RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000165819

Ensembl transcript IDs: ENST00000298717.9, ENST00000367606.7, ENST00000377543.3, ENST00000396522.6, ENST00000536201.5, ENST00000537163.5, ENST00000538267.5, ENST00000539760.5, ENST00000542054.5, ENST00000543235.5, ENST00000544248.1, ENST00000544500.5, ENST00000545319.1, ENST00000545788.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGAATCACCTCCGACACTCTGTGTAAGAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGC +
Preference number: 1 (lower is better)
Translates to: TGITSDTLCKSKLLA*RVVFAARGLRIHAS
Trigger: GCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAGAGTGTCGGAGGTGATTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 90 bp TCTGCACTGGAATCACCTCCGACACTCTGTGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATG +
Preference number: 1 (lower is better)
Translates to: SALESPPTLCVRASS*LGVWSLLPGASESM
Trigger: CATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAGAGTGTCGGAGGTGATTCCAGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR TCA 90 bp CCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATATCACAACAGATCCACTGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: PRVGQPSQLQTCPRY*RPGSGYHNRSTEVG
Trigger: TCCCACCTCAGTGGATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 90 bp GGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGC +
Preference number: 1 (lower is better)
Translates to: GYLCLNRATTSGSSR*IPSSWFPRVIQLGC
Trigger: GCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR GCA 90 bp GGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTaGAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACA +
Preference number: 1 (lower is better)
Translates to: GQFHVNIPGWVSHHN*KLAQDTDVQVADIT
Trigger: TGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 90 bp ATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTC +
Preference number: 1 (lower is better)
Translates to: ICQGPIGQFHVNIPG*VSHHNCKLAQDTDV
Trigger: GACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 90 bp TGGGAAGCACATACCTCAGCTACGATCACATCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCA +
Preference number: 1 (lower is better)
Translates to: WEAHTSATITSQSRP*LKPWGFPLTPTCSP
Trigger: TGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTATGTGCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CCA 90 bp ACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCAACCAAGCAGTGTTCCTTCCCATGG +
Preference number: 1 (lower is better)
Translates to: TSATITSQSRPWLKP*GFPLTPTKQCSFPW
Trigger: CCATGGGAAGGAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR CCA 90 bp CTGGTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCAAGCAGTGT +
Preference number: 1 (lower is better)
Translates to: LVERTSATITSQSRP*LKPWGFPLTPTKQC
Trigger: ACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR GCA 90 bp CCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGTGAACATACTTGCAGGTATCCATGT +
Preference number: 1 (lower is better)
Translates to: PGLACGLCCQGPQNP*KHQFHSEHTCRYPC
Trigger: ACATGGATACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 90 bp ACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGAT +
Preference number: 1 (lower is better)
Translates to: TSATITSQSRPWLKP*GFPLTPTCSPQITD
Trigger: ATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR TCA 90 bp TTTCTCAGTAAGAAATCAAATGATTCTTCTTTGTGCTCCACCTATTaGATTGGGCCCCACTGCTGCTCACCAAGCAGTGTTCCTTCCCAT +
Preference number: 1 (lower is better)
Translates to: FLSKKSNDSSLCSTY*IGPHCCSPSSVPSH
Trigger: ATGGGAAGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTGATTTCTTACTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR GCA 90 bp TGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTT +
Preference number: 1 (lower is better)
Translates to: WVAHCVVVQITQSCE*QEIVFQSCHRFHLV
Trigger: AACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 90 bp TCCAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCAT +
Preference number: 1 (lower is better)
Translates to: SSWVAHCVVVQITQS*ECQEIVFQSCHRFH
Trigger: ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR GCA 90 bp TTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTaGTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCCA +
Preference number: 1 (lower is better)
Translates to: FYKFLGLEMIPSGYL*LNRATTSGSSRWIP
Trigger: TGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR GCA 90 bp CAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATaGCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCTAGG +
Preference number: 1 (lower is better)
Translates to: QITQSCECQEIVFQS*HRFHLVYDWWNEPR
Trigger: CCTAGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR GCA 90 bp CAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATaGCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGC +
Preference number: 1 (lower is better)
Translates to: QITQSCECQEIVFQS*HRFHLVYDWWNEPS
Trigger: GCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR GCA 90 bp CAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATaGCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCTCAG +
Preference number: 1 (lower is better)
Translates to: QITQSCECQEIVFQS*HRFHLVYDWWNEPQ
Trigger: CTGAGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR-3UTR CCA 90 bp ACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: TRSYPQRFRHSLPNSMALSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...CAGGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR CCA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR GCA 90 bp TGCTCACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 2 (lower is better)
Translates to: CSPSSVPSHGSTSDLYGLWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...CAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR TCA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACCCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 2 (lower is better)
Translates to: LVEALGISFDTNLLTTDNPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...GTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR GCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 2 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR CCA 90 bp AAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 2 (lower is better)
Translates to: KLLAWRVVFAARGLRIHATEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...TGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR TCA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACTTGTGCTCCACCTATTaGATTGGGCCCCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: LVEALGISFDTNLLTTDNLCSTY*IGPHCC
Trigger: GCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAA...GTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: FLGLEMIPSGYLCLNRATSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...GGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 90 bp GAAGCACATACCTCAGCTACGATCACATCACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAG +
Preference number: 2 (lower is better)
Translates to: EAHTSATITSQSRPW*KPWGFPLTPTCSPQ
Trigger: CTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTATGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 90 bp GTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCTTTGACACCAACCAAGCAGTGTTCC +
Preference number: 2 (lower is better)
Translates to: VERTSATITSQSRPW*KPWGFPLTPTKQCS
Trigger: GGAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR-3UTR TCA 90 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAGCTCTAGGATCTCCTaGCTGACCTTCTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VTCTACPNDALQLICLHPSSRIS*LTFLLC
Trigger: ACAGAGCAAGAAGGTCAGTCAGGAGATCCTAGAGCT...TGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR GCA 90 bp AAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 2 (lower is better)
Translates to: KPWGFPLTPTCSPQITDYACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...GTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAAACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 2 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSETEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp CAAATGATTCTTCTTTGTGCTCCACCTATTGAATTGGGCCCCACTGCTGCTCACCAGAATTCTTGCACTTaGGCCCGACCTCGAGAGCGA +
Preference number: 2 (lower is better)
Translates to: QMILLCAPPIELGPTAAHQNSCT*ARPRER
Trigger: TCGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTG...GTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR CCA 90 bp TTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LGISFDTNLLTTDNRLPYSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...ATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 2 (lower is better)
Translates to: LVEALGISFDTNLLTTDNRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...GTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 2 (lower is better)
Translates to: CEYPRVGQPSQLQTCPRYRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...GTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CAA 90 bp AACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACCAACCAAGCAGTGTTCCTTCCCATG +
Preference number: 2 (lower is better)
Translates to: NLSYDHITIQTLVEA*GISFDTNQAVFLPM
Trigger: CATGGGAAGGAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR-3UTR GCA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATCATCACTGGCTTTCATaGACTCCTCCTTGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHHHWLS*TPPWFH
Trigger: ATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATG...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR CCA 90 bp CAAATGATTCTTCTTTGTGCTCCACCTATTGAATTGGGCCCCACTGCTGCTCACGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGC +
Preference number: 2 (lower is better)
Translates to: QMILLCAPPIELGPTAAHVNIPG*VSHHNC
Trigger: GCAGTTGTGATGGCTGACCCACCCTGGGATATTCAC...GTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 90 bp TACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGA +
Preference number: 2 (lower is better)
Translates to: YLSYDHITIQTLVEA*GISFDTNLLTTDNR
Trigger: TCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR TCA 90 bp AAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCACCATGGCCCTGCCTGTaGCCCAGAGGAAGAGAAAGC +
Preference number: 2 (lower is better)
Translates to: KFLGLEMIPSGYLCLNRAPWPCL*PRGRES
Trigger: GCTTTCTCTTCCTCTGGGTCACAGGCAGGGCCATGG...TGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR TCA 90 bp GCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATATTTCATCTGGTTTATaGCTGGTGGAACGAACCAAG +
Preference number: 2 (lower is better)
Translates to: AVFLPMVQPVTCTACPNDISSGL*LVERTK
Trigger: CTTGGTTCGTTCCACCAGTCATAAACCAGATGAAAT...ATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR-3UTR GCA 90 bp TTCTTCTTTGTGCTCCACCTATTGAATTGGGCCCCACTGCTGCTCACCAAGCAGGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 2 (lower is better)
Translates to: FFFVLHLLNWAPLLLTKQVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...CTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TCTAGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 2 (lower is better)
Translates to: SSRWIPSSWFPRVIQLGCTEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...GCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp AGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACACATCTGGTTTATGACTaGTGGAACGAACCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: SRWIPSSWFPRVIQLGCTHLVYD*WNEPSS
Trigger: ACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATG...TGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR CAA 90 bp ACTGGCTTTCATGCACTCCTCCTTGGTTCCATAGTCACAGAATTCTaGCACTTGGGCCCGACCTCGAGAGCGAAATTTTTCAACAATGGA +
Preference number: 2 (lower is better)
Translates to: TGFHALLLGSIVTEF*HLGPTSRAKFFNNG
Trigger: TCCATTGTTGAAAAATTTCGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTATGGAACCAAGGAGGAGTGCATGAAAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR CAA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCACCCAAATAATTTCATCTACCCGTTC +
Preference number: 2 (lower is better)
Translates to: PMVQPVTCTACPNDA*QLICLHPNNFIYPF
Trigger: GAACGGGTAGATGAAATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR TCA 90 bp CAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCACTTGGGGATTTCCTTTaGCACCAACCAAGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: QLGCTLCGRPNNSILRVPLGDFL*HQPSSV
Trigger: AACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAG...TGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR CAA 90 bp GTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAATAATTTCATCTACCCGTTCATACCC +
Preference number: 2 (lower is better)
Translates to: VQPVTCTACPNDALQ*ICLHPNNFIYPFIP
Trigger: GGGTATGAACGGGTAGATGAAATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR TCA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAAACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 2 (lower is better)
Translates to: CVVVQITQSCECQEIVFQTCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR GCA 90 bp CAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGATTGGGCCCCACTGCTaGTCACCAAGCAGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: QEIVFQSCHRFHLVYDWWIGPHC*SPSSVP
Trigger: AGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAAT...CCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATGTCGATCAGCATCACTaGCTTTCATGCACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: CTACPNDALQLICLHPNNVDQHH*LSCTPP
Trigger: AGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGAC...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR CAA 90 bp TCAGTAAGAAATCAAATGATTCTTCTTTGTGCTCCACCTATTGAATaGGGCCCCACTGCTGCTCACCAAGCAGTGTTCCTTCCCATGGTT +
Preference number: 2 (lower is better)
Translates to: SVRNQMILLCAPPIE*GPTAAHQAVFLPMV
Trigger: AACCATGGGAAGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTGATTTCTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR TCA 90 bp TTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 2 (lower is better)
Translates to: LGISFDTNLLTTDNRLPYTCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...ATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR GCA 90 bp TGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 2 (lower is better)
Translates to: CTLCGRPNNSILRVPGDSVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CAA 90 bp ATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGATTTCCTTaGACACCAACCTGCTCACCACAGATAACAGATTACCTTATGAAA +
Preference number: 2 (lower is better)
Translates to: ITSQSRPWLKPWGFP*TPTCSPQITDYLMK
Trigger: TTTCATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 90 bp TATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTaGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCCATCC +
Preference number: 2 (lower is better)
Translates to: YKFLGLEMIPSGYLC*NRATTSGSSRWIPS
Trigger: GGATGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTATAATTCGTCTGAAGTaGAGCTTGCGACAGGGTCGA +
Preference number: 2 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAIIRLK*SLRQGR
Trigger: TCGACCCTGTCGCAAGCTGCACTTCAGACGAATTAT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCCATCTGGTTTATGACTaGTGGAACGAACCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: FLGLEMIPSGYLCLNRATHLVYD*WNEPRK
Trigger: TTTCCTAGGTTCGTTCCACCAGTCATAAACCAGATG...GGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR GCA 90 bp AAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCACCTTTGACACCAACCTaGTCACCACAGATAACAGAT +
Preference number: 2 (lower is better)
Translates to: KFLGLEMIPSGYLCLNRAPLTPT*SPQITD
Trigger: ATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGG...TGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CCA 90 bp CAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGCTGGTTTATGACTGGTaGAACGAACCAAGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: QEIVFQSCHRFHLVYDWWLVYDW*NEPSSV
Trigger: AACACTGCTTGGTTCGTTCCACCAGTCATAAACCAG...CCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR-3UTR TCA 90 bp AAGTGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCCTAGGATCTCCTGACTaGCCTTCTTGCTCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: KCFYKFLGLEMIPSGYLCLGSPD*PSCSVV
Trigger: AACAACAGAGCAAGAAGGTCAGTCAGGAGATCCTAG...GCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR CCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 2 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFTEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CCA 72 bp GAATCACCTCCGACACTCTGTGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: ESPPTLCVRASS*LGVWSLLPGAS
Trigger: TGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAGAGTGTCGGAGGTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR CAA 90 bp GGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCCAGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GYLCLNRATTSGSSRWIPEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...TGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp TCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: SHRAVPCEYPRVGQPSQLEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...CAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 72 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGACACTCTGTGTAAGAGC +
Preference number: 3 (lower is better)
Translates to: ITTDPLRWEESV*TGITSDTLCKS
Trigger: GCTCTTACACAGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 72 bp CATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTaGAAACTTGCCCAAGATACTGACGTCCAGGTAGCG +
Preference number: 3 (lower is better)
Translates to: HVNIPGWVSHHN*KLAQDTDVQVA
Trigger: CGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 72 bp GGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGCAAACTTGCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: GPIGQFHVNIPG*VSHHNCKLAQD
Trigger: ATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR CCA 72 bp TGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAG +
Preference number: 3 (lower is better)
Translates to: CLNRATTSGSSR*IPSSWFPRVIQ
Trigger: CTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp GTGACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGATAGTCACAGAATTCTaGCACTTGGGCCCGACCTCG +
Preference number: 3 (lower is better)
