RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL7B (Homo sapiens)

Ensembl gene IDs: ENSG00000170439

Ensembl transcript IDs: ENST00000394252.4, ENST00000614691.1

Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATaGGAACGAAGGAAAGGGACAACATTGGGAGGCAAACGTTGGGAG +
Preference number: 1 (lower is better)
Translates to: THGCSLRRKARGALP*ERRKGTTLGGKRWE
Trigger: CTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR TCA 90 bp ACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTaGGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCGTA +
Preference number: 1 (lower is better)
Translates to: TLGGKRWETSPETCS*GYNRVLVFPPWVSV
Trigger: TACGCTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR CCA 90 bp TTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTAGGTaGTACATGAATGTCTTCTCTCATTCTGCTAGGTCCCTCTCAGTG +
Preference number: 1 (lower is better)
Translates to: LEIALAEVGERGTSR*YMNVFSHSARSLSV
Trigger: CACTGAGAGGGACCTAGCAGAATGAGAGAAGACATTCATGTACCACCTACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
3UTR CCA 90 bp AAGCGAGAGGAGCTTTACCATGGGAACGAAGGAAAGGGACAACATTaGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAG +
Preference number: 1 (lower is better)
Translates to: KREELYHGNEGKGQH*EANVGRLVQKLAVE
Trigger: CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CCA 90 bp CTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAGGAGCTTTACCATaGGAACGAAGGAAAGGGACA +
Preference number: 2 (lower is better)
Translates to: LALASPASLILPGAPSSGRGALP*ERRKGT
Trigger: TGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCT...TCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR CAA 90 bp CTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACT +
Preference number: 2 (lower is better)
Translates to: LGQRRSRAFSLSKAG*KLEIALAEVGERGT
Trigger: AGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CCA 90 bp GCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTCTAGGTCCCTCTCAGTaGAAGATAGATAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: AGLKLEIALAEVGERGTSLGPSQ*KIDRLV
Trigger: CACCAGCCTATCTATCTTCCACTGAGAGGGACCTAG...ACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
3UTR-3UTR CCA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAAGAGGGACTAGTAGGTaGTACATGAATGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: ALASPASLILPGAPSSGRRGTSR*YMNVFS
Trigger: AGAGAAGACATTCATGTACCACCTACTAGTCCCTCT...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CCA 90 bp ACCTCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGTGGCTTGTTCTAATTaGAGGCTGGGGAAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: TSASLSLALASPASLILPVACSN*RLGKEQ
Trigger: TTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCAC...AGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394252.4
3UTR-3UTR CCA 90 bp CACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGCTAGTGTTTCCTCCCTaGGTCAGCGTAGAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: HHDFCDQFLETHGCSLRRLVFPP*VSVEVE
Trigger: CTCTACTTCTACGCTGACCCAGGGAGGAAACACTAG...CCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR GCA 90 bp GGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCATTGAAGTTAGAGATTaGCCTGGCAGAGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GCRHHDFCDQFLETHGCSIEVRD*PGRGWG
Trigger: TCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAAT...GCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR TCA 90 bp GAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATGGGAACTAGTAGGTGGTACATaGATGTCTTCTCTCATTCTG +
Preference number: 2 (lower is better)
Translates to: ETHGCSLRRKARGALPWELVGGT*MSSLIL
Trigger: CAGAATGAGAGAAGACATTCATGTACCACCTACTAG...TTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CCA 90 bp CATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAATTGGGAGGCAAACGTTaGGAGACTAGTCCAGAAACT +
Preference number: 2 (lower is better)
Translates to: HDFCDQFLETHGCSLRRKLGGKR*ETSPET
Trigger: AGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAA...TTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CCA 90 bp GGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGAGAGGGACTAGTAGGTaGTACATGAATGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GQRRSRAFSLSKAGLKLERGTSR*YMNVFS
Trigger: AGAGAAGACATTCATGTACCACCTACTAGTCCCTCT...CTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACGCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CAA 90 bp GCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAAGGTGGAGGAAAGGGACAACATaGGGAGGCAAACGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: ASPASLILPGAPSSGRRWRKGTT*GGKRWE
Trigger: CTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCT...CCACCTTCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CAA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGATCCAGAAACTTGCAGTaGAGGATACAACAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: ALASPASLILPGAPSSGRSRNLQ*RIQQGP
