RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL23 (Homo sapiens)

Ensembl gene IDs: ENSG00000181038

Ensembl transcript IDs: ENST00000341249.11, ENST00000586200.1, ENST00000586738.5, ENST00000586752.5, ENST00000588302.5, ENST00000588563.5, ENST00000588783.5, ENST00000588822.1, ENST00000588964.1, ENST00000589581.1, ENST00000589977.5, ENST00000590964.5, ENST00000591571.5, ENST00000592849.5, ENST00000615984.4

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTA +
Preference number: 1 (lower is better)
Translates to: RQTDLTIFRPTAFSS*SGLLIVCVPGCSSV
Trigger: TACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR GCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: TSKSKANRLDHLQTH*ILKLKWSAHSLCAR
Trigger: CCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR CCA 90 bp AACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGAT +
Preference number: 1 (lower is better)
Translates to: NRLDHLQTHCILKLK*SAHSLCARLLISID
Trigger: ATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR GCA 90 bp TACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTaGAAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: YCPRTGCRYNSETVL*KGNDQHFNCMSSWK
Trigger: CTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR GCA 90 bp AATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTG +
Preference number: 1 (lower is better)
Translates to: NDQHFNCMSSWKGRF*YIFFVCIKRLKRNV
Trigger: CACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR CCA 90 bp GTCCTTTGCAAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTATATCTTCTTTGTCTGCATCAAAAGA +
Preference number: 1 (lower is better)
Translates to: VLCKGNDQHFNCMSS*KGRFCYIFFVCIKR
Trigger: TCTTTTGATGCAGACAAAGAAGATATAGCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR CAA 90 bp CTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAG +
Preference number: 2 (lower is better)
Translates to: LQTHCILKLKWSAHS*CARLLISIDTVPEQ
Trigger: CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR CAA 90 bp TGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATA +
Preference number: 2 (lower is better)
Translates to: CILKLKWSAHSLCAR*LISIDTVPEQVVGI
Trigger: TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR TCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 2 (lower is better)
Translates to: TSKSKANRLDHLQTHCILVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR TCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAAGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 2 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKEVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR GCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 2 (lower is better)
Translates to: TSKSKANRLDHLQTHCILVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR GCA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 2 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CCA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 2 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR TCA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGCCTTTGCAAAGGAAATaGCCAGCATTTCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQPLQRK*PAFQLY
Trigger: ATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGG...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CCA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTAT +
Preference number: 2 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQNCMSS*KGRFCY
Trigger: ATAGCAGAATCTACCCTTCCAGGAAGACATACAGTT...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR GCA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CAA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 3 (lower is better)
Translates to: KANRLDHLQTHCILKLKWGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR CAA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACT +
Preference number: 3 (lower is better)
Translates to: KANRLDHLQTHCILKLKWSLCAR*LISIDT
Trigger: AGTATCAATACTGATGAGCAACCTGGCACACAAACT...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR CAA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 3 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CAA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 3 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR GCA 72 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTG +
Preference number: 3 (lower is better)
Translates to: SKANRLDHLQTH*ILKLKWSAHSL
Trigger: CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
3UTR-3UTR CAA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 3 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CAA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 3 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CAA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAATCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 3 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKESAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR-3UTR CAA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGTCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 3 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR GCA 72 bp CATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGCATCAAAAGACTCAAG +
Preference number: 3 (lower is better)
Translates to: HFNCMSSWKGRF*YIFFVCIKRLK
Trigger: CTTGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
3UTR GCA 72 bp AGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTaGAAAGGAAATGACCAGCATTTCAACTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: RTGCRYNSETVL*KGNDQHFNCMS
Trigger: AGACATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCATCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: WSAHSLCARLLISIDTVPSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...TGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGTCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGCCGACATCCGCTCCTaGCCTCAGGCGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQADIRS*PQAPPG
Trigger: GCCAGGAGGCGCCTGAGGTCAGGAGCGGATGTCGGC...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS-3UTR TCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGAAGCTGCGCAGCTaGGCGTCCGCACCCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNRKLRS*ASAPPV
Trigger: GACCGGGGGTGCGGACGCTCAGCTGCGCAGCTTCCT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTATCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGPPGGC*CTHLRD
Trigger: GTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGG...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGAGGACCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWRTCGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTCCT...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGTCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGCTGCTGCACGCACCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCAAART*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGC...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVPGGCC*THLRDV