Translates to: VTQRKRKPSSCSTGMLSLIVTEF*HLGPTS
Trigger: CGAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTAT...CAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR CAA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 3 (lower is better)
Translates to: ITTDPLRWEESVCTGITSDLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTC...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR-3UTR CAA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATACAGAATTCTTGCACTaGGGCCCGACCTCGAGAGCG +
Preference number: 3 (lower is better)
Translates to: NCKLAQDTDVQVADITTDTEFLH*GPTSRA
Trigger: CGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTGT...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR CCA 72 bp ACGATCACATCACAATCCAGACCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCAACCTGCTCACCACAG +
Preference number: 3 (lower is better)
Translates to: TITSQSRPWLKP*GFPLTPTCSPQ
Trigger: CTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CCA 72 bp ACCACATCTGGGTCTAGTAGGTGGATCCCATCCAGTTaGTTTCCAAGGGTGATCCAGTTGGGTTGCACATTG +
Preference number: 3 (lower is better)
Translates to: TTSGSSRWIPSS*FPRVIQLGCTL
Trigger: CAATGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACTAGACCCAGATGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR CCA 72 bp CGAACCTCAGCTACGATCACATCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTTCCTTTGACACCAACC +
Preference number: 3 (lower is better)
Translates to: RTSATITSQSRP*LKPWGFPLTPT
Trigger: GGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR TCA 72 bp GGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATATCACAACAGATCCACT +
Preference number: 3 (lower is better)
Translates to: GQPSQLQTCPRY*RPGSGYHNRST
Trigger: AGTGGATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 72 bp GCTTGCGACAGGGTCGATCAGCATCACTGGCTTTCATaGACTCCTCCTTGGTTCCATAGTCACAGAATTCTT +
Preference number: 3 (lower is better)
Translates to: ACDRVDQHHWLS*TPPWFHSHRIL
Trigger: AAGAATTCTGTGACTATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR CCA 72 bp CATACCTCAGCTACGATCACATCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTTCCTTTGACACCAACC +
Preference number: 3 (lower is better)
Translates to: HTSATITSQSRP*LKPWGFPLTPT
Trigger: GGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CCA 72 bp ACGATCACATCACAATCCAGACCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCAACCAAGCAGTGTTCC +
Preference number: 3 (lower is better)
Translates to: TITSQSRPWLKP*GFPLTPTKQCS
Trigger: GGAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR-3UTR CAA 90 bp GATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGATTTCCTTTGACACCATCACAACTGCAAACTaGCCCAAGATACTGACGTCC +
Preference number: 3 (lower is better)
Translates to: DHITIQTLVEALGISFDTITTAN*PKILTS
Trigger: GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGAT...GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCGTCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCA +
Preference number: 3 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFRLKCS*RQGRSA
Trigger: TGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAACCTTGGGGATTTCCTTaGACACCAACCAAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: CVVVQITQSCECQEIVFQPWGFP*TPTKQC
Trigger: ACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGG...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
3UTR-3UTR CAA 90 bp ATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATGAAACCTTTGTGCTCCACCTATaGAATTGGGCCCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: ISFDTNLLTTDNRLPYETFVLHL*NWAPLL
Trigger: CAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAA...GGTTTCATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 3 (lower is better)
Translates to: FLGLEMIPSGYLCLNRATQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...GGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR GCA 72 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTaGTTGAACCGTGCAACCACATCTGGGTCTAGTAGG +
Preference number: 3 (lower is better)
Translates to: FLGLEMIPSGYL*LNRATTSGSSR
Trigger: CCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp ATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTTTTTCAACAATGGATaGTTCCTTGGCTGTTGTAGT +
Preference number: 3 (lower is better)
Translates to: MVQPVTCTACPNDALQLIFFNNG*FLGCCS
Trigger: ACTACAACAGCCAAGGAACAATCCATTGTTGAAAAA...AATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000537163.5
3UTR TCA 72 bp AAGAAATCAAATGATTCTTCTTTGTGCTCCACCTATTaGATTGGGCCCCACTGCTGCTCACCAAGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: KKSNDSSLCSTY*IGPHCCSPSSV
Trigger: AACACTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR GCA 72 bp GTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTCTTTCAATCATGCCAT +
Preference number: 3 (lower is better)
Translates to: VAHCVVVQITQS*ECQEIVFQSCH
Trigger: ATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 72 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAATCATGCCATAGATTT +
Preference number: 3 (lower is better)
Translates to: HCVVVQITQSCE*QEIVFQSCHRF
Trigger: AAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
3UTR-3UTR CAA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATTCATCAGTGTGTTTATaGATAATTCGTCTGAAGTGC +
Preference number: 3 (lower is better)
Translates to: CTACPNDALQLICLHPNNSSVCL*IIRLKC
Trigger: GCACTTCAGACGAATTATCAATAAACACACTGATGA...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR-3UTR CAA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 3 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHNDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
3UTR GCA 72 bp GAGCCATGGCTATGGATTCTTAGCTCTGTAAGGAAGTaGTTCTATAAATTCTTAGGTTTAGAGATGATACCA +
Preference number: 3 (lower is better)
Translates to: EPWLWILSSVRK*FYKFLGLEMIP
Trigger: TGGTATCATCTCTAAACCTAAGAATTTATAGAAGCACTTCCTTACAGAGCTAAGAATCCATAGCCATGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAAAAGTGCCCCGAGTCCTaGTTCCGCCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRASSWLGVWSLLPGASEKCPES*FRLRCS
Trigger: GCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTT...TTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp ACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGGCCACCAGAGGTGGGTaGAGTAGGCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TRSYPQRFRHSLPNSMALATRGG*SRHWAV
Trigger: GACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGC...CAGGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACAAAGTGCCCCGAGTCCTaGTTCCGCCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRWIPSSWFPRVIQLGCTKCPES*FRLRCS
Trigger: GCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTT...TGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FLPMVQPVTCTACPNDALSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...CAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CTCTGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGC +
Preference number: 4 (lower is better)
Translates to: LCVRASSWLGVWSLLPGAVNIPG*VSHHNC
Trigger: GCAGTTGTGATGGCTGACCCACCCTGGGATATTCAC...GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAACTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSELVSQP*HLSNKA
Trigger: CGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAG...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATCCATGGCCCTGCCTGTaGCCCAGAGGAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNPWPCL*PRGRES
Trigger: GCTTTCTCTTCCTCTGGGTCACAGGCAGGGCCATGG...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGCCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: PMVQPVTCTACPNDALQLPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...CAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp GGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAATTCCGTAGATCCAAGTaGCCCGAGTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GSHRAVPCEYPRVGQPSQFRRSK*PESCFR
Trigger: GCGGAAGCAGGACTCGGGGCACTTGGATCTACGGAA...TTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGATTCCGTAGATCCAAGTaGCCCGAGTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HNRSTEVGRVGLHWNHLRFRRSK*PESCFR
Trigger: GCGGAAGCAGGACTCGGGGCACTTGGATCTACGGAA...TCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: PMVQPVTCTACPNDALQLACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...CAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CTGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCCCATCTGGGTACCTTTaGTTGAACCGTGCAACCACA +
Preference number: 4 (lower is better)
Translates to: LCKSKLLAWRVVFAARGLPSGYL*LNRATT
Trigger: TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGG...GAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GAACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EPSSVPSHGSTSDLYGLSSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...GGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR TCA 90 bp TGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAACCTCAATCAACTCCTaGGCTGCAAACTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CVRASSWLGVWSLLPGASTSINS*AANFCR
Trigger: CCTGCAGAAGTTTGCAGCTCAGGAGTTGATTGAGGT...TGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp GATATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCCCATGGCCCTGCCTGTaGCCCAGAGGAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: DITTDPLRWEESVCTGITPWPCL*PRGRES
Trigger: GCTTTCTCTTCCTCTGGGTCACAGGCAGGGCCATGG...GGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: SHRAVPCEYPRVGQPSQLPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...CAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACCGCAGAGAGTCCAGCTaGTTCTTGTGGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: NRSTEVGRVGLHWNHLRHRRESS*FLWAWI
Trigger: TATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCG...GTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCAAGCAGTGTTCCTTCCCTCTGCACGCCGCTTCTaGCCTGTGACAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVEALGISFDTNQAVFLPSARRF*PVTVPA
Trigger: AGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGA...GGGAAGGAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR GCA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCCATCACTGGCTTTCATaGACTCCTCCTTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCHHWLS*TPPWFH
Trigger: ATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATG...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CTCTGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCATAATTCGTCTGAAGTaGAGCTTGCGACAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LCVRASSWLGVWSLLPGAIIRLK*SLRQGR
Trigger: TCGACCCTGTCGCAAGCTGCACTTCAGACGAATTAT...GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQGGSAITTANLPKILTSSSCFL*AWIELH
Trigger: GTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGA...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAGCTTGCGACAGGGTCGATCAGCATCACTGGCTTTCATGCACTCCTCCTTGGTAGTGGCAGGAGCATCTaGCGTGGAGATGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: QLATGSISITGFHALLLGSGRSI*RGDGKT
Trigger: TGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACT...ACCAAGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CCA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAAAGTGGCAGGAGCATCTaGCGTGGAGATGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSESGRSI*RGDGKT
Trigger: TGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACT...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACTCTGTGTAAGAGCAAGCAGTGGCAGGAGCATCTaGCGTGGAGATGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: GKSRSALESPPTLCVRASSGRSI*RGDGKT
Trigger: TGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACT...GCTTGCTCTTACACAGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATCTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNLPHLE*QEHLAW
Trigger: CCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAG...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AVFLPMVQPVTCTACPNDSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...ATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCCTGGTTTATGACTGGTaGAACGAACCTCAGCTACGA +
Preference number: 4 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCLVYDW*NEPQLR
Trigger: TCGTAGCTGAGGTTCGTTCCACCAGTCATAAACCAG...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CCA 90 bp GGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCCATCCATGGCCCTGAGGTaGGAAGAGTCGGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: GYLCLNRATTSGSSRWIPSMALR*EESVCT
Trigger: AGTGCAGACCGACTCTTCCCACCTCAGGGCCATGGA...TGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR CAA 72 bp TGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTaGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: CVRASSWLGVWS*LPGASESMQAS
Trigger: TGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCACTAGGATCTCCTGACTaGCCTTCTTGCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SWLGVWSLLPGASESMQALGSPD*PSCSVV
Trigger: AACAACAGAGCAAGAAGGTCAGTCAGGAGATCCTAG...TGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR TCA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATCCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TTTGTGCTCCACCTATTGAATTGGGCCCCACTGCTGCTCACCAAGCAGTGTTCCTTGTGCTCCACCTATTaGATTGGGCCCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVLHLLNWAPLLLTKQCSLCSTY*IGPHCC
Trigger: GCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAA...GGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAAATCAACTCCTGAGCTaGAAACTTCTGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CVRASSWLGVWSLLPGASNQLLS*KLLQEA
Trigger: AGCCTCCTGCAGAAGTTTGCAGCTCAGGAGTTGATT...TGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATCTGCACGCCGCTTCTaGCCTGTGACAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISSARRF*PVTVPA
Trigger: AGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGA...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QRKRKPSSCSTGMLSLRIGCSRH*AVTTEG
Trigger: ACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCC...GATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCCAGGAGCATCTGGCGTaGAGATGGCAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: ITTDPLRWEESVCTGITSQEHLA*RWQDRW
Trigger: CCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTG...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGACAGGAGCATCTGGCGTaGAGATGGCAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: RTSATITSQSRPWLKPWGQEHLA*RWQDRW
Trigger: CCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTG...TCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CCA 90 bp GGAACGAACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCCCACAGCACCCATCATaGCAGAGAGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: GTNQAVFLPMVQPVTCTAPQHPS*QRAWNG
Trigger: ACCATTCCAAGCTCTCTGCCATGATGGGTGCTGTGG...GGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTTCGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR CCA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCCAGAATTCTTGCACTTaGGCCCGACCTCGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: ITTDPLRWEESVCTGITSQNSCT*ARPRER
Trigger: TCGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTG...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CCA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 4 (lower is better)
Translates to: PMVQPVTCTACPNDALQLRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...CAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACGAAGCTTTGGAGGCCTaGGAAGCACATACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTDPLRWEESVCTGITSDEALEA*EAHTSA
Trigger: AGCTGAGGTATGTGCTTCCCAGGCCTCCAAAGCTTC...GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAACTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: FHVNIPGWVSHHNCKLAQLVSQP*HLSNKA
Trigger: CGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAG...TTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp ACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACGGCAGCATGTTTCCTTaGTTTCTTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TTDPLRWEESVCTGITSDGSMFP*FLGWLL
Trigger: AAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCC...GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCGGCAGCATGTTTCCTTaGTTTCTTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQGGSAITTANLPKILTSGSMFP*FLGWLL
Trigger: AAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCC...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CAGCTTGCGACAGGGTCGATCAGCATCACTGGCTTTCATGCACTCCTCCTTGGTGTAGTACGGGTATGTTaGGCCTGCGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QLATGSISITGFHALLLGVVRVC*ACASHH
Trigger: ATGATGAGATGCGCAGGCTCAACATACCCGTACTAC...ACCAAGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR TCA 90 bp ACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGGTAGTACGGGTATGTTaGGCCTGCGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TRSYPQRFRHSLPNSMALVVRVC*ACASHH
Trigger: ATGATGAGATGCGCAGGCTCAACATACCCGTACTAC...CAGGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGTACGGCCTGTCCGAATaGTGCGTTGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: NQAVFLPMVQPVTCTACPYGLSE*CVAVDL
Trigger: CAAATCAACTGCAACGCATCATTCGGACAGGCCGTA...CGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539760.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCACCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp GTGACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGTTGTGCTCCACCTATTaGATTGGGCCCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTQRKRKPSSCSTGMLSLLCSTY*IGPHCC
Trigger: GCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAA...CAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCCACCAGAGGTGGGTaGAGTAGGCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AARGLRIHASINFIVNILATRGG*SRHWAV
Trigger: GACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGC...AAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAGGGCCCTTCTTTTCTaGCACAGCACCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: VTCTACPNDALQLICLHPRALLF*HSTHHG
Trigger: GCCATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCT...TGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp GTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCTAGGGCCCTTCTTTTCTaGCACAGCACCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: VERTSATITSQSRPWLKPRALLF*HSTHHG
