCTCTT...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACCCATGTTGCCCATTCTaGTGGCATCATCAATTAAGC +
Preference number: 2 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDPCCPF*WHHQLS
Trigger: GCTTAATTGATGATGCCACCAGAATGGGCAACATGG...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTTGAATCCGCTATTTAGAACTCTCTCTGCAATCAGATaGCAATGGGAAGAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: AEFYCASQEAGLNPLFRTLSAIR*QWEESD
Trigger: GTCAGACTCTTCCCATTGTCATCTGATTGCAGAGAG...AGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TCCCAGCAGCATTTGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGAACCTGTATCTTGTACTaGCTTCCTATCTCATCCTGT +
Preference number: 2 (lower is better)
Translates to: SQQHLGPSITRAASRGFGTCILY*LPISSC
Trigger: ACAGGATGAGATAGGAAGTCAGTACAAGATACAGGT...TCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp AAGCTAGAGTACAGCAACGACTTAGAATCACACACGGGTAGAAACCGGGACGTGCTCCCCCAAGAAACCTaGTTCTTCTCCATTCTTTTT +
Preference number: 2 (lower is better)
Translates to: KLEYSNDLESHTGRNRDVLPQET*FFSILF
Trigger: AAAAAGAATGGAGAAGAATCAGGTTTCTTGGGGGAG...CACGTCCCGGTTTCTACCCGTGTGTGATTCTAAGTCGTTGCTGTACTCTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TCCCAGCAGCATTTGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGACCTGGAAATAAGGTGTaGTTTCTCTCTGCAATCAGA +
Preference number: 2 (lower is better)
Translates to: SQQHLGPSITRAASRGFGPGNKV*FLSAIR
Trigger: TCTGATTGCAGAGAGAAAGCACACCTTATTTCCAGG...TCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGACAATCTCAGCTCACTaGAACCTCCGCCTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLTISAH*NLRLRG
Trigger: GCCTCGGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GGGTATGACAGTTGTCTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTGGAGAGGACACTCTCATTaGCATCTTGGTTTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GYDSCLKQSLPLIPERVWRGHSH*HLGFGG
Trigger: GCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCT...CCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATACCGAGCTGGGACAACAGGTaGGTGCCACCATCACTGGCT +
Preference number: 2 (lower is better)
Translates to: SQKSMLNGCFNTGKCVIPSWDNR*VPPSLA
Trigger: AGCCAGTGATGGTGGCACGCACCTGTTGTCCCAGCT...CGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATACCGCTGGTCTTGAACTCCTaGCCTCATGATCCGCCTCCT +
Preference number: 2 (lower is better)
Translates to: SQKSMLNGCFNTGKCVIPLVLNS*PHDPPP
Trigger: AGGAGGCGGATCATGAGGTCAGGAGTTCAAGACCAG...CGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATACCGATGATGTGTTGGCTGTaGCTGGACAGCATCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SQKSMLNGCFNTGKCVIPMMCWL*LDSIPP
Trigger: GGGAGGGATGCTGTCCAGTCACAGCCAACACATCAT...CGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCGATTCTTGGATCTTGTaGAAGAAAGAATTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCDSWIL*KKELSP
Trigger: TGGACTCAATTCTTTCTTGCACAAGATCCAAGAATC...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCTTGCCACTGATCTCTTTGCCATCTTGGTTTTaGTGGCATTTGGCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: SRQVCAKTFMWSSLPLISLPSWF*WHLAGF
Trigger: GAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAA...AGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TCCCAGCAGCATTTGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTTTTGGACTCTCTCTCTCTCTCTaGAAATACTATTACTACTGC +
Preference number: 2 (lower is better)
Translates to: SQQHLGPSITRAASRGFGLSLSL*KYYYYC
Trigger: GCAGTAGTAATAGTATTTCCAGAGAGAGAGAGAGAG...TCCAAAACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATGCAAGCAGAAGACACTaGTGGAAATGGCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LLTRCGILSKLPNISSVNASRRH*WKWPCC
Trigger: GCAGCAGGGCCATTTCCACCAGTGTCTTCTGCTTGC...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp CCAGAAAGGGTCTGGATCCAGACGCCAAGAGAGGATTCTTGGATCTaGTGCAAGAAAGAATTGAGTCCATACAGCAAAGTGAAAACAAGT +
Preference number: 2 (lower is better)
Translates to: PERVWIQTPREDSWI*CKKELSPYSKVKTS
Trigger: ACTTGTTTTCACTTTGCTGTATGGACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GAATGTCTTAACCTCCTGGGATTGCAGCCTAGTAGGTCTCAGCTTCATTTTACAGGTGTGCTTTCTCTCTaGAATCAGATGACAATGGGA +
Preference number: 2 (lower is better)
Translates to: ECLNLLGLQPSRSQLHFTGVLSL*NQMTMG
Trigger: TCCCATTGTCATCTGATTGCAGAGAGAAAGCACACC...TGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCCTACAAAATGTGATTTaGAAGCCAACTTATGTCCTT +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCLQNVI*KPTYVL
Trigger: AAGGACATAAGTTGGCTTGCAAATCACATTTTGTAG...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GCTGAGAATGTACATTCAAGAACTAGCCTGAGACCTACCTCCCCCAAGAAACCTTACAGGTTTGGGATATaGACATTTTGTTTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: AENVHSRTSLRPTSPKKPYRFGI*TFCFAS
Trigger: GCTGGCAAAACAAAATGTGCATATCCCAAACCTGTA...AGGTTTCTTGGGGGAGGTAGGTCTCAGGCTAGTTCTTGAATGTACATTCTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCTTACTTGCTTGTTACTaGATGTTGCTGATTCATACT +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCLLACY*MLLIHT
Trigger: AGTATGAATCAGCAACATGCAGTAACAAGCAAGTAA...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATACCGCTATCATGGCACTGGTaGGAGTGTAGCAGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: SQKSMLNGCFNTGKCVIPLSWHW*ECSSED
Trigger: GTCCTCACTGCTACACTCCCACCAGTGCCATGATAG...CGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCGAGCATAAACAAGGCTaGGTCTTTATTGTTCATATT +
Preference number: 2 (lower is better)
Translates to: CAPSISCQPDLPELGSLCEHKQG*VFIVHI
Trigger: AATATGAACAATAAAGACCCAGCCTTGTTTATGCTC...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp GAAAGACACGAAGCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTaGAATCCGCTATTTAGAACTGAGAGAGACAGTACAATTTACATG +
Preference number: 2 (lower is better)
Translates to: ERHEAEFYCASQEAG*NPLFRTERDSTIYM
Trigger: CATGTAAATTGTACTGTCTCTCTCAGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGCTTCGTGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAACTCTCTGCAATCAGATaGCAATGGGAAGAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: NVSMGCTSPILGKERGTKLSAIR*QWEESD
Trigger: GTCAGACTCTTCCCATTGTCATCTGATTGCAGAGAG...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375258.8
ENST00000447486.5
ENST00000612742.4
3UTR-3UTR TCA 90 bp CTATTTTTCTTACCCTCTGTAGGCACTCACACGCAGAACTATTATTACTTGCTTCTTGCCACTGATCTCTaGCCTCACTCCATTCCATTC +
Preference number: 2 (lower is better)
Translates to: LFFLPSVGTHTQNYYYLLLATDL*PHSIPF
Trigger: GAATGGAATGGAGTGAGGTCAGAGATCAGTGGCAAG...AAGCAAGTAATAATAGTTCTGCGTGTGAGTGCCTACAGAGGGTAAGAAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp AGCTTGATAATTGTACTTTTGAGGACTTGCCATCAAGGCAAGTTTGTGCAAAAAGGTCTTCCTTGCCACTaGTCTCTGACCTCACTCCAT +
