RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL26 (Homo sapiens)

Ensembl gene IDs: ENSG00000130731

Ensembl transcript IDs: ENST00000301686.13, ENST00000338401.8, ENST00000397664.8, ENST00000397665.6, ENST00000397666.6, ENST00000448973.6, ENST00000456420.6, ENST00000564039.1, ENST00000565163.5, ENST00000565799.1, ENST00000568077.5, ENST00000568773.1, ENST00000568830.1, ENST00000614890.4

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCT +
Preference number: 1 (lower is better)
Translates to: RTCFILSRLGPSASG*EHRLGGAVVHKVRP
Trigger: AGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
3UTR-3UTR GCA 90 bp GACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: DWVGLSSTRSGLGRQGSCSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...GCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
3UTR-3UTR GCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
3UTR-3UTR CCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAAGAGCACAGACTGGGTaGGGCTGTCGTCCACAAGGT +
Preference number: 2 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGRAQTG*GCRPQG
Trigger: ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCT...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
3UTR-3UTR GCA 90 bp GTGAAGGAGGGGCTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCAGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: VKEGLSFSGRSGICCWLAGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...TGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAGCCCCTCCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
3UTR-3UTR CCA 90 bp AGGGGCTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RGLVFPEDQAFVVGWHVHPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...GTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
3UTR CCA 72 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGG +
Preference number: 3 (lower is better)
Translates to: GWALRPAAESTD*VGLSSTRSGLG
Trigger: CCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
3UTR TCA 72 bp TTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGGGCTGTCGTCCACAAG +
Preference number: 3 (lower is better)
Translates to: FILSRLGPSASG*EHRLGGAVVHK
Trigger: CTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RPAAESTDWVGLSSTRSGPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...GCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: DWVGLSSTRSGLGRQGSCPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...GCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp CGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RPAAESTDWVGLSSTRSGKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...GCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTG +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSVRPWA*VVAAML
Trigger: CAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGAC...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GQRLRAQTGWGCRPQGPAKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...GGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSGPGLA*WPRCCP
Trigger: TGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCC...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPPSASG*EHRLGG
Trigger: CCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGG...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HRLGGAVVHKVRPREAGFAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...GAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp TCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: STRSGLGRQGSCLTEPPAAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCVRPWA*VVAAML
Trigger: CAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGAC...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: QAGPFGQRLRAQTGWGCRTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...ACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: RPAAESTDWVGLSSTRSGAGPSR*SGPGLA
Trigger: CGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC...GCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp GAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGCCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EHRLGGAVVHKVRPREAGPSASG*EHRLGG
Trigger: CCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGG...CCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp TCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: STRSGLGRQGSCLTEPPAKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp TGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WVGLSSTRSGLGRQGSCLSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...GAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAATCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQTLVRP*ACVVAA
Trigger: CGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGT...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: WVGLSSTRSGLGRQGSCLAGPSR*SGPGLA
Trigger: CGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC...GAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCAGGTCCAGCGACTGTaGCAGGATCCCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAGPFGQRLRAQTGWGCRQVQRL*QDPAPV
Trigger: CACTGGGGCGGGATCCTGCCACAGTCGCTGGACCTG...ACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGGCAGGGCCCTGGGTTTaGGCAGGTGTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRAGPWV*AGVLLL
Trigger: GAGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGC...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397664.8
ENST00000397666.6
CDS-3UTR TCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGCAGGGCCCTGGGTTTaGGCAGGTGTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQAGPWV*AGVLLL
Trigger: GAGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGC...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397664.8
ENST00000397666.6
CDS-3UTR TCA 90 bp GTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACACCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGLSSTRSGLGRQGSCLTPSASG*EHRLGG
Trigger: CCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGG...TGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR TCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCCCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSPSASG*EHRLGG
Trigger: CCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGG...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp CCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCTTCGGCCAGCGGCTaGGAGCACAGACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PFGQRLRAQTGWGCRPQGPSASG*EHRLGG
Trigger: CCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGG...ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCACCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: ACPPSSPGAGHWPFPGPPPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ESTDWVGLSSTRSGLGRQSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...CTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VRASQSLRQGCRCAGVKESTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...CTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTG +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGVRPWA*VVAAML
Trigger: CAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGAC...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: AESTDWVGLSSTRSGLGRTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...CCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVVHKVRPREAGFVPHRALSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGLSSTRSGLGRQGSCLTGPGLA*WPRCCP
Trigger: TGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCC...TGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGGPGLA*WPRCCP
Trigger: TGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCC...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VRASQSLRQGCRCAGVKETLVRP*ACVVAA
Trigger: CGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGT...CTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSTLVRP*ACVVAA