Trigger: CACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGG...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTACCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVPGGCC*THLRDV
Trigger: CACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGG...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR GCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVPPGGC*CTHLRD
Trigger: GTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGG...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR CCA 90 bp TGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCATCACACGCGCAGAACTaGCAACGGGCGGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: WSAHSLCARLLISIDTVPSHAQN*QRAAGA
Trigger: CGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTGTGA...TGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTCACACGCGCAGAACTaGCAACGGGCGGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKSHAQN*QRAAGA
Trigger: CGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTGTGA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGAGGACCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKRTCGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTCCT...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR CCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGCCAATCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLPICGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGATTGG...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588302.5
ENST00000590964.5
CDS-3UTR CCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTCCAATCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSPICGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGATTGG...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588302.5
ENST00000590964.5
CDS-3UTR CCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGCGCACCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLRTCGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCG...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR CCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTACGCACCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVRTCGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCG...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR CCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGACCTCAGGCGCCTCCTaGCGGGTGCTGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRTSGAS*RVLLHA
Trigger: TGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR GCA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGTCCGGGCTGCCAGACTaGGCGAGCGGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQSGLPD*ASGKPR
Trigger: CCGCGGCTTCCCGCTCGCGCAGTCTGGCAGCCCGGA...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTGGAGATGCAGGACCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSWRCRT*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGGTCCTGCATCTCCA...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGCTGCTGCACGCACCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVAAART*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGC...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKPGGCC*THLRDV
Trigger: CACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGG...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCPPGGC*CTHLRD
Trigger: GTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGG...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586738.5
CDS-3UTR CCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTTCACACGCGCAGAACTaGCAACGGGCGGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVSHAQN*QRAAGA
Trigger: CGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTGTGA...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAACGCACCTGCGGGACGTaGACCTCCAGGACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKERTCGT*TSRTAP
Trigger: CGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCG...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586738.5
CDS-3UTR CCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGGCACACGCGCAGAACTaGCAACGGGCGGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKAHAQN*QRAAGA
Trigger: CGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTGTGC...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586738.5
CDS-3UTR CCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGACCTCAGGCGCCTCCTaGCGGGTGCTGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLTSGAS*RVLLHA
Trigger: TGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGT...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588822.1
ENST00000615984.4
CDS-3UTR TCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGCGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKRGRST*RQEGES
Trigger: GCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACG...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTCGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGRGRST*RQEGES
Trigger: GCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACG...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLITLPR*ERRKPG
Trigger: TCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTAT...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWCPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGACTCCAGCTCCAATCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWTPAPI*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGATTGGAGCTGGAGT...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588302.5
ENST00000590964.5
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGGCTGCTGCACGCACCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKAAART*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGC...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTCGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVRGRST*RQEGES
Trigger: GCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACG...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKITLPR*ERRKPG
Trigger: TCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTAT...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRCPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKCPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAGAGAATCGAAAGCGCTaGGCCCGGACCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPEENRKR*ARTPCP
Trigger: AGGACAGGGGGTCCGGGCCCAGCGCTTTCGATTCTC...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKRGRST*RQEGES
Trigger: GCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACG...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPEITLPR*ERRKPG
Trigger: TCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTAT...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVITLPR*ERRKPG
Trigger: TCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTAT...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVITLPR*ERRKPG
Trigger: TCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTAT...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341249.11