Preference number: 2 (lower is better)
Translates to: SLIIVLLRTCHQGKFVQKGLPCH*SLTSLH
Trigger: ATGGAGTGAGGTCAGAGATCAGTGGCAAGGAAGACC...TTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACAATTATCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATAGACACAAGGAGATCTaGTGGGGTTCCCATAGCAAC +
Preference number: 2 (lower is better)
Translates to: LLTRCGILSKLPNISSVNRHKEI*WGSHSN
Trigger: GTTGCTATGGGAACCCCAGCAGATCTCCTTGTGTCT...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp AGCTTGATAATTGTACTTTTGAGGACTTGCCATCAAGGCAAGTTTGTGCAAAAACTATCATGGCACTGGTaGGAGTGTAGCAGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: SLIIVLLRTCHQGKFVQKLSWHW*ECSSED
Trigger: GTCCTCACTGCTACACTCCCACCAGTGCCATGATAG...TTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACAATTATCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp GGGTATGACAGTTGTCTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTGGGTAAAACATAAAGAATaGCTACTCCATAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: GYDSCLKQSLPLIPERVWVKHKE*LLHRQS
Trigger: GCTCTGCCTATGGAGTAGCCATTCTTTATGTTTTAC...CCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGCTCTCTGCAATCAGATaGCAATGGGAAGAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMLSAIR*QWEESD
Trigger: GTCAGACTCTTCCCATTGTCATCTGATTGCAGAGAG...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375258.8
ENST00000447486.5
ENST00000612742.4
3UTR-3UTR TCA 90 bp GGCTCCAGTTCAGAGACTAGAAGTCATACACCTGCTAGTCTAGGTTATCTACAAAGTCCCTATTCAAGATaGAGTTGCTCTGGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: GSSSETRSHTPASLGYLQSPYSR*SCSGSK
Trigger: TTTTGAACCAGAGCAACTTCATCTTGAATAGGGACT...TTGTAGATAACCTAGACTAGCAGGTGTATGACTTCTAGTCTCTGAACTGGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CTATTTTTCTTACCCTCTGTAGGCACTCACACGCAGAACTATTATTACTTGCTTAGAGGACACTCTCATTaGCATCTTGGTTTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LFFLPSVGTHTQNYYYLLRGHSH*HLGFGG
Trigger: GCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCT...AAGCAAGTAATAATAGTTCTGCGTGTGAGTGCCTACAGAGGGTAAGAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CCAGCTGTACTCTATTTATGCTCCCTGAAGAGCATAAACAAGGCTGGGTCTTTACCAAGGGCTACTGGTTaGCCATTTTTAAGGTTATTT +
Preference number: 2 (lower is better)
Translates to: PAVLYLCSLKSINKAGSLPRATG*PFLRLF
Trigger: AAATAACCTTAAAAATGGGCAACCAGTAGCCCTTGG...TAAAGACCCAGCCTTGTTTATGCTCTTCAGGGAGCATAAATAGAGTACAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGGCGAGCCATTGCACCTaGCCTAACAACTTGTATATC +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLASHCT*PNNLYI
Trigger: GATATACAAGTTGTTAGGCCAGGTGCAATGGCTCGC...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGCTCTCATTGCCATCTTaGTTTTGGTGGCATTTGGCC +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLLSLPS*FWWHLA
Trigger: GGCCAAATGCCACCAAAACCAAGATGGCAATGAGAG...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp CCAGCTGTACTCTATTTATGCTCCCTGAAGAGCATAAACAAGGCTGGGTCTTTAGTAAAACATAAAGAATaGCTACTCCATAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PAVLYLCSLKSINKAGSLVKHKE*LLHRQS
Trigger: GCTCTGCCTATGGAGTAGCCATTCTTTATGTTTTAC...TAAAGACCCAGCCTTGTTTATGCTCTTCAGGGAGCATAAATAGAGTACAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp CTATTTTTCTTACCCTCTGTAGGCACTCACACGCAGAACTATTATTACTTGCTTCACAAGGAGATCTGCTaGGGTTCCCATAGCAACATT +
Preference number: 2 (lower is better)
Translates to: LFFLPSVGTHTQNYYYLLHKEIC*GSHSNI
Trigger: AATGTTGCTATGGGAACCCCAGCAGATCTCCTTGTG...AAGCAAGTAATAATAGTTCTGCGTGTGAGTGCCTACAGAGGGTAAGAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp CTATTTTTCTTACCCTCTGTAGGCACTCACACGCAGAACTATTATTACTTGCTTTTTCCCAGCAGCATTTaGGCCCATCCATTACAAGAG +
Preference number: 2 (lower is better)
Translates to: LFFLPSVGTHTQNYYYLLFPSSI*AHPLQE
Trigger: CTCTTGTAATGGATGGGCCCAAATGCTGCTGGGAAA...AAGCAAGTAATAATAGTTCTGCGTGTGAGTGCCTACAGAGGGTAAGAAAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp TCTATTTATATTTATAACTACACCAAAGCCATCTTGCGGGTACCTTaGCGCCTCTCAAATCCCCAACCATATTCCAAGAAACCGTATTCC +
Preference number: 2 (lower is better)
Translates to: SIYIYNYTKAILRVP*RLSNPQPYSKKPYS
Trigger: GGAATACGGTTTCTTGGAATATGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAATATAAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGTTCCATTCCAGGAAGTaGAATTTCCTTCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLFHSRK*NFLPLQ
Trigger: CTGGAGTGGAAGGAAATTTCACTTCCTGGAATGGAA...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGGGTGTGCTTTCTCTCTaGAATCAGATGACAATGGGA +
Preference number: 2 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMGVLSL*NQMTMG
Trigger: TCCCATTGTCATCTGATTGCAGAGAGAAAGCACACC...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375258.8
ENST00000447486.5
ENST00000612742.4
3UTR-3UTR GCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAACCTGGAAATAAGGTGTaGTTTCTCTCTGCAATCAGA +
Preference number: 2 (lower is better)
Translates to: NVSMGCTSPILGKERGTKPGNKV*FLSAIR
Trigger: TCTGATTGCAGAGAGAAAGCACACCTTATTTCCAGG...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375258.8
ENST00000447486.5
ENST00000612742.4
3UTR-3UTR CCA 90 bp GAATGTCTTAACCTCCTGGGATTGCAGCCTAGTAGGTCTCAGCTTCATTTTACAAAAATAATGTCAGCATaGGCTGTACTTCCCCAATTT +
Preference number: 2 (lower is better)
Translates to: ECLNLLGLQPSRSQLHFTKIMSA*AVLPQF
Trigger: AAATTGGGGAAGTACAGCCCATGCTGACATTATTTT...TGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp AGCTTGATAATTGTACTTTTGAGGACTTGCCATCAAGGCAAGTTTGTGCAAAAAGCGAGCCATTGCACCTaGCCTAACAACTTGTATATC +
Preference number: 2 (lower is better)
Translates to: SLIIVLLRTCHQGKFVQKASHCT*PNNLYI
Trigger: GATATACAAGTTGTTAGGCCAGGTGCAATGGCTCGC...TTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACAATTATCAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp TCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCTTGCCACTGATCTCTCTAAAGCTGGACCAATaGTATTCTTCTAGAAATTGG +
Preference number: 2 (lower is better)
Translates to: SRQVCAKTFMWSSLPLISLKLDQ*YSSRNW
Trigger: CCAATTTCTAGAAGAATATCATTGGTCCAGCTTTAG...AGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR TCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGCTTCTCACCATCTGCTaGGAATGTACATTCAAGAAC +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLLLTIC*ECTFKN
Trigger: GTTCTTGAATGTACATTCTCAGCAGATGGTGAGAAG...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATGCAAAAACCTTTATGTaGTCTTCCTTGCCACTGATC +
Preference number: 2 (lower is better)
Translates to: LLTRCGILSKLPNISSVNAKTFM*SSLPLI
