RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL22 (Homo sapiens)

Ensembl gene IDs: ENSG00000067365

Ensembl transcript IDs: ENST00000163678.11, ENST00000381920.8, ENST00000561758.5, ENST00000561993.5, ENST00000562151.2, ENST00000562973.1, ENST00000563037.1, ENST00000563501.1, ENST00000563958.5, ENST00000564107.1, ENST00000564133.1, ENST00000564554.1, ENST00000564624.1, ENST00000565866.5, ENST00000567295.5, ENST00000568967.5, ENST00000569597.1, ENST00000572956.5

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGGTGGAGCCTGTaGTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTGGAGTCACCC +
Preference number: 1 (lower is better)
Translates to: PGTQASPPAGLGWSL*LEGLLHHLFALESP
Trigger: GGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR TCA 90 bp GAGAAGCCAGGAAACCTGAGCTGCAAGGGAGGCGGAAAGGGGCCATaGAAGGCCCTGGTGCAAAGTGTGCGGCAGCAGCAAGGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: EKPGNLSCKGGGKGP*KALVQSVRQQQGRG
Trigger: TCCCCTGCCTTGCTGCTGCCGCACACTTTGCACCAGGGCCTTTCATGGCCCCTTTCCGCCTCCCTTGCAGCTCAGGTTTCCTGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 90 bp GAAGCGAGTGTGGGCAGGGACAGTGCATGGAGAAGCCAGGAAACCTaGGCTGCAAGGGAGGCGGAAAGGGGCCATGAAAGGCCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: EASVGRDSAWRSQET*AAREAERGHERPWC
Trigger: GCACCAGGGCCTTTCATGGCCCCTTTCCGCCTCCCTTGCAGCTCAGGTTTCCTGGCTTCTCCATGCACTGTCCCTGCCCACACTCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 90 bp CGCTGTACATCCTCGGAAGAGGTCCTGTCGGAACAGGATGTAGTCTaGCAGGAGCAGGGCGCCCCGCCACACCTGCTTGCCAACATCCTC +
Preference number: 1 (lower is better)
Translates to: RCTSSEEVLSEQDVV*QEQGAPPHLLANIL
Trigger: GAGGATGTTGGCAAGCAGGTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR CCA 90 bp CAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGGTaGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTG +
Preference number: 1 (lower is better)
Translates to: QMVPGTQASPPAGLG*SLCLEGLLHHLFAL
Trigger: CAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR GCA 90 bp ACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTaGAGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCA +
Preference number: 1 (lower is better)
Translates to: TGSTTDGARHAGFTP*RTRVEPVLGGLASS
Trigger: TGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR TCA 90 bp CCAAGGGGCGGAGGGAAAATGAGTCCAGGCGGAAGGGAACACCTCTaGGGAAGATCACTGCACAAACCCTGGTCAGCTGCACATGACCCC +
Preference number: 1 (lower is better)
Translates to: PRGGGKMSPGGREHL*GRSLHKPWSAAHDP
Trigger: GGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGATCTTCCTCAGAGGTGTTCCCTTCCGCCTGGACTCATTTTCCCTCCGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp AACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTGGAGGCGCTC +
Preference number: 1 (lower is better)
Translates to: NSRDAAPCGGDGSCY*FCDDLPELQLLEAL
Trigger: GAGCGCCTCCAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR CCA 90 bp CTTGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTaGTCTTCTCACCACGTCCAAATCCCCATCCTCATCCAGCTGAGC +
Preference number: 1 (lower is better)
Translates to: LVSQRPCWVGIRGGS*SSHHVQIPILIQLS
Trigger: GCTCAGCTGGATGAGGATGGGGATTTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR TCA 90 bp TGGCCTCACCCACTGGATACTGGTGGCACCCGTCTCCCCTACTTGTaGCCACCGAAAATGTCTCCAGGCACTGCCAAATGTTCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: WPHPLDTGGTRLPYL*PPKMSPGTAKCSWR
Trigger: CCTCCAGGAACATTTGGCAGTGCCTGGAGACATTTTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp CTGCTCCAGCGGGAATGTGGGAAAAGCACAGGCTCAGGAGTCAGATaGACATGGGTGGACATGGGCTCTAAACCTGACTCTGCCCTTGGT +