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAATGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPECPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATATGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGICPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAACTCCAGCTCCAATCTaGGGGACGTGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGITPAPI*GTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGATTGGAGCTGGAGT...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588302.5
ENST00000590964.5
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTACCTAAAGCAGGAAGCTaGGCAGCTGAGCGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVPKAGS*AAERPH
Trigger: GTGCGGACGCTCAGCTGCGCAGCTTCCTGCTTTAGG...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS-3UTR CCA 90 bp TGCAAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCGAGAATCGAAAGCGCTaGGCCCGGACCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CKGNDQHFNCMSSWKGRFENRKR*ARTPCP
Trigger: AGGACAGGGGGTCCGGGCCCAGCGCTTTCGATTCTC...GAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp AGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGCGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RLLISIDTVPEQVVGIIQRGRST*RQEGES
Trigger: GCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACG...CTGAATTATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588783.5
CDS-3UTR TCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGGCAGAGATCTTCTGTaGAACCAAAGGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSGRDLL*NQRYWA
Trigger: GGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGTGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKCPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAATGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKECPRKS*SPSRAS
Trigger: CGACGCCCTACTGGGCGAGCACGATTTCCGAGGACA...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACATTCCATACTGGAGATaGAGGACCTGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNIPYWR*RTCGTW
Trigger: CCACGTCCCGCAGGTCCTGCATCTCCAGTATGGAAT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR CCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTACAATACGCGCAGAACTaGCAACGGGCGGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLQYAQN*QRAAGA
Trigger: CGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTATTG...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGCTCCAATCTCTAAGATaGCCTTGCCTGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLLQSLR*PCLAEI
Trigger: GATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAG...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTCTCCAATCTCTAAGATaGCCTTGCCTGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSLQSLR*PCLAEI
Trigger: GATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAG...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGIGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATACCTCAGGCGCCTCCTaGCGGGTGCTGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHTSGAS*RVLLHA
Trigger: TGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGT...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586738.5
CDS-3UTR TCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCGGCAGAGATCTTCTGTaGAACCAAAGGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVGRDLL*NQRYWA
Trigger: GGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCC...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCATTCCATACTGGAGATaGAGGACCTGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILIPYWR*RTCGTW
Trigger: CCACGTCCCGCAGGTCCTGCATCTCCAGTATGGAAT...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR GCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGATTCCATACTGGAGATaGAGGACCTCAGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKIPYWR*RTSGAS
Trigger: GGAGGCGCCTGAGGTCCTGCATCTCCAGTATGGAAT...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCATTCCATACTGGAGATaGAGGACCTCAGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILIPYWR*RTSGAS
Trigger: GGAGGCGCCTGAGGTCCTGCATCTCCAGTATGGAAT...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTACATACATTCCATACTaGAGATGCAGGACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCTYIPY*RCRTCG
Trigger: CCCGCAGGTCCTGCATCTCCAGTATGGAATGTATGT...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR TCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTAGATCCCAAGATATATaGCCCCATGTTAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSRSQDI*PHVSPT
Trigger: GGTAGGACTAACATGGGGTCATATATCTTGGGATCT...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTCTCTAAGATGGCCTTaGCTGGCAGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRSLRWP*LAEIFC
Trigger: ACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGA...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCACATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WSAHSLCARLLISIDTVPHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...TGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGCATATCCGACGTTTTTaGTCCGGGGGTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQHIRRF*SGGQPK
Trigger: TTTAGGTTGACCCCCGGAGCAAAAACGTCGGATATG...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS-3UTR CCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCTCCAATCTCTAAGATaGCCTTGCCTGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVLQSLR*PCLAEI
Trigger: GATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAG...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGCTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWLLHHI*QPKFLE
Trigger: TTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAG...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGACATACATTCCATACTaGAGATGCAGGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQTYIPY*RCRTSG
Trigger: GCCTGAGGTCCTGCATCTCCAGTATGGAATGTATGT...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTACATACATTCCATACTaGAGATGCAGGACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGTYIPY*RCRTSG
Trigger: GCCTGAGGTCCTGCATCTCCAGTATGGAATGTATGT...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTAGATCCCAAGATATATaGCCCCATGTTAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCRSQDI*PHVSPT
Trigger: GGTAGGACTAACATGGGGTCATATATCTTGGGATCT...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGAGATCCCAAGATATATaGCCCCATGTTAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRRSQDI*PHVSPT
Trigger: GGTAGGACTAACATGGGGTCATATATCTTGGGATCT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: WSAHSLCARLLISIDTVPVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...TGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQTAFSS*SGLLIV
Trigger: AACTATGAGCAGACCACTTCAGCTTGAGAATGCAGT...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCTAFSS*SGLLIV
Trigger: AACTATGAGCAGACCACTTCAGCTTGAGAATGCAGT...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRTAFSS*SGLLIV
Trigger: AACTATGAGCAGACCACTTCAGCTTGAGAATGCAGT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTATCTCTAAGATGGCCTTaGCTGGCAGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVSLRWP*LAEIFC