Trigger: GATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGC...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp ATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTaGGGGTTTAACAATCCAGATGGTTCTGATAGCTTTAAGTTTTGC +
Preference number: 2 (lower is better)
Translates to: MCDLFRLQDFDELEV*GFNNPDGSDSFKFC
Trigger: GCAAAACTTAAAGCTATCAGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp GAAGTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTaGGAAGTTTTGGGGTTTAACAATCCAGATGGTTCTGATAGCTTT +
Preference number: 2 (lower is better)
Translates to: EVTMCDLFRLQDFDE*EVLGFNNPDGSDSF
Trigger: AAAGCTATCAGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCCTTGCCACTGATCTCTCTACAAAATGTGATTTaGAAGCCAACTTATGTCCTT +
Preference number: 2 (lower is better)
Translates to: SRQVCAKTFMWSSLPLISLQNVI*KPTYVL
Trigger: AAGGACATAAGTTGGCTTGCAAATCACATTTTGTAG...AGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp CTATTTTTCTTACCCTCTGTAGGCACTCACACGCAGAACTATTATTACTTGCTTTACAGGTTTGGGATATaGACATTTTGTTTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: LFFLPSVGTHTQNYYYLLYRFGI*TFCFAS
Trigger: GCTGGCAAAACAAAATGTGCATATCCCAAACCTGTA...AAGCAAGTAATAATAGTTCTGCGTGTGAGTGCCTACAGAGGGTAAGAAAAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAAAAATAATGTCAGCATaGGCTGTACTTCCCCAATTT +
Preference number: 2 (lower is better)
Translates to: NVSMGCTSPILGKERGTKKIMSA*AVLPQF
Trigger: AAATTGGGGAAGTACAGCCCATGCTGACATTATTTT...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000375258.8
ENST00000447486.5
ENST00000612742.4
3UTR-3UTR CCA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGGCAGCTATCTGCATATaGGTGAATTTTCACGTACAA +
Preference number: 2 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLAAICI*VNFHVQ
Trigger: TTGTACGTGAAAATTCACCCATATGCAGATAGCTGC...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp AAGTTCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATGTACTTTTGAGGACTTaGCATCAAGGCAAGTTTGTG +
Preference number: 2 (lower is better)
Translates to: KFSEVNVKWVFQYRQMCHVLLRT*HQGKFV
Trigger: CACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTAC...ATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp TATGCATGTTTAAACAGAAAGCTTGATAATTGTACTTTTGAGGACTaGCCATCAAGGCAAGTTTGTGCAAAAACCTTTATGTGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: YACLNRKLDNCTFED*PSRQVCAKTFMWSS
Trigger: GGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACAATTATCAAGCTTTCTGTTTAAACATGCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 90 bp TTCCATGGAAAGATACTGTCTTTCTTACAATGTCTCATAAAACCTTaGAAAAAGTCACTGTTGCTGGAATACTGTGTGTACTGCCTTGTA +
Preference number: 2 (lower is better)
Translates to: FHGKILSFLQCLIKP*KKSLLLEYCVYCLV
Trigger: TACAAGGCAGTACACACAGTATTCCAGCAACAGTGACTTTTTCAAAGGTTTTATGAGACATTGTAAGAAAGACAGTATCTTTCCATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR GCA 90 bp TTATGCTCCCTGAAGAGCATAAACAAGGCTGGGTCTTTATTGTTCATATTATTCGATTCTTGGATCTTGTaGAAGAAAGAATTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: LCSLKSINKAGSLLFILFDSWIL*KKELSP
Trigger: TGGACTCAATTCTTTCTTGCACAAGATCCAAGAATC...GAATAATATGAACAATAAAGACCCAGCCTTGTTTATGCTCTTCAGGGAGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp GACCAGGCAAGCAGAAGACACTGGTGGAAATGGCCCTaGTGCGCAGCCATGTGGAATAGGAAGGCTATGCTG +
Preference number: 3 (lower is better)
Translates to: DQASRRHWWKWP*CAAMWNRKAML
Trigger: CAGCATAGCCTTCCTATTCCACATGGCTGCGCAGCAGGGCCATTTCCACCAGTGTCTTCTGCTTGCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp CTCCAGGGGCAGCTGAGGGTGGGCTGTCTGACCATCTaGAGATTTCAGTGTGCTCCATCCATCTCATGCCAA +
Preference number: 3 (lower is better)
Translates to: LQGQLRVGCLTI*RFQCAPSISCQ
Trigger: TTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACAGCCCACCCTCAGCTGCCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGTCCTTCCACTCCAGGTaGGAGTGCAGTGGTGCGATC +
Preference number: 3 (lower is better)
Translates to: PSGDFSVLHPSHANLTCQSFHSR*ECSGAI
Trigger: GATCGCACCACTGCACTCCAACCTGGAGTGGAAGGA...CTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp AGAGACAGAAAGACTGACCAGGCAAGCAGAAGACACTaGTGGAAATGGCCCTGCTGCGCAGCCATGTGGAAT +
Preference number: 3 (lower is better)
Translates to: RDRKTDQASRRH*WKWPCCAAMWN
Trigger: ATTCCACATGGCTGCGCAGCAGGGCCATTTCCACCAGTGTCTTCTGCTTGCCTGGTCAGTCTTTCTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp GACAGCCAGAGGACACTCTCATTGCCATCTTGGTTTTaGTGGCATTTGGCCGGCTTCTTCACTGCAACCTGT +
Preference number: 3 (lower is better)
Translates to: DSQRTLSLPSWF*WHLAGFFTATC
Trigger: ACAGGTTGCAGTGAAGAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp AGCTCTTTCTTCCCTGGTGCCTTTCCCAGCAGCATTTaGGCCCATCCATTACAAGAGCAGCAAGTAGAGGTT +
Preference number: 3 (lower is better)
Translates to: SSFFPGAFPSSI*AHPLQEQQVEV
Trigger: AACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGAAAGGCACCAGGGAAGAAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp ACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATaGCAACCTGACTTGCCAGAATTAGGGTCACTGTGC +
Preference number: 3 (lower is better)
Translates to: TIWRFQCAPSIS*QPDLPELGSLC
Trigger: GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp AAGCTAGAGTACAGCAACGACTTAGAATCACACACGGGTAGAAACCGGGACGTGACTCTCATTGCCATCTaGGTTTTGGTGGCATTTGGC +
Preference number: 3 (lower is better)
Translates to: KLEYSNDLESHTGRNRDVTLIAI*VLVAFG
Trigger: GCCAAATGCCACCAAAACCAAGATGGCAATGAGAGT...CACGTCCCGGTTTCTACCCGTGTGTGATTCTAAGTCGTTGCTGTACTCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACACTCTCATTGCCATCTaGGTTTTGGTGGCATTTGGC +
Preference number: 3 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDTLIAI*VLVAFG
Trigger: GCCAAATGCCACCAAAACCAAGATGGCAATGAGAGT...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCTACCTTCTGTTGTTTTaGAAACCACCTTGGGCCATG +
Preference number: 3 (lower is better)
Translates to: CAPSISCQPDLPELGSLCYLLLF*KPPWAM
Trigger: CATGGCCCAAGGTGGTTTCAAAAACAACAGAAGGTA...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp GACCCAGATCACTGGGATGCCAAGGACACAGCTAGCTaGACACTATTTGAAGTCTATGTGCTCAAGTATTGC +
Preference number: 3 (lower is better)
Translates to: DPDHWDAKDTAS*TLFEVYVLKYC
Trigger: GCAATACTTGAGCACATAGACTTCAAATAGTGTCCAGCTAGCTGTGTCCTTGGCATCCCAGTGATCTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGTGTACTTTTGAGGACTaGCCATCAAGGCAAGTTTGT +
Preference number: 3 (lower is better)
Translates to: PSGDFSVLHPSHANLTCQCTFED*PSRQVC
Trigger: ACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACA...CTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp GGCTCCAGTTCAGAGACTAGAAGTCATACACCTGCTAGTCTAGGTTATCTACAACAGAGGACACTCTCATaGCCATCTTGGTTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: GSSSETRSHTPASLGYLQQRTLS*PSWFWW
