RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL7A (Homo sapiens)

Ensembl gene IDs: ENSG00000185432

Ensembl transcript IDs: ENST00000332160.5, ENST00000547104.1, ENST00000548553.1, ENST00000550097.1, ENST00000550502.1

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAAATAAGACAACTGGGGTAACCCATTTCTCCAGGACCCCTCTCTaGAACAGAGAGCTATTCTCTTTCTTTGGCCTAGTAAACCTCTGC +
Preference number: 1 (lower is better)
Translates to: LNKTTGVTHFSRTPL*NRELFSFFGLVNLC
Trigger: GCAGAGGTTTACTAGGCCAAAGAAAGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGAGAAATGGGTTACCCCAGTTGTCTTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR GCA 90 bp CTCGCTTTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTaGAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGAATTAGAT +
Preference number: 1 (lower is better)
Translates to: LAFRGTCDDFHSFHS*KEQRNHLPTGVELD
Trigger: ATCTAATTCCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAAAGCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR GCA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACCCGCGAGGTGGAGGTTaGAGTGAGCGGAGATCACGT +
Preference number: 2 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHPRGGG*SERRSR
Trigger: ACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGG...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR TCA 90 bp TTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGAGGTGGAGGTTGCAGTaGGCGGAGATCACGTCATTG +
Preference number: 2 (lower is better)
Translates to: FTASIVAKNKEIIFQQGWRWRLQ*AEITSL
Trigger: CAATGACGTGATCTCCGCTCACTGCAACCTCCACCT...CCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR TCA 90 bp ATGGGTAACCATTTAAATAAGACAACTGGGGTAACCCATTTCTCCAGGACCCCTCTGAGGTCAGGAATTTaGGACCAGACTGACCAACGT +
Preference number: 2 (lower is better)
Translates to: MGNHLNKTTGVTHFSRTPLRSGI*DQTDQR
Trigger: ACGTTGGTCAGTCTGGTCTCAAATTCCTGACCTCAG...AGGGGTCCTGGAGAAATGGGTTACCCCAGTTGTCTTATTTAAATGGTTACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR TCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAGGCAGGCAGATCACCTaGGGTCAGGAATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRGRQIT*GQEFET
Trigger: GGTCTCAAATTCCTGACCTCAGGTGATCTGCCTGCC...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR GCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGACGGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRRRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCCG...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR GCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGCGGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGRRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCCG...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR GCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCACCGCGAGGTGGAGGTTaGAGTGAGCGGAGATCACGT +
Preference number: 2 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPPRGGG*SERRSR
Trigger: ACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGG...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR GCA 90 bp GATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACACCGCGAGGTGGAGGTTaGAGTGAGCGGAGATCACGT +
Preference number: 2 (lower is better)
Translates to: DDFHSFHSCKEQRNHLPTPRGGG*SERRSR
Trigger: ACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGG...TGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR CCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGTTTGGGAGGCTGAGGTaGGTGGATTGCCTGAGATCA +
Preference number: 2 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRFGRLR*VDCLRS
Trigger: TGATCTCAGGCAATCCACCCACCTCAGCCTCCCAAA...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CCA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTTTGGGAGGCTGAGGTaGGTGGATTGCCTGAGATCA +
Preference number: 2 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTFGRLR*VDCLRS
Trigger: TGATCTCAGGCAATCCACCCACCTCAGCCTCCCAAA...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR TCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACAGGTGGAGGTTGCAGTaGGCGGAGATCACGTCATTG +
Preference number: 2 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDRWRLQ*AEITSL
Trigger: CAATGACGTGATCTCCGCTCACTGCAACCTCCACCT...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR TCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGAATTTGAGACCAGACTaGCCAACGTGGGGAAACACC +
Preference number: 2 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRNLRPD*PTWGNT
Trigger: GGTGTTTCCCCACGTTGGTCAGTCTGGTCTCAAATT...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR TCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTGGCAGGCAGATCACCTaGGGTCAGGAATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFGRQIT*GQEFET
Trigger: GGTCTCAAATTCCTGACCTCAGGTGATCTGCCTGCC...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR GCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAACTGAGATCACAGCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQLRSQH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGCTGTGATCTCAG...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CCA 90 bp ATGGGTAACCATTTAAATAAGACAACTGGGGTAACCCATTTCTCCAGGACCCCTGCTATTCTCTTTCTTTaGCCTAGTAAACCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: MGNHLNKTTGVTHFSRTPAILFL*PSKPLL
Trigger: GAGCAGAGGTTTACTAGGCCAAAGAAAGAGAATAGC...AGGGGTCCTGGAGAAATGGGTTACCCCAGTTGTCTTATTTAAATGGTTACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR TCA 90 bp TACAAACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAATTTGAGACCAGACTaGCCAACGTGGGGAAACACC +
Preference number: 2 (lower is better)
Translates to: YKPLQKILNPLTNLTLAFNLRPD*PTWGNT
Trigger: GGTGTTTCCCCACGTTGGTCAGTCTGGTCTCAAATT...GAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR GCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCACTGAGATCACAGCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPLRSQH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGCTGTGATCTCAG...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR GCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATTCCAGGACCCCTCTCTaGAACAGAGAGCTATTCTCT +
Preference number: 2 (lower is better)
Translates to: QPCMLILKARPVTLRITNSRTPL*NRELFS