Trigger: ACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGA...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTTCTCTAAGATGGCCTTaGCTGGCAGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVSLRWP*LAEIFC
Trigger: ACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGA...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCTCTCTAAGATGGCCTTaGCTGGCAGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVSLRWP*LAEIFC
Trigger: ACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGA...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HSLCARLLISIDTVPEQVFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCACATACATTCCATACTaGAGATGCAGGACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILTYIPY*RCRTCG
Trigger: CCCGCAGGTCCTGCATCTCCAGTATGGAATGTATGT...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS-3UTR CCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAACTCCAATCTCTAAGATaGCCTTGCCTGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKELQSLR*PCLAEI
Trigger: GATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAG...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586738.5
ENST00000588783.5
CDS-3UTR CCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACCTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNLLHHI*QPKFLE
Trigger: TTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAG...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGCTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQLLHHI*QPKFLE
Trigger: TTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAG...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
3UTR CAA 72 bp CACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATCAGTATTGATACTGTC +
Preference number: 4 (lower is better)
Translates to: HCILKLKWSAHS*CARLLISIDTV
Trigger: GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGAGATCCCAAGATATATaGCCCCATGTTAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLRSQDI*PHVSPT
Trigger: GGTAGGACTAACATGGGGTCATATATCTTGGGATCT...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPEVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAAATGACTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: PRTGCRYNSETVLCKGNDFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...GTCATTTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVLLHHI*QPKFLE
Trigger: TTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAG...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: DHLQTHCILKLKWSAHSLILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...CAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTCCTTTGCAAAGGAAATaGCCAGCATTTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: LCARLLISIDTVPEQVVGPLQRK*PAFQLY
Trigger: ATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGG...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR TCA 90 bp CCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAAATGACACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: PRTGCRYNSETVLCKGNDTAFSS*SGLLIV
Trigger: AACTATGAGCAGACCACTTCAGCTTGAGAATGCAGT...GTCATTTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR TCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGACTGCATTCTCAAGCTaGAGTGGTCTGCTCATAGTT +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKTAFSS*SGLLIV
Trigger: AACTATGAGCAGACCACTTCAGCTTGAGAATGCAGT...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGIVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHGSQNS*KAHSSS
Trigger: GGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCC...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAAATGACTACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: PRTGCRYNSETVLCKGNDYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...GTCATTTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: AHSLCARLLISIDTVPEQNCMSS*KGRFCY
Trigger: ATAGCAGAATCTACCCTTCCAGGAAGACATACAGTT...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRNCMSS*KGRFCY
Trigger: ATAGCAGAATCTACCCTTCCAGGAAGACATACAGTT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCTTTGCAAAGGAAATaGCCAGCATTTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVPLQRK*PAFQLY
Trigger: ATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGG...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGCCTTTGCAAAGGAAATaGCCAGCATTTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLPLQRK*PAFQLY
Trigger: ATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGG...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTACCTTTGCAAAGGAAATaGCCAGCATTTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVPLQRK*PAFQLY
Trigger: ATACAGTTGAAATGCTGGTCATTTCCTTTGCAAAGG...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATATCCCATTTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SLSASKDSRGMWTHFISHFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTATTCATTTGGCAGCTTTaGCGACAGACTTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLFIWQL*RQTSRQ
Trigger: CTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAA...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR GCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAGTTAGTCCTACCACCTaGAGATGTGGCAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLVSPTT*RCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAAC...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR GCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAATGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPEWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TGCAAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: CKGNDQHFNCMSSWKGRFVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...GAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: KANRLDHLQTHCILKLKWVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPETTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGITTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGIDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVNCMSS*KGRFCY
Trigger: ATAGCAGAATCTACCCTTCCAGGAAGACATACAGTT...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGIILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp TCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATATCCCATGTTGCTCATCAGTATTaGTACTGTCCCAGAACAGGT +
Preference number: 4 (lower is better)
Translates to: SLSASKDSRGMWTHFISHVAHQY*YCPRTG
Trigger: ACCTGTTCTGGGACAGTATCAATACTGATGAGCAAC...ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SKANRLDHLQTHCILKLKYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAATGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKEWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGTGGAAGGGTAGATTCTaGTATATCTTCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKWKGRF*YIFFVC
Trigger: GCAGACAAAGAAGATATAGCAGAATCTACCCTTCCA...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TGCAAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: CKGNDQHFNCMSSWKGRFDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...GAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAACTGTATGTCTTCCTaGAAGGGTAGATTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: TSKSKANRLDHLQTHCILNCMSS*KGRFCY