Trigger: CGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGT...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSAGPSR*SGPGLA
Trigger: CGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGCAGGTCCAGCGACTGTaGCAGGATCCCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRQVQRL*QDPAPV
Trigger: CACTGGGGCGGGATCCTGCCACAGTCGCTGGACCTG...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGGTGTCCTGCTGCTCTaGAGAGCCCCTCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPGVLLL*RAPPCS
Trigger: GCTGCACGGAGGGGCTCTTCAGAGCAGCAGGACACC...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000397666.6
CDS-3UTR TCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGGGAGATCTTCCCATTaGTGGCATAGGGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSGRSSH*WHRARR
Trigger: CCTACGGGCCCTATGCCATCAATGGGAAGATCTCCC...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301686.13
CDS-3UTR GCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCATCAGGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: QEGCVPKPPFWVPASEHQAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...CTGATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564039.1
CDS-3UTR GCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGACCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRPREVR*VLAGAR
Trigger: TCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGG...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGAAGGCCCGCGCGAAGTaGGCTGCGTGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEKARAK*AACWPE
Trigger: CTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTT...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPASTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTG +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSVRPWA*VVAAML
Trigger: CAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGAC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR GCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPEQVSC*SEEPLR
Trigger: ACGGAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000397666.6
CDS-3UTR GCA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AVVHKVRPREAGFVPHRASLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp GCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AESTDWVGLSSTRSGLGRSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...CCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp TTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: FGQRLRAQTGWGCRPQGPGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...CGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSAARAR*DPCSAP
Trigger: CGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGC...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSTRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp ATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGGAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: MSTILSRSRPLAFPRSSRKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...CCTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAACCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAGAGCACAGACTGGGTaGGGCTGTCGTCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: GWALRPAAESTDWVGLSSRAQTG*GCRPQG
Trigger: ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCT...GGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGAGAGCACAGACTGGGTaGGGCTGTCGTCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSRAQTG*GCRPQG
Trigger: ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCT...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCAESTD*VGLSST
Trigger: TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCGGTGTCCTGCTGCTCTaGAGAGCCCCTCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSGVLLL*RAPPCS
Trigger: GCTGCACGGAGGGGCTCTTCAGAGCAGCAGGACACC...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR TCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAGGGAGATCTTCCCATTaGTGGCATAGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPGRSSH*WHRAPC
Trigger: GCACGGAGCCCTATGCCATCAATGGGAAGATCTCCC...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614890.4
CDS-3UTR GCA 90 bp GAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: EHRLGGAVVHKVRPREAGAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...CCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp ATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: MSTILSRSRPLAFPRSSRSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...CCTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSFEQVS*CSEEPL
Trigger: GAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000397666.6
CDS-3UTR GCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCAGCCTCCGGCAGGGATaGAGGTGTGCGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSSLRQG*RCAGVK
Trigger: CTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCT...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR GCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASETRTPR*AGSRYC
Trigger: GCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp TCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSRRAVSRSPHSGFLHLSLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...GCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp TGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: WHVHHPLQEQATGLSQVLLSRQR*STSDGC
Trigger: GCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAG...GAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCCAGGTCCAGCGACTGTaGCAGGATCCCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSQVQRL*QDPAPV
Trigger: CACTGGGGCGGGATCCTGCCACAGTCGCTGGACCTG...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACACGCAGGGGGCTGACATaGGCCATGTTGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: WALRPAAESTDWVGLSSTRRGLT*AMLMQS
Trigger: GCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCG...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGCGCAGGGGGCTGACATaGGCCATGTTGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRRRGLT*AMLMQS
Trigger: GCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCG...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRAESTD*VGLSST
Trigger: TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQAESTD*VGLSST
Trigger: TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: DWVGLSSTRSGLGRQGSCAESTD*VGLSST
Trigger: TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC...GCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTGCTGAGAGCACAGACTaGGTGGGGCTGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPAESTD*VGLSST
Trigger: TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp ACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGCCGAAGCCCCCATTCTaGGTTCCTGTCCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TDWVGLSSTRSGLGRQGSPKPPF*VPVQAA
Trigger: CGCTGCCTGGACAGGAACCCAGAATGGGGGCTTCGG...CGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338401.8
CDS-3UTR TCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTGGACATGCTTTATTCTaGGCAGGCTGGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPGHALF*AGWALR
Trigger: CCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCC...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR TCA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAGGACATGCTTTATTCTaGGCAGGCTGGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: WALRPAAESTDWVGLSSTGHALF*AGWALR
Trigger: CCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCC...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCCTGGGGTTTGGAGAATaGAAGGGCACCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSLGFGE*KGTPSP
Trigger: GGGGGAGGGGGTGCCCTTTCATTCTCCAAACCCCAG...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR TCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGGGGAGATCTTCCCATTaGTGGCATAGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGGRSSH*WHRAVG