Trigger: CCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTG...TTGTAGATAACCTAGACTAGCAGGTGTATGACTTCTAGTCTCTGAACTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp AGGAGATCTGCTGGGGTTCCCATAGCAACATTAACTTATCTAAACTGCCCTTGCTTTATGTGGTCTTCCTaGCCACTGATCTCTGACCTC +
Preference number: 3 (lower is better)
Translates to: RRSAGVPIATLTYLNCPCFMWSS*PLISDL
Trigger: GAGGTCAGAGATCAGTGGCAAGGAAGACCACATAAA...GCAAGGGCAGTTTAGATAAGTTAATGTTGCTATGGGAACCCCAGCAGATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp TTGGGTATGACAGTTGTCTTAAACAGAGCTTACCACTaGTACCAGAAAGGGTCTGGATCCAGACGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: LGMTVVLNRAYH*YQKGSGSRRQE
Trigger: CTCTTGGCGTCTGGATCCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp CACCATCTGCTGAGAATGTACATTCAAGAACTAGCCTaGGACCTACCTCCCCCAAGAAACCTGATTCTTCTC +
Preference number: 3 (lower is better)
Translates to: HHLLRMYIQELA*DLPPPRNLILL
Trigger: GAGAAGAATCAGGTTTCTTGGGGGAGGTAGGTCTCAGGCTAGTTCTTGAATGTACATTCTCAGCAGATGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp TTGCCCATTCTGGTGGCATCATCAATTAAGCTGCCCTaGCCCAGCCTGTTAAGAGATGAACCAATGACTAAA +
Preference number: 3 (lower is better)
Translates to: LPILVASSIKLP*PSLLRDEPMTK
Trigger: TTTAGTCATTGGTTCATCTCTTAACAGGCTGGGGCAGGGCAGCTTAATTGATGATGCCACCAGAATGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp GAAAGGGTCTGGATCCAGACGCCAAGAGAGGATTCTTaGATCTTGTGCAAGAAAGAATTGAGTCCATACAGC +
Preference number: 3 (lower is better)
Translates to: ERVWIQTPREDS*ILCKKELSPYS
Trigger: GCTGTATGGACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp CTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTaGATCCAGACGCCAAGAGAGGATTCTTGGATCTTG +
Preference number: 3 (lower is better)
Translates to: LKQSLPLIPERV*IQTPREDSWIL
Trigger: CAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACCTAATTTTTGTATTCTaGGGAGAGACAGGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDLIFVF*GETGFC
Trigger: GCAAAACCCTGTCTCTCCCAAGAATACAAAAATTAG...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp GGGTATGACAGTTGTCTTAAACAGAGCTTACCACTGATACCAGAAAGGGTCTGGCCCAAGGGCTACTGGTaGCCCATTTTTAAGGTTATT +
Preference number: 3 (lower is better)
Translates to: GYDSCLKQSLPLIPERVWPKGYW*PIFKVI
Trigger: AATAACCTTAAAAATGGGCAACCAGTAGCCCTTGGG...CCAGACCCTTTCTGGTATCAGTGGTAAGCTCTGTTTAAGACAACTGTCATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp ACTGCGCCCGGCCCTCGAGGGGATAAATACATTTTTAACTGCCACAATTTAAGACCCAAGGGCTACTGGTaGCCCATTTTTAAGGTTATT +
Preference number: 3 (lower is better)
Translates to: TAPGPRGDKYIFNCHNLRPKGYW*PIFKVI
Trigger: AATAACCTTAAAAATGGGCAACCAGTAGCCCTTGGG...TCTTAAATTGTGGCAGTTAAAAATGTATTTATCCCCTCGAGGGCCGGGCGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TGTGCTCCATCCATCTCATGCCAACCTGACTTGCCAGAATTAGGGTCACTGTGCATAGAAACTGTTATCTaGACTTTCTCACAACCTTCG +
Preference number: 3 (lower is better)
Translates to: CAPSISCQPDLPELGSLCIETVI*TFSQPS
Trigger: CGAAGGTTGTGAGAAAGTCAAGATAACAGTTTCTAT...GCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TGTCTGACCATCTGGAGATTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACGATGAGTTGGAAGTTTaGGGGTTTAACAATCCAGAT +
Preference number: 3 (lower is better)
Translates to: CLTIWRFQCAPSISCQPDDELEV*GFNNPD
Trigger: ATCTGGATTGTTAAACCCCAAAACTTCCAACTCATC...GTCAGGTTGGCATGAGATGGATGGAGCACACTGAAATCTCCAGATGGTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp TTGCCATCAAGGCAAGTTTGTGCAAAAACCTTTATGTaGTCTTCCTTGCCACTGATCTCTGACCTCACTCCA +
Preference number: 3 (lower is better)
Translates to: LPSRQVCAKTFM*SSLPLISDLTP
Trigger: TGGAGTGAGGTCAGAGATCAGTGGCAAGGAAGACCACATAAAGGTTTTTGCACAAACTTGCCTTGATGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp AGAGCAGCAAGTAGAGGTTTTGGAATCAGAGAGTTCTaGGTCCGAGTTGTGACTCTGCTACTTACTAGATGT +
Preference number: 3 (lower is better)
Translates to: RAASRGFGIREF*VRVVTLLLTRC
Trigger: ACATCTAGTAAGTAGCAGAGTCACAACTCGGACCCAGAACTCTCTGATTCCAAAACCTCTACTTGCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp AAGCCGAATTTTACTGTGCCAGTCAAGAGGCTGGCTTaGATCCGCTATTTAGAACTGAGAGAGACAGTACAA +
Preference number: 3 (lower is better)
Translates to: KPNFTVPVKRLA*IRYLELRETVQ
Trigger: TTGTACTGTCTCTCTCAGTTCTAAATAGCGGATTCAAGCCAGCCTCTTGACTGGCACAGTAAAATTCGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp CATCCTGTGACTAAGAATGTCTTAACCTCCTGGGATTaGAGCCTAGTAGGTCTCAGCTTCATTTTACACAGT +
Preference number: 3 (lower is better)
Translates to: HPVTKNVLTSWD*SLVGLSFILHS
Trigger: ACTGTGTAAAATGAAGCTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAGACATTCTTAGTCACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp TTTATAACTACACCAAAGCCATCTTGCGGGTACCTTTaGGCCTCTCAAATCCCCAACCATATTCCAAGAAAC +
Preference number: 3 (lower is better)
Translates to: FITTPKPSCGYL*ASQIPNHIPRN
Trigger: GTTTCTTGGAATATGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TTATGCTCCCTGAAGAGCATAAACAAGGCTGGGTCTTTATTGTTCATATTATTCCTTAACCTCCTGGGATaGCAGCCTAGTAGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: LCSLKSINKAGSLLFILFLNLLG*QPSRSQ
Trigger: CTGAGACCTACTAGGCTGCAATCCCAGGAGGTTAAG...GAATAATATGAACAATAAAGACCCAGCCTTGTTTATGCTCTTCAGGGAGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGCAGAGGACACTCTCATaGCCATCTTGGTTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLQRTLS*PSWFWW
Trigger: CCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTG...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp GGCTCCAGTTCAGAGACTAGAAGTCATACACCTGCTAGTCTAGGTTATCTACAAGAGGATTCTTGGATCTaGTGCAAGAAAGAATTGAGT +
Preference number: 3 (lower is better)
Translates to: GSSSETRSHTPASLGYLQEDSWI*CKKELS
Trigger: ACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTC...TTGTAGATAACCTAGACTAGCAGGTGTATGACTTCTAGTCTCTGAACTGGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATCTGCTATATGATGTGTaGGCTGTGACTGGACAGCAT +
Preference number: 3 (lower is better)
Translates to: LLTRCGILSKLPNISSVNLLYDV*AVTGQH
Trigger: ATGCTGTCCAGTCACAGCCAACACATCATATAGCAG...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp ATAGCTTTAAGTTTTGCCTCCAAGAGGGCAGCTATCTaGATATGGGTGAATTTTCACGTACAAGCTAGAGTA +
Preference number: 3 (lower is better)
Translates to: IALSFASKRAAI*IWVNFHVQARV
Trigger: TACTCTAGCTTGTACGTGAAAATTCACCCATATGCAGATAGCTGCCCTCTTGGAGGCAAAACTTAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR GCA 72 bp CTTCTATTTATATTTATAACTACACCAAAGCCATCTTaGGGGTACCTTTGCGCCTCTCAAATCCCCAACCAT +
Preference number: 3 (lower is better)
Translates to: LLFIFITTPKPS*GYLCASQIPNH