Trigger: AGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGGA...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CAA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGACTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTG +
Preference number: 3 (lower is better)
Translates to: CDQFLETHGCSLRRKARGLSKAG*KLEIAL
Trigger: CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAG...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR-3UTR CAA 90 bp ATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATGGGAACGAAGGACTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTG +
Preference number: 3 (lower is better)
Translates to: MGVASGGKREELYHGNEGLSKAG*KLEIAL
Trigger: CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAG...TCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR TCA 72 bp GGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTaGGGATACAACAGGGTCCTAGTGTTTCCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GKRWETSPETCS*GYNRVLVFPPW
Trigger: CCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR CCA 72 bp TGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATaGGAACGAAGGAAAGGGACAACATTGGGAGGCAAA +
Preference number: 3 (lower is better)
Translates to: CSLRRKARGALP*ERRKGTTLGGK
Trigger: TTTGCCTCCCAATGTTGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR CCA 72 bp GAGCTTTACCATGGGAACGAAGGAAAGGGACAACATTaGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTT +
Preference number: 3 (lower is better)
Translates to: ELYHGNEGKGQH*EANVGRLVQKL
Trigger: AAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCTTCGTTCCCATGGTAAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAATGGCAGACCAGCTCTaGGCTGTGCTTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALASPASLILPGAPSSGRMADQL*AVLPLG
Trigger: CCCCAGCGGAAGCACAGCTCAGAGCTGGTCTGCCAT...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614691.1
CDS-3UTR TCA 90 bp TCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGTTGGGTCTAGGCAGGTaGCCCTGCAGCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLSKAGLKLEIALAEVGELGLGR*PCSPVG
Trigger: ACCCACCGGGCTGCAGGGTCACCTGCCTAGACCCAA...CTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGACTTTTGCACAGGGGCTaGCAGCAGCCCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CDQFLETHGCSLRRKARGLLHRG*QQPSRA
Trigger: GGCTCTGCTGGGCTGCTGGCAGCCCCTGTGCAAAAG...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGACCAGCTCTGAGCTGTaGTTCCGCTGGGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RHHDFCDQFLETHGCSLRTSSEL*FRWGTG
Trigger: GCCAGTGCCCCAGCGGAAGCACAGCTCAGAGCTGGT...CCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614691.1
CDS-3UTR TCA 90 bp GCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTTTGGGTCTAGGCAGGTaGCCCTGCAGCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AFSLSKAGLKLEIALAEVLGLGR*PCSPVG
Trigger: ACCCACCGGGCTGCAGGGTCACCTGCCTAGACCCAA...AACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAAGCAGAGCCATGAGGTaGAGGGGCAGGGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CDQFLETHGCSLRRKARGSRAMR*RGRVRS
Trigger: GCTTCTTACCCTGCCCCTGCACCTCATGGCTCTGCT...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp TTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGGTGGGCTCGAAAACTTaGTGCCACATGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FESCSGIPSISDSPWCPQVGSKT*CHMKAQ
Trigger: CTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCAC...CTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGGGCTTGGCAGGGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGGGTAGAACTGAAAGTTaGCTCCGGTTCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GAWQGCRHHDFCDQFLETGRTES*LRFRSP
Trigger: TGGGCTGCGGAACCGGAGCCAACTTTCAGTTCTACC...CGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCCCTGCCAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGACAATGTGTTTCCAGGTaGGCTCGAAAACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALASPASLILPGAPSSGRQCVSR*ARKLAA
Trigger: GGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTG...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGACTAGGTCCCTCTCAGTaGAAGATAGATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALASPASLILPGAPSSGRLGPSQ*KIDRLV
Trigger: CACCAGCCTATCTATCTTCCACTGAGAGGGACCTAG...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGCAGAGCCATGAGGTaGAGGGGCAGGGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RHHDFCDQFLETHGCSLRSRAMR*RGRVRS
Trigger: GCTTCTTACCCTGCCCCTGCACCTCATGGCTCTGCT...CCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTCTTTTGCACAGGGGCTaGCAGCAGCCCAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SFFTVEGGIEVRDCPGRGLLHRG*QQPSRA
Trigger: GGCTCTGCTGGGCTGCTGGCAGCCCCTGTGCAAAAG...ACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCGGCTCGAAAACTTGCTaGCACATGAAGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ASLSLALASPASLILPGAGSKTC*HMKAQL