Trigger: GCCCACAGCCCTATGCCATCAATGGGAAGATCTCCC...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR GCA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AGWALRPAAESTDWVGLSYCRST*KMGSLF
Trigger: GAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTA...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp CACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: HRLGGAVVHKVRPREAGFAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...GAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR GCA 90 bp GTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: VRASQSLRQGCRCAGVKEEQVSC*SEEPLR
Trigger: ACGGAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...CTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000456420.6
CDS-3UTR GCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTTTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCFEQVS*CSEEPL
Trigger: GAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000397666.6
CDS-3UTR GCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGGGGAGGCAGGGTTCGTaGCTCACAGAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQGRQGS*LTEPPA
Trigger: TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCC...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR GCA 90 bp GAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ESTDWVGLSSTRSGLGRQEQVSC*SEEPLS
Trigger: GGACAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...CTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397664.8
CDS-3UTR CCA 90 bp CTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LGGAVVHKVRPREAGFVPAARAR*DPCSAP
Trigger: CGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGC...AGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRAARAR*DPCSAP
Trigger: CGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGC...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRGPGLA*WPRCCP
Trigger: TGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCC...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGCGCAGGGGGCTGACATaGGCCATGTTGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VRASQSLRQGCRCAGVKERRGLT*AMLMQS
Trigger: GCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCG...CTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACCGAAGCCCCCATTCTaGGTTCCTGCATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPPKPPF*VPASEH
Trigger: ATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGG...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCGAAGCCCCCATTCTaGGTTCCTGCATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QAGPFGQRLRAQTGWGCRPKPPF*VPASEH
Trigger: ATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGG...ACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGAGAGCACAGACTGGGTaGGGCTGTCGTCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGRAQTG*GCRPQG
Trigger: ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCT...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR TCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGGTGTCCTGCTGCTCTaGAGAGCCCCTCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRGVLLL*RAPPCS
Trigger: GCTGCACGGAGGGGCTCTTCAGAGCAGCAGGACACC...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000397666.6
CDS-3UTR TCA 90 bp TCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGACATGCTTTATTCTaGGCAGGCTGGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: STRSGLGRQGSCLTEPPAGHALF*AGWALR
Trigger: CCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCC...TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR TCA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCGGACATGCTTTATTCTaGGCAGGCTGGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: AVVHKVRPREAGFVPHRAGHALF*AGWALR
Trigger: CCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCC...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR TCA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGACATGCTTTATTCTaGGCAGGCTGGGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSGHALF*AGWALR
Trigger: CCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCC...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR TCA 90 bp TCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCCTGGGGTTTGGAGAATaGAAGGGCACCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SSRRAVSRSPHSGFLHLSLGFGE*KGTPSP
Trigger: GGGGGAGGGGGTGCCCTTTCATTCTCCAAACCCCAG...GCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR GCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSEQVSC*SEEPLS
Trigger: GGACAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp GCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: AESTDWVGLSSTRSGLGRAARAR*DPCSAP
Trigger: CGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGC...CCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGACAGGTCCAGCGACTGTaGCAGGATCCCGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRQVQRL*QDPAPV
Trigger: CACTGGGGCGGGATCCTGCCACAGTCGCTGGACCTG...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCACGCAGGGGGCTGACATaGGCCATGTTGATGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPARRGLT*AMLMQS
Trigger: GCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCG...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGATGGCATAGGGCTGTaGGCATGGGGACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSDGIGL*AWGHSP
Trigger: TGGGCTGTGTCCCCATGCCCACAGCCCTATGCCATC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR TCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGGGAGATCTTCCCATTaGTGGCATAGGGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSGRSSH*WHRARR
Trigger: CCTACGGGCCCTATGCCATCAATGGGAAGATCTCCC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568077.5
CDS-3UTR TCA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACACTGGGTTCCTGCATCTaGGCATCAGGTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: WALRPAAESTDWVGLSSTLGSCI*ASGQSP
Trigger: TGGACTTTGACCTGATGCTCAGATGCAGGAACCCAG...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR GCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGYCRST*KMGSLF
Trigger: GAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTA...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp TCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SSRRAVSRSPHSGFLHLSAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...GCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGGCCGGCAGCAGGACATaGTTTATTCTGAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AESTDWVGLSSTRSGLGRAGSRT*FILSRL
Trigger: CAGCCTGCTCAGAATAAAGCATGTCCTGCTGCCGGC...CCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338401.8
ENST00000614890.4
CDS-3UTR GCA 90 bp GCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ACPPSSPGAGHWPFPGPPEQVSC*SEEPLS
Trigger: GGACAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACATTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VGLSSTRSGLGRQGSCLTFEQVS*CSEEPL
Trigger: CAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...TGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397664.8
CDS-3UTR GCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAAGCCTGGGACAGACTTaGAGGCTGGGGTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGSLGQT*RLGFGE
Trigger: TTCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCT...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCAGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPAAARAR*DPCSAP
Trigger: CGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGC...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp CAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: QAGPFGQRLRAQTGWGCRAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...ACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTTCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: EQAGPFGQRLRAQTGWGCSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...ACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCGGGGACACAGCCCACTaGACCAAGGTCGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSGDTAH*TKVGVF