Trigger: GCCATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCT...AGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR GCA 90 bp CTGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGT +
Preference number: 4 (lower is better)
Translates to: LCKSKLLAWRVVFAARGLGPQNP*KHQFHS
Trigger: ACTATGAAATTGATGCTTGCATGGATTCTGAGGCCC...GAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: FHVNIPGWVSHHNCKLAQACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...TTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCGTGATCCAGTTGGGTTaGACATTGTGTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SQGGSAITTANLPKILTSVIQLG*TLCGRP
Trigger: TGGACGACCACACAATGTGCAACCCAACTGGATCAC...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GATATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCATTGGGCCCCACTGCTaGTCACCAAGCAGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DITTDPLRWEESVCTGITIGPHC*SPSSVP
Trigger: AGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAAT...GGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LACGLCCQGPQNPCKHQFSSCFL*AWIELH
Trigger: GTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGA...AAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCAGATGGCAAGACAGATaGACACAGCATCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPRWQDR*TQHQWA
Trigger: TGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCT...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ACTGGTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAACTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TGGTNLSYDHITIQTLVELPHLE*QEHLAW
Trigger: CCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAG...TTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CCA 90 bp GCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVFLPMVQPVTCTACPNDVRASS*LGVWSL
Trigger: CAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC...ATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAAAAATGTGGAAGCTTTaGAGGCCTGGGAAGCACATA +
Preference number: 4 (lower is better)
Translates to: CVRASSWLGVWSLLPGASKMWKL*RPGKHI
Trigger: TATGTGCTTCCCAGGCCTCCAAAGCTTCCACATTTT...TGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAACAGAATTCTTGCACTTaGGCCCGACCTTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSEQNSCT*ARPSCS
Trigger: AGAGCAAGAAGGTCGGGCCCAAGTGCAAGAATTCTG...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543235.5
CDS-3UTR TCA 90 bp CATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTACCTCAATCAACTCCTaGGCTGCAAACTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HHLSGSHRAVPCEYPRVGTSINS*AANFCR
Trigger: CCTGCAGAAGTTTGCAGCTCAGGAGTTGATTGAGGT...ACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CACCAACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGCTTGGGGATTTCCTTTaGCACCAACCAAGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HQPSSVPSHGSTSDLYGLLGDFL*HQPSSV
Trigger: AACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAG...CAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR TCA 90 bp GATACTGACGTCCAGGTAGCGGATATCACAACAGATCCACTGAGGTGGGAAGAGCTGGGTACCTTTGCTTaGACCGTGCAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: DTDVQVADITTDPLRWEELGTFA*TVQPHL
Trigger: CAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAG...CTCTTCCCACCTCAGTGGATCTGTTGTGATATCCGCTACCTGGACGTCAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCTGCTCAATCAACTCCTaGGCTGCAAACTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TQRKRKPSSCSTGMLSLRCSINS*AANFCR
Trigger: CCTGCAGAAGTTTGCAGCTCAGGAGTTGATTGAGCA...GCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR GCA 90 bp GATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGATTTCCTTTGACACCCGCAGAGAGTCCAGCTaGTTCTTGTGGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: DHITIQTLVEALGISFDTRRESS*FLWAWI
Trigger: TATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCG...GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAAAGTCGAGTCCTGTTCTaGACGCCGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSESRVLF*TPLLPC
Trigger: ACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACT...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATCATCTAGTCGAGTCCTGTTCTaGACGCCGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RKPSSCSTGMLSLRISSSSRVLF*TPLLPC
Trigger: ACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACT...AGATGATGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCACAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: SWLGVWSLLPGASESMQAQITQS*ECQEIV
Trigger: GACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG...TGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TTCTTCTTTGTGCTCCACCTATTGAATTGGGCCCCACTGCTGCTCACCAAGCAGCTTGGCTGGCTCCTTTaGTGGTTCCGATGCTCAATC +
Preference number: 4 (lower is better)
Translates to: FFFVLHLLNWAPLLLTKQLGWLL*WFRCSI
Trigger: GATTGAGCATCGGAACCAGCAAAGGAGCCAGCCAAG...CTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CCA 90 bp ATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: MVQPVTCTACPNDALQLISSCFL*AWIELH
Trigger: GTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGA...AATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QLGCTLCGRPNNSILRVPGCSRH*AVTTEG
Trigger: ACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCC...TGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GAACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EPSSVPSHGSTSDLYGLSARSER*CSNFFS
Trigger: AGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGC...GGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR CCA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SQGGSAITTANLPKILTSARSER*CSNFFS
Trigger: AGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGC...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAAGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSHRAVPCEYPRVGQPSQARSER*CSNFFS
Trigger: AGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGC...TTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCAGATGGCAAGACAGATaGACACAGCATCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ITTDPLRWEESVCTGITSRWQDR*TQHQWA
Trigger: TGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCT...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATCATCTGGCGTGGAGATaGCAAGACAGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHHLAWR*QDRWTQ
Trigger: CTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATG...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGGTCGATCAGCATCACTaGCTTTCATGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLPMVQPVTCTACPNDALVDQHH*LSCTPP
Trigger: AGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGAC...CAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CTACPNDALQLICLHPNNSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GATATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: DITTDPLRWEESVCTGITVRASS*LGVWSL
Trigger: CAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC...GGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VTCTACPNDALQLICLHPVRASS*LGVWSL
Trigger: CAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC...TGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATACAGATCCACTGAGGTaGGAAGAGTCGGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADTDPLR*EESVCT
Trigger: AGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGT...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGC +
Preference number: 4 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVVNIPG*VSHHNC
Trigger: GCAGTTGTGATGGCTGACCCACCCTGGGATATTCAC...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSESQSRP*LKPWGF
Trigger: AAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGA...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: VFLPMVQPVTCTACPNDASQSRP*LKPWGF
Trigger: AAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGA...CGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAATGCTGGTTCCGATGCTaGAGAGTTCAGACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FHVNIPGWVSHHNCKLAQCWFRC*RVQTRD
Trigger: GTCTCTGGTCTGAACTCTTCAGCATCGGAACCAGCA...TTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGCTCTAGGATCTCCTaGCTGACCTTCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHSSRIS*LTFLLC
Trigger: ACAGAGCAAGAAGGTCAGTCAGGAGATCCTAGAGCT...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR TCA 90 bp CTGGTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGAATCCAGACCCTGGTTaGAGCCTTGGGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LVERTSATITSQSRPWLKNPDPG*SLGDFL
Trigger: AAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATT...CTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR GCA 90 bp CCAAGGGTGATCCAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCCGCAGAGAGTCCAGCTaGTTCTTGTGGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: PRVIQLGCTLCGRPNNSIRRESS*FLWAWI
Trigger: TATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCG...GATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGATCACCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GAGCAGTCACCTAAAGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAAGTGCCCCGAGTCCTaGTTCCGCCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQSPKDSSVCLLIIRLKCKCPES*FRLRCS
Trigger: GCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTT...GCACTTCAGACGAATTATCAATAAACACACTGATGAGTCTTTAGGTGACTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGAATCAACTCCTGAGCTaGAAACTTCTGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHRAVPCEYPRVGQPSQLNQLLS*KLLQEA
Trigger: AGCCTCCTGCAGAAGTTTGCAGCTCAGGAGTTGATT...CAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CATGCCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGCAGTGTTCTCTGCACGCCGCTTCTaGCCTGTGACAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HAIDFIWFMTGGTNQAVFSARRF*PVTVPA
Trigger: AGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGA...GAACACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR GCA 90 bp TCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCGTGATCCAGTTGGGTTaGACATTGTGTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGYLCLNRATTSGSSRWIVIQLG*TLCGRP
Trigger: TGGACGACCACACAATGTGCAACCCAACTGGATCAC...GATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAATTGGGCCCCACTGCTaGTCACCAAGCAGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HHNCKLAQDTDVQVADITIGPHC*SPSSVP
Trigger: AGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAAT...TGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FRDDTIWVPLLEPCNHIWGCSRH*AVTTEG
Trigger: ACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCC...CCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACAAGATGGCAAGACAGATaGACACAGCATCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRWIPSSWFPRVIQLGCTRWQDR*TQHQWA
Trigger: TGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCT...TGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACAGGAGCATCTGGCGTaGAGATGGCAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSEQEHLA*RWQDRW
Trigger: CCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTG...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACTCTGTGTAAGAGCAAGCTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: GKSRSALESPPTLCVRASSLVDC*FRRLSI
Trigger: GATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGA...GCTTGCTCTTACACAGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CCAAGGGTGATCCAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCCAGAATTCTTGCACTTaGGCCCGACCTCGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PRVIQLGCTLCGRPNNSIQNSCT*ARPRER
Trigger: TCGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTG...GATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGATCACCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGTCGATCAGCATCACTaGCTTTCATGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVVDQHH*LSCTPP
Trigger: AGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGAC...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CTLCGRPNNSILRVPGDSSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISVRASS*LGVWSL
Trigger: CAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATCCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCA +
Preference number: 4 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHPWLKP*GFPLTP
Trigger: TGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGG...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TGCTCACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: CSPSSVPSHGSTSDLYGLTEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...CAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGCTGGTTTATGACTGGTaGAACGAACCAAGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VFLPMVQPVTCTACPNDALVYDW*NEPSSV
Trigger: AACACTGCTTGGTTCGTTCCACCAGTCATAAACCAG...CGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
3UTR CAA 72 bp ACCTCAGCTACGATCACATCACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCTTTGACACCAACCTGC +
Preference number: 4 (lower is better)
Translates to: TSATITSQSRPW*KPWGFPLTPTC
Trigger: GCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp AGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTCTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: RGLRIHASINFIVNILAGLVSQP*HLSNKA
Trigger: CGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAG...ACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISTCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACTACGGCCTGTCCGAATaGTGCGTTGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: LVEALGISFDTNLLTTDNYGLSE*CVAVDL
Trigger: CAAATCAACTGCAACGCATCATTCGGACAGGCCGTA...GTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATACGGCCTGTCCGAATaGTGCGTTGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISYGLSE*CVAVDL
Trigger: CAAATCAACTGCAACGCATCATTCGGACAGGCCGTA...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTTTCCGTAGATCCAAGTaGCCCGAGTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HCVVVQITQSCECQEIVFFRRSK*PESCFR
Trigger: GCGGAAGCAGGACTCGGGGCACTTGGATCTACGGAA...AAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGTCTGCACGCCGCTTCTaGCCTGTGACAGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALSARRF*PVTVPA
Trigger: AGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGA...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAAAGTCGAGTCCTGTTCTaGACGCCGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CVVVQITQSCECQEIVFQSRVLF*TPLLPC
Trigger: ACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACT...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGTCGATCAGCATCAGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: CLLIIRLKCSLRQGRSASACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...TGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SQGGSAITTANLPKILTSTQSCE*QEIVFQ
Trigger: TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPQITQS*ECQEIV
Trigger: GACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATCCTTTGACACCAACCTaGTCACCACAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNPLTPT*SPQITD
Trigger: ATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGG...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACATGGACACAGCATCAGTaGGCAATGTTAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SRWIPSSWFPRVIQLGCTWTQHQ*AMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCA...TGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATCTGGCGTGGAGATaGCAAGACAGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSEHLAWR*QDRWTQ
Trigger: CTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATG...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAACTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CVVVQITQSCECQEIVFQLPHLE*QEHLAW
Trigger: CCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAG...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATTCATGGCAGAGAGCTTaGAATGGTCAGCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNSWQRA*NGQHRL
Trigger: TAACCTATGCTGACCATTCCAAGCTCTCTGCCATGA...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACACCACAGCACCCATCATaGCAGAGAGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: HHNCKLAQDTDVQVADITPQHPS*QRAWNG
Trigger: ACCATTCCAAGCTCTCTGCCATGATGGGTGCTGTGG...TGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: AVFLPMVQPVTCTACPNDSLVDC*FRRLSI
Trigger: GATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGA...ATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGTCATGCACTCCTCCTTaGTTCCATAGTCACAGAATT +
Preference number: 4 (lower is better)
Translates to: PMVQPVTCTACPNDALQLSCTPP*FHSHRI
Trigger: AATTCTGTGACTATGGAACCAAGGAGGAGTGCATGA...CAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAAGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGC +
Preference number: 4 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSEVNIPG*VSHHNC
Trigger: GCAGTTGTGATGGCTGACCCACCCTGGGATATTCAC...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGGCCATAGATTTCATCTaGTTTATGACTGGTGGAACG +
Preference number: 4 (lower is better)
Translates to: TRSYPQRFRHSLPNSMALAIDFI*FMTGGT
Trigger: CGTTCCACCAGTCATAAACCAGATGAAATCTATGGC...CAGGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACGCCATAGATTTCATCTaGTTTATGACTGGTGGAACG +
Preference number: 4 (lower is better)
Translates to: NRSTEVGRVGLHWNHLRHAIDFI*FMTGGT
Trigger: CGTTCCACCAGTCATAAACCAGATGAAATCTATGGC...GTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp TTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGAGAGATGATACCATCTaGGTACCTTTGCTTGAACCG +
Preference number: 4 (lower is better)
Translates to: FLPMVQPVTCTACPNDALRDDTI*VPLLEP
Trigger: CGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCT...CAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR CAA 72 bp TACGATCACATCACAATCCAGACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACCAACCTGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: YDHITIQTLVEA*GISFDTNLLTT
Trigger: TGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 72 bp ACCTCAGCTACGATCACATCACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCTTTGACACCAACCAAG +
Preference number: 4 (lower is better)
Translates to: TSATITSQSRPW*KPWGFPLTPTK
Trigger: CTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR TCA 90 bp CCAAGGGTGATCCAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: PRVIQLGCTLCGRPNNSITCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...GATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGATCACCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp CCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATGATGCGTTGCAGTTaGTTTGTCTTCACCCAAATA +