Trigger: ATGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAATATAAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp GCCATGATTTTTAAACGGAGACACAAGGAGATCTGCTaGGGTTCCCATAGCAACATTAACTTATCTAAACTG +
Preference number: 3 (lower is better)
Translates to: AMIFKRRHKEIC*GSHSNINLSKL
Trigger: CAGTTTAGATAAGTTAATGTTGCTATGGGAACCCCAGCAGATCTCCTTGTGTCTCCGTTTAAAAATCATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp TGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTaGAAGTTTTGGGGTTTAACAATCCAGATGGTTCTG +
Preference number: 3 (lower is better)
Translates to: CVIYSGFRTLMS*KFWGLTIQMVL
Trigger: CAGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp ATGCTCCCTGAAGAGCATAAACAAGGCTGGGTCTTTATTGTTCATATTATTCCAGCCAAGAGAGGATTCTaGGATCTTGTGCAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: MLPEEHKQGWVFIVHIIPAKRGF*DLVQER
Trigger: TCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGC...TGGAATAATATGAACAATAAAGACCCAGCCTTGTTTATGCTCTTCAGGGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATCTATTCAAGATGAAGTaGCTCTGGTTCAAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: LLTRCGILSKLPNISSVNLFKMK*LWFKSP
Trigger: AGGGCTTTTGAACCAGAGCAACTTCATCTTGAATAG...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp GTAACAATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTGCTATTCAAGATGAAGTaGCTCTGGTTCAAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: VTMCDLFRLQDFDELEVLLFKMK*LWFKSP
Trigger: AGGGCTTTTGAACCAGAGCAACTTCATCTTGAATAG...CAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACATTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATGCCATCAAGGCAAGTTaGTGCAAAAACCTTTATGTG +
Preference number: 3 (lower is better)
Translates to: LLTRCGILSKLPNISSVNAIKAS*CKNLYV
Trigger: CACATAAAGGTTTTTGCACAAACTTGCCTTGATGGC...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp CTACTTACTAGATGTGGTATCCTGAGCAAGTTACCCAACATCTCTTCTGTAAATCCCAAGCAGTTACATTaGCAACGCTTCATGATTTCT +
Preference number: 3 (lower is better)
Translates to: LLTRCGILSKLPNISSVNPKQLH*QRFMIS
Trigger: AGAAATCATGAAGCGTTGCAAATGTAACTGCTTGGG...ATTTACAGAAGAGATGTTGGGTAACTTGCTCAGGATACCACATCTAGTAAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp AAGGGCTACTGGTTGCCCATTTTTAAGGTTATTTCTTaGTTATATGCTACACAAGGGGTGGATTATTCAGGC +
Preference number: 3 (lower is better)
Translates to: KGYWLPIFKVIS*LYATQGVDYSG
Trigger: GCCTGAATAATCCACCCCTTGTGTAGCATATAATCAAGAAATAACCTTAAAAATGGGCAACCAGTAGCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp GAACTAGGCAGAAGCAGAATGCTGAAAAGAACTGATTaGAAGCTTTTTGCTTTGTCATTCCTCTCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: ELGRSRMLKRTD*KLFALSFLSVP
Trigger: AGGAACTGAGAGGAATGACAAAGCAAAAAGCTTTCAATCAGTTCTTTTCAGCATTCTGCTTCTGCCTAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp TCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATACCGCTAATTTTTGTATTCTaGGGAGAGACAGGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: SQKSMLNGCFNTGKCVIPLIFVF*GETGFC
Trigger: GCAAAACCCTGTCTCTCCCAAGAATACAAAAATTAG...CGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR TCA 72 bp TCTCTCAATACATTTATAAGACACCATATCTCAAACTaGTCTCAGATGGCTCCAGTTCAGAGACTAGAAGTC +
Preference number: 3 (lower is better)
Translates to: SLNTFIRHHISN*SQMAPVQRLEV
Trigger: GACTTCTAGTCTCTGAACTGGAGCCATCTGAGATCAGTTTGAGATATGGTGTCTTATAAATGTATTGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp TATTCAGGCTTCAGGACTTTGATGAGTTGGAAGTTTTaGGGTTTAACAATCCAGATGGTTCTGATAGCTTTA +
Preference number: 3 (lower is better)
Translates to: YSGFRTLMSWKF*GLTIQMVLIAL
Trigger: TAAAGCTATCAGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CCA 72 bp GGCAAAGCAAATAAGTTCTCAGAAGTCAATGTTAAATaGGTGTTTCAATACAGGCAAATGTGTCATACCGAA +
Preference number: 3 (lower is better)
Translates to: GKANKFSEVNVK*VFQYRQMCHTE
Trigger: TTCGGTATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGAACTTATTTGCTTTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR-3UTR CAA 90 bp AAGTTCTCAGAAGTCAATGTTAAATGGGTGTTTCAATACAGGCAAATGTGTCATATAGAAACTGTTATCTaGACTTTCTCACAACCTTCG +
Preference number: 3 (lower is better)
Translates to: KFSEVNVKWVFQYRQMCHIETVI*TFSQPS
Trigger: CGAAGGTTGTGAGAAAGTCAAGATAACAGTTTCTAT...ATGACACATTTGCCTGTATTGAAACACCCATTTAACATTGACTTCTGAGAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp GGACAGCCAGAGGACACTCTCATTGCCATCTTGGTTTaGGTGGCATTTGGCCGGCTTCTTCACTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: GQPEDTLIAILV*VAFGRLLHCNL
Trigger: CAGGTTGCAGTGAAGAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTGGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp GAGTGTAGCAGTGAGGACAGCCAGAGGACACTCTCATaGCCATCTTGGTTTTGGTGGCATTTGGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: ECSSEDSQRTLS*PSWFWWHLAGF
Trigger: GAAGCCGGCCAAATGCCACCAAAACCAAGATGGCAATGAGAGTGTCCTCTGGCTGTCCTCACTGCTACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR CCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAACACGGGACGCTGCTTTaGGGGGATCGCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKHGTLL*GDRPRH
Trigger: GTGTCGAGGGCGATCCCCCCAAAGCAGCGTCCCGTG...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp AAGCTCTTTCTTCCCTGGTGCCTTTCCCAGCAGCATTaGGGCCCATCCATTACAAGAGCAGCAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: KLFLPWCLSQQH*GPSITRAASRG
Trigger: ACCTCTACTTGCTGCTCTTGTAATGGATGGGCCCAAATGCTGCTGGGAAAGGCACCAGGGAAGAAAGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp TTTCAGTGTGCTCCATCCATCTCATGCCAACCTGACTaGCCAGAATTAGGGTCACTGTGCTCTGAGACACTT +
Preference number: 4 (lower is better)
Translates to: FQCAPSISCQPD*PELGSLCSETL
Trigger: AAGTGTCTCAGAGCACAGTGACCCTAATTCTGGCAAGTCAGGTTGGCATGAGATGGATGGAGCACACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAGCTGAGGCAGGAGGATaGCTGGAATCTGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKAEAGG*LESGRL
Trigger: CAACCTCCCAGATTCCAGTCATCCTCCTGCCTCAGC...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAACTGGTCTTGAACTCCTaGGCTCAACCGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKLVLNS*AQPICL
Trigger: CAGGCAGATCGGTTGAGCTCAGGAGTTCAAGACCAG...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR GCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGACAATCTCAGCTCACTaGAACCTCCGCCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMTISAH*NLRLRG
Trigger: GCCTCGGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAATCTGTAGGACGAGTGTaGCTTTACGAGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKSVGRV*LYELHS
Trigger: GCTGTGGAGCTCGTAAAGTCACACTCGTCCTACAGA...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAATTAGACCACTGCATGTaGTCCCTGTGGTCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKLDHCM*SLWSQL