Trigger: AAATACCCCGACCTTGGTCCAGTGGGCTGTGTCCCC...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CCA 90 bp TTCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCGGGGACACAGCCCACTaGACCAAGGTCGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: FPGPPGGLCPEAPILGSCGDTAH*TKVGVF
Trigger: AAATACCCCGACCTTGGTCCAGTGGGCTGTGTCCCC...GCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGATAGGGCTGTGGGCATaGGGACACAGCCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEIGLWA*GHSPLD
Trigger: GTCCAGTGGGCTGTGTCCCCATGCCCACAGCCCTAT...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGGATGGCATAGGGCTGTaGGCATGGGGACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQDGIGL*AWGHSP
Trigger: TGGGCTGTGTCCCCATGCCCACAGCCCTATGCCATC...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR TCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGACTGGGTTCCTGCATCTaGGCATCAGGTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGLGSCI*ASGQSP
Trigger: TGGACTTTGACCTGATGCTCAGATGCAGGAACCCAG...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp CCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PFGQRLRAQTGWGCRPQGYCRST*KMGSLF
Trigger: GAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTA...ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AVVHKVRPREAGFVPHRAYCRST*KMGSLF
Trigger: GAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTA...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR GCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRAGSRY*RSTCKM
Trigger: CATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGC...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR GCA 90 bp TTCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCTTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FPGPPGGLCPEAPILGSCFEQVS*CSEEPL
Trigger: GAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...GCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR GCA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPAFEQVS*CSEEPL
Trigger: CAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGCCTGGGACAGACTTaGAGGCTGGGGTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSSLGQT*RLGFGE
Trigger: TTCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCT...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CCA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAAAGTCCACGTTGCTCTaGGGGGAGATCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGKSTLL*GEIFPL
Trigger: CAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTT...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp GAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGAAGTCCACGTTGCTCTaGGGGGAGATCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: ESTDWVGLSSTRSGLGRQKSTLL*GEIFPL
Trigger: CAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTT...CTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WALRPAAESTDWVGLSSTAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACATCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: WALRPAAESTDWVGLSSTSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAATCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGGACAGACTTGCAGGCTaGGGTTTGGAGAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGDRLAG*GLENER
Trigger: CCTTTCATTCTCCAAACCCCAGCCTGCAAGTCTGTC...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR TCA 90 bp TTCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCCTGGGTTCCTGCATCTaGGCATCAGGTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: FPGPPGGLCPEAPILGSCLGSCI*ASGQSP
Trigger: TGGACTTTGACCTGATGCTCAGATGCAGGAACCCAG...GCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR TCA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCCTGGGTTCCTGCATCTaGGCATCAGGTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSLGSCI*ASGQSP
Trigger: TGGACTTTGACCTGATGCTCAGATGCAGGAACCCAG...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR TCA 90 bp TCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCATCGGGAGATCTTCCCATTaGTGGCATAGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SRRAVSRSPHSGFLHLSIGRSSH*WHRAVG
Trigger: GCCCACAGCCCTATGCCATCAATGGGAAGATCTCCC...GATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564039.1
CDS-3UTR GCA 90 bp GTGAAGGAGGGGCTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCAGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VKEGLSFSGRSGICCWLAAKCAA*WPEPEA
Trigger: GGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGC...TGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAGCCCCTCCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR GCA 90 bp GCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCATTTGAGCAGGTGTCCTaGTGCTCTGAAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ACPPSSPGAGHWPFPGPPFEQVS*CSEEPL
Trigger: CAGGGGCTCTTCAGAGCAGCAGGACACCTGCTCAAA...TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp TTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCTCTCCAGAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: FPEDQAFVVGWHVHHPLQKCAAC*PEPEAT
Trigger: GGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTT...CTGGAGAGGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp CGGCAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAAGTCCACGTTGCTCTaGGGGGAGATCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: RQQDMLYSEQAGPFGQRLKSTLL*GEIFPL
Trigger: CAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTT...CAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CCA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAAGTCCACGTTGCTCTaGGGGGAGATCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSKSTLL*GEIFPL
Trigger: CAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTT...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGCCGAAGCCCCCATTCTaGGTTCCTGCATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQPKPPF*VPASEH
Trigger: ATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGG...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: AVVHKVRPREAGFVPHRAAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CCA 90 bp CCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PFGQRLRAQTGWGCRPQGAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp GAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGTCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: ESTDWVGLSSTRSGLGRQSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...CTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAAGAGCACAGACTGGGTaGGGCTGTCGTCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRRAQTG*GCRPQG
Trigger: ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCT...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CCA 90 bp TCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCTTGCAGGCTGGGGTTTaGAGAATGAAAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SSRRAVSRSPHSGFLHLSLQAGV*RMKGHP
Trigger: GGGGTGCCCTTTCATTCTCCAAACCCCAGCCTGCAA...GCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR GCA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEYCRST*KMGSLF
Trigger: GAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTA...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564039.1
ENST00000568077.5
CDS-3UTR GCA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCCGGCAGCAGGACATaGTTTATTCTGAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRAGSRT*FILSRL
Trigger: CAGCCTGCTCAGAATAAAGCATGTCCTGCTGCCGGC...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338401.8
ENST00000614890.4
CDS-3UTR CCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGAAGTCCACGTTGCTCTaGGGGGAGATCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQKSTLL*GEIFPL