Trigger: AGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGA...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCTTTAGGAGGTCAAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: EALVMIFTASIVAKNKEIFRRSR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAA...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR CCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAAAAATACAAATTAGCTaGGCATGGTGGTGGGCACCT +
Preference number: 2 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQKIQIS*AWWWAP
Trigger: AGGTGCCCACCACCATGCCCAGCTAATTTGTATTTT...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAAAATACAAATTAGCTaGGCATGGTGGTGGGCACCT +
Preference number: 2 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRKIQIS*AWWWAP
Trigger: AGGTGCCCACCACCATGCCCAGCTAATTTGTATTTT...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR TCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATTGTTTTTCAGAAACTTaGGCTATTTCGGCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: QPCMLILKARPVTLRITNCFSET*AISARC
Trigger: GCACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACA...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
3UTR-3UTR TCA 90 bp GATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACACTTTATCTTAAGACTTaGGAACTGGAATGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: DDFHSFHSCKEQRNHLPTLYLKT*ELECRK
Trigger: TTTCCTGCATTCCAGTTCTCAAGTCTTAAGATAAAG...TGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
3UTR GCA 72 bp ACAACTGGGGTAACCCATTTCTCCAGGACCCCTCTCTaGAACAGAGAGCTATTCTCTTTCTTTGGCCTAGTA +
Preference number: 3 (lower is better)
Translates to: TTGVTHFSRTPL*NRELFSFFGLV
Trigger: TACTAGGCCAAAGAAAGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGAGAAATGGGTTACCCCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CAA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGAGGCAGGTGAATCACTaGAACCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRRQVNH*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGTGATTCACCTGCCT...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CAA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTAGGCAGGTGAATCACTaGAACCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFRQVNH*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGTGATTCACCTGCCT...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR-3UTR CAA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATAGTCGACTGTTTCCTTaGAAGGGGGAGTTCAAAGCT +
Preference number: 3 (lower is better)
Translates to: QPCMLILKARPVTLRITNSRLFP*KGEFKA
Trigger: AGCTTTGAACTCCCCCTTCAAAGGAAACAGTCGACT...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
3UTR CCA 72 bp GACTTGAGAACTGGAATGCAGGAAAACAAACTTTGGTaGAATACTGGAATAAAAGACATAAAGCTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: DLRTGMQENKLW*NTGIKDIKLGR
Trigger: TCTGCCCAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGCAGGACAGTGGGGCCTaGATGTGCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FTASIVAKNKEIIFQQGWQDSGA*MCCSFS
Trigger: GCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTG...CCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTCCGCGAGGTGGAGGTTaGAGTGAGCGGAGATCACGT +
Preference number: 4 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTPRGGG*SERRSR
Trigger: ACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGG...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACGAGCCATCAGCCACCTaGTGCATGTTCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHEPSAT*CMFSPA
Trigger: TGCCGGGGAGAACATGCACCAGGTGGCTGATGGCTC...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGAGCCATCAGCCACCTaGTGCATGTTCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQREPSAT*CMFSPA
Trigger: TGCCGGGGAGAACATGCACCAGGTGGCTGATGGCTC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACCAGGACAGTGGGGCCTaGATGTGCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHQDSGA*MCCSFS
Trigger: GCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTG...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCAACTCCCAGGACAGTaGGGCCTGGATGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRQLPGQ*GLDVLQ
Trigger: CTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTG...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGGGCCCGCAAACTCCTaGAGGTTACTGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRGPANS*RLLKSS
Trigger: GGAGCTCTTCAGTAACCTGCAGGAGTTTGCGGGCCC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGGGGGCCTGGATGTGCTaGAGCTTCAGCTTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FTASIVAKNKEIIFQQGWGAWMC*SFSLEK
Trigger: CTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCC...CCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGAGCCATCAGCCACCTaGTGCATGTTCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGEPSAT*CMFSPA
Trigger: TGCCGGGGAGAACATGCACCAGGTGGCTGATGGCTC...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAACAGGACAGTGGGGCCTaGATGTGCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQQDSGA*MCCSFS
Trigger: GCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTG...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCCAGGACAGTGGGGCCTaGATGTGCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEIQDSGA*MCCSFS
Trigger: GCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTG...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCCAACTCCCAGGACAGTaGGGCCTGGATGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEIQLPGQ*GLDVLQ
Trigger: CTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTG...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACCTGCCACATGCTCCATaGAATAGAAAGCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHLPHAP*NRKPLP
Trigger: CGGGAGGGGCTTTCTATTTCATGGAGCATGTGGCAG...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATCTGCCACATGCTCCATaGAATAGAAAGCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDLPHAP*NRKPLP
Trigger: CGGGAGGGGCTTTCTATTTCATGGAGCATGTGGCAG...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAGGGCCCGCAAACTCCTaGAGGTTACTGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRGPANS*RLLKSS
Trigger: GGAGCTCTTCAGTAACCTGCAGGAGTTTGCGGGCCC...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCGGGCCCGCAAACTCCTaGAGGTTACTGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEIGPANS*RLLKSS