Trigger: AAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCC...GGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTGTGGGCTCGAAAACTTaGTGCCACATGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGLKLEIALAEVGERGTSVGSKT*CHMKAQ
Trigger: CTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCAC...ACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGTCTTGCGGTTGCTCTTaGGAGTCAGCACGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SLSKAGLKLEIALAEVGESCGCS*ESARPS
Trigger: TGATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGA...CTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGGTAGAACTGAAAGTTaGCTCCGGTTCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CDQFLETHGCSLRRKARGGRTES*LRFRSP
Trigger: TGGGCTGCGGAACCGGAGCCAACTTTCAGTTCTACC...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTCTGCAGGACCTTCCTTaGGCTCTGCACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SASLSLALASPASLILPGLQDLP*ALHRAQ
Trigger: CTGTGCTCTGTGCAGAGCCCAAGGAAGGTCCTGCAG...ACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCTTTCCCATGATGTaGGGCCCAACAGGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SASLSLALASPASLILPGAFPMM*GPTGSH
Trigger: GTGGCTACCTGTTGGGCCCCACATCATGGGAAAGGC...ACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp GGGGCTTGGCAGGGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGAAACTTGCTGCCACATaGAGGCCCAGCTTCCATATG +
Preference number: 4 (lower is better)
Translates to: GAWQGCRHHDFCDQFLETKLAAT*RPSFHM
Trigger: CATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTT...CGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCCCTGCCAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp AGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTCCAGGTCTCTCTGGTaGGGCAGCAGCCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: SFFTVEGGIEVRDCPGRGSRSLW*GSSHPQ
Trigger: TTGGGGATGGCTGCTGCCTCACCAGAGAGACCTGGA...ACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp TCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAAGCCAGAAACTTGCAGTTaGGGATACAACAGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: SGIPSISDSPWCPQLRKKPETCS*GYNRVL
Trigger: TAGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGG...CTTCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp AGAAACTTGCAGTTGAGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCATCCCCAGCATCTCTaGTTCTCCCTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RNLQLRIQQGPSVSSLGQHPQHL*FSLVPP
Trigger: TGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATG...CTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp GTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGACATCCCCAGCATCTCTaGTTCTCCCTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VLVFPPWVSVEVELFHCRHPQHL*FSLVPP
Trigger: TGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATG...TCGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp GCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTAAACCTCTGCCTCTTTaGGTCTTGCTCTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: AGLKLEIALAEVGERGTSKPLPL*VLLWHP
Trigger: GGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGTTT...ACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAGCTTCCATATGGTTCTaGCACATGCTCCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ALASPASLILPGAPSSGRASIWF*HMLPEK
Trigger: TTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGC...TCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAACAGCAGCTGCAGGAGTaGGACCAGGATGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: HDFCDQFLETHGCSLRRKQQLQE*DQDVHG
Trigger: GCCATGGACATCCTGGTCCCACTCCTGCAGCTGCTG...TTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CAGTTGAGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTCTGCAGGACCTTCCTTaGGCTCTGCACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: QLRIQQGPSVSSLGQRRSLQDLP*ALHRAQ
Trigger: CTGTGCTCTGTGCAGAGCCCAAGGAAGGTCCTGCAG...ACTTCTACGCTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp ATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATGGGAACGAAGGAGGCCCAGCTTCCATATaGTTCTGCCACATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: MGVASGGKREELYHGNEGGPASI*FCHMLP
Trigger: TGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCC...TCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGCTCAGGAAGAAGTGGATTTCGGAGAACTaGGCGTTCTCAAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: SGIPSISDSPWCPQLRKKWISEN*AFSRSF
Trigger: GAAGGATCTTGAGAACGCCCAGTTCTCCGAAATCCA...CTTCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACGTGGCTTGTTCTAATTaGAGGCTGGGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGGIEVRDCPGRGWGERDVACSN*RLGKEQ
Trigger: TTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCAC...GTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACGGAAAGGGACAACATTaGGAGGCAAACGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EGGIEVRDCPGRGWGERDGKGQH*EANVGR