Preference number: 4 (lower is better)
Translates to: PMVQPVTCTACPNDALQLMMRCS*FVFTQI
Trigger: TATTTGGGTGAAGACAAATCAACTGCAACGCATCAT...CAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGAATGATGCGTTGCAGTTaGTTTGTCTTCACCCAAATA +
Preference number: 4 (lower is better)
Translates to: HNRSTEVGRVGLHWNHLRMMRCS*FVFTQI
Trigger: TATTTGGGTGAAGACAAATCAACTGCAACGCATCAT...TCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp CATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAAATCCAGACCCTGGTTaGAGCCTTGGGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: HHNCKLAQDTDVQVADITNPDPG*SLGDFL
Trigger: AAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATT...TGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATCTGGGTACCTTTGCTTaGACCGTGCAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: NCKLAQDTDVQVADITTDLGTFA*TVQPHL
Trigger: CAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAG...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCTGGAGAAAAATCTGGGATaGGAATACACCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: TRSYPQRFRHSLPNSMALEKNLG*EYTQHE
Trigger: TTCATGTTGGGTGTATTCTCATCCCAGATTTTTCTC...CAGGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGAAGTGCCCCGAGTCCTaGTTCCGCCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMKCPES*FRLRCS
Trigger: GCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTT...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000537163.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGCCACCAGAGGTGGGTaGAGTAGGCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGATRGG*SRHWAV
Trigger: GACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAAATCAACTCCTGAGCTaGAAACTTCTGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISNQLLS*KLLQEA
Trigger: AGCCTCCTGCAGAAGTTTGCAGCTCAGGAGTTGATT...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: NQAVFLPMVQPVTCTACPHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...CGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539760.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCTGGACACAGCATCAGTaGGCAATGTTAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SHHNCKLAQDTDVQVADIWTQHQ*AMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCA...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CATGCCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGCAGTGTTCCAGGAGCATCTGGCGTaGAGATGGCAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: HAIDFIWFMTGGTNQAVFQEHLA*RWQDRW
Trigger: CCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTG...GAACACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR CCA 90 bp CTGGTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGTCATGGCAGAGAGCTTaGAATGGTCAGCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: LVERTSATITSQSRPWLKSWQRA*NGQHRL
Trigger: TAACCTATGCTGACCATTCCAAGCTCTCTGCCATGA...CTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CCA 90 bp AGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATCATCTCCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCA +
Preference number: 4 (lower is better)
Translates to: RKPSSCSTGMLSLRISSSPWLKP*GFPLTP
Trigger: TGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGG...AGATGATGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCTCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: SHHNCKLAQDTDVQVADISQSRP*LKPWGF
Trigger: AAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGA...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCTCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SHHNCKLAQDTDVQVADISGSSR*IPSSWF
Trigger: AAACCAACTGGATGGGATCCACCTACTAGACCCAGA...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGAAGCTTTGGAGGCCTaGGAAGCACATACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRDDTIWVPLLEPCNHIWEALEA*EAHTSA
Trigger: AGCTGAGGTATGTGCTTCCCAGGCCTCCAAAGCTTC...CCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 72 bp TACGATCACATCACAATCCAGACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACCAACCAAGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: YDHITIQTLVEA*GISFDTNQAVF
Trigger: GAACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR TCA 90 bp GCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTAATCCAGACCCTGGTTaGAGCCTTGGGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: AARGLRIHASINFIVNILNPDPG*SLGDFL
Trigger: AAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATT...AAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACACTGGGTACCTTTGCTTaGACCGTGCAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: LGLEMIPSGYLCLNRATTLGTFA*TVQPHL
Trigger: CAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAG...TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAATTTCATCTGGTTTATaGCTGGTGGAACGAACCAAG +
Preference number: 4 (lower is better)
Translates to: VTCTACPNDALQLICLHPISSGL*LVERTK
Trigger: CTTGGTTCGTTCCACCAGTCATAAACCAGATGAAAT...TGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR GCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGCGCAGAGAGTCCAGCTaGTTCTTGTGGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALRRESS*FLWAWI
Trigger: TATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCG...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATTGCTTCCGCCTCCGCTaGAGCCTCTCCCGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHCFRLR*SLSRRE
Trigger: CTCTCTGCGGGAGAGGCTGCAGCGGAGGCGGAAGCA...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000537163.5
CDS-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTTTCCGTAGATCCAAGTaGCCCGAGTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAFRRSK*PESCFR
Trigger: GCGGAAGCAGGACTCGGGGCACTTGGATCTACGGAA...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGGCCACCAGAGGTGGGTaGAGTAGGCACTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: CFYKFLGLEMIPSGYLCLATRGG*SRHWAV
Trigger: GACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGC...CAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTAGTCGAGTCCTGTTCTaGACGCCGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLASRVLF*TPLLPC
Trigger: ACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CCTGTGACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGT +
Preference number: 4 (lower is better)
Translates to: PVTQRKRKPSSCSTGMLSGPQNP*KHQFHS
Trigger: ACTATGAAATTGATGCTTGCATGGATTCTGAGGCCC...GCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGTCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGT +
Preference number: 4 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVGPQNP*KHQFHS
Trigger: ACTATGAAATTGATGCTTGCATGGATTCTGAGGCCC...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 4 (lower is better)
Translates to: SHHNCKLAQDTDVQVADIVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHQITQS*ECQEIV
Trigger: GACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATCCATCTGGGTACCTTTaGTTGAACCGTGCAACCACA +
Preference number: 4 (lower is better)
Translates to: NCKLAQDTDVQVADITTDPSGYL*LNRATT
Trigger: TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGG...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGTGGACACAGCATCAGTaGGCAATGTTAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SWVAHCVVVQITQSCECQWTQHQ*AMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCA...CTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATGAAACCACACCATCTGGCGTGGAGATaGCAAGACAGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: PLTPTCSPQITDYLMKPHHLAWR*QDRWTQ
Trigger: CTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATG...GTGTGGTTTCATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGAGTGGCAGGAGCATCTaGCGTGGAGATGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALSGRSI*RGDGKT
Trigger: TGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACT...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGTCATGCACTCCTCCTTaGTTCCATAGTCACAGAATT +
Preference number: 4 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVSCTPP*FHSHRI
Trigger: AATTCTGTGACTATGGAACCAAGGAGGAGTGCATGA...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 4 (lower is better)
Translates to: HCVVVQITQSCECQEIVFRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...AAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCACATCTGGTTTATGACTaGTGGAACGAACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISHLVYD*WNEPQL
Trigger: TAGCTGAGGTTCGTTCCACCAGTCATAAACCAGATG...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CCA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAAAAATGTGGAAGCTTTaGAGGCCTGGGAAGCACATA +
Preference number: 4 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISKMWKL*RPGKHI
Trigger: TATGTGCTTCCCAGGCCTCCAAAGCTTCCACATTTT...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CCTGTGACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCATCTGGTTTATGACTaGTGGAACGAACCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: PVTQRKRKPSSCSTGMLSHLVYD*WNEPRK
Trigger: TTTCCTAGGTTCGTTCCACCAGTCATAAACCAGATG...GCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGTCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACAGGCTGGCTCCTTTGCTaGTTCCGATGCTCAATCAAC +
Preference number: 4 (lower is better)
Translates to: LGLEMIPSGYLCLNRATTGWLLC*FRCSIN
Trigger: GTTGATTGAGCATCGGAACCAGCAAAGGAGCCAGCC...TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR TCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGLVSQP*HLSNKA
Trigger: CGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp CATGCCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGCAGTGTTCAGCTCTAGGATCTCCTaGCTGACCTTCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HAIDFIWFMTGGTNQAVFSSRIS*LTFLLC
Trigger: ACAGAGCAAGAAGGTCAGTCAGGAGATCCTAGAGCT...GAACACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR TCA 90 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: HCVVVQITQSCECQEIVFTCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...AAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGTCGATCAGCATCAGTAGTACGGGTATGTTaGGCCTGCGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CLLIIRLKCSLRQGRSASVVRVC*ACASHH
Trigger: ATGATGAGATGCGCAGGCTCAACATACCCGTACTAC...TGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGCCATGGCCCTGCCTGTaGCCCAGAGGAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMPWPCL*PRGRES
Trigger: GCTTTCTCTTCCTCTGGGTCACAGGCAGGGCCATGG...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000537163.5
CDS-3UTR TCA 90 bp AAGTGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCCCATGGCCCTGCCTGTaGCCCAGAGGAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KCFYKFLGLEMIPSGYLCPWPCL*PRGRES
Trigger: GCTTTCTCTTCCTCTGGGTCACAGGCAGGGCCATGG...GCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATACGGCCTGTCCGAATaGTGCGTTGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: LGLEMIPSGYLCLNRATTYGLSE*CVAVDL
Trigger: CAAATCAACTGCAACGCATCATTCGGACAGGCCGTA...TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCCATGGTTCAACCAGTaGCCTGTACGGCCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGPWFNQ*PVRPVR
Trigger: TCGGACAGGCCGTACAGGTCACTGGTTGAACCATGG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GAGCAGTCACCTAAAGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAGGGCCCTTCTTTTCTaGCACAGCACCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: EQSPKDSSVCLLIIRLKCRALLF*HSTHHG
Trigger: GCCATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCT...GCACTTCAGACGAATTATCAATAAACACACTGATGAGTCTTTAGGTGACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543235.5
CDS-3UTR GCA 90 bp TCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGYLCLNRATTSGSSRWIHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...GATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGCGTGTGGTCTTTGCTaGCAGGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGACGLC*QGPQNP
Trigger: TGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: CQEIVFQSCHRFHLVYDWWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...CCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLASSCFL*AWIELH
Trigger: GTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGA...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGGCSRH*AVTTEG
Trigger: ACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AARGLRIHASINFIVNILARSER*CSNFFS
Trigger: AGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGC...AAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTAGATGGCAAGACAGATaGACACAGCATCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGLRIHASINFIVNILAGRWQDR*TQHQWA
Trigger: TGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCT...ACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGCATCTGGCGTGGAGATaGCAAGACAGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALHLAWR*QDRWTQ
Trigger: CTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATG...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATAGTGGCAGGAGCATCTaGCGTGGAGATGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHSGRSI*RGDGKT
Trigger: TGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACT...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATTCCTGGCTTGGCGTGTaGTCTTTGCTGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHSWLGV*SLLPGA
Trigger: GGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTAGCAAGCTCCTGGCTTaGCGTGTGGTCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSSKLLA*RVVFAA
Trigger: GGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCT...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATTGGATCCCATCCAGTTaGTTTCCAAGGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: CTACPNDALQLICLHPNNWIPSS*FPRVIQ
Trigger: CTGGATCACCCTTGGAAACCAACTGGATGGGATCCA...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTTGGATCCCATCCAGTTaGTTTCCAAGGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: HCVVVQITQSCECQEIVFWIPSS*FPRVIQ
Trigger: CTGGATCACCCTTGGAAACCAACTGGATGGGATCCA...AAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATTCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NCKLAQDTDVQVADITTDSGSSR*IPSSWF
Trigger: AAACCAACTGGATGGGATCCACCTACTAGACCCAGA...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAAAGAGATGATACCATCTaGGTACCTTTGCTTGAACCG +
Preference number: 4 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSERDDTI*VPLLEP
Trigger: CGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCT...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 72 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAATAATTTCATCTACCCG +
Preference number: 4 (lower is better)
Translates to: VTCTACPNDALQ*ICLHPNNFIYP
Trigger: CGGGTAGATGAAATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
3UTR CAA 72 bp AGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SWFPRVIQLGCT*CGRPNNSILRV
Trigger: CACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGATCACCCTTGGAAACCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR CAA 72 bp TTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTaGAACCGTGCAACCACATCTGGGTCTAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGLEMIPSGYLC*NRATTSGSSRW
Trigger: CCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGACCTCAATCAACTCCTaGGCTGCAAACTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALTSINS*AANFCR
Trigger: CCTGCAGAAGTTTGCAGCTCAGGAGTTGATTGAGGT...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGGGCAGCATGTTTCCTTaGTTTCTTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALGSMFP*FLGWLL
Trigger: AAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCC...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAACTAGGATCTCCTGACTaGCCTTCTTGCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CVVVQITQSCECQEIVFQLGSPD*PSCSVV
Trigger: AACAACAGAGCAAGAAGGTCAGTCAGGAGATCCTAG...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000539760.5
CDS-3UTR TCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGGTAGTACGGGTATGTTaGGCCTGCGCATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALVVRVC*ACASHH
Trigger: ATGATGAGATGCGCAGGCTCAACATACCCGTACTAC...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACACATCACTGGCTTTCATaGACTCCTCCTTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LGLEMIPSGYLCLNRATTHHWLS*TPPWFH
Trigger: ATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATG...TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp GCCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGCAGTGTTCCTTATAATTCGTCTGAAGTaGAGCTTGCGACAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: AIDFIWFMTGGTNQAVFLIIRLK*SLRQGR
Trigger: TCGACCCTGTCGCAAGCTGCACTTCAGACGAATTAT...AAGGAACACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR GCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTATCCATTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LRIHASINFIVNILAGIHWEESV*TGITSD
Trigger: GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCA...ATGGATACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTGTCACTACGGAAGGTTaGAGACAATGCTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAVTTEG*RQCCLW
Trigger: CCAGAGGCAGCATTGTCTCCAACCTTCCGTAGTGAC...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCACATCTGGCGTGGAGATaGCAAGACAGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: KFLGLEMIPSGYLCLNRAHLAWR*QDRWTQ
Trigger: CTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATG...TGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCAGGAGCATCTGGCGTaGAGATGGCAAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGQEHLA*RWQDRW
Trigger: CCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGCTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMLPHLE*QEHLAW
Trigger: CCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAG...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp CCTAAAGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACCACAGCACCCATCATaGCAGAGAGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PKDSSVCLLIIRLKCSLRPQHPS*QRAWNG
Trigger: ACCATTCCAAGCTCTCTGCCATGATGGGTGCTGTGG...TCGCAAGCTGCACTTCAGACGAATTATCAATAAACACACTGATGAGTCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543235.5
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTGTAAGAGCAAGCTCCTaGCTTGGCGTGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAVRASS*LGVWSL