Trigger: GGAGCTCTTCAGTAACCTGCAGGAGTTTGCGGGCCC...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGCCATCAGCCACCTGGTaGATGTTCTCCCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLPSATW*MFSPAA
Trigger: AGCTGCCGGGGAGAACATGCACCAGGTGGCTGATGG...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATGGGGCCTGGATGTGCTaGAGCTTCAGCTTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDGAWMC*SFSLEK
Trigger: CTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCC...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGGGGCCTGGATGTGCTaGAGCTTCAGCTTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRGAWMC*SFSLEK
Trigger: CTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATCGGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDRRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCCG...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCGCGAGGTGGAGGTTaGAGTGAGCGGAGATCACGT +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFPRGGG*SERRSR
Trigger: ACGTGATCTCCGCTCACTGCAACCTCCACCTCGCGG...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGGGGCACAGTGGTGGGTaGCCATGGTCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLGHSGG*PWSQLL
Trigger: CAGTAGCTGAGACCATGGGCACCCACCACTGTGCCC...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATCAACTCCCAGGACAGTaGGGCCTGGATGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPCMLILKARPVTLRITNQLPGQ*GLDVLQ
Trigger: CTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTG...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTAGTGGTGGGTGCCCATaGTCTCAGCTACTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPSGGCP*SQLLRS
Trigger: GCTCCTCAGTAGCTGAGACCATGGGCACCCACCACT...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAACGAATCTGGGCACAGTaGTGGGTGCCCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQRIWAQ*WVPMVS
Trigger: TGAGACCATGGGCACCCACCACTGTGCCCAGATTCG...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGACTGCCACATGCTCCATaGAATAGAAAGCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGLPHAP*NRKPLP
Trigger: CGGGAGGGGCTTTCTATTTCATGGAGCATGTGGCAG...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCCTGCCACATGCTCCATaGAATAGAAAGCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEILPHAP*NRKPLP
Trigger: CGGGAGGGGCTTTCTATTTCATGGAGCATGTGGCAG...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGGGGCCCGCAAACTCCTaGAGGTTACTGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLGPANS*RLLKSS
Trigger: GGAGCTCTTCAGTAACCTGCAGGAGTTTGCGGGCCC...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCTGAGATCACAGCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRLRSQH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGCTGTGATCTCAG...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAACGCGTCGGGTTGTCCTaGCTTTCTGGACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQRVGLS*LSGLNQ
Trigger: TTGGTTCAGTCCAGAAAGGCAGGACAACCCGACGCG...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp ACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCAACTCCCAGGACAGTaGGGCCTGGATGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGMQENKLWWNTGIKDIKQLPGQ*GLDVLQ
Trigger: CTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTG...CTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGATCTGGGCACAGTGGTaGGTGCCCATGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLIWAQW*VPMVSA
Trigger: AGCTGAGACCATGGGCACCCACCACTGTGCCCAGAT...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGAAGAAAGCCCGAATCTaGGCACAGTGGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLKKARI*AQWWVP
Trigger: GGGCACCCACCACTGTGCCCAGATTCGGGCTTTCTT...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTAGGTGGAGGTTGCAGTaGGCGGAGATCACGTCATTG +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFRWRLQ*AEITSL
Trigger: CAATGACGTGATCTCCGCTCACTGCAACCTCCACCT...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATCATGGTCTCAGCTACTaGGGAGCTAAGACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDHGLSY*GAKTEA
Trigger: TGCTTCTGTCTTAGCTCCTCAGTAGCTGAGACCATG...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTAACCAAGCTGTACCCTaGCCACCTTGGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPNQAVP*PPWAHV
Trigger: AACATGTGCCCAAGGTGGTCAGGGTACAGCTTGGTT...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR GCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGCCATCAAACAGAAGGTaGCAGGCAGGATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGPSNRR*QAGSRT
Trigger: AGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGG...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCCCATCAAACAGAAGGTaGCAGGCAGGATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEIPSNRR*QAGSRT
Trigger: AGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGG...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TACAAACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCGGGGCCTGGATGTGCTaGAGCTTCAGCTTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YKPLQKILNPLTNLTLAFGAWMC*SFSLEK
Trigger: CTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCC...GAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGCGGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLRRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCCG...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332160.5
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGACCCGACTCCTTTAATTaGAGGAGAGAGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGPDSFN*RREASG
Trigger: GCCAGAAGCCTCTCTCCTGCAATTAAAGGAGTCGGG...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAACCTTCCAGCTCTCTCTaGTCAGGTTGCACCCATCAA +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQPSSSL*SGCTHQ
Trigger: TTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGG...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTCCTTCCAGCTCTCTCTaGTCAGGTTGCACCCATCAA +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPPSSSL*SGCTHQ
Trigger: TTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGG...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAATTTGGGAGGCTGAGGTaGGTGGATTGCCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQFGRLR*VDCLRS