Trigger: TCTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCC...GTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCATTGAAGTTAGAGATTaGCCTGGCAGAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASLSLALASPASLILPGAIEVRD*PGRGWG
Trigger: TCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAAT...GGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp CAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCTGATTCTCCCTGGTaGCCCCAGCTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QGPSVSSLGQRRSRAFSLSDSPW*PQLRKK
Trigger: CTTCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGA...CAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTGTAAGCCCCTTTATCTaGCTGAAGAGCTCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: KAGLKLEIALAEVGERGTVSPFI*LKSSRF
Trigger: GAAACGGGAGCTCTTCAGCCAGATAAAGGGGCTTAC...AGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGGGCCCAGCTTCCATATaGTTCTGCCACATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPSVSSLGQRRSRAFSLSGPASI*FCHMLP
Trigger: TGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCC...CGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTCTAGTGTTTCCTCCCTaGGTCAGCGTAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: AGLKLEIALAEVGERGTSLVFPP*VSVEVE
Trigger: CTCTACTTCTACGCTGACCCAGGGAGGAAACACTAG...ACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGGAAAGGGACAACATTaGGAGGCAAACGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: CDQFLETHGCSLRRKARGGKGQH*EANVGR
Trigger: TCTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCC...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGAAACTTGCAGTTGAGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGTCTGATTCTCCCTGGTaGCCCCAGCTCAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RNLQLRIQQGPSVSSLGQSDSPW*PQLRKK
Trigger: CTTCTTCCTGAGCTGGGGGCACCAGGGAGAATCAGA...CTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGTGCCTCTTTGAGTCTTaGTCTGGCATCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: GPSVSSLGQRRSRAFSLSCLFES*SGIPSI
Trigger: GATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCA...CGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCAGCAGCTGCAGGAGTaGGACCAGGATGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: RRSRAFSLSKAGLKLEIAQQLQE*DQDVHG
Trigger: GCCATGGACATCCTGGTCCCACTCCTGCAGCTGCTG...GGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGGATGACCCTGCAGCCCGGTaGGTAGAACTGAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QHWEANVGRLVQKLAVEDDPAAR*VELKVG
Trigger: GCCAACTTTCAGTTCTACCCACCGGGCTGCAGGGTC...ATCCTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGGAACTTCTCAAAGTaGGGATTTGGGTCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KAGLKLEIALAEVGERGTRNFSK*GFGSRQ
Trigger: CTGCCTAGACCCAAATCCCCACTTTGAGAAGTTCCT...AGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGACAAACCGCTCATATTaGAGGTGCCTGTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HHDFCDQFLETHGCSLRRTNRSY*RCLFSA
Trigger: GGCTGAGAACAGGCACCTCCAATATGAGCGGTTTGT...CCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp ACCTCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTACAAACCGCTCATATTaGAGGTGCCTGTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TSASLSLALASPASLILPTNRSY*RCLFSA
Trigger: GGCTGAGAACAGGCACCTCCAATATGAGCGGTTTGT...AGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GAGAGAGGGACTAGTAGGTGGTACATGAATGTCTTCTCTCATTCTGCTAGGTCCGCCTTTCCCATGATGTaGGGCCCAACAGGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ERGTSRWYMNVFSHSARSAFPMM*GPTGSH
Trigger: GTGGCTACCTGTTGGGCCCCACATCATGGGAAAGGC...GGACCTAGCAGAATGAGAGAAGACATTCATGTACCACCTACTAGTCCCTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS-3UTR CCA 90 bp GGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTAGGTCCCTCTCAGTaGAAGATAGATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GCRHHDFCDQFLETHGCSLGPSQ*KIDRLV
Trigger: CACCAGCCTATCTATCTTCCACTGAGAGGGACCTAG...GCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp CATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAAAACCTCTGCCTCTTTaGGTCTTGCTCTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HDFCDQFLETHGCSLRRKKPLPL*VLLWHP
Trigger: GGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGTTT...TTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGAGAGCTCCCGTTTCTTaGTCTCCATCTTGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: RAFSLSKAGLKLEIALAERAPVS*SPSCGC
Trigger: GCAACCGCAAGATGGAGAGCAAGAAACGGGAGCTCT...CTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCGCCTGTTCTCAGCCATaGTCTTTGTCAGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: GCRHHDFCDQFLETHGCSACSQP*SLSGTS