Trigger: CAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLARVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTACAGATCCACTGAGGTaGGAAGAGTCGGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLATDPLR*EESVCT
Trigger: AGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGAACAGATCCACTGAGGTaGGAAGAGTCGGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QITQSCECQEIVFQSCHRTDPLR*EESVCT
Trigger: AGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGT...TCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp CATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTTCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HCVVVQITQSCECQEIVFSGSSR*IPSSWF
Trigger: AAACCAACTGGATGGGATCCACCTACTAGACCCAGA...AAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
3UTR CAA 72 bp AATCAAATGATTCTTCTTTGTGCTCCACCTATTGAATaGGGCCCCACTGCTGCTCACCAAGCAGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: NQMILLCAPPIE*GPTAAHQAVFL
Trigger: AAGGAACACTGCTTGGTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAAGAAGAATCATTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
3UTR CAA 72 bp GGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCA +
Preference number: 4 (lower is better)
Translates to: GCTLCGRPNNSI*RVPGDSLSIMP
Trigger: TGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTGCTGGTTCCGATGCTaGAGAGTTCAGACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSCWFRC*RVQTRD
Trigger: GTCTCTGGTCTGAACTCTTCAGCATCGGAACCAGCA...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp CTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTATCCATTGCTGGTTCCGATGCTaGAGAGTTCAGACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRIHASINFIVNILAGIHCWFRC*RVQTRD
Trigger: GTCTCTGGTCTGAACTCTTCAGCATCGGAACCAGCA...ATGGATACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGCTAGGATCTCCTGACTaGCCTTCTTGCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALLGSPD*PSCSVV
Trigger: AACAACAGAGCAAGAAGGTCAGTCAGGAGATCCTAG...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR TCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGCTTGGGGATTTCCTTTaGCACCAACCAAGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALLGDFL*HQPSSV
Trigger: AACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAG...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298717.9
CDS-3UTR TCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCTGGGTACCTTTGCTTaGACCGTGCAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGLGTFA*TVQPHL
Trigger: CAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SWVAHCVVVQITQSCECQHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...CTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR GCA 90 bp CCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATGAAACCACACGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 4 (lower is better)
Translates to: PLTPTCSPQITDYLMKPHVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...GTGTGGTTTCATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTGTGATCCAGTTGGGTTaGACATTGTGTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAVIQLG*TLCGRP
Trigger: TGGACGACCACACAATGTGCAACCCAACTGGATCAC...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATGTGATCCAGTTGGGTTaGACATTGTGTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHVIQLG*TLCGRP
Trigger: TGGACGACCACACAATGTGCAACCCAACTGGATCAC...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGCCATCTGGGTACCTTTaGTTGAACCGTGCAACCACA +
Preference number: 4 (lower is better)
Translates to: QEIVFQSCHRFHLVYDWWPSGYL*LNRATT
Trigger: TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGG...CCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGCCTTTGACACCAACCTaGTCACCACAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: RLISVFIDNSSEVQLATGPLTPT*SPQITD
Trigger: ATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGG...CCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACACACTGATGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGTGGACACAGCATCAGTaGGCAATGTTAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALWTQHQ*AMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCA...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATCTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHLPHLE*QEHLAW
Trigger: CCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAG...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCCACAGCACCCATCATaGCAGAGAGCTTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFPQHPS*QRAWNG
Trigger: ACCATTCCAAGCTCTCTGCCATGATGGGTGCTGTGG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGTCGATCAGCATCATCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: CLLIIRLKCSLRQGRSASSLVDC*FRRLSI
Trigger: GATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGA...TGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGCAGAATTCTTGCACTTaGGCCCGACCTCGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMQNSCT*ARPRER
Trigger: TCGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTG...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCAGAGTCGGTCTGCACTaGAATCACCTCCGACACTCT +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGRVGLH*NHLRHS
Trigger: AGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGTGAATATCCCAGGGTaGGTCAGCCATCACAACTGC +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSVNIPG*VSHHNC
Trigger: GCAGTTGTGATGGCTGACCCACCCTGGGATATTCAC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGCCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCA +
Preference number: 4 (lower is better)
Translates to: CQEIVFQSCHRFHLVYDWPWLKP*GFPLTP
Trigger: TGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGG...CCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATCTTTCTACCCCATCTTaGGTGGCAGGAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHLSTPS*VAGASG
Trigger: GCCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAG...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR TCA 90 bp TGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGTGCTGGTTCCGATGCTaGAGAGTTCAGACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CFYKFLGLEMIPSGYLCLCWFRC*RVQTRD
Trigger: GTCTCTGGTCTGAACTCTTCAGCATCGGAACCAGCA...CAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCACTTGCCCAAGATACTaGCGTCCAGGTAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFTCPRY*RPGSGY
Trigger: ATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGT...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCAATCCAGACCCTGGTTaGAGCCTTGGGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFNPDPG*SLGDFL
Trigger: AAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATT...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGAGAAAAATCTGGGATaGGAATACACCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: FRDDTIWVPLLEPCNHIWEKNLG*EYTQHE
Trigger: TTCATGTTGGGTGTATTCTCATCCCAGATTTTTCTC...CCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATAGGGCCCTTCTTTTCTaGCACAGCACCCATCATGGC +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHRALLF*HSTHHG
Trigger: GCCATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000539760.5
CDS-3UTR GCA 90 bp TGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGCATCACTGGCTTTCATaGACTCCTCCTTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: CQEIVFQSCHRFHLVYDWHHWLS*TPPWFH
Trigger: ATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATG...CCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGAATAATTCGTCTGAAGTaGAGCTTGCGACAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: QITQSCECQEIVFQSCHRIIRLK*SLRQGR
Trigger: TCGACCCTGTCGCAAGCTGCACTTCAGACGAATTAT...TCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLGLEMIPSGYLCLNRATTQSCE*QEIVFQ
Trigger: TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT...GGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCCATCTGGGTACCTTTaGTTGAACCGTGCAACCACA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGPSGYL*LNRATT
Trigger: TGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGACACAGCATCAGTaGGCAATGTTAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CQEIVFQSCHRFHLVYDWWTQHQ*AMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCA...CCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CCA 90 bp GATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGATTTCCTTTGACACCGAAATTTTTCAACAATaGATTGTTCCTTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DHITIQTLVEALGISFDTEIFQQ*IVPWLL
Trigger: CAACAGCCAAGGAACAATCCATTGTTGAAAAATTTC...GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CCA 90 bp TGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGTCGATCAGCATCATCATGCACTCCTCCTTaGTTCCATAGTCACAGAATT +
Preference number: 4 (lower is better)
Translates to: CLLIIRLKCSLRQGRSASSCTPP*FHSHRI
Trigger: AATTCTGTGACTATGGAACCAAGGAGGAGTGCATGA...TGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGTCGATCAGCATCACTaGCTTTCATGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSVDQHH*LSCTPP
Trigger: AGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGAC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTATCCATGTCGATCAGCATCACTaGCTTTCATGCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRIHASINFIVNILAGIHVDQHH*LSCTPP
Trigger: AGGAGGAGTGCATGAAAGCCAGTGATGCTGATCGAC...ATGGATACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCCCTGGTTGAAGCCTTaGGGATTTCCTTTGACACCA +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSPWLKP*GFPLTP
Trigger: TGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGG...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALTEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATATGATGCGTTGCAGTTaGTTTGTCTTCACCCAAATA +
Preference number: 4 (lower is better)
Translates to: CTACPNDALQLICLHPNNMMRCS*FVFTQI
Trigger: TATTTGGGTGAAGACAAATCAACTGCAACGCATCAT...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR TCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGTACGGCCTGTCCGAATaGTGCGTTGCAGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMYGLSE*CVAVDL
Trigger: CAAATCAACTGCAACGCATCATTCGGACAGGCCGTA...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCAATCAACTCCTGAGCTaGAAACTTCTGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGNQLLS*KLLQEA
Trigger: AGCCTCCTGCAGAAGTTTGCAGCTCAGGAGTTGATT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCATAATTCGTCTGAAGTaGAGCTTGCGACAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFIIRLK*SLRQGR
Trigger: TCGACCCTGTCGCAAGCTGCACTTCAGACGAATTAT...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp TTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LGISFDTNLLTTDNRLPYTQSCE*QEIVFQ
Trigger: TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT...ATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGAGATGGCAAGACAGATaGACACAGCATCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMRWQDR*TQHQWA
Trigger: TGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCT...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTTCATGGCAGAGAGCTTaGAATGGTCAGCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLASWQRA*NGQHRL
Trigger: TAACCTATGCTGACCATTCCAAGCTCTCTGCCATGA...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACACAGATCCACTGAGGTaGGAAGAGTCGGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: FYKFLGLEMIPSGYLCLNTDPLR*EESVCT
Trigger: AGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGT...GTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCACAATCCAGACCCTaGTTGAAGCCTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFSQSRP*LKPWGF
Trigger: AAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGA...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCTGGTTTATGACTGGTaGAACGAACCTCAGCTACGA +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSLVYDW*NEPQLR
Trigger: TCGTAGCTGAGGTTCGTTCCACCAGTCATAAACCAG...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298717.9
CDS-3UTR CCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGTGGATCCCATCCAGTTaGTTTCCAAGGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMWIPSS*FPRVIQ
Trigger: CTGGATCACCCTTGGAAACCAACTGGATGGGATCCA...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCTGGGTCTAGTAGGTaGATCCCATCCAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFSGSSR*IPSSWF
Trigger: AAACCAACTGGATGGGATCCACCTACTAGACCCAGA...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCATCTGGTTTATGACTaGTGGAACGAACCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAHLVYD*WNEPSS
Trigger: ACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATG...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR TCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATACCTCAATCAACTCCTaGGCTGCAAACTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHTSINS*AANFCR
Trigger: CCTGCAGAAGTTTGCAGCTCAGGAGTTGATTGAGGT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000539760.5
CDS-3UTR TCA 90 bp TTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACGGCAGCATGTTTCCTTaGTTTCTTGGCTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FYKFLGLEMIPSGYLCLNGSMFP*FLGWLL
Trigger: AAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCC...GTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATAGCTCTAGGATCTCCTaGCTGACCTTCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHSSRIS*LTFLLC
Trigger: ACAGAGCAAGAAGGTCAGTCAGGAGATCCTAGAGCT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR TCA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATATTTCATCTGGTTTATaGCTGGTGGAACGAACCTCA +
Preference number: 4 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHISSGL*LVERTS
Trigger: TGAGGTTCGTTCCACCAGTCATAAACCAGATGAAAT...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGT +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAGPQNP*KHQFHS
Trigger: ACTATGAAATTGATGCTTGCATGGATTCTGAGGCCC...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAQITQS*ECQEIV
Trigger: GACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTCATGGCAGAGAGCTTaGAATGGTCAGCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSSWQRA*NGQHRL
Trigger: TAACCTATGCTGACCATTCCAAGCTCTCTGCCATGA...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSSLVDC*FRRLSI
Trigger: GATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGA...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCATCTGGTTTATGACTaGTGGAACGAACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGHLVYD*WNEPQL
Trigger: TAGCTGAGGTTCGTTCCACCAGTCATAAACCAGATG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298717.9
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTAGAGATGATACCATCTaGGTACCTTTGCTTGAACCG +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSRDDTI*VPLLEP
Trigger: CGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCT...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TTCACCCAAATAATTTCATCTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCATCTGGTTTATGACTaGTGGAACGAACCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: FTQIISSTRSYPQRFRHSHLVYD*WNEPRK
Trigger: TTTCCTAGGTTCGTTCCACCAGTCATAAACCAGATG...AGAATGTCTAAACCTCTGGGGGTATGAACGGGTAGATGAAATTATTTGGGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR TCA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTATGATGCGTTGCAGTTaGTTTGTCTTCACCCAAATA +
Preference number: 4 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAMMRCS*FVFTQI
Trigger: TATTTGGGTGAAGACAAATCAACTGCAACGCATCAT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR TCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTATTTCATCTGGTTTATaGCTGGTGGAACGAACCTCA +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSISSGL*LVERTS
Trigger: TGAGGTTCGTTCCACCAGTCATAAACCAGATGAAAT...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298717.9
CDS-3UTR GCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATAATCAACTCCTGAGCTaGAAACTTCTGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHNQLLS*KLLQEA
Trigger: AGCCTCCTGCAGAAGTTTGCAGCTCAGGAGTTGATT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR GCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATCATCACTGGCTTTCATaGACTCCTCCTTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHHHWLS*TPPWFH
Trigger: ATGGAACCAAGGAGGAGTGCATGAAAGCCAGTGATG...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR GCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGGGCCTCAGAATCCATaGAAGCATCAATTTCATAGT +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSGPQNP*KHQFHS
Trigger: ACTATGAAATTGATGCTTGCATGGATTCTGAGGCCC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000537163.5
CDS-3UTR GCA 90 bp AAGTGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCGTCAGCCATCACAACTaGAAACTTGCCCAAGATACT +
Preference number: 4 (lower is better)
Translates to: KCFYKFLGLEMIPSGYLCVSHHN*KLAQDT
Trigger: AGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC...GCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGTQSCE*QEIVFQ
Trigger: TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCACTCAATCTTGCGAGTaGCAGGAGATAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFTQSCE*QEIVFQ
Trigger: TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCCAAATAACTCAATCTTaGGAGTGCCAGGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGQITQS*ECQEIV
Trigger: GACTATCTCCTGGCACTCGCAAGATTGAGTTATTTG...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHARSER*CSNFFS
Trigger: AGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGC...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTCATGCACTCCTCCTTaGTTCCATAGTCACAGAATT +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSSCTPP*FHSHRI
Trigger: AATTCTGTGACTATGGAACCAAGGAGGAGTGCATGA...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCGCCATAGATTTCATCTaGTTTATGACTGGTGGAACG +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFAIDFI*FMTGGT
Trigger: CGTTCCACCAGTCATAAACCAGATGAAATCTATGGC...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGACAGAGCCATGGCTATaGATTCTTAGCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMTEPWL*ILSSVR
Trigger: CCTTACAGAGCTAAGAATCCATAGCCATGGCTCTGT...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
3UTR CAA 72 bp CCTCGAGAGCGAAATTTTTCAACAATGGATTGTTCCTaGGCTGTTGTAGTATTTAATAGCTCTAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PRERNFSTMDCS*AVVVFNSSRIS
Trigger: GGAGATCCTAGAGCTATTAAATACTACAACAGCCAAGGAACAATCCATTGTTGAAAAATTTCGCTCTCGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR TCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCATGATGCGTTGCAGTTaGTTTGTCTTCACCCAAATA +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGMMRCS*FVFTQI