Trigger: TGATCTCAGGCAATCCACCCACCTCAGCCTCCCAAA...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGTTTGGGAGGCTGAGGTaGGTGGATTGCCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGFGRLR*VDCLRS
Trigger: TGATCTCAGGCAATCCACCCACCTCAGCCTCCCAAA...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCAGGAGAGAGGCTTCTaGCCACACTCCAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFQERGF*PHSRAN
Trigger: ATTGGCTCTGGAGTGTGGCCAGAAGCCTCTCTCCTG...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTCTGAGGTCAGGAATTTaGGACCAGACTGACCAACGT +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPLRSGI*DQTDQR
Trigger: ACGTTGGTCAGTCTGGTCTCAAATTCCTGACCTCAG...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR TCA 90 bp TTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGTGTTTTTCAGAAACTTaGGCTATTTCGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FTASIVAKNKEIIFQQGWCFSET*AISARC
Trigger: GCACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACA...CCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGACTCACAGATTGCTTaGTGTTTAGGGGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRDSQIA*CLGALT
Trigger: GGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACCCATCAAACAGAAGGTaGCAGGCAGGATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDPSNRR*QAGSRT
Trigger: AGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGG...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGCTGAGATCACAGCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLLRSQH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGCTGTGATCTCAG...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTTCCAGGACCCCTCTCTaGAACAGAGAGCTATTCTCT +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPSRTPL*NRELFS
Trigger: AGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGA...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATCAGGCTAGAGTACAATaGCATGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDQARVQ*HDLGSL
Trigger: CAGTGAACCGAGATCATGCCATTGTACTCTAGCCTG...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTTTAGGAGGTCAAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTFRRSR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAA...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTAATTTGAGACCAGACTaGCCAACGTGGGGAAACACC +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFNLRPD*PTWGNT
Trigger: GGTGTTTCCCCACGTTGGTCAGTCTGGTCTCAAATT...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR TCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACCTGAGGTCAGGAATTTaGGACCAGACTGACCAACGT +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDLRSGI*DQTDQR
Trigger: ACGTTGGTCAGTCTGGTCTCAAATTCCTGACCTCAG...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR TCA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGACTCACAGATTGCTTaGTGTTTAGGGGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQDSQIA*CLGALT
Trigger: GGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTC...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGAGACTCACAGATTGCTTaGTGTTTAGGGGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGDSQIA*CLGALT
Trigger: GGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTC...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACACCATCAAACAGAAGGTaGCAGGCAGGATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: DDFHSFHSCKEQRNHLPTPSNRR*QAGSRT
Trigger: AGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGG...TGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGSLWSG*THQTEG
Trigger: ACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGA...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPSLWSG*THQTEG
Trigger: ACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGA...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TACAAACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCTCCAGGACCCCTCTCTaGAACAGAGAGCTATTCTCT +
Preference number: 4 (lower is better)
Translates to: YKPLQKILNPLTNLTLAFSRTPL*NRELFS
Trigger: AGAGAATAGCTCTCTGTTGCAGAGAGGGGTCCTGGA...GAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGTCTTTAGTAGGGTTTTaGCATGTTGGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGSLVGF*HVGQAG
Trigger: ACCAGCCTGGCCAACATGGCAAAACCCTACTAAAGA...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTCCAGAGCCAATCAGCTaGAGAGGAGAAAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPPEPIS*RGEKEL
Trigger: CAGTTCTTTTTCTCCTCTGCAGCTGATTGGCTCTGG...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGACAGGCTAGAGTACAATaGCATGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGQARVQ*HDLGSL
Trigger: CAGTGAACCGAGATCATGCCATTGTACTCTAGCCTG...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGTTTAGGAGGTCAAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGFRRSR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAA...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp GATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAAATTTGAGACCAGACTaGCCAACGTGGGGAAACACC +
Preference number: 4 (lower is better)
Translates to: DDFHSFHSCKEQRNHLPTNLRPD*PTWGNT
Trigger: GGTGTTTCCCCACGTTGGTCAGTCTGGTCTCAAATT...TGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCAGTCGAACACTCAGCTaGCACATGCTCCATGAAATA +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEISRTLS*HMLHEI
Trigger: TATTTCATGGAGCATGTGGCAGCTGAGTGTTCGACT...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: QPCMLILKARPVTLRITNSLWSG*THQTEG
Trigger: ACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGA...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFSLWSG*THQTEG
Trigger: ACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGA...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGTCTTTAGTAGGGTTTTaGCATGTTGGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLSLVGF*HVGQAG
Trigger: ACCAGCCTGGCCAACATGGCAAAACCCTACTAAAGA...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTAGTCAGTTTGTGGGCTaGCCTTCTTTTAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTSQFVG*PSFKGQ
Trigger: TTGTCCTTTAAAAGAAGGGCAGCCCACAAACTGACT...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTAAAATACAAATTAGCTaGGCATGGTGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPKIQIS*AWWWAP