Trigger: AGAAGTTCCTGACAAAGAGCATGGCTGAGAACAGGC...GCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp AGAAACTTGCAGTTGAGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGGGCTCGAAAACTTGCTaGCACATGAAGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RNLQLRIQQGPSVSSLGQGSKTC*HMKAQL
Trigger: AAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCC...CTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp CATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAATGCCTCTTTGAGTCTTaGTCTGGCATCCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HDFCDQFLETHGCSLRRKCLFES*SGIPSI
Trigger: GATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCA...TTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGTCTTGCGGTTGCTCTTaGGAGTCAGCACGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GQRRSRAFSLSKAGLKLESCGCS*ESARPS
Trigger: TGATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGA...CTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACGCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGACCCTGCAGCCCGGTaGGTAGAACTGAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSRAFSLSKAGLKLEIALDPAAR*VELKVG
Trigger: GCCAACTTTCAGTTCTACCCACCGGGCTGCAGGGTC...CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGACAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGGGCTGTCGTTCCATTTaGATTTCGGAGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: GQHWEANVGRLVQKLAVEGCRSI*ISENWA
Trigger: CGCCCAGTTCTCCGAAATCCAAATGGAACGACAGCC...CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGGCTGTCGTTCCATTTaGATTTCGGAGAACTGGGCG +
Preference number: 4 (lower is better)
Translates to: RAFSLSKAGLKLEIALAEGCRSI*ISENWA
Trigger: CGCCCAGTTCTCCGAAATCCAAATGGAACGACAGCC...CTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
3UTR CAA 72 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRSRAFSLSKAG*KLEIALAEVGE
Trigger: CTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp AGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTAAACTTGCTGCCACATaGAGGCCCAGCTTCCATATG +
Preference number: 4 (lower is better)
Translates to: SFFTVEGGIEVRDCPGRGKLAAT*RPSFHM
Trigger: CATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTT...ACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp AAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTCTAGTAGGTGGTACATaGATGTCTTCTCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KAGLKLEIALAEVGERGTLVGGT*MSSLIL
Trigger: CAGAATGAGAGAAGACATTCATGTACCACCTACTAG...AGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp ATAGGCTGGTGGGTGGCTTGTTCTAATTGGAGGCTGGGGAAGGAGCAAATGAGTGCCTGTTCTCAGCCATaGTCTTTGTCAGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: IGWWVACSNWRLGKEQMSACSQP*SLSGTS
Trigger: AGAAGTTCCTGACAAAGAGCATGGCTGAGAACAGGC...ACTCATTTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCACCCACCAGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS-3UTR GCA 90 bp ATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATGGGAACGAAGGATATGGTTCTGCCACATaGTCCCAGAAAAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: MGVASGGKREELYHGNEGYGSAT*SQKKST
Trigger: TGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATA...TCCTTCGTTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp CACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGTATGGTTCTGCCACATaGTCCCAGAAAAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: HHDFCDQFLETHGCSLRRYGSAT*SQKKST
Trigger: TGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATA...CCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGACAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGGTGGCTTGTTCTAATTaGAGGCTGGGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GQHWEANVGRLVQKLAVEVACSN*RLGKEQ
Trigger: TTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCAC...CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGCTAGTGTTTCCTCCCTaGGTCAGCGTAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RAFSLSKAGLKLEIALAELVFPP*VSVEVE
Trigger: CTCTACTTCTACGCTGACCCAGGGAGGAAACACTAG...CTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp ATAGGCTGGTGGGTGGCTTGTTCTAATTGGAGGCTGGGGAAGGAGCAAATGAGTAGAGGAGCTTTACCATaGGAACGAAGGAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: IGWWVACSNWRLGKEQMSRGALP*ERRKGT
Trigger: TGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCT...ACTCATTTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCACCCACCAGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
3UTR CAA 72 bp GGAGCTTTACCATGGGAACGAAGGAAAGGGACAACATaGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: GALPWERRKGTT*GGKRWETSPET
Trigger: AGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp GGACAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGAGGAACTTCTCAAAGTaGGGATTTGGGTCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQHWEANVGRLVQKLAVERNFSK*GFGSRQ
Trigger: CTGCCTAGACCCAAATCCCCACTTTGAGAAGTTCCT...CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp ACCTCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTAGAGGGACTAGTAGGTaGTACATGAATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TSASLSLALASPASLILPRGTSR*YMNVFS