Trigger: TATTTGGGTGAAGACAAATCAACTGCAACGCATCAT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR GCA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCATAGTGAACATACTTaGAGGTATCCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFHSEHT*RYPCGN
Trigger: GTTTCCACATGGATACCTGCAAGTATGTTCACTATG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp TATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCCATAGATTTCATCTaGTTTATGACTGGTGGAACG +
Preference number: 4 (lower is better)
Translates to: YKFLGLEMIPSGYLCLNRAIDFI*FMTGGT
Trigger: CGTTCCACCAGTCATAAACCAGATGAAATCTATGGC...ACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATAGAGATGATACCATCTaGGTACCTTTGCTTGAACCG +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHRDDTI*VPLLEP
Trigger: CGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGCCATAGATTTCATCTaGTTTATGACTGGTGGAACG +
Preference number: 4 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHAIDFI*FMTGGT
Trigger: CGTTCCACCAGTCATAAACCAGATGAAATCTATGGC...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGAAATTTTTCAACAATaGATTGTTCCTTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGEIFQQ*IVPWLL
Trigger: CAACAGCCAAGGAACAATCCATTGTTGAAAAATTTC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CCA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGAAATTTTTCAACAATaGATTGTTCCTTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSEIFQQ*IVPWLL
Trigger: CAACAGCCAAGGAACAATCCATTGTTGAAAAATTTC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS GCA 90 bp GGATTCCGTAGATCCAAGTGCCCCGAGTCCTGCTTCCGCCTCCGCTaGAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTTGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GFRRSKCPESCFRLR*SLSRRESSCFLWAW
Trigger: CCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTTGGATCTACGGAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298717.9
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS GCA 90 bp ACTGAATTCCAGCCCAAGTGCCCCGAGTCCTGCTTCCGCCTCCGCTaGAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTTGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TEFQPKCPESCFRLR*SLSRRESSCFLWAW
Trigger: CCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTTGGGCTGGAATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367606.7
CDS GCA 90 bp AGCTGTGTTCACGCCACTGAATTCCAGCCCAAGTGCCCCGAGTCCTaGTTCCGCCTCCGCTGCAGCCTCTCCCGCAGAGAGTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCVHATEFQPKCPES*FRLRCSLSRRESSC
Trigger: GCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTTGGGCTGGAATTCAGTGGCGTGAACACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367606.7
CDS CCA 90 bp CGACGTCCTCGCAGTCTGAAGAGGAGTGGGCAAGGCGGACGAGGGTaGGGCTCAAGCGTCCGTCCGGTAAAAGTGAGCCAAGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: RRPRSLKRSGQGGRG*GSSVRPVKVSQVPR
Trigger: TCGGGGCACTTGGCTCACTTTTACCGGACGGACGCTTGAGCCCCACCCTCGTCCGCCTTGCCCACTCCTCTTCAGACTGCGAGGACGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545319.1
CDS CCA 90 bp CGCCTCCGCTGCAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCACGTGTCCGACATCCTAGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RLRCSLSRRESSCFL*AWIELHVSDILVSQ
Trigger: CTGGGAGACTAGGATGTCGGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS TCA 90 bp GCCTGGATAGAGCTCCACGTGTCCGACATCCTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCGCGGCGGACTAGCACCTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AWIELHVSDILVSQP*HLSNKARRTSTSQH
Trigger: GTGCTGGGAGGTGCTAGTCCGCCGCGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAGGATGTCGGACACGTGGAGCTCTATCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS GCA 90 bp GAGACTGCAGTAAGCTGTGTTCACGCCACTGAATTCCAGCCCAAGTaGCCCGAGTCCTGCTTCCGCCTCCGCTGCAGCCTCTCCCGCAGA +
Preference number: 5 (lower is better)
Translates to: ETAVSCVHATEFQPK*PESCFRLRCSLSRR
Trigger: TCTGCGGGAGAGGCTGCAGCGGAGGCGGAAGCAGGACTCGGGGCACTTGGGCTGGAATTCAGTGGCGTGAACACAGCTTACTGCAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367606.7
CDS GCA 90 bp GCTGGAAGAACCGAGGCCCAGCGTGAGGAGGAACCGCGAACTACTTaGAGAAGGGCGAACGTCTGCTGCCAAGTGCCCCGAGTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGRTEAQREEEPRTT*RRANVCCQVPRVLL
Trigger: AAGCAGGACTCGGGGCACTTGGCAGCAGACGTTCGCCCTTCTGCAAGTAGTTCGCGGTTCCTCCTCACGCTGGGCCTCGGTTCTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS CCA 90 bp CGACGTCCTCGCAGTCTGAAGAGGAGTGGGCAAGGCGGACGAGGGTaGGGCTCAAGCGTCCGTCCGGTAAAAGTGAGCTGGAAGAACCGA +
Preference number: 5 (lower is better)
Translates to: RRPRSLKRSGQGGRG*GSSVRPVKVSWKNR
Trigger: TCGGTTCTTCCAGCTCACTTTTACCGGACGGACGCTTGAGCCCCACCCTCGTCCGCCTTGCCCACTCCTCTTCAGACTGCGAGGACGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS-3UTR CAA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS TCA 90 bp AGCGTCCGTCCGGTAAAAGTGAGCTGGAAGAACCGAGGCCCAGCGTaGGGAGGAACCGCGAACTACTTGCAGAAGGGCGAACGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SVRPVKVSWKNRGPA*GGTANYLQKGERLL
Trigger: CAGCAGACGTTCGCCCTTCTGCAAGTAGTTCGCGGTTCCTCCTCACGCTGGGCCTCGGTTCTTCCAGCTCACTTTTACCGGACGGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS GCA 90 bp AGTCGAGTCCTGTTCTGCACGCCGCTTCTGCCCTGTGACAGTCCCTaGTACCTCCCCAGGGCCCTTCTTTTCTGCCACAGCACCCATCAT +
Preference number: 5 (lower is better)
Translates to: SRVLFCTPLLPCDSP*YLPRALLFCHSTHH
Trigger: ATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCTGGGGAGGTAGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS-3UTR CAA 90 bp TCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCAGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SWLGVWSLLPGASESMQAEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...TGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS CCA 90 bp AGCTGTGCTGGGCTTAGGGCCACCAGAGGTGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGTTGGAGACAATGCTGCCTCTGGATT +
Preference number: 5 (lower is better)
Translates to: SCAGLRATRGGCSRH*AVTTEGWRQCCLWI
Trigger: AATCCAGAGGCAGCATTGTCTCCAACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGCCCTAAGCCCAGCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCTTGGCTGGCTCCTTaGCTGGTTCCGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SWLGVWSLLPGASESMQASWLAP*LVPMLK
Trigger: CTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGA...TGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCCCAAGGGTGATCCAGTaGGGTTGCACATTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCPRVIQ*GCTLCG
Trigger: ACCACACAATGTGCAACCCAACTGGATCACCCTTGG...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CTGTGTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGGCAGCATGTTTCCTaGATTTCTTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LCKSKLLAWRVVFAARGLRQHVS*ISWLAP
Trigger: AGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCT...GAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCCGTCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SQGGSAITTANLPKILTSRLKCS*RQGRSA
Trigger: TGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACG...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GTAAGAGCAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCT +
Preference number: 5 (lower is better)
Translates to: VRASSWLGVWSLLPGASEQSRPW*KPWGFP
Trigger: AGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTG...TTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: ITTDPLRWEESVCTGITSESSCF*WAWIEL
Trigger: GAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTC...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGACAGAATTCTTGCACTaGGGCCCGACCTCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: FLPMVQPVTCTACPNDALTEFLH*GPTSRA
Trigger: CGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTGT...CAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp AGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCACAGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRWIPSSWFPRVIQLGCTEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...TGTGCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCATCACAACTGCAAACTaGCCCAAGATACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: QAPGLACGLCCQGPQNPCITTAN*PKILTS
Trigger: GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGAT...GCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCACCTTGGGGATTTCCTTaGACACCAACCAAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: KLLAWRVVFAARGLRIHAPWGFP*TPTKQC
Trigger: ACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGG...TGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CAA 90 bp CAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGCTCCACCTATTGAATaGGGCCCCACTGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: QAVFLPMVQPVTCTACPNAPPIE*GPTAAH
Trigger: GTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGC...ATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AACCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGATAGTCACAGAATTCTaGCACTTGGGCCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: NQAVFLPMVQPVTCTACPIVTEF*HLGPTS
Trigger: CGAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTAT...CGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR CAA 90 bp TCTAGTAGGTGGATCCCATCCAGTTGGTTTCCAAGGGTGATCCAGTTGGGTTGCCGTCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SSRWIPSSWFPRVIQLGCRLKCS*RQGRSA
Trigger: TGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACG...GCAACCCAACTGGATCACCCTTGGAAACCAACTGGATGGGATCCACCTACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACC +
Preference number: 5 (lower is better)
Translates to: VFLPMVQPVTCTACPNDATLVEA*GISFDT
Trigger: GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGT...CGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACC +
Preference number: 5 (lower is better)
Translates to: TTDPLRWEESVCTGITSDTLVEA*GISFDT
Trigger: GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGT...GTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCCAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCT +
Preference number: 5 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPQSRPW*KPWGFP
Trigger: AGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTG...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CCAAGCAGTGTTCCTTCCCATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAAACCATCTGGGTACCTTaGCTTGAACCGTGCAACCAC +
Preference number: 5 (lower is better)
Translates to: PSSVPSHGSTSDLYGLSETIWVP*LEPCNH
Trigger: GTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGT...TTCGGACAGGCCGTACAGGTCACTGGTTGAACCATGGGAAGGAACACTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CTACCCGTTCATACCCCCAGAGGTTTAGACATTCTCTCCCCAACTCCATGGCCCCCTTGGGGATTTCCTTaGACACCAACCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: LPVHTPRGLDILSPTPWPPWGFP*TPTCSP
Trigger: TGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGG...GGGCCATGGAGTTGGGGAGAGAATGTCTAAACCTCTGGGGGTATGAACGGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS GCA 90 bp TCTGACAAACCCATCCCACCTCATTCCCTTCCAAGAGACCTGAAGTaGAGCTTGCGACAGGGTCGATCAGCATCACTGGCTTTCATGCAC +
Preference number: 5 (lower is better)
Translates to: SDKPIPPHSLPRDLK*SLRQGRSASLAFMH
Trigger: GTGCATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGGTCTCTTGGAAGGGAATGAGGTGGGATGGGTTTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536201.5
CDS-3UTR CAA 90 bp GCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: ACGLCCQGPQNPCKHQFHAFYPI*SGRSIW
Trigger: CCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGC...ATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: MIPSGYLCLNRATTSGSSEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...ACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCTGTAGTACGGGTATGTaGAGCCTGCGCATCTCATCA +
Preference number: 5 (lower is better)
Translates to: SQGGSAITTANLPKILTSCSTGM*SLRISS
Trigger: TGATGAGATGCGCAGGCTCAACATACCCGTACTACA...GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AAGCTCCTGGCTTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCACCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: KLLAWRVVFAARGLRIHAPNNSI*RVPGDS
Trigger: ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGG...TGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAAGCCAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATGGTGATCCAGTTGGGTaGCACATTGTGTGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADGDPVG*HIVWSS
Trigger: GGACGACCACACAATGTGCAACCCAACTGGATCACC...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCCCAGTGGATCCCATCCAGTaGGTTTCCAAGGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: GYLCLNRATTSGSSRWIPVDPIQ*VSKGDP
Trigger: TGGATCACCCTTGGAAACCAACTGGATGGGATCCAC...TGGGATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS GCA 90 bp CCCTGGGAGTTGGGCAGTAGGGAATCATCCCCAGTTGAGAACCACTaGTGTAAACAGTTCCTTGCCCTAGGGGTAAATCCCTGTCAAACA +
Preference number: 5 (lower is better)
Translates to: PWELGSRESSPVENH*CKQFLALGVNPCQT
Trigger: TGTTTGACAGGGATTTACCCCTAGGGCAAGGAACTGTTTACAGCAGTGGTTCTCAACTGGGGATGATTCCCTACTGCCCAACTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CCA 90 bp GAGCATCTGGCGTGGAGATGGCAAGACAGATGGACACAGCATCAGTaGGCAATGTTAAGGCCAGATCAGAGAGGTGGTGTAGCAACTTCT +
Preference number: 5 (lower is better)
Translates to: EHLAWRWQDRWTQHQ*AMLRPDQRGGVATS
Trigger: AGAAGTTGCTACACCACCTCTCTGATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATGCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATCCAAGGGTGATCCAGTaGGGTTGCACATTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADPRVIQ*GCTLCG
Trigger: ACCACACAATGTGCAACCCAACTGGATCACCCTTGG...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGGCGTGTGGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTGTGGATCCCATCCAGTaGGTTTCCAAGGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: LACGLCCQGPQNPCKHQFVDPIQ*VSKGDP
Trigger: TGGATCACCCTTGGAAACCAACTGGATGGGATCCAC...AAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACCACACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TCTCATCATCTGTCAGGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGCCTTGGGGATTTCCTTaGACACCAACCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: SHHLSGSHRAVPCEYPRVPWGFP*TPTCSP
Trigger: TGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGG...CACCCTGGGATATTCACATGGAACTGCCCTATGGGACCCTGACAGATGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCTTGGCTGGCTCCTTaGCTGGTTCCGATGCTCAAT +
Preference number: 5 (lower is better)
Translates to: QRKRKPSSCSTGMLSLRISWLAP*LVPMLN
Trigger: ATTGAGCATCGGAACCAGCAAAGGAGCCAGCCAAGA...GATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS GCA 90 bp CACTTTGGGACAGACAACTGTTTGTTGTGGGGGTTTGTCCCACTATaGACTGTAGGATGTTTGACAACATCCCTGGCCTCTACCCCCACT +
Preference number: 5 (lower is better)
Translates to: HFGTDNCLLWGFVPL*TVGCLTTSLASTPT
Trigger: AGTGGGGGTAGAGGCCAGGGATGTTGTCAAACATCCTACAGTGCATAGTGGGACAAACCCCCACAACAAACAGTTGTCTGTCCCAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CCA 90 bp CACTTGGGCCCGACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCTGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HLGPTFLLCCSLVDC*FRRLSISRSTSEAA
Trigger: TGCTGCCTCAGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTCGGGCCCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542054.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: MIPSGYLCLNRATTSGSSAFYPI*SGRSIW
Trigger: CCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGC...ACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GTGACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGAGGCAGCATGTTTCCTaGATTTCTTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VTQRKRKPSSCSTGMLSLRQHVS*ISWLAP
Trigger: AGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCT...CAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGCGTCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCA +
Preference number: 5 (lower is better)
Translates to: FRDDTIWVPLLEPCNHIWRLKCS*RQGRSA
Trigger: TGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACG...CCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATCACAACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCATCACAACTGCAAACTaGCCCAAGATACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: ITTDPLRWEESVCTGITSITTAN*PKILTS
Trigger: GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGAT...GGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AACAGATCCACTGAGGTGGGAAGAGTCGGTCTGCACTGGAATCACCTCCGACACCCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: NRSTEVGRVGLHWNHLRHPNNSI*RVPGDS
Trigger: ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGG...GTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGTGGATCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ACCCAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 5 (lower is better)
Translates to: TQRKRKPSSCSTGMLSLRQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...GCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATTCTGGGTACCTTTGCTaGAACCGTGCAACCACATCT +
Preference number: 5 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADSGYLC*NRATTS
Trigger: AGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACCATCTGGGTACCTTaGCTTGAACCGTGCAACCAC +
Preference number: 5 (lower is better)
Translates to: SHHNCKLAQDTDVQVADITIWVP*LEPCNH
Trigger: GTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGT...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATGCTCCACCTATTGAATaGGGCCCCACTGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: NCKLAQDTDVQVADITTDAPPIE*GPTAAH
Trigger: GTGAGCAGCAGTGGGGCCCAATTCAATAGGTGGAGC...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CTGGTTGAAGCCTTGGGGATTTCCTTTGACACCAACCTGCTCACCACAGATAACTTTGTGCTCCACCTATaGAATTGGGCCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LVEALGISFDTNLLTTDNFVLHL*NWAPLL
Trigger: CAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAA...GTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAATCCCCAAGGCTTCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GTCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATAGTCACAGAATTCTaGCACTTGGGCCCGACCTTC +
Preference number: 5 (lower is better)
Translates to: VSHHNCKLAQDTDVQVADIVTEF*HLGPTF
Trigger: GAAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTAT...ATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543235.5