Trigger: ATAGCAGAATCTACCCTTCCAGGAAGACATACAGTT...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCATTCTCAAGCTGAAGTaGTCTGCTCATAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCILKLK*SAHSLC
Trigger: ACACAAACTATGAGCAGACCACTTCAGCTTGAGAAT...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATATATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CARLLISIDTVPEQVVGIYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR GCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATCATCTTCAGACCCACTaGATTCTCAAGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHHLQTH*ILKLKW
Trigger: CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: SLCARLLISIDTVPEQVVVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: KWSAHSLCARLLISIDTVVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: SAHSLCARLLISIDTVPEVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR TCA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAAAGATCCCAAGATATATaGCCCCATGTTAGTCCTACC +
Preference number: 4 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKRSQDI*PHVSPT
Trigger: GGTAGGACTAACATGGGGTCATATATCTTGGGATCT...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR GCA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR GCA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGTATATCTTCTTTGTCTaGATCAAAAGACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SKSKANRLDHLQTHCILKYIFFV*IKRLKR
Trigger: CCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CCA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKLLHHI*QPKFLE
Trigger: TTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAG...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CCA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAATACCACCTGCAGATGTaGCAGGTTATTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKYHLQM*QVIHLA
Trigger: TGCCAAATGAATAACCTGCCACATCTGCAGGTGGTA...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CCA 90 bp ACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGAAGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: TVPEQVVGIIQRLSFAKEVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...TTCCTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CCA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAGACTCAAGAGGAATGTaGACACATTTCATATCCCAT +
Preference number: 4 (lower is better)
Translates to: HISYPICRVKLQVTSQHLDSRGM*THFISH
Trigger: ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTC...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR GCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATGTTTGTGTGCCAGGTTaGTCATCAGTATTGATACTG +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHVCVPG*SSVLIL
Trigger: CAGTATCAATACTGATGAGCAACCTGGCACACAAAC...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATACCACAATTGGACCTTaGGATTCTTGTGCATCAAAA +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHTTIGP*DSCASK
Trigger: TTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGT...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CCA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAAGTCTTCAAAATCTTCTaGTTCAAAGAACACATCAGA +
Preference number: 4 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKVFKIF*FKEHIR
Trigger: TCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGAC...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS TCA 90 bp CCCCGGTCCCTCAGGAACCCAGCCAAGTCAGCCGACATCCGCTCCTaGCCTCAGGCGCCTCCTGGCGGGTGCTGCTGCACGCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: PRSLRNPAKSADIRS*PQAPPGGCCCTHLR
Trigger: CCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCAGGAGCGGATGTCGGCTGACTTGGCTGGGTTCCTGAGGGACCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS GCA 90 bp GGCTCACTCCAGCTCCAATCTCAGGCGCCTCCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTGGACCTCCAGGACAGCCCCGTCGGC +
Preference number: 5 (lower is better)
Translates to: GSLQLQSQAPPGGCC*THLRDVDLQDSPVG
Trigger: GCCGACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGATTGGAGCTGGAGTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586752.5
CDS GCA 90 bp CATACTGGAGATGCAGGACCTCAGGCGCCTCCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTGGACCTCCAGGACAGCCCCGTCGGC +
Preference number: 5 (lower is better)
Translates to: HTGDAGPQAPPGGCC*THLRDVDLQDSPVG
Trigger: GCCGACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCCTGCATCTCCAGTATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 90 bp CCCAGCCAAGTCAGCCGACATCCGCTCCTGACCTCAGGCGCCTCCTaGCGGGTGCTGCTGCACGCACCTGCGGGACGTGGACCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSQVSRHPLLTSGAS*RVLLHAPAGRGPPG
Trigger: TCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCAGGAGCGGATGTCGGCTGACTTGGCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS GCA 90 bp GAAGGCTCACTCCAGCTCCAATCTCAGGCGCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGACGTGGACCTCCAGGACAGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: EGSLQLQSQAPPGGC*CTHLRDVDLQDSPV
Trigger: GACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGATTGGAGCTGGAGTGAGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586752.5
CDS GCA 90 bp TTCCATACTGGAGATGCAGGACCTCAGGCGCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGACGTGGACCTCCAGGACAGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: FHTGDAGPQAPPGGC*CTHLRDVDLQDSPV
Trigger: GACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCCTGCATCTCCAGTATGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000592849.5
ENST00000615984.4
CDS TCA 90 bp CAGACTGCGCGAGCGGGAAGCCGCGGGCCACGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGCCCAGATCTGGTGATAACCCTGCCG +
Preference number: 5 (lower is better)
Translates to: QTARAGSRGPRGRST*RQEGESPDLVITLP
Trigger: CGGCAGGGTTATCACCAGATCTGGGCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACGTGGCCCGCGGCTTCCCGCTCGCGCAGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586752.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 90 bp CGGCAAGAAGGGGAAAGCCCAGATCTGGTGATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGAGCAAGGCGAAAGAGACTCACACGC +
Preference number: 5 (lower is better)
Translates to: RQEGESPDLVITLPR*ERRKPGARRKRLTR
Trigger: GCGTGTGAGTCTCTTTCGCCTTGCTCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTATCACCAGATCTGGGCTTTCCCCTTCTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586752.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS TCA 90 bp CCAGCTCCAATCTCTAAGATGGCCTTGCCTGGCAGAGATCTTCTGTaGAACCAAAGGTACTGGGCCAGGACCACAGCACAGGGCCAAACA +
Preference number: 5 (lower is better)
Translates to: PAPISKMALPGRDLL*NQRYWARTTAQGQT
Trigger: TGTTTGGCCCTGTGCTGTGGTCCTGGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588563.5
ENST00000588783.5
ENST00000589581.1