Preference number: 1 (lower is better)
Translates to: LLQRECGKSTGSGVR*TWVDMGSKPDSALG
Trigger: ACCAAGGGCAGAGTCAGGTTTAGAGCCCATGTCCACCCATGTCCATCTGACTCCTGAGCCTGTGCTTTTCCCACATTCCCGCTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp ATAGAACGTTCAGCAGCATCTCTGGCCTCACCCACTGGATACTGGTaGCACCCGTCTCCCCTACTTGTGACCACCGAAAATGTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: IERSAASLASPTGYW*HPSPLLVTTENVSR
Trigger: CCTGGAGACATTTTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAACGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp CTAGAATCATGGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTTaGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGTCCAAATCCC +
Preference number: 1 (lower is better)
Translates to: LESWDVPCLSEALLG*NQRRLVVFSPRPNP
Trigger: GGGATTTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR TCA 90 bp CTCACCAGAGTGATGGGGTGGAGCATACCCAACCCTGGGAGGAAATaGGGCTTTTGTGCCGAGCGGCAATATGATGGCAATACTGGCAGT +
Preference number: 1 (lower is better)
Translates to: LTRVMGWSIPNPGRK*GFCAERQYDGNTGS
Trigger: ACTGCCAGTATTGCCATCATATTGCCGCTCGGCACAAAAGCCTCATTTCCTCCCAGGGTTGGGTATGCTCCACCCCATCACTCTGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 90 bp GGACCAAAACTGGAGAGAAGGAGAGAGACAGTGGGACATAGAGGATaGCAGGAAGGGGTGGAGATGGGAGGAGAGAGGCACAGATGGAGA +
Preference number: 1 (lower is better)
Translates to: GPKLERRRETVGHRG*QEGVEMGGERHRWR
Trigger: TCTCCATCTGTGCCTCTCTCCTCCCATCTCCACCCCTTCCTGTCATCCTCTATGTCCCACTGTCTCTCTCCTTCTCTCCAGTTTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp GTGCTTCCTCTCCCAGGACGTCGTCTTCTTCCTGTGCTAGAATCATaGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAG +
Preference number: 1 (lower is better)
Translates to: VLPLPGRRLLPVLES*DVPCLSEALLGWNQ
Trigger: CTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR CCA 90 bp GTAGCAGGAAGATGGGACCAAAACTGGAGAGAAGGAGAGAGACAGTaGGACATAGAGGATGACAGGAAGGGGTGGAGATGGGAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: VAGRWDQNWREGERQ*DIEDDRKGWRWEER
Trigger: TCTCTCCTCCCATCTCCACCCCTTCCTGTCATCCTCTATGTCCCACTGTCTCTCTCCTTCTCTCCAGTTTTGGTCCCATCTTCCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp ATTATAGAACGTTCAGCAGCATCTCTGGCCTCACCCACTGGATACTaGTGGCACCCGTCTCCCCTACTTGTGACCACCGAAAATGTCTCC +
Preference number: 1 (lower is better)
Translates to: IIERSAASLASPTGY*WHPSPLLVTTENVS
Trigger: GGAGACATTTTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAACGTTCTATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp TTACCGCATTATAGAACGTTCAGCAGCATCTCTGGCCTCACCCACTaGATACTGGTGGCACCCGTCTCCCCTACTTGTGACCACCGAAAA +
Preference number: 1 (lower is better)
Translates to: LPHYRTFSSISGLTH*ILVAPVSPTCDHRK
Trigger: TTTTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAACGTTCTATAATGCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 90 bp ATGATGGCAATACTGGCAGTGGTAGTCAACCCATCTGTAAACAGCTaGCAGAGGGCAGTACAAGAATCCACCTCACAGCCAGGGCCGCAA +
Preference number: 1 (lower is better)
Translates to: MMAILAVVVNPSVNS*QRAVQESTSQPGPQ
Trigger: TTGCGGCCCTGGCTGTGAGGTGGATTCTTGTACTGCCCTCTGTCAGCTGTTTACAGATGGGTTGACTACCACTGCCAGTATTGCCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp CTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCG +
Preference number: 1 (lower is better)
Translates to: LFSTDSMAVQAFFNL*ASRESVLNTASVKS
Trigger: CGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
3UTR TCA 90 bp AAACAGGATGGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTTGGGATCTGTGCAGAGGTCGTCCTT +