Trigger: AGAGAAGACATTCATGTACCACCTACTAGTCCCTCT...AGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAGCTTCCATATGGTTCTaGCACATGCTCCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLVFPPWVSVEVELFHCRASIWF*HMLPEK
Trigger: TTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGC...TCGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR GCA 90 bp GGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGAAGTTAGAGATTaGCCTGGCAGAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GQRRSRAFSLSKAGLKLEIEVRD*PGRGWG
Trigger: TCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAAT...CTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACGCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGCAATGTGTTTCCAGGTaGGCTCGAAAACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRAFSLSKAGLKLEIALQCVSR*ARKLAA
Trigger: GGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTG...CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCCAGAAACTTGCAGTTaGGGATACAACAGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: RRSRAFSLSKAGLKLEIAPETCS*GYNRVL
Trigger: TAGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGG...GGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCTGGATTTCGGAGAACTaGGCGTTCTCAAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: RRSRAFSLSKAGLKLEIAWISEN*AFSRSF
Trigger: GAAGGATCTTGAGAACGCCCAGTTCTCCGAAATCCA...GGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGAGAGGGACTAGTAGGTaGTACATGAATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RAFSLSKAGLKLEIALAERGTSR*YMNVFS
Trigger: AGAGAAGACATTCATGTACCACCTACTAGTCCCTCT...CTCTGCCAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCTTGGGAGGCAAACGTTaGGAGACTAGTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RRSRAFSLSKAGLKLEIALGGKR*ETSPET
Trigger: AGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAA...GGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CCA 90 bp AGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGAGAGGAGCTTTACCATaGGAACGAAGGAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: RSRAFSLSKAGLKLEIALRGALP*ERRKGT
Trigger: TGTCCCTTTCCTTCGTTCCCATGGTAAAGCTCCTCT...CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR TCA 90 bp AGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGCTAGTAGGTGGTACATaGATGTCTTCTCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: RSRAFSLSKAGLKLEIALLVGGT*MSSLIL
Trigger: CAGAATGAGAGAAGACATTCATGTACCACCTACTAG...CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GGGGCTTGGCAGGGATGCAGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGGGGCTGTCGTTCCATTaGGATTTCGGAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: GAWQGCRHHDFCDQFLETGLSFH*DFGELG
Trigger: GCCCAGTTCTCCGAAATCCAAATGGAACGACAGCCC...CGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCTGCATCCCTGCCAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS GCA 90 bp ACTTGCTGCCACATGAAGGCCCAGCTTCCATATGGTTCTGCCACATaGTCCCAGAAAAAGAGCACACCTCCCGGTCTCAGTACTCTCCGG +
Preference number: 5 (lower is better)
Translates to: TCCHMKAQLPYGSAT*SQKKSTPPGLSTLR
Trigger: CCGGAGAGTACTGAGACCGGGAGGTGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS GCA 90 bp CAGCAGCCATCCCCAATGTGTTTCCAGGTGGGCTCGAAAACTTGCTaGCACATGAAGGCCCAGCTTCCATATGGTTCTGCCACATGCTCC +
Preference number: 5 (lower is better)
Translates to: QQPSPMCFQVGSKTC*HMKAQLPYGSATCS
Trigger: GGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTGGGGATGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS GCA 90 bp AGGCAGCAGCCATCCCCAATGTGTTTCCAGGTGGGCTCGAAAACTTaGTGCCACATGAAGGCCCAGCTTCCATATGGTTCTGCCACATGC +
Preference number: 5 (lower is better)
Translates to: RQQPSPMCFQVGSKT*CHMKAQLPYGSATC
Trigger: GCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTGGGGATGGCTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 90 bp GGTGGGCTCGAAAACTTGCTGCCACATGAAGGCCCAGCTTCCATATaGTTCTGCCACATGCTCCCAGAAAAAGAGCACACCTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GGLENLLPHEGPASI*FCHMLPEKEHTSRS
Trigger: AGACCGGGAGGTGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 90 bp CACTTCAAGGGAGGGGGCTGTCGTTCCATTTGGATTTCGGAGAACTaGGCGTTCTCAAGATCCTTCCAGGTCTCTCTGGTGAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HFKGGGCRSIWISEN*AFSRSFQVSLVRQQ
Trigger: CTGCTGCCTCACCAGAGAGACCTGGAAGGATCTTGAGAACGCCCAGTTCTCCGAAATCCAAATGGAACGACAGCCCCCTCCCTTGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 90 bp GCCTTGGAGCTTGGGAAAGATTATTTGACAGCCTTTCCCATGATGTaGGGCCCAACAGGTAGCCACTTCAAGGGAGGGGGCTGTCGTTCC +
Preference number: 5 (lower is better)
Translates to: ALELGKDYLTAFPMM*GPTGSHFKGGGCRS
Trigger: GGAACGACAGCCCCCTCCCTTGAAGTGGCTACCTGTTGGGCCCCACATCATGGGAAAGGCTGTCAAATAATCTTTCCCAAGCTCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS-3UTR CAA 90 bp AGGCACCATGACTTTTGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGATCTTGCGGTTGCTCTaGGGAGTCAGCACGGCCATC +