Trigger: CAATGGGAAGATCTCCCCCCAGAGCAACGTGGACTT...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CCA 90 bp CCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PRSSRRAVSRSPHSGFLHAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...ATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp CCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATTCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: PRSSRRAVSRSPHSGFLHSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...ATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp TCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCATCTTGCAGGCTGGGGTTTaGAGAATGAAAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SRRAVSRSPHSGFLHLSILQAGV*RMKGHP
Trigger: GGGGTGCCCTTTCATTCTCCAAACCCCAGCCTGCAA...GATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564039.1
CDS-3UTR CCA 90 bp TTCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCGACAGACTTGCAGGCTaGGGTTTGGAGAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: FPGPPGGLCPEAPILGSCDRLAG*GLENER
Trigger: CCTTTCATTCTCCAAACCCCAGCCTGCAAGTCTGTC...GCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CCA 90 bp CAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCATCAGATTTCCCAGAGAGCCTaGGACAGACTTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QEGCVPKPPFWVPASEHQISQRA*DRLAGW
Trigger: CCAGCCTGCAAGTCTGTCCCAGGCTCTCTGGGAAAT...CTGATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564039.1
CDS-3UTR CCA 90 bp GTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCTCTCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VFPEDQAFVVGWHVHHPLTLVRP*ACVVAA
Trigger: CGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGT...GAGAGGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp CATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCAGTCAGGCATTTGTTGTTaGCTGGCATGTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: HVHHPLQEQATGLSQVLQSGICC*LACPPS
Trigger: GGATGGTGGACATGCCAGCCAACAACAAATGCCTGA...CTGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR GCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSSTSDG*HSARGK
Trigger: CTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGA...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSAGPSR*SGPGLA
Trigger: CGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCCCAGGAGCAGGCCACTaGCCTTTCCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSPGAGH*PFPGPP
Trigger: TGGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGG...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR GCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCGAGCAGGTGTCCTGCTaGTCTGAAGAGCCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSEQVSC*SEEPLR
Trigger: ACGGAGGGGCTCTTCAGAGCAGCAGGACACCTGCTC...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp TTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCTCTCCAGATTTCCCAGAGAGCCTaGGACAGACTTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPEDQAFVVGWHVHHPLQISQRA*DRLAGW
Trigger: CCAGCCTGCAAGTCTGTCCCAGGCTCTCTGGGAAAT...CTGGAGAGGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CCA 90 bp GTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCTCTCCCGAAGCCCCCATTCTaGGTTCCTGCATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VFPEDQAFVVGWHVHHPLPKPPF*VPASEH
Trigger: ATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGG...GAGAGGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCCCGAAGCCCCCATTCTaGGTTCCTGCATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSPKPPF*VPASEH
Trigger: ATGCTCAGATGCAGGAACCCAGAATGGGGGCTTCGG...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CCA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCGCATTTGTTGTTGGCTaGCATGTCCACCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSFSGRSGICCWLACPPSAFVVG*HVHHPL
Trigger: GAGAGGATGGTGGACATGCCAGCCAACAACAAATGC...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS GCA 90 bp GGCTGCCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCCACCTCGAGGACGCGGACGCCACGC +
Preference number: 5 (lower is better)
Translates to: GCHSARGKARAKCAA*WPEPEATSRTRTPR
Trigger: GCGTGGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 90 bp CGACGGCTGCCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGAGGCCACCTCGAGGACGCGGACGCC +
Preference number: 5 (lower is better)
Translates to: RRLPLGQGEGPREVR*VLAGARGHLEDADA
Trigger: GGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 90 bp CGGGGGCCGCACCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: RGPHLSRQRWSTSDG*HSARGKARAKCAAC
Trigger: GCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGTGCGGCCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 90 bp TGCCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACCTCGAGGACGCGGACGCCACGCTGG +
Preference number: 5 (lower is better)
Translates to: CHSARGKARAKCAAC*PEPEATSRTRTPRW
Trigger: CCAGCGTGGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 90 bp GTGGCCGCGATGCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: VAAMLSRQRWSTSDG*HSARGKARAKCAAC
Trigger: GCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGCATCGCGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 90 bp TCTGAAGAGCCCCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: SEEPLSRQRWSTSDG*HSARGKARAKCAAC
Trigger: GCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGGGCTCTTCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397664.8
ENST00000564039.1
ENST00000568077.5
CDS GCA 90 bp ACGCGGACGCCACGCTGGGCCGGATCCAGGTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTCCGCTCCGCGGCCGCCGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: TRTPRWAGSRYCRST*KMGSLFRSAAAATS
Trigger: GCTGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS GCA 90 bp CATTCTGGGTTCCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGC +
Preference number: 5 (lower is better)
Translates to: HSGFLSRQRWSTSDG*HSARGKARAKCAAC
Trigger: GCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGAACCCAGAATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338401.8
CDS CCA 90 bp CGCCACGCTGGGCCGGATCCAGGTACTGCCGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCGCGGCCGCCGCCACCAGCATCGCGG +
Preference number: 5 (lower is better)
Translates to: RHAGPDPGTAAARAR*DPCSAPRPPPPASR
Trigger: CCGCGATGCTGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CCA 90 bp TGCTGGCCGGAGCCCGAGGCCACCTCGAGGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGCCGCAGCACGTGCAAGATGGGATCC +
Preference number: 5 (lower is better)
Translates to: CWPEPEATSRTRTPR*AGSRYCRSTCKMGS
Trigger: GGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CCA 90 bp GGGCTTGCGTGGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTaGGGGCCGAGTCCTGTGCACCCGCCTTTCCGACGCCCCCACAGA +
Preference number: 5 (lower is better)
Translates to: GLAWWPRCCRRRTLG*GPSPVHPPFRRPHR
Trigger: TCTGTGGGGGCGTCGGAAAGGCGGGTGCACAGGACTCGGCCCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 90 bp CCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: PGVAGPSRWSGPGLA*WPRCCRRRTLGWGP
Trigger: CGGCCCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS-3UTR CAA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCAGGTCAGGCCCTGGGCTaGCGTGGTGGCCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPGQALG*RGGRDA
Trigger: AGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACC...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS GCA 90 bp GCCACCTCGAGGACGCGGACGCCACGCTGGGCCGGATCCAGGTACTaGCGCAGCACGTGCAAGATGGGATCCTTGTTCCGCTCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: ATSRTRTPRWAGSRY*RSTCKMGSLFRSAA
Trigger: GGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGTCCTCGAGGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000564039.1
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CCA 90 bp GCTCCCAGCCCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATGCTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: APSPTSRPGVAGPSR*SGPGLAWWPRCCPG