ENST00000589977.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 90 bp GAGGCAGTTCTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTCCAATACGCG +
Preference number: 5 (lower is better)
Translates to: EAVLSCLTVLLLHHI*QPKFLEGSLQLQYA
Trigger: CGCGTATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAGAACTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS CCA 90 bp GAGGCAGTTCTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTCCAATCTCAG +
Preference number: 5 (lower is better)
Translates to: EAVLSCLTVLLLHHI*QPKFLEGSLQLQSQ
Trigger: CTGAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAGAACTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586752.5
CDS CCA 90 bp GAGGCAGTTCTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTCCAATCTCTA +
Preference number: 5 (lower is better)
Translates to: EAVLSCLTVLLLHHI*QPKFLEGSLQLQSL
Trigger: TAGAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAGAACTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588563.5
ENST00000588783.5
ENST00000589581.1
ENST00000589977.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 90 bp GAGGCAGTTCTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTCCAATTGAGA +
Preference number: 5 (lower is better)
Translates to: EAVLSCLTVLLLHHI*QPKFLEGSLQLQLR
Trigger: TCTCAATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAGAACTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS-3UTR CAA 90 bp AAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTGGCAGGTTATTCATTaGGCAGCTTTGCCGACAGAC +
Preference number: 5 (lower is better)
Translates to: KANRLDHLQTHCILKLKWWQVIH*AALPTD
Trigger: GTCTGTCGGCAAAGCTGCCAAATGAATAACCTGCCA...CCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS CCA 90 bp GAGGCAGTTCTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTCCAATCTAAT +
Preference number: 5 (lower is better)
Translates to: EAVLSCLTVLLLHHI*QPKFLEGSLQLQSN
Trigger: ATTAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAGAACTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588964.1
CDS-3UTR CAA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTATCTCTAAGATGGCCTaGCCTGGCAGAGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCISKMA*PGRDLL
Trigger: CAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGAT...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGATCTCTAAGATGGCCTaGCCTGGCAGAGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRISKMA*PGRDLL
Trigger: CAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGAT...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACATCTCTAAGATGGCCTaGCCTGGCAGAGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNISKMA*PGRDLL
Trigger: CAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGAT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SKANRLDHLQTHCILKLKWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAAATCTCTAAGATGGCCTaGCCTGGCAGAGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: SAHSLCARLLISIDTVPEISKMA*PGRDLL
Trigger: CAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGAT...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588783.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: LCARLLISIDTVPEQVVGGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: KWSAHSLCARLLISIDTVWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: AHSLCARLLISIDTVPEQLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: LCARLLISIDTVPEQVVGLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS TCA 90 bp AGGATAATATCTTGTGGTGGTAGAGCCAGAAGATCCCAAGATATATaGCCCCATGTTAGTCCTACCACCTGCAGATGTGGCAGGTTATTC +
Preference number: 5 (lower is better)
Translates to: RIISCGGRARRSQDI*PHVSPTTCRCGRLF
Trigger: GAATAACCTGCCACATCTGCAGGTGGTAGGACTAACATGGGGTCATATATCTTGGGATCTTCTGGCTCTACCACCACAAGATATTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588563.5
ENST00000588783.5
ENST00000588822.1
ENST00000588964.1
ENST00000589581.1
ENST00000589977.5
ENST00000590964.5
ENST00000591571.5
ENST00000592849.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: SKANRLDHLQTHCILKLKDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...CTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: AHSLCARLLISIDTVPEQDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTGTCAGCACTCCTAACTaGATAAGTAGACCACAATTG +
Preference number: 5 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSVSTPN*ISRPQL
Trigger: CAATTGTGGTCTACTTATCAAGTTAGGAGTGCTGAC...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341249.11
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: CARLLISIDTVPEQVVGIGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: HSLCARLLISIDTVPEQVGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTTGACCATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACT +
Preference number: 5 (lower is better)
Translates to: LDHLQTHCILKLKWSAHSSLCAR*LISIDT
Trigger: AGTATCAATACTGATGAGCAACCTGGCACACAAACT...ACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATGGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: TSKSKANRLDHLQTHCILWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SKSKANRLDHLQTHCILKWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: SAHSLCARLLISIDTVPELRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...TTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp GCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGAGTGACCAGTCAGCATaGCCTCCTAACTTGATAAGT +
Preference number: 5 (lower is better)
Translates to: AHSLCARLLISIDTVPEQSDQSA*PPNLIS
Trigger: ACTTATCAAGTTAGGAGGCAATGCTGACTGGTCACT...CTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTAGTGACCAGTCAGCATaGCCTCCTAACTTGATAAGT +
Preference number: 5 (lower is better)
Translates to: LCARLLISIDTVPEQVVGSDQSA*PPNLIS
Trigger: ACTTATCAAGTTAGGAGGCAATGCTGACTGGTCACT...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: CARLLISIDTVPEQVVGIDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LCARLLISIDTVPEQVVGISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...ACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGTCAGCACTCCTAACTaGATAAGTAGACCACAATTG +
Preference number: 5 (lower is better)
Translates to: WSAHSLCARLLISIDTVPVSTPN*ISRPQL
Trigger: CAATTGTGGTCTACTTATCAAGTTAGGAGTGCTGAC...TGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341249.11
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGGTCAGCACTCCTAACTaGATAAGTAGACCACAATTG +
Preference number: 5 (lower is better)
Translates to: LIVCVPGCSSVLILSQNRVSTPN*ISRPQL
Trigger: CAATTGTGGTCTACTTATCAAGTTAGGAGTGCTGAC...CCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCGGTTGCTCATCAGTATaGATACTGTCCCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: TSKSKANRLDHLQTHCILGCSSV*ILSQNR
Trigger: CCTGTTCTGGGACAGTATCAATACTGATGAGCAACC...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACT +
Preference number: 5 (lower is better)
Translates to: LLIVCVPGCSSVLILSQNSLCAR*LISIDT