Trigger: AAGCTGGGACCACAGGGATCACATGCAGTGGTCTAA...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp GTCTGGATCCAGACGCCAAGAGAGGATTCTTGGATCTaGTGCAAGAAAGAATTGAGTCCATACAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VWIQTPREDSWI*CKKELSPYSKV
Trigger: CACTTTGCTGTATGGACTCAATTCTTTCTTGCACAAGATCCAAGAATCCTCTCTTGGCGTCTGGATCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR GCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGACAGGTGCGAGCCATTaGACCTGGCCTAACAACTTG +
Preference number: 4 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMTGASH*TWPNNL
Trigger: CAAGTTGTTAGGCCAGGTGCAATGGCTCGCACCTGT...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAAGGTTGAAACTGCAGTaGGCCATAATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKRLKLQ*AIIAPL
Trigger: CAGTGGTGCAATTATGGCTCACTGCAGTTTCAACCT...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR CCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAGCGAGCCATTGCACCTaGCCTAACAACTTGTATATC +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKASHCT*PNNLYI
Trigger: GATATACAAGTTGTTAGGCCAGGTGCAATGGCTCGC...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp GAAGGCTATGCTGGACAGAGCCCAAAAGAGACCAGTTaGTGTCTCACAGTCCAAATTTGGTTGATGTATTTT +
Preference number: 4 (lower is better)
Translates to: EGYAGQSPKETS*CLTVQIWLMYF
Trigger: AAAATACATCAACCAAATTTGGACTGTGAGACACAAACTGGTCTCTTTTGGGCTCTGTCCAGCATAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp ATTTATAACTACACCAAAGCCATCTTGCGGGTACCTTaGCGCCTCTCAAATCCCCAACCATATTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: IYNYTKAILRVP*RLSNPQPYSKK
Trigger: TTTCTTGGAATATGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR GCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAGGTGTGCTTTCTCTCTaGAATCAGATGACAATGGGA +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKGVLSL*NQMTMG
Trigger: TCCCATTGTCATCTGATTGCAGAGAGAAAGCACACC...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp ACTTCTATTTATATTTATAACTACACCAAAGCCATCTaGCGGGTACCTTTGCGCCTCTCAAATCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: TSIYIYNYTKAI*RVPLRLSNPQP
Trigger: TGGTTGGGGATTTGAGAGGCGCAAAGGTACCCGCAAGATGGCTTTGGTGTAGTTATAAATATAAATAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAAGGACAGTGCATTCTTaGGAAACGATTTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKRTVHS*ETICST
Trigger: AGTGCTACAAATCGTTTCTCAAGAATGCACTGTCCT...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR TCA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAAGCACTAGTTTTTACATaGTCCCATGATGATTCTCTC +
Preference number: 4 (lower is better)
Translates to: NVSMGCTSPILGKERGTKALVFT*SHDDSL
Trigger: GAGAGAATCATCATGGGATCATGTAAAAACTAGTGC...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR GCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGGGCACAGTAGGACAGTaGATTCTTGAGAAACGATTT +
Preference number: 4 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMGTVGQ*ILEKRF
Trigger: AAATCGTTTCTCAAGAATGCACTGTCCTACTGTGCC...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp ATGTGTGATCTATTCAGGCTTCAGGACTTTGATGAGTaGGAAGTTTTGGGGTTTAACAATCCAGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: MCDLFRLQDFDE*EVLGFNNPDGS
Trigger: AGAACCATCTGGATTGTTAAACCCCAAAACTTCCAACTCATCAAAGTCCTGAAGCCTGAATAGATCACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS-3UTR GCA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGAATCAGATTCTGTTTTaGTTTGACCTTCTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMNQILF*FDLLKN
Trigger: GTTCTTCAGAAGGTCAAAGCAAAACAGAATCTGATT...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
3UTR CAA 72 bp TTAAACAGAAAGCTTGATAATTGTACTTTTGAGGACTaGCCATCAAGGCAAGTTTGTGCAAAAACCTTTATG +
Preference number: 4 (lower is better)
Translates to: LNRKLDNCTFED*PSRQVCAKTFM
Trigger: CATAAAGGTTTTTGCACAAACTTGCCTTGATGGCAAGTCCTCAAAAGTACAATTATCAAGCTTTCTGTTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp AATAACAATACCTCACATATATTTAATGCTCTAGAATaGACAATGCACTTTCACAAGCGGGGAAAATACCCA +
Preference number: 4 (lower is better)
Translates to: NNNTSHIFNALE*TMHFHKRGKYP
Trigger: TGGGTATTTTCCCCGCTTGTGAAAGTGCATTGTCAATTCTAGAGCATTAAATATATGTGAGGTATTGTTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
3UTR CAA 72 bp AAGATACTGTCTTTCTTACAATGTCTCATAAAACCTTaGAAAAAGTCACTGTTGCTGGAATACTGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KILSFLQCLIKP*KKSLLLEYCVY
Trigger: GTACACACAGTATTCCAGCAACAGTGACTTTTTCAAAGGTTTTATGAGACATTGTAAGAAAGACAGTATCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.8
ENST00000612742.4
CDS GCA 90 bp CATATTCATCCTAAGCAGTACCTGGGCATCCTGCGGGCGCTGGTGTaGCAGGTGACCGCCAGCCGGCCGGGGCGGGACGGAGGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: HIHPKQYLGILRALV*QVTASRPGRDGGPR
Trigger: CCGCGGCCCTCCGTCCCGCCCCGGCCGGCTGGCGGTCACCTGGCACACCAGCGCCCGCAGGATGCCCAGGTACTGCTTAGGATGAATATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442778.5
ENST00000612742.5
CDS GCA 90 bp TATCCAGGGAATGAGCAGGACTTAATTCTCATGCCGGCATGGGGCTaGCGGGCACCCAGCTCCTTTCCTGTGGGTAGAAAACAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: YPGNEQDLILMPAWG*RAPSSFPVGRKQVP
Trigger: GGGGACTTGTTTTCTACCCACAGGAAAGGAGCTGGGTGCCCGGCAGCCCCATGCCGGCATGAGAATTAAGTCCTGCTCATTCCCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 90 bp CTCACACTCAGACAGGAAACACAGACAAGGCCAATTCATCCAGCCTaGACTGAGATGTGGGAGGCAGTACCCTGGGGTACCTTTAGCACG +
Preference number: 5 (lower is better)
Translates to: LTLRQETQTRPIHPA*TEMWEAVPWGTFST
Trigger: CGTGCTAAAGGTACCCCAGGGTACTGCCTCCCACATCTCAGTGCAGGCTGGATGAATTGGCCTTGTCTGTGTTTCCTGTCTGAGTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442541.1
CDS CCA 90 bp CTTGCTTATCCAGGGAATGAGCAGGACTTAATTCTCATGCCGGCATaGGGCTGCCGGGCACCCAGCTCCTTTCCTGTGGGTAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: LAYPGNEQDLILMPA*GCRAPSSFPVGRKQ
Trigger: TTGTTTTCTACCCACAGGAAAGGAGCTGGGTGCCCGGCAGCCCCATGCCGGCATGAGAATTAAGTCCTGCTCATTCCCTGGATAAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 90 bp TCAGCCATTCTCTTTCAGGCAATTTTCAGTGCGAGTGCCAAATGCTaGTTAGGGGGATATGTCTCTGCTCACCTGAGGGAGCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: SAILFQAIFSASAKC*LGGYVSAHLREQGT
Trigger: TGTGCCCTGCTCCCTCAGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAATGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS CCA 90 bp ATTCATCCTAAGCAGTACCTAATTATTCCAGTTCAGGGTCGAGGGTaGCTGAAGCCTATCCCCTCAGCTCAGGGTGCAAGGTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: IHPKQYLIIPVQGRG*LKPIPSAQGARWEP
Trigger: TGGTTCCCACCTTGCACCCTGAGCTGAGGGGATAGGCTTCAGCCACCCTCGACCCTGAACTGGAATAATTAGGTACTGCTTAGGATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442541.1