Trigger: AGGTGCCCACCACCATGCCCAGCTAATTTGTATTTT...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGAAAAATACAAATTAGCTaGGCATGGTGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGKIQIS*AWWWAP
Trigger: AGGTGCCCACCACCATGCCCAGCTAATTTGTATTTT...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACGCTATTCTCTTTCTTTaGCCTAGTAAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHAILFL*PSKPLL
Trigger: GAGCAGAGGTTTACTAGGCCAAAGAAAGAGAATAGC...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGCTATTCTCTTTCTTTaGCCTAGTAAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRAILFL*PSKPLL
Trigger: GAGCAGAGGTTTACTAGGCCAAAGAAAGAGAATAGC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACCAGGCTAGAGTACAATaGCATGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDQARVQ*HDLGSL
Trigger: CAGTGAACCGAGATCATGCCATTGTACTCTAGCCTG...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATCAGGCTAGAGTACAATaGCATGATCTCGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: QPCMLILKARPVTLRITNQARVQ*HDLGSL
Trigger: CAGTGAACCGAGATCATGCCATTGTACTCTAGCCTG...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGTTTAGGAGGTCAAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLFRRSR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAA...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACTTTAGGAGGTCAAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDFRRSR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTTGACCTCCTAAA...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATTGGAAAGTCAAATCATaGGCAAGAGGCCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDWKVKS*ARGQFC
Trigger: GCAAAATTGGCCTCTTGCCCATGATTTGACTTTCCA...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACTGTTTTTCAGAAACTTaGGCTATTTCGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDCFSET*AISARC
Trigger: GCACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACA...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAGACTCACAGATTGCTTaGTGTTTAGGGGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPDSQIA*CLGALT
Trigger: GGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTC...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGACATTCAGCTCTTAACTaGCAGCTCACACTATTTCAC +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGHSALN*QLTLFH
Trigger: GTGAAATAGTGTGAGCTGGCAGTTAAGAGCTGAATG...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGATACAGACTCACAGATTaGTTGATGTTTAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRYRLTD*LMFRGS
Trigger: AGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTA...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCTACAGACTCACAGATTaGTTGATGTTTAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EALVMIFTASIVAKNKEIYRLTD*LMFRGS
Trigger: AGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTA...GATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CCA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTAAGGAAGTCAGTTTGTaGGCTGCCCTTCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPKEVSL*AALLLK
Trigger: CTTTAAAAGAAGGGCAGCCCACAAACTGACTTCCTT...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGCTGTGTCACAGGACATaGTCACTCATATTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLLCHRT*SLIFGS
Trigger: TGAGCCAAATATGAGTGACCATGTCCTGTGACACAG...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACAAGAACTGGCTGTGCTaGAAAGTCAAATCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDKNWLC*KVKSWA
Trigger: TGCCCATGATTTGACTTTCCAGCACAGCCAGTTCTT...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp ACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGTGTTTTTCAGAAACTTaGGCTATTTCGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGMQENKLWWNTGIKDIKCFSET*AISARC
Trigger: GCACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACA...CTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTCTTTATCTTAAGACTTaGGAACTGGAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTLYLKT*ELECRK
Trigger: TTTCCTGCATTCCAGTTCTCAAGTCTTAAGATAAAG...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGACCTGCCTTTCTGGACTaGACCAATGTATTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRPAFLD*TNVFLK
Trigger: TTTAAGAAATACATTGGTTCAGTCCAGAAAGGCAGG...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR TCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATTTCATAAGGCAAAATaGGAAGGTTCCCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGFHKAK*EGSQLF
Trigger: GAAAAGCTGGGAACCTTCTCATTTTGCCTTATGAAA...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR GCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAAGTCGAACACTCAGCTaGCACATGCTCCATGAAATA +
Preference number: 4 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPSRTLS*HMLHEI
Trigger: TATTTCATGGAGCATGTGGCAGCTGAGTGTTCGACT...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGCATTCAGCTCTTAACTaGCAGCTCACACTATTTCAC +
Preference number: 4 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLHSALN*QLTLFH
Trigger: GTGAAATAGTGTGAGCTGGCAGTTAAGAGCTGAATG...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATCATTCAGCTCTTAACTaGCAGCTCACACTATTTCAC +
Preference number: 4 (lower is better)
Translates to: QPCMLILKARPVTLRITNHSALN*QLTLFH
Trigger: GTGAAATAGTGTGAGCTGGCAGTTAAGAGCTGAATG...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACTACAGACTCACAGATTaGTTGATGTTTAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDYRLTD*LMFRGS
Trigger: AGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTA...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAGCAAGAGGCCAATTTTaGCTAATAGATGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPARGQF*LIDVWQ
Trigger: CTGCCAAACATCTATTAGGCAAAATTGGCCTCTTGC...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCATGCCTAATAGATGTTTaGCAGCAGTCGATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPCLIDV*QQSIQL
Trigger: AAGCTGAATCGACTGCTGCCAAACATCTATTAGGCA...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
3UTR CAA 72 bp TTAAGACTTGAGAACTGGAATGCAGGAAAACAAACTTaGGTGGAATACTGGAATAAAAGACATAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRLENWNAGKQT*VEYWNKRHKAG
Trigger: CCCAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAAGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR TCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCTTTATCTTAAGACTTaGGAACTGGAATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFLYLKT*ELECRK