Trigger: GCCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGGCTGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CCA 90 bp GGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTGCGTGGTaGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTGGGGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: GVAGPSRWSGPGLAW*PRCCRRRTLGWGPS
Trigger: ACTCGGCCCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 90 bp GCTCCCAGCCCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: APSPTSRPGVAGPSR*SGPGLAWWPRCCRR
Trigger: CCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGGCTGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS-3UTR CAA 90 bp GAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGGGTCAGGCCCTGGGCTaGCGTGGTGGCCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: EHRLGGAVVHKVRPREAGGQALG*RGGRDA
Trigger: AGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACC...CCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS GCA 90 bp ACGTCCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TSRCSGAFTLVRPWA*VVAAMLQEANAWVG
Trigger: CCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 90 bp CACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCGATGCTGTCCAGGCAGCGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: HVTSRCSGAFTLVRP*ACVVAAMLSRQRWS
Trigger: GGACCAGCGCTGCCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS-3UTR CAA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: WALRPAAESTDWVGLSSTSGAFT*VRPWAC
Trigger: GCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCT...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS CCA 90 bp CACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGG +
Preference number: 5 (lower is better)
Translates to: HVTSRCSGAFTLVRP*ACVVAAMLQEANAW
Trigger: CCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS-3UTR CAA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGCKMGS*FRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCA...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CAA 90 bp TGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACATGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: WALRPAAESTDWVGLSSTCKMGS*FRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCA...TGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp CCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATGGTCAGGCCCTGGGCTaGCGTGGTGGCCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: PRSSRRAVSRSPHSGFLHGQALG*RGGRDA
Trigger: AGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACC...ATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CAA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSSGAFT*VRPWAC
Trigger: GCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCT...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp TCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: STRSGLGRQGSCLTEPPASGAFT*VRPWAC
Trigger: GCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCT...TGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CAA 90 bp CAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTAGCAGGGCCCTGGGTTaGAGCAGGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: QAGPFGQRLRAQTGWGCRSRALG*SRCPAA
Trigger: AGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGCT...ACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397664.8
ENST00000397666.6
CDS-3UTR CAA 90 bp ACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TDWVGLSSTRSGLGRQGSCKMGS*FRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCA...CGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp CACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: HRLGGAVVHKVRPREAGFCKMGS*FRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCA...GAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCAAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPASGAFT*VRPWAC
Trigger: GCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCT...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CAA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGGTCAGGCCCTGGGCTaGCGTGGTGGCCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRGQALG*RGGRDA
Trigger: AGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACC...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCAGCAGGGCCCTGGGTTaGAGCAGGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSSRALG*SRCPAA
Trigger: AGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGCT...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397664.8
ENST00000397666.6
CDS-3UTR CAA 90 bp GCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACTGACATGGGCCATGTaGATGCAGAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGPFGQRLRAQTGWGCRPLTWAM*MQSNRS
Trigger: GGACCTGTTGCTCTGCATCAACATGGCCCATGTCAG...TGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRLTWAM*MQSNRS
Trigger: GGACCTGTTGCTCTGCATCAACATGGCCCATGTCAG...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGAGCAGGGCCCTGGGTTaGAGCAGGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VLQEGCVPKPPFWVPASESRALG*SRCPAA
Trigger: AGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGCT...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CAA 90 bp TGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCAGCAGGGCCCTGGGTTaGAGCAGGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: WHVHHPLQEQATGLSQVLSRALG*SRCPAA
Trigger: AGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGCT...GAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456420.6
ENST00000564039.1
ENST00000568077.5
CDS-3UTR CAA 90 bp GCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: AGWALRPAAESTDWVGLSKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...CGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCCAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp CGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: RPAAESTDWVGLSSTRSGRKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...GCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp TTCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCGAGCCTGGGACAGACTaGCAGGCTGGGGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: FPGPPGGLCPEAPILGSCEPGTD*QAGVWR
Trigger: TCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCTC...GCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CAA 90 bp GCTGGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCGAGCCTGGGACAGACTaGCAGGCTGGGGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGMSTILSRSRPLAFPRSEPGTD*QAGVWR
Trigger: TCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCTC...GGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS-3UTR CAA 90 bp CACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: HRLGGAVVHKVRPREAGFLTWAM*MQSNRS
Trigger: GGACCTGTTGCTCTGCATCAACATGGCCCATGTCAG...GAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301686.13
ENST00000614890.4
CDS-3UTR CAA 90 bp CGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: RPAAESTDWVGLSSTRSGKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...GCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp ACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCTCCGGCAGGGCGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: TRSGLGRQGSCLTEPPAGRKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...CCCTGCCGGAGGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CAA 90 bp GGCATGTCCACCATCCTCTCCAGGAGCAGGCCACTGGCCTTTCCCAGGTCCTCCCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: GMSTILSRSRPLAFPRSSLTWAM*MQSNRS
Trigger: GGACCTGTTGCTCTGCATCAACATGGCCCATGTCAG...GGAGGACCTGGGAAAGGCCAGTGGCCTGCTCCTGGAGAGGATGGTGGACATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456420.6