CDS CCA 90 bp CCAACTCCATGGCCCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCTGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PTPWPFLLCCSLVDC*FRRLSISRSTSEAA
Trigger: TGCTGCCTCAGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGGCCATGGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396522.6
CDS CCA 90 bp AGGTCATTACCGTGGAGATGGCAAGACAGATGGACACAGCATCAGTaGGCAATGTTAAGGCCAGATCAGAGAGGTGGTGTAGCAACTTCT +
Preference number: 5 (lower is better)
Translates to: RSLPWRWQDRWTQHQ*AMLRPDQRGGVATS
Trigger: AGAAGTTGCTACACCACCTCTCTGATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCTCCACGGTAATGACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544500.5
CDS-3UTR CAA 90 bp TGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAAGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: CVVVQITQSCECQEIVFQESSCF*WAWIEL
Trigger: GAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTC...TTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: CTLCGRPNNSILRVPGDSAFYPI*SGRSIW
Trigger: CCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGC...ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATACAGAATTCTTGCACTaGGGCCCGACCTCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: CTACPNDALQLICLHPNNTEFLH*GPTSRA
Trigger: CGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTGT...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp ATGGTTCAACCAGTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTAGTACGGGTATGTaGAGCCTGCGCATCTCATCA +
Preference number: 5 (lower is better)
Translates to: MVQPVTCTACPNDALQLICSTGM*SLRISS
Trigger: TGATGAGATGCGCAGGCTCAACATACCCGTACTACA...AATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCACTGGTTGAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CAGAGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 5 (lower is better)
Translates to: QRKRKPSSCSTGMLSLRIQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...GATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTGGTGATCCAGTTGGGTaGCACATTGTGTGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CTLCGRPNNSILRVPGDSGDPVG*HIVWSS
Trigger: GGACGACCACACAATGTGCAACCCAACTGGATCACC...ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCACAACAGATGGTGATCCAGTTGGGTaGCACATTGTGTGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: NCKLAQDTDVQVADITTDGDPVG*HIVWSS
Trigger: GGACGACCACACAATGTGCAACCCAACTGGATCACC...ATCTGTTGTGATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAACTGCAAACTTGCCCAATCTGGGTACCTTTGCTaGAACCGTGCAACCACATCT +
Preference number: 5 (lower is better)
Translates to: FHVNIPGWVSHHNCKLAQSGYLC*NRATTS
Trigger: AGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA...TTGGGCAAGTTTGCAGTTGTGATGGCTGACCCACCCTGGGATATTCACATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGACCATCTGGGTACCTTaGCTTGAACCGTGCAACCAC +
Preference number: 5 (lower is better)
Translates to: SWVAHCVVVQITQSCECQTIWVP*LEPCNH
Trigger: GTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGT...CTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS TCA 90 bp ACCCCAATGACTGGAAGGAATATGCTGAAAAGGAATGGCTGCTTCTaGCAAACCCATCCCACCTCATTCCCTTCCAAGAGACCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: TPMTGRNMLKRNGCF*QTHPTSFPSKRPEV
Trigger: CACTTCAGGTCTCTTGGAAGGGAATGAGGTGGGATGGGTTTGTCAGAAGCAGCCATTCCTTTTCAGCATATTCCTTCCAGTCATTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536201.5
CDS CCA 90 bp CACATGACCCCTACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCTGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HMTPTFLLCCSLVDC*FRRLSISRSTSEAA
Trigger: TGCTGCCTCAGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTAGGGGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CCA 90 bp AATCCTAACTCTGTCAGGTCATTACCGTGGAGATGGCAAGACAGATaGACACAGCATCAGTGGGCAATGTTAAGGCCAGATCAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: NPNSVRSLPWRWQDR*TQHQWAMLRPDQRG
Trigger: ACCTCTCTGATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCTCCACGGTAATGACCTGACAGAGTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544500.5
CDS-3UTR CAA 90 bp AGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RLISVFIDNSSEVQLATGAFYPI*SGRSIW
Trigger: CCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGC...CCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACACACTGATGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TCTTGCACTTGGGCCCGACCTCGAGAGCGAAATTTTTCAACAATGGATTGTTCCAGGCAGCATGTTTCCTaGATTTCTTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SCTWARPRERNFSTMDCSRQHVS*ISWLAP
Trigger: AGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCT...GGAACAATCCATTGTTGAAAAATTTCGCTCTCGAGGTCGGGCCCAAGTGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CAA 90 bp GTGACCTGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCATTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: VTCTACPNDALQLICLHPFLSGL*VQKALY
Trigger: ATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAA...TGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AGGAAGAGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCAGACCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: RKRKPSSCSTGMLSLRISDLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTC...TGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGACAGAATTCTTGCACTaGGGCCCGACCTCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALTEFLH*GPTSRA
Trigger: CGCTCTCGAGGTCGGGCCCAAGTGCAAGAATTCTGT...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp GGGTCCCATAGGGCAGTTCCATGTGAATATCCCAGGGTGGGTCAGCCATCACAAAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 5 (lower is better)
Translates to: GSHRAVPCEYPRVGQPSQNDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...TTGTGATGGCTGACCCACCCTGGGATATTCACATGGAACTGCCCTATGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GATACTGACGTCCAGGTAGCGGATATCACAACAGATCCACTGAGGTGGGAAGAGTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: DTDVQVADITTDPLRWEECPNDA*QLICLH
Trigger: GTGAAGACAAATCAACTGCAACGCATCATTCGGACA...CTCTTCCCACCTCAGTGGATCTGTTGTGATATCCGCTACCTGGACGTCAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CTGGTGGAACGAACCTCAGCTACGATCACATCACAATCCAGACCCTGGTTGAAGCCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: LVERTSATITSQSRPWLKPNNSI*RVPGDS
Trigger: ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGG...CTTCAACCAGGGTCTGGATTGTGATGTGATCGTAGCTGAGGTTCGTTCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS-3UTR CAA 90 bp CAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCATCTGGGTACCTTTGCTaGAACCGTGCAACCACATCT +
Preference number: 5 (lower is better)
Translates to: QLGCTLCGRPNNSILRVPSGYLC*NRATTS
Trigger: AGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA...TGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: CQEIVFQSCHRFHLVYDWESSCF*WAWIEL
Trigger: GAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTC...CCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGTCTTGGCTGGCTCCTTaGCTGGTTCCGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALSWLAP*LVPMLK
Trigger: CTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGA...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGAGCAAGCTCCTGGCTaGGCGTGTGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGEQAPG*ACGLCC
Trigger: GCAGCAAAGACCACACGCCAAGCCAGGAGCTTGCTC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAAATCACAACTGCAAACTaGCCCAAGATACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSEITTAN*PKILTS
Trigger: GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGAT...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GGTCTTTGCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 5 (lower is better)
Translates to: GLCCQGPQNPCKHQFHSEQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...TTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGCAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AGACTCATCAGTGTGTTTATTGATAATTCGTCTGAAGTGCAGCTTGCGACAGGGGTGGATCCCATCCAGTaGGTTTCCAAGGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: RLISVFIDNSSEVQLATGVDPIQ*VSKGDP
Trigger: TGGATCACCCTTGGAAACCAACTGGATGGGATCCAC...CCCTGTCGCAAGCTGCACTTCAGACGAATTATCAATAAACACACTGATGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGESSCF*WAWIEL
Trigger: GAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTC...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CCAAGGGTGATCCAGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: PRVIQLGCTLCGRPNNSIFLSGL*VQKALY
Trigger: ATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAA...GATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACTGGATCACCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGTTGGGTTGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SWVAHCVVVQITQSCECQCPNDA*QLICLH
Trigger: GTGAAGACAAATCAACTGCAACGCATCATTCGGACA...CTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp AGAAAGCCATCATCCTGTAGTACGGGTATGTTGAGCCTGCGCATCTCATCATCTTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RKPSSCSTGMLSLRISSSCPNDA*QLICLH
Trigger: GTGAAGACAAATCAACTGCAACGCATCATTCGGACA...AGATGATGAGATGCGCAGGCTCAACATACCCGTACTACAGGATGATGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTCGTCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: AARGLRIHASINFIVNILRLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGACG...AAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS CCA 90 bp ATGGACACAGCATCAGTGGGCAATGTTAAGGCCAGATCAGAGAGGTaGTGTAGCAACTTCTTCTCTAACTCAGGATCTGTAGCTAATTCA +
Preference number: 5 (lower is better)
Translates to: MDTASVGNVKARSER*CSNFFSNSGSVANS
Trigger: TGAATTAGCTACAGATCCTGAGTTAGAGAAGAAGTTGCTACACCACCTCTCTGATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTTGTCACTACGGAAGGTaGGAGACAATGCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLACHYGR*ETMLPL
Trigger: CAGAGGCAGCATTGTCTCCAACCTTCCGTAGTGACA...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTCTTGGCTGGCTCCTTaGCTGGTTCCGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGSWLAP*LVPMLK
Trigger: CTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGA...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTCTTGGCTGGCTCCTTaGCTGGTTCCGATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSSWLAP*LVPMLK
Trigger: CTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGA...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TGCACATTGTGTGGTCGTCCAAATAACTCAATCTTGCGAGTGCCAGGAGATAGTTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: CTLCGRPNNSILRVPGDSFLSGL*VQKALY
Trigger: ATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAA...ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp TGTACGGCCTGTCCGAATGATGCGTTGCAGTTGATTTGTCTTCACCCAAATAATGACCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: CTACPNDALQLICLHPNNDLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTC...ATTATTTGGGTGAAGACAAATCAACTGCAACGCATCATTCGGACAGGCCGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTATAGTCACAGAATTCTaGCACTTGGGCCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAIVTEF*HLGPTS
Trigger: CGAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTAT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp TCTGGGTACCTTTGCTTGAACCGTGCAACCACATCTGGGTCTAGTAGGTGGATCTCATCAGTGTGTTTATaGATAATTCGTCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SGYLCLNRATTSGSSRWISSVCL*IIRLKC
Trigger: GCACTTCAGACGAATTATCAATAAACACACTGATGA...GATCCACCTACTAGACCCAGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGTGTAGTACGGGTATGTaGAGCCTGCGCATCTCATCA +
Preference number: 5 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALCSTGM*SLRISS
Trigger: TGATGAGATGCGCAGGCTCAACATACCCGTACTACA...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCGGATATCAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 5 (lower is better)
Translates to: SHHNCKLAQDTDVQVADINDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...GATATCCGCTACCTGGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACC +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLATLVEA*GISFDT
Trigger: GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATTTCCTTTGACACCAACCTGCTCACCACAGATAACAGATTACCTTATGAAACCACCCTGGTTGAAGCCTaGGGGATTTCCTTTGACACC +
Preference number: 5 (lower is better)
Translates to: ISFDTNLLTTDNRLPYETTLVEA*GISFDT
Trigger: GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGT...GGTTTCATAAGGTAATCTGTTATCTGTGGTGAGCAGGTTGGTGTCAAAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCACAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCT +
Preference number: 5 (lower is better)
Translates to: KFLGLEMIPSGYLCLNRAQSRPW*KPWGFP
Trigger: AGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTG...TGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGGTGATCCAGTTGGGTaGCACATTGTGTGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSGDPVG*HIVWSS
Trigger: GGACGACCACACAATGTGCAACCCAACTGGATCACC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTACCATCTGGGTACCTTaGCTTGAACCGTGCAACCAC +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLATIWVP*LEPCNH
Trigger: GTGGTTGCACGGTTCAAGCAAAGGTACCCAGATGGT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATTTTGTGCTCCACCTATaGAATTGGGCCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHFVLHL*NWAPLL
Trigger: CAGCAGTGGGGCCCAATTCAATAGGTGGAGCACAAA...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMAFYPI*SGRSIW
Trigger: CCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGC...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp ACTCAATCTTGCGAGTGCCAGGAGATAGTCTTTCAATCATGCCATAGATTTCATAGGCAGCATGTTTCCTaGATTTCTTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TQSCECQEIVFQSCHRFHRQHVS*ISWLAP
Trigger: AGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCT...ATGAAATCTATGGCATGATTGAAAGACTATCTCCTGGCACTCGCAAGATTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp ATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTCTGGACCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: ISLFRFSLQSHGYGFLALDLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTC...CAGAGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCATAGTCACAGAATTCTaGCACTTGGGCCCGACCTCG +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGIVTEF*HLGPTS
Trigger: CGAGGTCGGGCCCAAGTGCAAGAATTCTGTGACTAT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATCGTCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCA +
Preference number: 5 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHRLKCS*RQGRSA
Trigger: TGCTGATCGACCCTGTCGCAAGCTGCACTTCAGACG...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp GATCACATCACAATCCAGACCCTGGTTGAAGCCTTGGGGATTTCCTTTGACACCTCATCAGTGTGTTTATaGATAATTCGTCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: DHITIQTLVEALGISFDTSSVCL*IIRLKC
Trigger: GCACTTCAGACGAATTATCAATAAACACACTGATGA...GGTGTCAAAGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTGTGATGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCAATCCAGACCCTGGTaGAAGCCTTGGGGATTTCCT +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSQSRPW*KPWGFP
Trigger: AGGAAATCCCCAAGGCTTCAACCAGGGTCTGGATTG...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCAACCCCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: FLGLEMIPSGYLCLNRATPNNSI*RVPGDS
Trigger: ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGG...GGTTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTCCAAGGGTGATCCAGTaGGGTTGCACATTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSPRVIQ*GCTLCG
Trigger: ACCACACAATGTGCAACCCAACTGGATCACCCTTGG...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGTGGATCCCATCCAGTaGGTTTCCAAGGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSVDPIQ*VSKGDP
Trigger: TGGATCACCCTTGGAAACCAACTGGATGGGATCCAC...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTACAGAATTCTTGCACTaGGGCCCGACCTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LYKYHSSGLAYRAMAMDSTEFLH*GPTFLL
Trigger: GAGCAAGAAGGTCGGGCCCAAGTGCAAGAATTCTGT...AGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543235.5
CDS TCA 90 bp GTTATTTGGGAGTACAGCCTGTATTCTTCCCACACAATGCACTTCTaGAAGTACACCTTCAGGGTCTGGAGGACTTACACAAACCATAAA +
Preference number: 5 (lower is better)
Translates to: VIWEYSLYSSHTMHF*KYTFRVWRTYTNHK
Trigger: TTTATGGTTTGTGTAAGTCCTCCAGACCCTGAAGGTGTACTTTCAGAAGTGCATTGTGTGGGAAGAATACAGGCTGTACTCCCAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536201.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCAGGCAGCATGTTTCCTaGATTTCTTGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGRQHVS*ISWLAP
Trigger: AGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGGACCTTCTTGCTCTGTaGTTCCTTAGTGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: QEIVFQSCHRFHLVYDWWDLLAL*FLSGLL
Trigger: CAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTC...CCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTATCACAACTGCAAACTaGCCCAAGATACTGACGTCC +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLAITTAN*PKILTS
Trigger: GGACGTCAGTATCTTGGGCAAGTTTGCAGTTGTGAT...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCCTTGGGGATTTCCTTaGACACCAACCAAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFPWGFP*TPTKQC
Trigger: ACACTGCTTGGTTGGTGTCAAAGGAAATCCCCAAGG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298717.9
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTCTGGGTACCTTTGCTaGAACCGTGCAACCACATCT +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGSGYLC*NRATTS
Trigger: AGATGTGGTTGCACGGTTCAAGCAAAGGTACCCAGA...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAGGAGATAGTCTTTCAATCATGCCATAGATTTCATCTGGTTTATGACTGGTGGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: QEIVFQSCHRFHLVYDWWFLSGL*VQKALY
Trigger: ATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAA...CCACCAGTCATAAACCAGATGAAATCTATGGCATGATTGAAAGACTATCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
ENST00000544248.1
CDS-3UTR CAA 90 bp GCTGCCAGGGGCCTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTTCATCAGTGTGTTTATaGATAATTCGTCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: AARGLRIHASINFIVNILSSVCL*IIRLKC
Trigger: GCACTTCAGACGAATTATCAATAAACACACTGATGA...AAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAGGCCCCTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537163.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGTGTAGTACGGGTATGTaGAGCCTGCGCATCTCATCA +
Preference number: 5 (lower is better)
Translates to: RRKLLYKYHSSGLAYRAMCSTGM*SLRISS
Trigger: TGATGAGATGCGCAGGCTCAACATACCCGTACTACA...CATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298717.9