Trigger: AGTATCAATACTGATGAGCAACCTGGCACACAAACT...GTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: SKSKANRLDHLQTHCILKLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp GATACTGTCCCAGAACAGGTTGTAGGTATAATTCAGAGACTGTCCTTTGCAAAGGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: DTVPEQVVGIIQRLSFAKDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...CTTTGCAAAGGACAGTCTCTGAATTATACCTACAACCTGTTCTGGGACAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: TSKSKANRLDHLQTHCILDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTAGGTATAATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: CARLLISIDTVPEQVVGIISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...TATACCTACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: KWSAHSLCARLLISIDTVISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTCAGCACTCCTAACTaGATAAGTAGACCACAATTG +
Preference number: 5 (lower is better)
Translates to: HSLCARLLISIDTVPEQVVSTPN*ISRPQL
Trigger: CAATTGTGGTCTACTTATCAAGTTAGGAGTGCTGAC...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341249.11
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp ATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACT +
Preference number: 5 (lower is better)
Translates to: IVCVPGCSSVLILSQNRLSLCAR*LISIDT
Trigger: AGTATCAATACTGATGAGCAACCTGGCACACAAACT...CAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATATCCCATTGGTCTGCTCATAGTTaGTGTGCCAGGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SLSASKDSRGMWTHFISHWSAHS*CARLLI
Trigger: GATGAGCAACCTGGCACACAAACTATGAGCAGACCA...ATGGGATATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp AAAGGAAATGACCAGCATTTCAACTGTATGTCTTCCTGGAAGGGTAGATTCTGCAGTGACCAGTCAGCATaGCCTCCTAACTTGATAAGT +
Preference number: 5 (lower is better)
Translates to: KGNDQHFNCMSSWKGRFCSDQSA*PPNLIS
Trigger: ACTTATCAAGTTAGGAGGCAATGCTGACTGGTCACT...GCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SKSKANRLDHLQTHCILKISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATCTTCAGACCCACTGCATTCTCAAGCTGAAGTGGTCTGCTCATAGTTTGTGTTCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: HLQTHCILKLKWSAHSLCSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...ACACAAACTATGAGCAGACCACTTCAGCTTGAGAATGCAGTGGGTCTGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCAAGAGTTTGTGTGCCAGGTaGCTCATCAGTATTGATACT +
Preference number: 5 (lower is better)
Translates to: SKSKANRLDHLQTHCILKSLCAR*LISIDT
Trigger: AGTATCAATACTGATGAGCAACCTGGCACACAAACT...CTTGAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAGACCACAATTGGACCTaGGGATTCTTGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: HISYPICRVKLQVTSQHLDHNWT*GFLCIK
Trigger: TTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTC...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CAA 90 bp AAGTGGTCTGCTCATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCTCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: KWSAHSLCARLLISIDTVSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...GACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp AGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTGTATCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: SLCARLLISIDTVPEQVVSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...TACAACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp CATAGTTTGTGTGCCAGGTTGCTCATCAGTATTGATACTGTCCCAGAACAGGTTTCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: HSLCARLLISIDTVPEQVSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...AACCTGTTCTGGGACAGTATCAATACTGATGAGCAACCTGGCACACAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp ACATCAAAATCTAAGGCAAACAGACTTGACCATCTTCAGACCCACTGCATTCTCTCTGCTATATCTTCTTaGTCTGCATCAAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: TSKSKANRLDHLQTHCILSAISS*SASKDS
Trigger: TGAGTCTTTTGATGCAGACAAAGAAGATATAGCAGA...GAGAATGCAGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAGATTTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
ENST00000590964.5
ENST00000615984.4
CDS-3UTR CAA 90 bp TATATCTTCTTTGTCTGCATCAAAAGACTCAAGAGGAATGTGGACACATTTCATCTAAGGCAAACAGACTaGACCATCTTCAGACCCACT +
Preference number: 5 (lower is better)
Translates to: YIFFVCIKRLKRNVDTFHLRQTD*TIFRPT
Trigger: AGTGGGTCTGAAGATGGTCAAGTCTGTTTGCCTTAG...ATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACAAAGAAGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000588302.5
ENST00000588783.5
CDS-3UTR CAA 90 bp CACATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAGGGTCATCCATACTaGCCTCCTAACTTGATAAGT +
Preference number: 5 (lower is better)
Translates to: HISYPICRVKLQVTSQHLKGHPY*PPNLIS
Trigger: ACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTT...TAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CAA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAAATAAGTAGACCACAATaGGACCTTGGGATTCTTGTG +
Preference number: 5 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKISRPQ*DLGILV
Trigger: CACAAGAATCCCAAGGTCCAATTGTGGTCTACTTAT...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS-3UTR CAA 90 bp ATTTCATATCCCATTTGTAGAGTAAAGCTTCAAGTGACCAGTCAGCACTTAAAATACTTGCCTCCTAACTaGATAAGTAGACCACAATTG +
Preference number: 5 (lower is better)
Translates to: ISYPICRVKLQVTSQHLKYLPPN*ISRPQL
Trigger: CAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTA...TTTTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATGGGATATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS CCA 72 bp CTCCTGGCGGGTGCTGCTGCACGCACCTGCGGGACGTaGACCTCCAGGACAGCCCCGTCGGCCCCCGGACCC +
Preference number: 6 (lower is better)
Translates to: LLAGAAARTCGT*TSRTAPSAPGP
Trigger: GGGTCCGGGGGCCGACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586738.5
ENST00000586752.5
ENST00000588822.1
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp CTCAGGCGCCTCCTGGCGGGTGCTGCTGCACGCACCTaGGGGACGTGGACCTCCAGGACAGCCCCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: LRRLLAGAAART*GTWTSRTAPSA
Trigger: GGCCGACGGGGCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586738.5
ENST00000586752.5
ENST00000588822.1
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp GTCCTCGGAAATCGTGCTCGCCCAGTAGGGCGTCGTTaGGCCCCGGGCGGGCGGGGGACCGCGGAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: VLGNRARPVGRR*APGGRGTAEGS
Trigger: GGAGCCTTCCGCGGTCCCCCGCCCGCCCGGGGCCCAACGACGCCCTACTGGGCGAGCACGATTTCCGAGGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000341249.11
ENST00000586200.1
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp AAGCGCTGGGCCCGGACCCCCTGTCCTCGGAAATCGTaGTCGCCCAGTAGGGCGTCGTTGGGCCCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: KRWARTPCPRKS*SPSRASLGPGR
Trigger: CCGCCCGGGGCCCAACGACGCCCTACTGGGCGAGCACGATTTCCGAGGACAGGGGGTCCGGGCCCAGCGCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000341249.11
ENST00000586200.1
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp GATGCAGGACCTCAGGCGCCTCCTGGCGGGTGCTGCTaGACGCACCTGCGGGACGTGGACCTCCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: DAGPQAPPGGCC*THLRDVDLQDS
Trigger: GCTGTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCCTGCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp GGAGATGCAGGACCTCAGGCGCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGACGTGGACCTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: GDAGPQAPPGGC*CTHLRDVDLQD