ENST00000460539.5
CDS TCA 90 bp AACCTTGAGCTCCTGGACTCTAGCGATCTTGCTTCCTCAGCCTTCTaGGTAGCTAGGACTACAGATGTGCCTCACCATGCCCAGCTAATT +
Preference number: 5 (lower is better)
Translates to: NLELLDSSDLASSAF*VARTTDVPHHAQLI
Trigger: AATTAGCTGGGCATGGTGAGGCACATCTGTAGTCCTAGCTACTCAGAAGGCTGAGGAAGCAAGATCGCTAGAGTCCAGGAGCTCAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS GCA 90 bp ATTTCAGCCATTCTCTTTCAGGCAATTTTCAGTGCGAGTGCCAAATaGTGCTTAGGGGGATATGTCTCTGCTCACCTGAGGGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ISAILFQAIFSASAK*CLGGYVSAHLREQG
Trigger: GCCCTGCTCCCTCAGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAATGGCTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 90 bp ACTGGCAATTTCAGCCATTCTCTTTCAGGCAATTTTCAGTGCGAGTaGCAAATGCTGCTTAGGGGGATATGTCTCTGCTCACCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: TGNFSHSLSGNFQCE*QMLLRGICLCSPEG
Trigger: TCCCTCAGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAATGGCTGAAATTGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 90 bp TGTGATACTGGCAATTTCAGCCATTCTCTTTCAGGCAATTTTCAGTaGGAGTGCCAAATGCTGCTTAGGGGGATATGTCTCTGCTCACCT +
Preference number: 5 (lower is better)
Translates to: CDTGNFSHSLSGNFQ*ECQMLLRGICLCSP
Trigger: AGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAATGGCTGAAATTGCCAGTATCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 90 bp ATAACCAAAGCTTCCTTAACTTGGGAATCTTGGGAACCTAGAAAGTaGGGTAACCCAAGCCAAATTCCTCTGGTGTCACAGTTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: ITKASLTWESWEPRK*GNPSQIPLVSQFLL
Trigger: TAGGAGGAACTGTGACACCAGAGGAATTTGGCTTGGGTTACCTCACTTTCTAGGTTCCCAAGATTCCCAAGTTAAGGAAGCTTTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 90 bp GTATTTCCTTGCACTATTTGGCAAGAGAAAGAAGCACCTGGAGAGTaGGTTAGGGAGAGAAAGCATGGAAGAAATGTGAGTAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: VFPCTIWQEKEAPGE*VRERKHGRNVSKTR
Trigger: CCTTGTTTTACTCACATTTCTTCCATGCTTTCTCTCCCTAACTCACTCTCCAGGTGCTTCTTTCTCTTGCCAAATAGTGCAAGGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS-3UTR CAA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAATCTCTCATACTTAACTaGCTCTTCCAGAAGGACTCG +
Preference number: 5 (lower is better)
Translates to: NVSMGCTSPILGKERGTKSLILN*LFQKDS
Trigger: CGAGTCCTTCTGGAAGAGCAAGTTAAGTATGAGAGA...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS TCA 90 bp CAGCAAAGAGGTAATTCTTTATTCTCGAGAGCTTCCTCGTGCACATaGTCAGCTTTTGCACATGCTTGGAGGAAAAACAACACTATTAAA +
Preference number: 5 (lower is better)
Translates to: QQRGNSLFSRASSCT*SAFAHAWRKNNTIK
Trigger: TTTAATAGTGTTGTTTTTCCTCCAAGCATGTGCAAAAGCTGATCATGTGCACGAGGAAGCTCTCGAGAATAAAGAATTACCTCTTTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS-3UTR CAA 90 bp AATGTCAGCATGGGCTGTACTTCCCCAATTTTAGGAAAGGAAAGAGGAACTAAACTTCTCTTCAGGTTTTaGATCAACTGGAAGAATTTC +
Preference number: 5 (lower is better)
Translates to: NVSMGCTSPILGKERGTKLLFRF*INWKNF
Trigger: GAAATTCTTCCAGTTGATCAAAAACCTGAAGAGAAG...TTTAGTTCCTCTTTCCTTTCCTAAAATTGGGGAAGTACAGCCCATGCTGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS-3UTR CAA 90 bp GCCATTGCACCTGGCCTAACAACTTGTATATCTAAGAATAGCCTGAAAATAATGCTAATTTTTGTATTCTaGGGAGAGACAGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: AIAPGLTTCISKNSLKIMLIFVF*GETGFC
Trigger: GCAAAACCCTGTCTCTCCCAAGAATACAAAAATTAG...CATTATTTTCAGGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447486.5
CDS TCA 90 bp AATTGGACTCTTCTTAACTTAAATATGTTCTGTTTGGCCTTTATCTaGAATTCAGTAATGATGGCTGGACCATGGTTACTTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: NWTLLNLNMFCLAFI*NSVMMAGPWLLKAA
Trigger: GGCTGCCTTAAGTAACCATGGTCCAGCCATCATTACTGAATTTCAGATAAAGGCCAAACAGAACATATTTAAGTTAAGAAGAGTCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS GCA 90 bp ATACTCCTCTTGATTATACTGTGTATGCTGGTATCAAATAATCCTTaGATCATGTTGCTTAGTACCATGTCTGAACTACAGAAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: ILLLIILCMLVSNNP*IMLLSTMSELQKEV
Trigger: GACCTCTTTCTGTAGTTCAGACATGGTACTAAGCAACATGATGCAAGGATTATTTGATACCAGCATACACAGTATAATCAAGAGGAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS TCA 72 bp GATCCCTGGGCATCCTGCGGGCGCTGGTGTGCCAGGTaGCCGCCAGCCGGCCGGGGCGGGACGGAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: DPWASCGRWCAR*PPAGRGGTEGR
Trigger: GCGGCCCTCCGTCCCGCCCCGGCCGGCTGGCGGTCACCTGGCACACCAGCGCCCGCAGGATGCCCAGGGATC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460188.5
ENST00000462821.1
CDS TCA 72 bp AGTACCTGGGCATCCTGCGGGCGCTGGTGTGCCAGGTaGCCGCCAGCCGGCCGGGGCGGGACGGAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: STWASCGRWCAR*PPAGRGGTEGR
Trigger: GCGGCCCTCCGTCCCGCCCCGGCCGGCTGGCGGTCACCTGGCACACCAGCGCCCGCAGGATGCCCAGGTACT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442778.5
ENST00000612742.5
CDS TCA 72 bp TGTTTCTGGGCATCCTGCGGGCGCTGGTGTGCCAGGTaGCCGCCAGCCGGCCGGGGCGGGACGGAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: CFWASCGRWCAR*PPAGRGGTEGR
Trigger: GCGGCCCTCCGTCCCGCCCCGGCCGGCTGGCGGTCACCTGGCACACCAGCGCCCGCAGGATGCCCAGAAACA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453846.5
CDS CCA 72 bp CCAGGGAATGAGCAGGACTTAATTCTCATGCCGGCATaGGGCTGCCGGGCACCCAGCTCCTTTCCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: PGNEQDLILMPA*GCRAPSSFPVG
Trigger: ACCCACAGGAAAGGAGCTGGGTGCCCGGCAGCCCCATGCCGGCATGAGAATTAAGTCCTGCTCATTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 72 bp TCGAGGGTGGCTGAAGCCTATCCCCTCAGCTCAGGGTaGAAGGTGGGAACCAACCCTTGGACACGACGACAT +
Preference number: 6 (lower is better)
Translates to: SRVAEAYPLSSG*KVGTNPWTRRH
Trigger: ATGTCGTCGTGTCCAAGGGTTGGTTCCCACCTTGCACCCTGAGCTGAGGGGATAGGCTTCAGCCACCCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442541.1
CDS CCA 72 bp CAGACAAGGCCAATTCATCCAGCCTGCACTGAGATGTaGGAGGCAGTACCCTGGGGTACCTTTAGCACGGGA +
Preference number: 6 (lower is better)
Translates to: QTRPIHPACTEM*EAVPWGTFSTG
Trigger: TCCCGTGCTAAAGGTACCCCAGGGTACTGCCTCCCACATCTCAGTGCAGGCTGGATGAATTGGCCTTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442541.1
CDS GCA 72 bp AATGAGCAGGACTTAATTCTCATGCCGGCATGGGGCTaGCGGGCACCCAGCTCCTTTCCTGTGGGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: NEQDLILMPAWG*RAPSSFPVGRK
Trigger: TTTTCTACCCACAGGAAAGGAGCTGGGTGCCCGGCAGCCCCATGCCGGCATGAGAATTAAGTCCTGCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 72 bp AGACAGGAAACACAGACAAGGCCAATTCATCCAGCCTaGACTGAGATGTGGGAGGCAGTACCCTGGGGTACC +
Preference number: 6 (lower is better)
Translates to: RQETQTRPIHPA*TEMWEAVPWGT
Trigger: GGTACCCCAGGGTACTGCCTCCCACATCTCAGTGCAGGCTGGATGAATTGGCCTTGTCTGTGTTTCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442541.1