ENST00000537163.5
CDS-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 5 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS CCA 90 bp GATTATCTAAATAAGAATTTGTCGACATTGGCATTGTTGACACTTTaGGACAGACAACTGTTTGTTGTGGGGGTTTGTCCCACTATGCAC +
Preference number: 5 (lower is better)
Translates to: DYLNKNLSTLALLTL*DRQLFVVGVCPTMH
Trigger: GTGCATAGTGGGACAAACCCCCACAACAAACAGTTGTCTGTCCCAAAGTGTCAACAATGCCAATGTCGACAAATTCTTATTTAGATAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFFLSGL*VQKALY
Trigger: ATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAA...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CATGCCATAGATTTCATCTGGTTTATGACTGGTGGAACGAACCAAGCAGTGTTCTTTTTCAACAATGGATaGTTCCTTGGCTGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: HAIDFIWFMTGGTNQAVFFFNNG*FLGCCS
Trigger: ACTACAACAGCCAAGGAACAATCCATTGTTGAAAAA...GAACACTGCTTGGTTCGTTCCACCAGTCATAAACCAGATGAAATCTATGGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFCPNDA*QLICLH
Trigger: GTGAAGACAAATCAACTGCAACGCATCATTCGGACA...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp ATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCCCAAATAACTCAATCTaGCGAGTGCCAGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: IVQISLFRFSLQSHGYGFPNNSI*RVPGDS
Trigger: ACTATCTCCTGGCACTCGCAAGATTGAGTTATTTGG...GAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp TATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTCAGTTGGGTTGCACATaGTGTGGTCGTCCAAATAAC +
Preference number: 5 (lower is better)
Translates to: YKFLGLEMIPSGYLCLNRQLGCT*CGRPNN
Trigger: GTTATTTGGACGACCACACAATGTGCAACCCAACTG...ACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGTGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTGTCCGAATGATGCGTaGCAGTTGATTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KCFYKFLGLEMIPSGYLCCPNDA*QLICLH
Trigger: GTGAAGACAAATCAACTGCAACGCATCATTCGGACA...GCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCTATGGATTCTTAGCTTCATCAGTGTGTTTATaGATAATTCGTCTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QISLFRFSLQSHGYGFLASSVCL*IIRLKC
Trigger: GCACTTCAGACGAATTATCAATAAACACACTGATGA...AGCTAAGAATCCATAGCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATGGCAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 5 (lower is better)
Translates to: KKAIVQISLFRFSLQSHGNDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...GCCATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp CTCAGAATCCATGCAAGCATCAATTTCATAGTGAACATACTTGCAGGTATCCATTTTTTCAACAATGGATaGTTCCTTGGCTGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: LRIHASINFIVNILAGIHFFNNG*FLGCCS
Trigger: ACTACAACAGCCAAGGAACAATCCATTGTTGAAAAA...ATGGATACCTGCAAGTATGTTCACTATGAAATTGATGCTTGCATGGATTCTGAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS-3UTR CAA 90 bp TGCTTCTATAAATTCTTAGGTTTAGAGATGATACCATCTGGGTACCTTTGCTTGAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 5 (lower is better)
Translates to: CFYKFLGLEMIPSGYLCLNDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...CAAGCAAAGGTACCCAGATGGTATCATCTCTAAACCTAAGAATTTATAGAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537163.5
ENST00000539760.5
ENST00000543235.5
CDS-3UTR CAA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATAATGATGCGTTGCAGTaGATTTGTCTTCACCCAAAT +
Preference number: 5 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHNDALQ*ICLHPN
Trigger: ATTTGGGTGAAGACAAATCAACTGCAACGCATCATT...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS-3UTR CAA 90 bp AAGAAGAAAGCTATTGTACAAATATCACTCTTCAGGTTTAGCTTACAGAGCCATTTTTTCAACAATGGATaGTTCCTTGGCTGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: KKKAIVQISLFRFSLQSHFFNNG*FLGCCS
Trigger: ACTACAACAGCCAAGGAACAATCCATTGTTGAAAAA...ATGGCTCTGTAAGCTAAACCTGAAGAGTGATATTTGTACAATAGCTTTCTTCTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000298717.9
ENST00000537163.5
ENST00000539760.5
CDS TCA 72 bp GCTGAGCAGCCTCACAAAGGCGACGTCCTCGCAGTCTaGAGAGGAGTGGGCAAGGCGGACGAGGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: AEQPHKGDVLAV*RGVGKADEGGA
Trigger: AGCCCCACCCTCGTCCGCCTTGCCCACTCCTCTTCAGACTGCGAGGACGTCGCCTTTGTGAGGCTGCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545319.1
ENST00000545788.1
CDS GCA 72 bp CGCCTCCGCTGCAGCCTCTCCCGCAGAGAGTCCAGCTaGTTCTTGTGGGCCTGGATAGAGCTCCACGTGTCC +
Preference number: 6 (lower is better)
Translates to: RLRCSLSRRESS*FLWAWIELHVS
Trigger: GGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS GCA 72 bp ACCGAGGCCCAGCGTGAGGAGGAACCGCGAACTACTTaGAGAAGGGCGAACGTCTGCTGCCAAGTGCCCCGA +
Preference number: 6 (lower is better)
Translates to: TEAQREEEPRTT*RRANVCCQVPR
Trigger: TCGGGGCACTTGGCAGCAGACGTTCGCCCTTCTGCAAGTAGTTCGCGGTTCCTCCTCACGCTGGGCCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS CCA 72 bp CGCAGTCTGAAGAGGAGTGGGCAAGGCGGACGAGGGTaGGGCTCAAGCGTCCGTCCGGTAAAAGTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: RSLKRSGQGGRG*GSSVRPVKVSW
Trigger: CCAGCTCACTTTTACCGGACGGACGCTTGAGCCCCACCCTCGTCCGCCTTGCCCACTCCTCTTCAGACTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS CAA 90 bp TTCCGCCTCCGCTGCAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTCCACGTGTCCGACATCCTAGTCTCC +
Preference number: 6 (lower is better)
Translates to: FRLRCSLSRRESSCF*WAWIELHVSDILVS
Trigger: GGAGACTAGGATGTCGGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCGGAGGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS TCA 72 bp GAGCTCCACGTGTCCGACATCCTAGTCTCCCAGCCCTaGCACCTCTCGAATAAGGCGCGGCGGACTAGCACC +
Preference number: 6 (lower is better)
Translates to: ELHVSDILVSQP*HLSNKARRTST
Trigger: GGTGCTAGTCCGCCGCGCCTTATTCGAGAGGTGTCAGGGCTGGGAGACTAGGATGTCGGACACGTGGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS GCA 72 bp CTGTTCTGCACGCCGCTTCTGCCCTGTGACAGTCCCTaGTACCTCCCCAGGGCCCTTCTTTTCTGCCACAGC +
Preference number: 6 (lower is better)
Translates to: LFCTPLLPCDSP*YLPRALLFCHS
Trigger: GCTGTGGCAGAAAAGAAGGGCCCTGGGGAGGTAGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS CCA 72 bp CGCAGTCTGAAGAGGAGTGGGCAAGGCGGACGAGGGTaGGGCTCAAGCGTCCGTCCGGTAAAAGTGAGCCAA +
Preference number: 6 (lower is better)
Translates to: RSLKRSGQGGRG*GSSVRPVKVSQ
Trigger: TTGGCTCACTTTTACCGGACGGACGCTTGAGCCCCACCCTCGTCCGCCTTGCCCACTCCTCTTCAGACTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545319.1
CDS CAA 72 bp CGCTGCAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTaGTGGGCCTGGATAGAGCTCCACGTGTCCGACATC +
Preference number: 6 (lower is better)
Translates to: RCSLSRRESSCF*WAWIELHVSDI
Trigger: GATGTCGGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS CCA 72 bp GGGCTTAGGGCCACCAGAGGTGGGTGCAGTAGGCACTaGGCTGTCACTACGGAAGGTTGGAGACAATGCTGC +
Preference number: 6 (lower is better)
Translates to: GLRATRGGCSRH*AVTTEGWRQCC
Trigger: GCAGCATTGTCTCCAACCTTCCGTAGTGACAGCCCAGTGCCTACTGCACCCACCTCTGGTGGCCCTAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS CCA 72 bp CTCTCCCGCAGAGAGTCCAGCTGCTTCTTGTGGGCCTaGATAGAGCTCCACGTGTCCGACATCCTAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSRRESSCFLWA*IELHVSDILVS
Trigger: GGAGACTAGGATGTCGGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS CCA 72 bp TGCAGCCTCTCCCGCAGAGAGTCCAGCTGCTTCTTGTaGGCCTGGATAGAGCTCCACGTGTCCGACATCCTA +
Preference number: 6 (lower is better)
Translates to: CSLSRRESSCFL*AWIELHVSDIL
Trigger: TAGGATGTCGGACACGTGGAGCTCTATCCAGGCCCACAAGAAGCAGCTGGACTCTCTGCGGGAGAGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000367606.7
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000545319.1
ENST00000545788.1
CDS TCA 72 bp CCGGTAAAAGTGAGCTGGAAGAACCGAGGCCCAGCGTaGGGAGGAACCGCGAACTACTTGCAGAAGGGCGAA +
Preference number: 6 (lower is better)
Translates to: PVKVSWKNRGPA*GGTANYLQKGE
Trigger: TTCGCCCTTCTGCAAGTAGTTCGCGGTTCCTCCTCACGCTGGGCCTCGGTTCTTCCAGCTCACTTTTACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545788.1
CDS GCA 72 bp ACTGGCAAAGGCAGCTACTGTAGTCGAGTCCTGTTCTaGACGCCGCTTCTGCCCTGTGACAGTCCCTGCTAC +
Preference number: 6 (lower is better)
Translates to: TGKGSYCSRVLF*TPLLPCDSPCY
Trigger: GTAGCAGGGACTGTCACAGGGCAGAAGCGGCGTGCAGAACAGGACTCGACTACAGTAGCTGCCTTTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS GCA 72 bp CCCAACTCCATGGCCCTGAGGTGGGAAGAGTCGGTCTaGACTGGAATCACCTCCGACACTCTGTGTAAGAGC +
Preference number: 6 (lower is better)
Translates to: PNSMALRWEESV*TGITSDTLCKS
Trigger: GCTCTTACACAGAGTGTCGGAGGTGATTCCAGTGCAGACCGACTCTTCCCACCTCAGGGCCATGGAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539760.5
CDS CAA 72 bp AGCTGCAAACTTCTGCAGGAGGCTTTCTACCCCATCTaGAGTGGCAGGAGCATCTGGCGTGGAGATGGCAAG +
Preference number: 6 (lower is better)
Translates to: SCKLLQEAFYPI*SGRSIWRGDGK
Trigger: CTTGCCATCTCCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGCCTCCTGCAGAAGTTTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS CAA 90 bp AAACCCATCCCACCTCATTCCCTTCCAAGAGACCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCATCACTGGCTTTCATGCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: KPIPPHSLPRDLKCS*RQGRSASLAFMHSS
Trigger: GGAGGAGTGCATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGGTCTCTTGGAAGGGAATGAGGTGGGATGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536201.5
ENST00000542054.5
CDS CCA 72 bp TGGCAGGAGCATCTGGCGTGGAGATGGCAAGACAGATaGACACAGCATCAGTGGGCAATGTTAAGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: WQEHLAWRWQDR*TQHQWAMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCTCCACGCCAGATGCTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS CCA 72 bp CAAACTTCTGCAGGAGGCTTTCTACCCCATCTTGAGTaGCAGGAGCATCTGGCGTGGAGATGGCAAGACAGA +
Preference number: 6 (lower is better)
Translates to: QTSAGGFLPHLE*QEHLAWRWQDR
Trigger: TCTGTCTTGCCATCTCCACGCCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGCCTCCTGCAGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298717.9
ENST00000377543.3
ENST00000396522.6
ENST00000536201.5
ENST00000537163.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
CDS CCA 72 bp CCCCAGGGCCCTTCTTTTCTGCCACAGCACCCATCATaGCAGAGAGCTTGGAATGGTCAGCATAGGTTACAA +
Preference number: 6 (lower is better)
Translates to: PQGPSFLPQHPS*QRAWNGQHRLQ
Trigger: TTGTAACCTATGCTGACCATTCCAAGCTCTCTGCCATGATGGGTGCTGTGGCAGAAAAGAAGGGCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS CCA 72 bp CAAACTTCTGCAGGAGGCTTTCTACCCCATCTTGAGTaGCAGGAGCATCTGGCTAGAGAACGAGGGGAGGTA +
Preference number: 6 (lower is better)
Translates to: QTSAGGFLPHLE*QEHLARERGEV
Trigger: TACCTCCCCTCGTTCTCTAGCCAGATGCTCCTGCCACTCAAGATGGGGTAGAAAGCCTCCTGCAGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544500.5
CDS CAA 72 bp CCACCTCATTCCCTTCCAAGAGACCTGAAGTGCAGCTaGCGACAGGGTCGATCAGCATCACTGGCTTTCATG +
Preference number: 6 (lower is better)
Translates to: PPHSLPRDLKCS*RQGRSASLAFM
Trigger: CATGAAAGCCAGTGATGCTGATCGACCCTGTCGCAAGCTGCACTTCAGGTCTCTTGGAAGGGAATGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536201.5
ENST00000542054.5
CDS CCA 72 bp TCTGTCAGGTCATTACCGTGGAGATGGCAAGACAGATaGACACAGCATCAGTGGGCAATGTTAAGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: SVRSLPWRWQDR*TQHQWAMLRPD
Trigger: ATCTGGCCTTAACATTGCCCACTGATGCTGTGTCCATCTGTCTTGCCATCTCCACGGTAATGACCTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544500.5
CDS CAA 72 bp AGAAACACCCAGTGCCACTCTGTACGGGCCACTAAATaGGGCACTGCGGATATAAAGGTTCATTCCTCGCTT +
Preference number: 6 (lower is better)
Translates to: RNTQCHSVRATK*GTADIKVHSSL
Trigger: AAGCGAGGAATGAACCTTTATATCCGCAGTGCCCAATTTAGTGGCCCGTACAGAGTGGCACTGGGTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545319.1
CDS CAA 90 bp TACTCATTCAGAAACACCCAGTGCCACTCTGTACGGGCCACTAAATaGGGCACTGCGGATATAAAGGTTCATTCCTCGCTTACTGTACCC +
Preference number: 6 (lower is better)
Translates to: YSFRNTQCHSVRATK*GTADIKVHSSLTVP
Trigger: GGGTACAGTAAGCGAGGAATGAACCTTTATATCCGCAGTGCCCAATTTAGTGGCCCGTACAGAGTGGCACTGGGTGTTTCTGAATGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545319.1
CDS GCA 72 bp ACAGACAACTGTTTGTTGTGGGGGTTTGTCCCACTATaGACTGTAGGATGTTTGACAACATCCCTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: TDNCLLWGFVPL*TVGCLTTSLAS
Trigger: AGAGGCCAGGGATGTTGTCAAACATCCTACAGTGCATAGTGGGACAAACCCCCACAACAAACAGTTGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CCA 72 bp GATCAACATCTGAGGCAGCATGTTTCCTTGATTTCTTaGCTGGCTCCTTTGCTGGTTCCGATGCTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: DQHLRQHVSLIS*LAPLLVPMLKS
Trigger: ACTCTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCTCAGATGTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS CAA 72 bp AGATCAACATCTGAGGCAGCATGTTTCCTTGATTTCTaGGCTGGCTCCTTTGCTGGTTCCGATGCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: RSTSEAACFLDF*AGSFAGSDAEE
Trigger: CTCTTCAGCATCGGAACCAGCAAAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCTCAGATGTTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298717.9
ENST00000396522.6
ENST00000536201.5
ENST00000538267.5
ENST00000539760.5
ENST00000542054.5
ENST00000543235.5
ENST00000544248.1
ENST00000544500.5
CDS CAA 72 bp CCCGACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTATCTCCAGATCAACATC +
Preference number: 6 (lower is better)
Translates to: PDLLALLFLSGL*VQKALYLQINI
Trigger: GATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542054.5
ENST00000543235.5
CDS TCA 72 bp GAGTACAGCCTGTATTCTTCCCACACAATGCACTTCTaGAAGTACACCTTCAGGGTCTGGAGGACTTACACA +
Preference number: 6 (lower is better)
Translates to: EYSLYSSHTMHF*KYTFRVWRTYT
Trigger: TGTGTAAGTCCTCCAGACCCTGAAGGTGTACTTTCAGAAGTGCATTGTGTGGGAAGAATACAGGCTGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536201.5
CDS CCA 72 bp TGGCCCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCT +
Preference number: 6 (lower is better)
Translates to: WPFLLCCSLVDC*FRRLSISRSTS
Trigger: AGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396522.6
CDS CCA 72 bp GATCAACATCTGAGGCAGCATGTTTCCTTGATTTCTTaGCTGGCTCCTTTGCTGGTTCCGATGCTCAATCAA +
Preference number: 6 (lower is better)
Translates to: DQHLRQHVSLIS*LAPLLVPMLNQ
Trigger: TTGATTGAGCATCGGAACCAGCAAAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCTCAGATGTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS CCA 72 bp CCGACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCT +
Preference number: 6 (lower is better)
Translates to: PTFLLCCSLVDC*FRRLSISRSTS
Trigger: AGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTCGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542054.5
ENST00000543235.5
CDS CAA 72 bp ATGGCCCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTATCTCCAGATCAACATC +
Preference number: 6 (lower is better)
Translates to: MALLALLFLSGL*VQKALYLQINI
Trigger: GATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396522.6
CDS CAA 72 bp CCCTACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTATCTCCAGATCAACATC +
Preference number: 6 (lower is better)
Translates to: PYLLALLFLSGL*VQKALYLQINI
Trigger: GATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CAA 72 bp AGATCAACATCTGAGGCAGCATGTTTCCTTGATTTCTaGGCTGGCTCCTTTGCTGGTTCCGATGCTCAATCA +
Preference number: 6 (lower is better)
Translates to: RSTSEAACFLDF*AGSFAGSDAQS
Trigger: TGATTGAGCATCGGAACCAGCAAAGGAGCCAGCCAAGAAATCAAGGAAACATGCTGCCTCAGATGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537163.5
CDS CCA 72 bp CTGACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCT +
Preference number: 6 (lower is better)
Translates to: LTFLLCCSLVDC*FRRLSISRSTS
Trigger: AGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298717.9
ENST00000536201.5
ENST00000537163.5
ENST00000539760.5
ENST00000544500.5
CDS CCA 72 bp CCTACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCT +
Preference number: 6 (lower is better)
Translates to: PTFLLCCSLVDC*FRRLSISRSTS
Trigger: AGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CAA 72 bp ACTGACCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTATCTCCAGATCAACATC +
Preference number: 6 (lower is better)
Translates to: TDLLALLFLSGL*VQKALYLQINI
Trigger: GATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGGTCAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298717.9
ENST00000536201.5
ENST00000537163.5
ENST00000539760.5
ENST00000544500.5
CDS CCA 72 bp TTCGTCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTTaGTTCAGAAGGCTCTCTATCTCCAGATCAACATCT +
Preference number: 6 (lower is better)
Translates to: FVFLLCCSLVDC*FRRLSISRSTS
Trigger: AGATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGACGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS CAA 72 bp ATTCGTCTTCTTGCTCTGTTGTTCCTTAGTGGACTGTaGGTTCAGAAGGCTCTCTATCTCCAGATCAACATC +
Preference number: 6 (lower is better)
Translates to: IRLLALLFLSGL*VQKALYLQINI
Trigger: GATGTTGATCTGGAGATAGAGAGCCTTCTGAACCAACAGTCCACTAAGGAACAACAGAGCAAGAAGACGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544248.1
CDS TCA 72 bp GTATGTTTCATCTTTACCTATTACCACAGTACCAAATaGTGGGTCAGATCAAGCTCTCGGTCAGAAGACAAG +
Preference number: 6 (lower is better)
Translates to: VCFIFTYYHSTK*WVRSSSRSEDK
Trigger: CTTGTCTTCTGACCGAGAGCTTGATCTGACCCATCATTTGGTACTGTGGTAATAGGTAAAGATGAAACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367606.7
CDS CAA 72 bp AGGCCACTGATCAACAAAGTGTACAAAATGACAATGTaGGGGGCCAACAGTGTTACCTATAACACTCACAAA +
Preference number: 6 (lower is better)
Translates to: RPLINKVYKMTM*GANSVTYNTHK
Trigger: TTTGTGAGTGTTATAGGTAACACTGTTGGCCCCCAACATTGTCATTTTGTACACTTTGTTGATCAGTGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396522.6
CDS CCA 72 bp ATATGCATTTGGGATGAAATTAAAATGGAAGAGGCCTaGTTCCTACCGCTAAGCATTATGTTAACATCCCCT +
Preference number: 6 (lower is better)
Translates to: ICIWDEIKMEEA*FLPLSIMLTSP
Trigger: AGGGGATGTTAACATAATGCTTAGCGGTAGGAACCAGGCCTCTTCCATTTTAATTTCATCCCAAATGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CAA 72 bp GATTATCTAAATAAGAATTTGTCGACATTGGCATTGTaGACACTTTGGGACAGACAACTGTTTGTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: DYLNKNLSTLAL*TLWDRQLFVVG
Trigger: CCCCACAACAAACAGTTGTCTGTCCCAAAGTGTCAACAATGCCAATGTCGACAAATTCTTATTTAGATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538267.5
CDS CAA 72 bp ACAGATTATCTAAATAAGAATTTGTCGACATTGGCATaGTTGACACTTTGGGACAGACAACTGTTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: TDYLNKNLSTLA*LTLWDRQLFVV
Trigger: CACAACAAACAGTTGTCTGTCCCAAAGTGTCAACAATGCCAATGTCGACAAATTCTTATTTAGATAATCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538267.5