Trigger: TTTCCTGCATTCCAGTTCTCAAGTCTTAAGATAAAG...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR GCA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATTAAGACCTTTTCACTaGTCCCTTTTTAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGLRPFH*SLFKVF
Trigger: GAAGACTTTAAAAAGGGAGCAGTGAAAAGGTCTTAA...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR GCA 90 bp TACAAACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCTCAGTCTTCAAAATGTaGCTAACTACTCGATTACTC +
Preference number: 4 (lower is better)
Translates to: YKPLQKILNPLTNLTLAFSVFKM*LTTRLL
Trigger: GAGTAATCGAGTAGTTAGGCACATTTTGAAGACTGA...GAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CCA 90 bp GATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTTCCTCAGAAGGAAAGTaGATTATAATCCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: DCLMFRGSYLGYLIIQGFSSEGK*IIILYS
Trigger: GGAATAAAGGATTATAATCCACTTTCCTTCTGAGGA...AAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR GCA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCATTAAGACCTTTTCACTaGTCCCTTTTTAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPLRPFH*SLFKVF
Trigger: GAAGACTTTAAAAAGGGAGCAGTGAAAAGGTCTTAA...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS GCA 90 bp AGAAGCTGGCCCGCTCCAGGGCCTTCCAGCTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGTGCCAGGCAGGATCCAGGACTTGTT +
Preference number: 5 (lower is better)
Translates to: RSWPAPGPSSSLWSG*THQTEGARQDPGLV
Trigger: AACAAGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGGCCCTGGAGCGGGCCAGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CCA 90 bp CAGTGTACTTACACCCCACCGGGCTCTCCAGTGACCTCTATAACCTaGAAGCTCCCTGCCTCGCGTCGGGTTGTCCTGCCTTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: QCTYTPPGSPVTSIT*KLPASRRVVLPFWT
Trigger: AGTCCAGAAAGGCAGGACAACCCGACGCGAGGCAGGGAGCTTCCAGGTTATAGAGGTCACTGGAGAGCCCGGTGGGGTGTAAGTACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CCA 90 bp CACAGCATATCCATAGATATGAGGGCGCACCAACTCCCAGGACAGTaGGGCCTGGATGTGCTGCAGCTTCAGCTTAGAGAAGCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: HSISIDMRAHQLPGQ*GLDVLQLQLREAGP
Trigger: CGGGCCAGCTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTGGTGCGCCCTCATATCTATGGATATGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS GCA 90 bp CAGGATGTAAATGGCCAGTCTCAGGATAAAGATGGTAAGCTCCATTaGTATAACCTGGAAGCTCCCTGCCTCGCGTCGGGTTGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: QDVNGQSQDKDGKLH*YNLEAPCLASGCPA
Trigger: GGCAGGACAACCCGACGCGAGGCAGGGAGCTTCCAGGTTATAGCAATGGAGCTTACCATCTTTATCCTGAGACTGGCCATTTACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550502.1
CDS CCA 90 bp ATGGCCAGTCTCAGGATAAAGATGGTAAGCTCCATTGCTATAACCTaGAAGCTCCCTGCCTCGCGTCGGGTTGTCCTGCCTTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: MASLRIKMVSSIAIT*KLPASRRVVLPFWT
Trigger: AGTCCAGAAAGGCAGGACAACCCGACGCGAGGCAGGGAGCTTCCAGGTTATAGCAATGGAGCTTACCATCTTTATCCTGAGACTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550502.1
CDS CCA 90 bp CATCCATCCGCTTTTTACAAGAAAGCCCGAATCTGGGCACAGTGGTaGGTGCCCATGGTCTCAGCTACTGAGGAGCTAAGACAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: HPSAFYKKARIWAQW*VPMVSATEELRQKH
Trigger: ATGCTTCTGTCTTAGCTCCTCAGTAGCTGAGACCATGGGCACCCACCACTGTGCCCAGATTCGGGCTTTCTTGTAAAAAGCGGATGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CCA 90 bp AAGCATCCATCCGCTTTTTACAAGAAAGCCCGAATCTGGGCACAGTaGTGGGTGCCCATGGTCTCAGCTACTGAGGAGCTAAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: KHPSAFYKKARIWAQ*WVPMVSATEELRQK
Trigger: CTTCTGTCTTAGCTCCTCAGTAGCTGAGACCATGGGCACCCACCACTGTGCCCAGATTCGGGCTTTCTTGTAAAAAGCGGATGGATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS GCA 90 bp ATCCAGGACTTGTTGCCAGAAGTAATTCCAAGTCGAACACTCAGCTaGCACATGCTCCATGAAATAGAAAGCCCCTCCCGGTCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: IQDLLPEVIPSRTLS*HMLHEIESPSRSQH
Trigger: GTGCTGAGACCGGGAGGGGCTTTCTATTTCATGGAGCATGTGGCAGCTGAGTGTTCGACTTGGAATTACTTCTGGCAACAAGTCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS GCA 90 bp AATTGCAGGAGAGAGGCTTCTGGCCACACTCCAGAGCCAATCAGCTaGAGAGGAGAAAAAGAACTGGCTGTGCTGGAAAGTCAAATCATG +
Preference number: 5 (lower is better)
Translates to: NCRREASGHTPEPIS*RGEKELAVLESQIM
Trigger: CATGATTTGACTTTCCAGCACAGCCAGTTCTTTTTCTCCTCTGCAGCTGATTGGCTCTGGAGTGTGGCCAGAAGCCTCTCTCCTGCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CCA 90 bp GCTGCAGAGGAGAAAAAGAACTGGCTGTGCTGGAAAGTCAAATCATaGGCAAGAGGCCAATTTTGCCTAATAGATGTTTGGCAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: AAEEKKNWLCWKVKS*ARGQFCLIDVWQQS
Trigger: CGACTGCTGCCAAACATCTATTAGGCAAAATTGGCCTCTTGCCCATGATTTGACTTTCCAGCACAGCCAGTTCTTTTTCTCCTCTGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATAGGCAGGTGAATCACTaGAACCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDRQVNH*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGTGATTCACCTGCCT...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CAA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACAGGCAGGTGAATCACTaGAACCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHRQVNH*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGTGATTCACCTGCCT...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CAA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHLSLVR*HPSNRR
Trigger: CCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAG...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPLSLVR*HPSNRR
Trigger: CCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAG...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGLSLVR*HPSNRR
Trigger: CCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAG...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACATCTTTAGTAGGGTTTaGCCATGTTGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHIFSRV*PCWPGW
Trigger: CCAGCCTGGCCAACATGGCAAAACCCTACTAAAGAT...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CAA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGAGGCAGGATCCAGGACTaGTTGCCAGAAGTAATTCCA +
Preference number: 5 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGGRIQD*LPEVIP
Trigger: TGGAATTACTTCTGGCAACAAGTCCTGGATCCTGCC...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: QPCMLILKARPVTLRITNLSLVR*HPSNRR