CDS-3UTR CAA 90 bp GACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: DWVGLSSTRSGLGRQGSCIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...GCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp GCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: ALRPAAESTDWVGLSSTRIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...CCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp GGGCCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: GPFGQRLRAQTGWGCRPQKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...TTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp GTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACACGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: VGLSSTRSGLGRQGSCLTRKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...TGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp CTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCCGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: LRPAAESTDWVGLSSTRSRKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...GGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp GCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCGTGCCTCACAGAGCCCGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: AVVHKVRPREAGFVPHRARKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...GGCTCTGTGAGGCACGAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CAA 90 bp GGTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: GSCLTEPPAGMQVCGGEGIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...TCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CAA 90 bp GTTCGTGCCTCACAGAGCCTCCGGCAGGGATGCAGGTGTGCGGGGGTGAAGGAGATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: VRASQSLRQGCRCAGVKEIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...CTCCTTCACCCCCGCACACCTGCATCCCTGCCGGAGGCTCTGTGAGGCACGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000456420.6
ENST00000568077.5
ENST00000614890.4
CDS-3UTR CAA 90 bp CCCTTCGGCCAGCGGCTGAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: PFGQRLRAQTGWGCRPQGIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...ACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTCAGCCGCTGGCCGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp CACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGGGTTCAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: HRLGGAVVHKVRPREAGFKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...GAACCCTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp GAGAGCACAGACTGGGTGGGGCTGTCGTCCACAAGGTCCGGCCTAGGGAGGCAGAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: ESTDWVGLSSTRSGLGRQKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...CTGCCTCCCTAGGCCGGACCTTGTGGACGACAGCCCCACCCAGTCTGTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000614890.4
CDS-3UTR CAA 90 bp TCCCAGGTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCAAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: SQVLQEGCVPKPPFWVPAKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...TGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGACCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CAA 90 bp TCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGCCGGAAGATCAGGCATTaGTTGTTGGCTGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: SSRRAVSRSPHSGFLHLSRKIRH*LLAGMS
Trigger: GGACATGCCAGCCAACAACAAATGCCTGATCTTCCG...GCTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CAA 90 bp GTCCTCCAGGAGGGCTGTGTCCCGAAGCCCCCATTCTGGGTTCCTGCATCTGAGATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: VLQEGCVPKPPFWVPASEIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...CTCAGATGCAGGAACCCAGAATGGGGGCTTCGGGACACAGCCCTCCTGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CAA 90 bp AGGGGCTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGLVFPEDQAFVVGWHVHCKMGS*FRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCA...GTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568077.5
CDS-3UTR CAA 90 bp CAGCAGGACATGCTTTATTCTGAGCAGGCTGGGCCCTTCGGCCAGCGGCTGAGAATCAGGCATTTGTTGTaGGCTGGCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: QQDMLYSEQAGPFGQRLRIRHLL*AGMSTI
Trigger: GATGGTGGACATGCCAGCCAACAACAAATGCCTGAT...TCTCAGCCGCTGGCCGAAGGGCCCAGCCTGCTCAGAATAAAGCATGTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397666.6
ENST00000614890.4
CDS-3UTR CAA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCAGCAGGGCCCTGGGTTaGAGCAGGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSFSGRSGICCWLACPPSSRALG*SRCPAA
Trigger: AGCAGCAGGACACCTGCTCAAACCCAGGGCCCTGCT...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS-3UTR CAA 90 bp CTTAGTTTTTCCGGAAGATCAGGCATTTGTTGTTGGCTGGCATGTCCACCATCCAAGATCAGGCATTTGTaGTTGGCTGGCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: LSFSGRSGICCWLACPPSKIRHL*LAGMST
Trigger: GGTGGACATGCCAGCCAACAACAAATGCCTGATCTT...GGATGGTGGACATGCCAGCCAACAACAAATGCCTGATCTTCCGGAAAAACTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000568077.5
CDS CCA 72 bp TGGCCGCCCCGGGGGCCGCACCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGCCACTCGGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: WPPRGPHLSRQR*STSDGCHSARG
Trigger: CCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGTGCGGCCCCCGGGGCGGCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS GCA 72 bp TCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTaGTGGCCGGAGCCCGAGGCCACCTCGAGGACGCGG +
Preference number: 6 (lower is better)
Translates to: SARGKARAKCAA*WPEPEATSRTR
Trigger: CCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CCA 72 bp GCCAGGGGGAAGGCCCGCGCGAAGTGCGCTGCGTGCTaGCCGGAGCCCGAGGCCACCTCGAGGACGCGGACG +
Preference number: 6 (lower is better)
Translates to: ARGKARAKCAAC*PEPEATSRTRT
Trigger: CGTCCGCGTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp CCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGCGCTaGGTGCTGGCCGGAGCCCGAGGCCACCTCGAGGAC +
Preference number: 6 (lower is better)
Translates to: PLGQGEGPREVR*VLAGARGHLED
Trigger: GTCCTCGAGGTGGCCTCGGGCTCCGGCCAGCACGCAGCGCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp CCCCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: PLSRQRWSTSDG*HSARGKARAKC
Trigger: GCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397664.8
ENST00000564039.1
ENST00000568077.5
CDS GCA 72 bp CACCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: HLSRQRWSTSDG*HSARGKARAKC
Trigger: GCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 72 bp GCTTGCGTGGTGGCCGCGATGCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGCCACTCGGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: ACVVAAMLSRQR*STSDGCHSARG
Trigger: CCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGCATCGCGGCCACCACGCAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp ATGCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: MLSRQRWSTSDG*HSARGKARAKC
Trigger: GCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp TTCCTGTCCAGGCAGCGCTGGTCCACGTCCGACGGCTaGCACTCGGCCAGGGGGAAGGCCCGCGCGAAGTGC +
Preference number: 6 (lower is better)
Translates to: FLSRQRWSTSDG*HSARGKARAKC
Trigger: GCACTTCGCGCGGGCCTTCCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338401.8
CDS CCA 72 bp GAGCCCGAGGCCACCTCGAGGACGCGGACGCCACGCTaGGCCGGATCCAGGTACTGCCGCAGCACGTGCAAG +
Preference number: 6 (lower is better)
Translates to: EPEATSRTRTPR*AGSRYCRSTCK
Trigger: CTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGGCGTCCGCGTCCTCGAGGTGGCCTCGGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000564039.1
ENST00000565163.5
ENST00000565799.1
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp CGTTGGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATaGTGCAGGAGGCGAACGCTTGGGTGGGGGCCGAGT +
Preference number: 6 (lower is better)
Translates to: RWSGPGLAWWPR*CRRRTLGWGPS
Trigger: ACTCGGCCCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 72 bp GCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGTCCAGGCAGCGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: AGPSRWSGPGLA*WPRCCPGSAGP
Trigger: TGGACCAGCGCTGCCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CCA 72 bp CGAAGCCCCCATTCTGGGTTCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGCCACTCGGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RSPHSGFLSRQR*STSDGCHSARG
Trigger: CCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGAACCCAGAATGGGGGCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338401.8
CDS CCA 72 bp TCCTGCTGCTCTGAAGAGCCCCTGTCCAGGCAGCGCTaGTCCACGTCCGACGGCTGCCACTCGGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SCCSEEPLSRQR*STSDGCHSARG
Trigger: CCCCCTGGCCGAGTGGCAGCCGTCGGACGTGGACCAGCGCTGCCTGGACAGGGGCTCTTCAGAGCAGCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397664.8
ENST00000564039.1
ENST00000568077.5
CDS CCA 72 bp TGGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTaGGGGCCGAGTCCTGTGCACCCGCCTTTCCGACGC +
Preference number: 6 (lower is better)
Translates to: WWPRCCRRRTLG*GPSPVHPPFRR
Trigger: GCGTCGGAAAGGCGGGTGCACAGGACTCGGCCCCCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 72 bp GCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTGCGTaGTGGCCGCGATGCTGCAGGAGGCGAACGCTTGGG +
Preference number: 6 (lower is better)
Translates to: AGPSRWSGPGLA*WPRCCRRRTLG
Trigger: CCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CAA 90 bp TGCTCCCAGCCCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CSQPHVTSRCSGAFT*VRPWACVVAAMLSR
Trigger: CCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGGCTGGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CAA 90 bp TGCTCCCAGCCCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATGCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: CSQPHVTSRCSGAFT*VRPWACVVAAMLQE
Trigger: CTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGGCTGGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS GCA 72 bp CCACGCTGGGCCGGATCCAGGTACTGCCGCAGCACGTaGAAGATGGGATCCTTGTTCCGCTCCGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: PRWAGSRYCRST*KMGSLFRSAAA
Trigger: GGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCAGCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp TGTAGCGGGGCCTTCACGTTGGTCAGGCCCTGGGCTTaGGTGGTGGCCGCGATGCTGTCCAGGCAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: CSGAFTLVRPWA*VVAAMLSRQRW
Trigger: CCAGCGCTGCCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS GCA 72 bp CCCATGCAGGGTGAGTGGTGCCACGGCAGACACCCATaGTGGGCTCCCCACAGACCTCCGTGCAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: PMQGEWCHGRHP*WAPHRPPCSAG
Trigger: CCCTGCGCTGCACGGAGGTCTGTGGGGAGCCCAGCATGGGTGTCTGCCGTGGCACCACTCACCCTGCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448973.6
ENST00000565163.5
ENST00000568830.1
CDS CCA 72 bp GGGCCGGATCCAGGTACTGCCGCAGCACGTGCAAGATaGGATCCTTGTTCCGCTCCGCGGCCGCCGCCACCA +
Preference number: 6 (lower is better)
Translates to: GPDPGTAAARAR*DPCSAPRPPPP
Trigger: TGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CCA 72 bp CCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTTaGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATGC +
Preference number: 6 (lower is better)
Translates to: PTSRPGVAGPSR*SGPGLAWWPRC
Trigger: GCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000565163.5
ENST00000565799.1
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CCA 72 bp GGGCCTTCACGTTGGTCAGGCCCTGGGCTTGCGTGGTaGCCGCGATGCTGCAGGAGGCGAACGCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: GPSRWSGPGLAW*PRCCRRRTLGW
Trigger: CCACCCAAGCGTTCGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CCA 72 bp TCCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCGATGCTGCAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: SRCSGAFTLVRP*ACVVAAMLQEA
Trigger: CGCCTCCTGCAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448973.6
ENST00000565799.1
CDS CAA 72 bp CCCCACGTCACGTCCAGGTGTAGCGGGGCCTTCACGTaGGTCAGGCCCTGGGCTTGCGTGGTGGCCGCGATG +
Preference number: 6 (lower is better)
Translates to: PHVTSRCSGAFT*VRPWACVVAAM
Trigger: CATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGACGTGACGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000448973.6
ENST00000456420.6
ENST00000565163.5
ENST00000565799.1
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CAA 90 bp TGGGCCGGATCCAGGTACTGCCGCAGCACGTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCCGCCACCAGCATCGCGGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: WAGSRYCRSTCKMGS*FRSAAAATSIAAAT
Trigger: TGTTGCTGCCGCGATGCTGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGATCCGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CCA 72 bp TCCAGGTGTAGCGGGGCCTTCACGTTGGTCAGGCCCTaGGCTTGCGTGGTGGCCGCGATGCTGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SRCSGAFTLVRP*ACVVAAMLSRQ
Trigger: CTGCCTGGACAGCATCGCGGCCACCACGCAAGCCCAGGGCCTGACCAACGTGAAGGCCCCGCTACACCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000397665.6
ENST00000397666.6
ENST00000456420.6
ENST00000565163.5
ENST00000568773.1
ENST00000568830.1
ENST00000614890.4
CDS CAA 72 bp TCCAGGTACTGCCGCAGCACGTGCAAGATGGGATCCTaGTTCCGCTCCGCGGCCGCCGCCACCAGCATCGCG +
Preference number: 6 (lower is better)
Translates to: SRYCRSTCKMGS*FRSAAAATSIA
Trigger: CGCGATGCTGGTGGCGGCGGCCGCGGAGCGGAACAAGGATCCCATCTTGCACGTGCTGCGGCAGTACCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301686.13
ENST00000338401.8
ENST00000397664.8
ENST00000397666.6
ENST00000448973.6
ENST00000568077.5
ENST00000568830.1
ENST00000614890.4
CDS CAA 90 bp CTGAAGAGCCCCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGGATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: LKSPSVQRRGLTWAM*MQSNRSSDCGRIPP
Trigger: GGGCGGGATCCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGGGCTCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000456420.6
ENST00000565799.1
ENST00000568773.1
CDS CAA 90 bp TCCCCACAGACCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGGATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SPQTSVQRRGLTWAM*MQSNRSSDCGRIPP
Trigger: GGGCGGGATCCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGTCTGTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000448973.6
ENST00000565163.5
ENST00000568830.1
CDS CAA 72 bp CCCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PSVQRRGLTWAM*MQSNRSSDCGR
Trigger: CCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301686.13
ENST00000397666.6
ENST00000456420.6
ENST00000565799.1
ENST00000568773.1
CDS CAA 72 bp GGCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GSVQRRGLTWAM*MQSNRSSDCGR
Trigger: CCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614890.4
CDS CAA 72 bp TCCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSVQRRGLTWAM*MQSNRSSDCGR
Trigger: CCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397665.6
CDS CAA 72 bp ACCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: TSVQRRGLTWAM*MQSNRSSDCGR
Trigger: CCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000448973.6
ENST00000565163.5
ENST00000568830.1
CDS CAA 90 bp ATTCTGGGTTCCTCCGTGCAGCGCAGGGGGCTGACATGGGCCATGTaGATGCAGAGCAACAGGTCCAGCGACTGTGGCAGGATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: ILGSSVQRRGLTWAM*MQSNRSSDCGRIPP
Trigger: GGGCGGGATCCTGCCACAGTCGCTGGACCTGTTGCTCTGCATCAACATGGCCCATGTCAGCCCCCTGCGCTGCACGGAGGAACCCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397665.6
CDS CCA 72 bp GGTATTTCCCAGAGAGCCTGGGACAGACTTGCAGGCTaGGGTTTGGAGAATGAAAGGGCACCCCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: GISQRAWDRLAG*GLENERAPPPP
Trigger: CGGGGGAGGGGGTGCCCTTTCATTCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCTCTCTGGGAAATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456420.6
ENST00000564039.1
CDS CCA 72 bp GGTATTTCCCAGAGAGCCTGGGACAGACTTGCAGGCTaGGGTTTGGAGAATGAAAGGGCACCCCCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: GISQRAWDRLAG*GLENERAPPPC
Trigger: ACAGGGAGGGGGTGCCCTTTCATTCTCCAAACCCCAGCCTGCAAGTCTGTCCCAGGCTCTCTGGGAAATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448973.6