Trigger: GTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCCTGCATCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586738.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp GCCCCCGGACCCGGCTCCTCCGAGAATCGAAAGCGCTaGGCCCGGACCCCCTGTCCTCGGAAATCGTGCTCG +
Preference number: 6 (lower is better)
Translates to: APGPGSSENRKR*ARTPCPRKSCS
Trigger: CGAGCACGATTTCCGAGGACAGGGGGTCCGGGCCCAGCGCTTTCGATTCTCGGAGGAGCCGGGTCCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000341249.11
ENST00000586200.1
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp GTCAGCCGACATCCGCTCCTGACCTCAGGCGCCTCCTaGCGGGTGCTGCTGCACGCACCTGCGGGACGTGGA +
Preference number: 6 (lower is better)
Translates to: VSRHPLLTSGAS*RVLLHAPAGRG
Trigger: TCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGGTCAGGAGCGGATGTCGGCTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588822.1
CDS GCA 72 bp CTCCAGCTCCAATCTCAGGCGCCTCCTGGCGGGTGCTaGTGCACGCACCTGCGGGACGTGGACCTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: LQLQSQAPPGGC*CTHLRDVDLQD
Trigger: GTCCTGGAGGTCCACGTCCCGCAGGTGCGTGCAGCAGCACCCGCCAGGAGGCGCCTGAGATTGGAGCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586752.5
CDS CCA 72 bp CCGGAGCAAGGCGAAAGAGACTCACACGCGCAGAACTaGCAACGGGCGGCTGGCGCGACCGGAAGTGATGGG +
Preference number: 6 (lower is better)
Translates to: PEQGERDSHAQN*QRAAGATGSDG
Trigger: CCCATCACTTCCGGTCGCGCCAGCCGCCCGTTGCCAGTTCTGCGCGTGTGAGTCTCTTTCGCCTTGCTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615984.4
CDS TCA 72 bp CGAGCGGGAAGCCGCGGGCCACGTGGCCGTAGCACCTaGCGGCAAGAAGGGGAAAGCCCAGATCTGGTGATA +
Preference number: 6 (lower is better)
Translates to: RAGSRGPRGRST*RQEGESPDLVI
Trigger: TATCACCAGATCTGGGCTTTCCCCTTCTTGCCGTCAGGTGCTACGGCCACGTGGCCCGCGGCTTCCCGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586752.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp GGGGAAAGCCCAGATCTGGTGATAACCCTGCCGCGCTaGGAGCGAAGAAAGCCCGGAGCAAGGCGAAAGAGA +
Preference number: 6 (lower is better)
Translates to: GESPDLVITLPR*ERRKPGARRKR
Trigger: TCTCTTTCGCCTTGCTCCGGGCTTTCTTCGCTCGCAGCGCGGCAGGGTTATCACCAGATCTGGGCTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341249.11
ENST00000586752.5
ENST00000588783.5
ENST00000588822.1
ENST00000590964.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp AGGACCACAGCACAGGGCCAAACATACATTCCATACTaGAGATGCAGGACCTGCGGGACGTGGACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RTTAQGQTYIPY*RCRTCGTWTSR
Trigger: CCTGGAGGTCCACGTCCCGCAGGTCCTGCATCTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341249.11
ENST00000588783.5
CDS CCA 72 bp AGGACCACAGCACAGGGCCAAACATACATTCCATACTaGAGATGCAGGACACGCGCAGAACTGGCAACGGGC +
Preference number: 6 (lower is better)
Translates to: RTTAQGQTYIPY*RCRTRAELATG
Trigger: GCCCGTTGCCAGTTCTGCGCGTGTCCTGCATCTCCAGTATGGAATGTATGTTTGGCCCTGTGCTGTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588563.5
ENST00000589977.5
CDS CCA 72 bp TATTACTTCTGCACCACATTTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCCAATCTGCGGGACGTG +
Preference number: 6 (lower is better)
Translates to: YYFCTTFGSQNS*KAHSSSNLRDV
Trigger: CACGTCCCGCAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588302.5
ENST00000590964.5
CDS CCA 72 bp TATTACTTCTGCACCACATTTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCCAATCTCAGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: YYFCTTFGSQNS*KAHSSSNLRRL
Trigger: GAGGCGCCTGAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586752.5
CDS TCA 72 bp TCTTGTGGTGGTAGAGCCAGAAGATCCCAAGATATATaGCCCCATGTTAGTCCTACCACCTGCAGATGTGGC +
Preference number: 6 (lower is better)
Translates to: SCGGRARRSQDI*PHVSPTTCRCG
Trigger: GCCACATCTGCAGGTGGTAGGACTAACATGGGGTCATATATCTTGGGATCTTCTGGCTCTACCACCACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588563.5
ENST00000588783.5
ENST00000588822.1
ENST00000588964.1
ENST00000589581.1
ENST00000589977.5
ENST00000590964.5
ENST00000591571.5
ENST00000592849.5
ENST00000615984.4
CDS GCA 72 bp GAAGGCTCACTCCAGCTCCAATCTCTAAGATGGCCTTaGCTGGCAGAGATCTTCTGTGAAACCAAAGGTACT +
Preference number: 6 (lower is better)
Translates to: EGSLQLQSLRWP*LAEIFCETKGT
Trigger: AGTACCTTTGGTTTCACAGAAGATCTCTGCCAGGCAAGGCCATCTTAGAGATTGGAGCTGGAGTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000588563.5
ENST00000588783.5
ENST00000589581.1
ENST00000589977.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp CTGAGCTGTCTGACAGTATTACTTCTGCACCACATTTaGCAGCCAAAATTCCTGGAAGGCTCACTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LSCLTVLLLHHI*QPKFLEGSLQL
Trigger: GAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATACTGTCAGACAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000341249.11
ENST00000586738.5
ENST00000586752.5
ENST00000588302.5
ENST00000588563.5
ENST00000588783.5
ENST00000588822.1
ENST00000588964.1
ENST00000589581.1
ENST00000589977.5
ENST00000590964.5
ENST00000591571.5
ENST00000592849.5
ENST00000615984.4
CDS CCA 72 bp TATTACTTCTGCACCACATTTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCCAATACGCGCAGAACT +
Preference number: 6 (lower is better)
Translates to: YYFCTTFGSQNS*KAHSSSNTRRT
Trigger: AGTTCTGCGCGTATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591571.5
CDS CCA 72 bp TATTACTTCTGCACCACATTTGGCAGCCAAAATTCCTaGAAGGCTCACTCCAGCTCCAATCTAATAAGTTAT +
Preference number: 6 (lower is better)
Translates to: YYFCTTFGSQNS*KAHSSSNLISY
Trigger: ATAACTTATTAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588964.1
CDS CAA 72 bp ATAAAAAGTAAGGGTCATCCATACTTGCCTCCTAACTaGATAAGTAGACCACAATTGGACCTTGGGATTCTT +
Preference number: 6 (lower is better)
Translates to: IKSKGHPYLPPN*ISRPQLDLGIL
Trigger: AAGAATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTTACTTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589977.5
ENST00000591571.5
CDS CAA 90 bp AAGTTACATATAAAAAGTAAGGGTCATCCATACTTGCCTCCTAACTaGATAAGTAGACCACAATTGGACCTTGGGATTCTTGTGCATCAA +
Preference number: 6 (lower is better)
Translates to: KLHIKSKGHPYLPPN*ISRPQLDLGILVHQ
Trigger: TTGATGCACAAGAATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTTACTTTTTATATGTAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589977.5
ENST00000591571.5
CDS CAA 90 bp AGAGTAAGGCTTAAGTTACATATAAAAAGTAAGGGTCATCCATACTaGCCTCCTAACTTGATAAGTAGACCACAATTGGACCTTGGGATT +
Preference number: 6 (lower is better)
Translates to: RVRLKLHIKSKGHPY*PPNLISRPQLDLGI
Trigger: AATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTTACTTTTTATATGTAACTTAAGCCTTACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589977.5
ENST00000591571.5
CDS CAA 72 bp CTTAAGTTACATATAAAAAGTAAGGGTCATCCATACTaGCCTCCTAACTTGATAAGTAGACCACAATTGGAC +
Preference number: 6 (lower is better)
Translates to: LKLHIKSKGHPY*PPNLISRPQLD
Trigger: GTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTTACTTTTTATATGTAACTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589977.5
ENST00000591571.5