Trigger: CCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAG...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGAGGATCCAGGACTTGTaGCCAGAAGTAATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRRIQDL*PEVIPS
Trigger: ACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCT...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGAGTCGACTGTTTCCTTaGAAGGGGGAGTTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGSRLFP*KGEFKA
Trigger: AGCTTTGAACTCCCCCTTCAAAGGAAACAGTCGACT...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CAA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATATCTTTAGTAGGGTTTaGCCATGTTGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QPCMLILKARPVTLRITNIFSRV*PCWPGW
Trigger: CCAGCCTGGCCAACATGGCAAAACCCTACTAAAGAT...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332160.5
ENST00000548553.1
CDS-3UTR CAA 90 bp ATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACAGACTCACAGATTGCTaGATGTTTAGGGGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: IAENIKPSNQPNTRFQRHRLTDC*MFRGSY
Trigger: GTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCT...GTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTAGACTCACAGATTGCTaGATGTTTAGGGGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTRLTDC*MFRGSY
Trigger: GTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCT...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp ATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTGTGATGATAGACAGAAGCATACCTaGAGCCCAGGAATTCAAATC +
Preference number: 5 (lower is better)
Translates to: ILNPLTNLTLAFRGTCDDRQKHT*SPGIQI
Trigger: GATTTGAATTCCTGGGCTCAAGGTATGCTTCTGTCT...ATCATCACAAGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp TGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAGGTTTTCCTCTCAAGGAAGTCAGTTaGTGGGCTGCCCTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: CLMFRGSYLGYLIIQGFPLKEVS*WAALLL
Trigger: TAAAAGAAGGGCAGCCCACAAACTGACTTCCTTGAG...AGGAAAACCTTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp ACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGTGTACCCTGACCACCTaGGGCACATGTTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: TGMQENKLWWNTGIKDIKCTLTT*GTCSQD
Trigger: ATCCTGAGAACATGTGCCCAAGGTGGTCAGGGTACA...CTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTTGCCTAATAGATGTTaGGCAGCAGTCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTLPNRC*AAVDSA
Trigger: AGCTGAATCGACTGCTGCCAAACATCTATTAGGCAA...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAGGATCCAGGACTTGTaGCCAGAAGTAATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRRIQDL*PEVIPS
Trigger: ACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCT...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTTGTTTTTCAGAAACTaGAGCTATTTCGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTLFFRN*SYFGQV
Trigger: CACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACAA...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp CTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGATACCTAATTATTCAAAGACTCACAGATTGCTaGATGTTTAGGGGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: LTDCLMFRGSYLGYLIIQRLTDC*MFRGSY
Trigger: GTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCT...TTGAATAATTAGGTATCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACAGGATCCAGGACTTGTaGCCAGAAGTAATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDRIQDL*PEVIPS
Trigger: ACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCT...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp GATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGTTGTTTTTCAGAAACTaGAGCTATTTCGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: DFHSFHSCKEQRNHLPTGLFFRN*SYFGQV
Trigger: CACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACAA...CCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTCAGAGGCACTTGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGATTGTTTTTCAGAAACTaGAGCTATTTCGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FRGTCDDFHSFHSCKEQRLFFRN*SYFGQV
Trigger: CACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACAA...TCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACAAGTGCCTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAACAGGGGTGGGCAGGAAAACAAACTTaGGTGGAATACTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: FTASIVAKNKEIIFQQGWAGKQT*VEYWNK
Trigger: TTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGC...CCACCCCTGTTGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp GGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGCTGAGACTCACAGATTGCTaGATGTTTAGGGGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: GMQENKLWWNTGIKDIKLRLTDC*MFRGSY
Trigger: GTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCT...CAGCTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTGAGAACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACCCAGAATATTCACATTaGGGAGCCAAAGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: LRTGMQENKLWWNTGIKDPEYSH*GAKGIQ
Trigger: CTGAATCCCTTTGGCTCCCAAATGTGAATATTCTGG...GTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp ACTGGAATGCAGGAAAACAAACTTTGGTGGAATACTGGAATAAAAGACATAAAGAGGATCCAGGACTTGTaGCCAGAAGTAATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: TGMQENKLWWNTGIKDIKRIQDL*PEVIPS
Trigger: ACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCT...CTTTATGTCTTTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGCATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp CAACCTTGTATGTTAATTCTGAAAGCCAGACCAGTGACGCTAAGAATAACAAATTTGTTTTTCAGAAACTaGAGCTATTTCGGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: QPCMLILKARPVTLRITNLFFRN*SYFGQV
Trigger: CACCTGGCCGAAATAGCTCAAGTTTCTGAAAAACAA...ATTTGTTATTCTTAGCGTCACTGGTCTGGCTTTCAGAATTAACATACAAGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp ACCATTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGGCAGGAAAACAAACTTaGGTGGAATACTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: TIAENIKPSNQPNTRFQRAGKQT*VEYWNK
Trigger: TTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGC...CCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TTGCAGAAAATATTAAACCCTCTAACCAACCTAACACTCGCTTTCAGAGGCACTTTTAAAATCACTGTTTaGGGCTGTACTTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: LQKILNPLTNLTLAFRGTFKITV*GCTSPF