Preference number: 5 (lower is better)
Translates to: RHHDFCDQFLETHGCSLRILRLL*GVSTAI
Trigger: GATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGAT...CCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACAAAAGTCATGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp TGTGACCAGTTCCTAGAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGGGCTGTCGTTCCATTaGGATTTCGGAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: CDQFLETHGCSLRRKARGGLSFH*DFGELG
Trigger: GCCCAGTTCTCCGAAATCCAAATGGAACGACAGCCC...TCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTCTAGGAACTGGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS TCA 90 bp TTTCGGAGAACTGGGCGTTCTCAAGATCCTTCCAGGTCTCTCTGGTaGGGCAGCAGCCATCCCCAATGTGTTTCCAGGTGGGCTCGAAAA +
Preference number: 5 (lower is better)
Translates to: FRRTGRSQDPSRSLW*GSSHPQCVSRWARK
Trigger: TTTTCGAGCCCACCTGGAAACACATTGGGGATGGCTGCTGCCTCACCAGAGAGACCTGGAAGGATCTTGAGAACGCCCAGTTCTCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GCGGGATTGAAGTTAGAGATTGCCCTGGCAGAGGTTGGGGAGAGAGGGACTAGTCACAAACCGCTCATATaGGAGGTGCCTGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: AGLKLEIALAEVGERGTSHKPLI*EVPVLS
Trigger: GCTGAGAACAGGCACCTCCAATATGAGCGGTTTGTG...ACTAGTCCCTCTCTCCCCAACCTCTGCCAGGGCAATCTCTAACTTCAATCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS GCA 90 bp CTCGAAAACTTGCTGCCACATGAAGGCCCAGCTTCCATATGGTTCTaGCACATGCTCCCAGAAAAAGAGCACACCTCCCGGTCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LENLLPHEGPASIWF*HMLPEKEHTSRSQY
Trigger: GTACTGAGACCGGGAGGTGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAGGTGGGCTCGAAAACTaGCTGCCACATGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: VLVFPPWVSVEVELFHCRGGLEN*LPHEGP
Trigger: TGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACC...TCGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCTCCAGAAACTTGCAGTaGAGGATACAACAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ASLSLALASPASLILPGASRNLQ*RIQQGP
Trigger: AGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGGA...GGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS TCA 90 bp CATCCCCAATGTGTTTCCAGGTGGGCTCGAAAACTTGCTGCCACATaGAGGCCCAGCTTCCATATGGTTCTGCCACATGCTCCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: HPQCVSRWARKLAAT*RPSFHMVLPHAPRK
Trigger: TTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 90 bp AGCTGTCTCATGTCCTCTCCAGGAGCCACCACAAACCGCTCATATTaGAGGTGCCTGTTCTCAGCCATGCTCTTTGTCAGGAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: SCLMSSPGATTNRSY*RCLFSAMLFVRNFS
Trigger: TGAGAAGTTCCTGACAAAGAGCATGGCTGAGAACAGGCACCTCCAATATGAGCGGTTTGTGGTGGCTCCTGGAGAGGACATGAGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GAGAGAGGGACTAGTAGGTGGTACATGAATGTCTTCTCTCATTCTGCTAGGTCCATCTTGCGGTTGCTCTaGGGAGTCAGCACGGCCATC +
Preference number: 5 (lower is better)
Translates to: ERGTSRWYMNVFSHSARSILRLL*GVSTAI
Trigger: GATGGCCGTGCTGACTCCCAAGAGCAACCGCAAGAT...GGACCTAGCAGAATGAGAGAAGACATTCATGTACCACCTACTAGTCCCTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS-3UTR CAA 90 bp CAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGCACAAACCGCTCATATaGGAGGTGCCTGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: QGPSVSSLGQRRSRAFSLHKPLI*EVPVLS
Trigger: GCTGAGAACAGGCACCTCCAATATGAGCGGTTTGTG...CAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp TTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTGGTGCCCCCAGGAGCAAATGAGTGCCTaGGAGCTTGGGAAAGATTAT +
Preference number: 5 (lower is better)
Translates to: FESCSGIPSISDSPWCPQEQMSA*ELGKDY
Trigger: ATAATCTTTCCCAAGCTCCAAGGCACTCATTTGCTC...CTGGGGGCACCAGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS-3UTR CAA 90 bp GAGACGCATGGGTGTAGCCTCAGGAGGAAAGCGAGAGGAGCTTTACCATGGGAATCCAGAAACTTGCAGTaGAGGATACAACAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ETHGCSLRRKARGALPWESRNLQ*RIQQGP
Trigger: AGGACCCTGTTGTATCCTCAACTGCAAGTTTCTGGA...TTCCCATGGTAAAGCTCCTCTCGCTTTCCTCCTGAGGCTACACCCATGCGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GGACAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGTTCTTGCTCTCCATCTaGCGGTTGCTCTTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: GQHWEANVGRLVQKLAVEFLLSI*RLLLGV
Trigger: GACTCCCAAGAGCAACCGCAAGATGGAGAGCAAGAA...CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp AGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCCTGGGTGGGCTCGAAAACTaGCTGCCACATGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RSRAFSLSKAGLKLEIALGGLEN*LPHEGP
Trigger: TGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACC...CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp AGAAACTTGCAGTTGAGGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RNLQLRIQQGPSVSSLGQLSKAG*KLEIAL