CDS TCA 72 bp CTCCTGGACTCTAGCGATCTTGCTTCCTCAGCCTTCTaGGTAGCTAGGACTACAGATGTGCCTCACCATGCC +
Preference number: 6 (lower is better)
Translates to: LLDSSDLASSAF*VARTTDVPHHA
Trigger: GGCATGGTGAGGCACATCTGTAGTCCTAGCTACTCAGAAGGCTGAGGAAGCAAGATCGCTAGAGTCCAGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS CCA 72 bp AAGCAGTACCTAATTATTCCAGTTCAGGGTCGAGGGTaGCTGAAGCCTATCCCCTCAGCTCAGGGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: KQYLIIPVQGRG*LKPIPSAQGAR
Trigger: CCTTGCACCCTGAGCTGAGGGGATAGGCTTCAGCCACCCTCGACCCTGAACTGGAATAATTAGGTACTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442541.1
ENST00000460539.5
CDS CAA 90 bp CGGGCACCCAGCTCCTTTCCTGTGGGTAGAAAACAAGTCCCCAAGTaGCTACTGAGCCAAACTGTAAAGGCCAGTCAGGAAATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RAPSSFPVGRKQVPK*LLSQTVKASQEMSS
Trigger: GCTGCTCATTTCCTGACTGGCCTTTACAGTTTGGCTCAGTAGCAACTTGGGGACTTGTTTTCTACCCACAGGAAAGGAGCTGGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 72 bp CTCTTTCAGGCAATTTTCAGTGCGAGTGCCAAATGCTaGTTAGGGGGATATGTCTCTGCTCACCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LFQAIFSASAKC*LGGYVSAHLRE
Trigger: CTCCCTCAGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 72 bp TCTATGAGGAAAACGTCAGCTTGCTTATCCAGGGAATaGGCAGGACTTAATTCTCATGCCGGCATGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SMRKTSACLSRE*AGLNSHAGMGL
Trigger: CAGCCCCATGCCGGCATGAGAATTAAGTCCTGCTCATTCCCTGGATAAGCAAGCTGACGTTTTCCTCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 72 bp GGTTTACAACACCTTGCATCCAACAGCTTTCCAATCTaGAGCAGCTCCCCTAGCCAAACTGTCATGCTTGGC +
Preference number: 6 (lower is better)
Translates to: GLQHLASNSFPI*SSSPSQTVMLG
Trigger: GCCAAGCATGACAGTTTGGCTAGGGGAGCTGCTTCAGATTGGAAAGCTGTTGGATGCAAGGTGTTGTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463392.5
CDS CCA 72 bp AACCTAGAAAGTGAGGTAACCCAAGCCAAATTCCTCTaGTGTCACAGTTCCTCCTATACCAGGCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: NLESEVTQAKFL*CHSSSYTRPGT
Trigger: AGTGCCTGGCCTGGTATAGGAGGAACTGTGACACCAGAGGAATTTGGCTTGGGTTACCTCACTTTCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 72 bp ATTCTCTTTCAGGCAATTTTCAGTGCGAGTGCCAAATaGTGCTTAGGGGGATATGTCTCTGCTCACCTGAGG +
Preference number: 6 (lower is better)
Translates to: ILFQAIFSASAK*CLGGYVSAHLR
Trigger: CCTCAGGTGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS CAA 72 bp AGCCCCACTAATGCAGTGGACTCAGCAGCGGGCTCATaGCTAATTTTAGGAAGTCACACAGGTTTAGTGCTT +
Preference number: 6 (lower is better)
Translates to: SPTNAVDSAAGS*LILGSHTGLVL
Trigger: AAGCACTAAACCTGTGTGACTTCCTAAAATTAGCAATGAGCCCGCTGCTGAGTCCACTGCATTAGTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS CAA 72 bp AGCTCCTTTCCTGTGGGTAGAAAACAAGTCCCCAAGTaGCTACTGAGCCAAACTGTAAAGGCCAGTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SSFPVGRKQVPK*LLSQTVKASQE
Trigger: TTCCTGACTGGCCTTTACAGTTTGGCTCAGTAGCAACTTGGGGACTTGTTTTCTACCCACAGGAAAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 72 bp GCTTCCTTAACTTGGGAATCTTGGGAACCTAGAAAGTaGGGTAACCCAAGCCAAATTCCTCTGGTGTCACAG +
Preference number: 6 (lower is better)
Translates to: ASLTWESWEPRK*GNPSQIPLVSQ
Trigger: CTGTGACACCAGAGGAATTTGGCTTGGGTTACCTCACTTTCTAGGTTCCCAAGATTCCCAAGTTAAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS GCA 72 bp TTCAGCCATTCTCTTTCAGGCAATTTTCAGTGCGAGTaGCAAATGCTGCTTAGGGGGATATGTCTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: FSHSLSGNFQCE*QMLLRGICLCS
Trigger: TGAGCAGAGACATATCCCCCTAAGCAGCATTTGGCACTCGCACTGAAAATTGCCTGAAAGAGAATGGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 72 bp TGCACTATTTGGCAAGAGAAAGAAGCACCTGGAGAGTaGGTTAGGGAGAGAAAGCATGGAAGAAATGTGAGT +
Preference number: 6 (lower is better)
Translates to: CTIWQEKEAPGE*VRERKHGRNVS
Trigger: ACTCACATTTCTTCCATGCTTTCTCTCCCTAACTCACTCTCCAGGTGCTTCTTTCTCTTGCCAAATAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS TCA 72 bp GGTAATTCTTTATTCTCGAGAGCTTCCTCGTGCACATaGTCAGCTTTTGCACATGCTTGGAGGAAAAACAAC +
Preference number: 6 (lower is better)
Translates to: GNSLFSRASSCT*SAFAHAWRKNN
Trigger: GTTGTTTTTCCTCCAAGCATGTGCAAAAGCTGATCATGTGCACGAGGAAGCTCTCGAGAATAAAGAATTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS CAA 72 bp TATTCTCGAGAGCTTCCTCGTGCACATGATCAGCTTTaGCACATGCTTGGAGGAAAAACAACACTATTAAAA +
Preference number: 6 (lower is better)
Translates to: YSRELPRAHDQL*HMLGGKTTLLK
Trigger: TTTTAATAGTGTTGTTTTTCCTCCAAGCATGTGCAAAAGCTGATCATGTGCACGAGGAAGCTCTCGAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375258.9
ENST00000612742.5
CDS CAA 72 bp CTGTGTATGCTGGTATCAAATAATCCTTGCATCATGTaGCTTAGTACCATGTCTGAACTACAGAAAGAGGTC +
Preference number: 6 (lower is better)
Translates to: LCMLVSNNPCIM*LSTMSELQKEV
Trigger: GACCTCTTTCTGTAGTTCAGACATGGTACTAAGCAACATGATGCAAGGATTATTTGATACCAGCATACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS TCA 72 bp ATTCTTGAGAAACGATTTGTAGCACTAGTTTTTACATaGTCCCATGATGATTCTCTCGCCTTCTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: ILEKRFVALVFT*SHDDSLAFSSG
Trigger: ACCTGAAGAGAAGGCGAGAGAATCATCATGGGATCATGTAAAAACTAGTGCTACAAATCGTTTCTCAAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000375258.9
ENST00000392599.6
ENST00000392604.6
ENST00000442778.5
ENST00000447486.5
ENST00000460539.5
ENST00000462821.1
ENST00000612742.5
CDS GCA 72 bp TGTGTATGCTGGTATCAAATAATCCTTGCATCATGTTaGTTAGTACCATGTCTGAACTACAGAAAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: CVCWYQIILASC*LVPCLNYRKRS
Trigger: TGACCTCTTTCTGTAGTTCAGACATGGTACTAAGCAACATGATGCAAGGATTATTTGATACCAGCATACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS CAA 90 bp TTGATTATACTGTGTATGCTGGTATCAAATAATCCTTGCATCATGTaGCTTAGTACCATGTCTGAACTACAGAAAGAGGTCAGCATGTCA +
Preference number: 6 (lower is better)
Translates to: LIILCMLVSNNPCIM*LSTMSELQKEVSMS
Trigger: TGACATGCTGACCTCTTTCTGTAGTTCAGACATGGTACTAAGCAACATGATGCAAGGATTATTTGATACCAGCATACACAGTATAATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS CAA 90 bp CTTAAGGCAGCCATATACTCTGAAATTTGTAGACTAATACTCCTCTaGATTATACTGTGTATGCTGGTATCAAATAATCCTTGCATCATG +
Preference number: 6 (lower is better)
Translates to: LKAAIYSEICRLILL*IILCMLVSNNPCIM
Trigger: CATGATGCAAGGATTATTTGATACCAGCATACACAGTATAATCAAGAGGAGTATTAGTCTACAAATTTCAGAGTATATGGCTGCCTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5
CDS GCA 72 bp TTGATTATACTGTGTATGCTGGTATCAAATAATCCTTaGATCATGTTGCTTAGTACCATGTCTGAACTACAG +
Preference number: 6 (lower is better)
Translates to: LIILCMLVSNNP*IMLLSTMSELQ
Trigger: CTGTAGTTCAGACATGGTACTAAGCAACATGATGCAAGGATTATTTGATACCAGCATACACAGTATAATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483284.5