Trigger: AAAAGGGGAAGTACAGCCCAAAACAGTGATTTTAAA...AGTGCCTCTGAAAGCGAGTGTTAGGTTGGTTAGAGGGTTTAATATTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS-3UTR CAA 90 bp TTATTTCTTTACAGACTCACAGATTGCTTGATGTTTAGGGGCTCTTACCTAGGAGCAGGAAAACAAACTTaGGTGGAATACTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: LFLYRLTDCLMFRGSYLGAGKQT*VEYWNK
Trigger: TTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGC...TCCTAGGTAAGAGCCCCTAAACATCAAGCAATCTGTGAGTCTGTAAAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS-3UTR CAA 90 bp TGTGATGATTTTCACAGCTTCCATAGTTGCAAAGAACAAAGAAATCATCTTCCAGCAGGAAAACAAACTTaGGTGGAATACTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: CDDFHSFHSCKEQRNHLPAGKQT*VEYWNK
Trigger: TTTATTCCAGTATTCCACCAAAGTTTGTTTTCCTGC...TGGAAGATGATTTCTTTGTTCTTTGCAACTATGGAAGCTGTGAAAATCATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS GCA 72 bp CGCACCAACTCCCAGGACAGTGGGGCCTGGATGTGCTaGAGCTTCAGCTTAGAGAAGCTGGCCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RTNSQDSGAWMC*SFSLEKLARSR
Trigger: CCTGGAGCGGGCCAGCTTCTCTAAGCTGAAGCTGCAGCACATCCAGGCCCCACTGTCCTGGGAGTTGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CCA 72 bp TACACCCCACCGGGCTCTCCAGTGACCTCTATAACCTaGAAGCTCCCTGCCTCGCGTCGGGTTGTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: YTPPGSPVTSIT*KLPASRRVVLP
Trigger: AGGCAGGACAACCCGACGCGAGGCAGGGAGCTTCCAGGTTATAGAGGTCACTGGAGAGCCCGGTGGGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CAA 72 bp GCCCGCTCCAGGGCCTTCCAGCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGGTGCCAGGCAGGATCC +
Preference number: 6 (lower is better)
Translates to: ARSRAFQLSLVR*HPSNRRCQAGS
Trigger: GGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGGCCCTGGAGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS GCA 72 bp CCCGCTCCAGGGCCTTCCAGCTCTCTCTGGTCAGGTTaGACCCATCAAACAGAAGGTGCCAGGCAGGATCCA +
Preference number: 6 (lower is better)
Translates to: PAPGPSSSLWSG*THQTEGARQDP
Trigger: TGGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGGCCCTGGAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CCA 72 bp AGAAGCTGGCCCGCTCCAGGGCCTTCCAGCTCTCTCTaGTCAGGTTGCACCCATCAAACAGAAGGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RSWPAPGPSSSL*SGCTHQTEGAR
Trigger: CCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGGCCCTGGAGCGGGCCAGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CAA 90 bp GAGAAGCTGGCCCGCTCCAGGGCCTTCCAGCTCTCTCTGGTCAGGTaGCACCCATCAAACAGAAGGTGCCAGGCAGGATCCAGGACTTGT +
Preference number: 6 (lower is better)
Translates to: EKLARSRAFQLSLVR*HPSNRRCQAGSRTC
Trigger: ACAAGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAGAGAGAGCTGGAAGGCCCTGGAGCGGGCCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CCA 72 bp CTCAGGATAAAGATGGTAAGCTCCATTGCTATAACCTaGAAGCTCCCTGCCTCGCGTCGGGTTGTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LRIKMVSSIAIT*KLPASRRVVLP
Trigger: AGGCAGGACAACCCGACGCGAGGCAGGGAGCTTCCAGGTTATAGCAATGGAGCTTACCATCTTTATCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550502.1
CDS CCA 72 bp GCTTTTTACAAGAAAGCCCGAATCTGGGCACAGTGGTaGGTGCCCATGGTCTCAGCTACTGAGGAGCTAAGA +
Preference number: 6 (lower is better)
Translates to: AFYKKARIWAQW*VPMVSATEELR
Trigger: TCTTAGCTCCTCAGTAGCTGAGACCATGGGCACCCACCACTGTGCCCAGATTCGGGCTTTCTTGTAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CAA 90 bp GTTGCACCCATCAAACAGAAGGTGCCAGGCAGGATCCAGGACTTGTaGCCAGAAGTAATTCCAAGTCGAACACTCAGCTGCCACATGCTC +
Preference number: 6 (lower is better)
Translates to: VAPIKQKVPGRIQDL*PEVIPSRTLSCHML
Trigger: GAGCATGTGGCAGCTGAGTGTTCGACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CAA 90 bp CAGGTTGCACCCATCAAACAGAAGGTGCCAGGCAGGATCCAGGACTaGTTGCCAGAAGTAATTCCAAGTCGAACACTCAGCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: QVAPIKQKVPGRIQD*LPEVIPSRTLSCHM
Trigger: CATGTGGCAGCTGAGTGTTCGACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CAA 90 bp CATGTCTCCCTAAAATGTAGAAAACCAAGCTGTACCCTGACCACCTaGGGCACATGTTCTCAGGATTTCCCGAGGGCTGTGTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: HVSLKCRKPSCTLTT*GTCSQDFPRAVSQD
Trigger: GTCCTGTGACACAGCCCTCGGGAAATCCTGAGAACATGTGCCCAAGGTGGTCAGGGTACAGCTTGGTTTTCTACATTTTAGGGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CAA 72 bp CCCATCAAACAGAAGGTGCCAGGCAGGATCCAGGACTaGTTGCCAGAAGTAATTCCAAGTCGAACACTCAGC +
Preference number: 6 (lower is better)
Translates to: PIKQKVPGRIQD*LPEVIPSRTLS
Trigger: GCTGAGTGTTCGACTTGGAATTACTTCTGGCAACAAGTCCTGGATCCTGCCTGGCACCTTCTGTTTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332160.5
ENST00000547104.1
ENST00000548553.1
ENST00000550097.1
CDS CAA 72 bp CTAAAATGTAGAAAACCAAGCTGTACCCTGACCACCTaGGGCACATGTTCTCAGGATTTCCCGAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LKCRKPSCTLTT*GTCSQDFPRAV
Trigger: CACAGCCCTCGGGAAATCCTGAGAACATGTGCCCAAGGTGGTCAGGGTACAGCTTGGTTTTCTACATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CAA 72 bp GTCTCAGCTACTGAGGAGCTAAGACAGAAGCATACCTaGAGCCCAGGAATTCAAATCCTGTCTGGGCAACAT +
Preference number: 6 (lower is better)
Translates to: VSATEELRQKHT*SPGIQILSGQH
Trigger: ATGTTGCCCAGACAGGATTTGAATTCCTGGGCTCAAGGTATGCTTCTGTCTTAGCTCCTCAGTAGCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CCA 72 bp TCATGGGCAAGAGGCCAATTTTGCCTAATAGATGTTTaGCAGCAGTCGATTCAGCTTAGTTTTCATAAGGCA +
Preference number: 6 (lower is better)
Translates to: SWARGQFCLIDV*QQSIQLSFHKA
Trigger: TGCCTTATGAAAACTAAGCTGAATCGACTGCTGCCAAACATCTATTAGGCAAAATTGGCCTCTTGCCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS CCA 72 bp GAGAAAAAGAACTGGCTGTGCTGGAAAGTCAAATCATaGGCAAGAGGCCAATTTTGCCTAATAGATGTTTGG +
Preference number: 6 (lower is better)
Translates to: EKKNWLCWKVKS*ARGQFCLIDVW
Trigger: CCAAACATCTATTAGGCAAAATTGGCCTCTTGCCCATGATTTGACTTTCCAGCACAGCCAGTTCTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548553.1
CDS GCA 72 bp AAACAATTTTTGGCTCAAGGAAGTCAGTTTGTGGGCTaGCCTTCTTTTAAAGGACAAGCCTCAGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: KQFLAQGSQFVG*PSFKGQASVFK
Trigger: TTTGAAGACTGAGGCTTGTCCTTTAAAAGAAGGGCAGCCCACAAACTGACTTCCTTGAGCCAAAAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548553.1