Trigger: CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAG...CTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCCTCAACTGCAAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GGACAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGAGGAAAGGGACAACATaGGGAGGCAAACGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: GQHWEANVGRLVQKLAVERKGTT*GGKRWE
Trigger: CTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCT...CTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTTTTCACTGTCGAAGGAAAGGGACAACATaGGGAGGCAAACGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: VLVFPPWVSVEVELFHCRRKGTT*GGKRWE
Trigger: CTCCCAACGTTTGCCTCCCAATGTTGTCCCTTTCCT...TCGACAGTGAAAAAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp CAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGGATTTCTTGCTCTCCATCTaGCGGTTGCTCTTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: QHWEANVGRLVQKLAVEDFLLSI*RLLLGV
Trigger: GACTCCCAAGAGCAACCGCAAGATGGAGAGCAAGAA...ATCCTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp CAACATTGGGAGGCAAACGTTGGGAGACTAGTCCAGAAACTTGCAGTTGAGGATCTGTCGAAGGCGGGATaGAAGTTAGAGATTGCCCTG +
Preference number: 5 (lower is better)
Translates to: QHWEANVGRLVQKLAVEDLSKAG*KLEIAL
Trigger: CAGGGCAATCTCTAACTTCAATCCCGCCTTCGACAG...ATCCTCAACTGCAAGTTTCTGGACTAGTCTCCCAACGTTTGCCTCCCAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp GGATACAACAGGGTCCTAGTGTTTCCTCCCTGGGTCAGCGTAGAAGTAGAGCTTGAGCAAATGAGTGCCTaGGAGCTTGGGAAAGATTTG +
Preference number: 5 (lower is better)
Translates to: GYNRVLVFPPWVSVEVELEQMSA*ELGKDL
Trigger: CAAATCTTTCCCAAGCTCCAAGGCACTCATTTGCTC...AAGCTCTACTTCTACGCTGACCCAGGGAGGAAACACTAGGACCCTGTTGTATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614691.1
CDS-3UTR CAA 90 bp CGTAGAAGTAGAGCTTTTTCACTGTCGAAGGCGGGATTGAAGTTAGAGATTGCCAAGAGCTCCCGTTTCTaGCTCTCCATCTTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: RRSRAFSLSKAGLKLEIAKSSRF*LSILRL
Trigger: CAACCGCAAGATGGAGAGCAAGAAACGGGAGCTCTT...GGCAATCTCTAACTTCAATCCCGCCTTCGACAGTGAAAAAGCTCTACTTCTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS-3UTR CAA 90 bp ACCTCTGCCTCTTTGAGTCTTGCTCTGGCATCCCCAGCATCTCTGATTCTCCCTCTTGGGAAAGATTATTaGACAGCCTTTCCCATGATG +
Preference number: 5 (lower is better)
Translates to: TSASLSLALASPASLILPLGKDY*TAFPMM
Trigger: CATCATGGGAAAGGCTGTCAAATAATCTTTCCCAAG...AGGGAGAATCAGAGATGCTGGGGATGCCAGAGCAAGACTCAAAGAGGCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS CAA 90 bp GAGGCAGCAGCCATCCCCAATGTGTTTCCAGGTGGGCTCGAAAACTaGCTGCCACATGAAGGCCCAGCTTCCATATGGTTCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: EAAAIPNVFPGGLEN*LPHEGPASIWFCHM
Trigger: CATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACCTGGAAACACATTGGGGATGGCTGCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS GCA 72 bp TTGCTGCCACATGAAGGCCCAGCTTCCATATGGTTCTaGCACATGCTCCCAGAAAAAGAGCACACCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LLPHEGPASIWF*HMLPEKEHTSR
Trigger: CCGGGAGGTGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 72 bp CTTGGGAAAGATTATTTGACAGCCTTTCCCATGATGTaGGGCCCAACAGGTAGCCACTTCAAGGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: LGKDYLTAFPMM*GPTGSHFKGGG
Trigger: GCCCCCTCCCTTGAAGTGGCTACCTGTTGGGCCCCACATCATGGGAAAGGCTGTCAAATAATCTTTCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS TCA 72 bp TGTGTTTCCAGGTGGGCTCGAAAACTTGCTGCCACATaGAGGCCCAGCTTCCATATGGTTCTGCCACATGCT +
Preference number: 6 (lower is better)
Translates to: CVSRWARKLAAT*RPSFHMVLPHA
Trigger: AGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTCGAGCCCACCTGGAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CCA 72 bp GAAAACTTGCTGCCACATGAAGGCCCAGCTTCCATATaGTTCTGCCACATGCTCCCAGAAAAAGAGCACACC +
Preference number: 6 (lower is better)
Translates to: ENLLPHEGPASI*FCHMLPEKEHT
Trigger: GGTGTGCTCTTTTTCTGGGAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTGGCAGCAAGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394252.4
ENST00000614691.1
CDS CAA 72 bp GAGCAAATGAGTGCCTTGGAGCTTGGGAAAGATTATTaGACAGCCTTTCCCATGATGTGGGGCCCAACAGGT +
Preference number: 6 (lower is better)
Translates to: EQMSALELGKDY*TAFPMMWGPTG
Trigger: ACCTGTTGGGCCCCACATCATGGGAAAGGCTGTCAAATAATCTTTCCCAAGCTCCAAGGCACTCATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS CAA 90 bp GTGGCTTGTTCTAATTGGAGGCTGGGGAAGGAGCAAATGAGTGCCTaGGAGCTTGGGAAAGATTATTTGACAGCCTTTCCCATGATGTGG +
Preference number: 6 (lower is better)
Translates to: VACSNWRLGKEQMSA*ELGKDYLTAFPMMW
Trigger: CCACATCATGGGAAAGGCTGTCAAATAATCTTTCCCAAGCTCCAAGGCACTCATTTGCTCCTTCCCCAGCCTCCAATTAGAACAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4
CDS CAA 72 bp TCTAATTGGAGGCTGGGGAAGGAGCAAATGAGTGCCTaGGAGCTTGGGAAAGATTATTTGACAGCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: SNWRLGKEQMSA*ELGKDYLTAFP
Trigger: GGGAAAGGCTGTCAAATAATCTTTCCCAAGCTCCAAGGCACTCATTTGCTCCTTCCCCAGCCTCCAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394252.4