Preference number: 1 (lower is better)
Translates to: KQDGGVIVQVRNFLL*PTEGDLGICAEVVL
Trigger: AAGGACGACCTCTGCACAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACCATCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR TCA 90 bp ACACCTCTGAGGAAGATCACTGCACAAACCCTGGTCAGCTGCACATaGCCCCAAAGAGTGGCTCTTAGGTTTATTCCAAACGTACCTGAT +
Preference number: 1 (lower is better)
Translates to: TPLRKITAQTLVSCT*PQRVALRFIPNVPD
Trigger: ATCAGGTACGTTTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGATCTTCCTCAGAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 90 bp TTAGAGGAAGCTTTCAGGCCCAGTGGTTTAGACATAAAAGCAGTTTaGCCTAATGCGGCAGGTGAAAGCTGTGACAACTCTATTGCTTGG +
Preference number: 1 (lower is better)
Translates to: LEEAFRPSGLDIKAV*PNAAGESCDNSIAW
Trigger: CCAAGCAATAGAGTTGTCACAGCTTTCACCTGCCGCATTAGGGCAAACTGCTTTTATGTCTAAACCACTGGGCCTGAAAGCTTCCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp AGATCACTGCACAAACCCTGGTCAGCTGCACATGACCCCAAAGAGTaGCTCTTAGGTTTATTCCAAACGTACCTGATTTGGGTGATAAAG +
Preference number: 1 (lower is better)
Translates to: RSLHKPWSAAHDPKE*LLGLFQTYLIWVIK
Trigger: CTTTATCACCCAAATCAGGTACGTTTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 90 bp AAACATGGCAATGGGGGCGCGCTCCCACTCTGGGAAATGAAAATCTaGCGATACTTTGAATTACAGTGGATCAAGATTAATTCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: KHGNGGALPLWEMKI*RYFELQWIKINSRL
Trigger: GAGCCTGGAATTAATCTTGATCCACTGTAATTCAAAGTATCGTCAGATTTTCATTTCCCAGAGTGGGAGCGCGCCCCCATTGCCATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 90 bp TTTTGGACCTCAGTCTTCTCCGCTGTAATGTGGGTATCACAAGGCTaGGGACCTCCTAAATTTGTTGGGAAGATGAAGTTAGACTTGCAA +
Preference number: 1 (lower is better)
Translates to: FWTSVFSAVMWVSQG*GPPKFVGKMKLDLQ
Trigger: TTGCAAGTCTAACTTCATCTTCCCAACAAATTTAGGAGGTCCGCAGCCTTGTGATACCCACATTACAGCGGAGAAGACTGAGGTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 90 bp CTGACGTACTGCCAGTTGTTGGCTCTGTCTAGTGGGGTTCTGATTTaGAGACTCATTATTAATATTCCCTGTAGTGATCTGCAATGCTGC +
Preference number: 1 (lower is better)
Translates to: LTYCQLLALSSGVLI*RLIINIPCSDLQCC
Trigger: GCAGCATTGCAGATCACTACAGGGAATATTAATAATGAGTCTTCAAATCAGAACCCCACTAGACAGAGCCAACAACTGGCAGTACGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 90 bp TTACCTAGCAGAACATCCCCATGGTTTGGTGATTCTGAATATCGCTaGCAAACAAGCACTTGTAGAGGCTCAAACAAGGCCATAAAACAT +
Preference number: 1 (lower is better)
Translates to: LPSRTSPWFGDSEYR*QTSTCRGSNKAIKH
Trigger: ATGTTTTATGGCCTTGTTTGAGCCTCTACAAGTGCTTGTTTGGCAGCGATATTCAGAATCACCAAACCATGGGGATGTTCTGCTAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 90 bp TCATTATTAATATTCCCTGTAGTGATCTGCAATGCTGCTCCATTATaGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: SLLIFPVVICNAAPL*QVCQERSLCRNFRK
Trigger: TTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGGAGCAGCATTGCAGATCACTACAGGGAATATTAATAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 90 bp AGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: SCGKEASTGSTTKRS*PSASCSSACRQERK
Trigger: CTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR-3UTR CCA 90 bp AGCAGGGCGCCCCGCCACACCTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGTCTCAGAGGCCCTGCTaGGTTGGAATCAGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: SRAPRHTCLPTSSRGVAMSQRPC*VGIRGG
Trigger: GCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGA...CATGGCCACGCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGGCGCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR TCA 90 bp GGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGCAGCCAGGTGGCTGTTaGGGGCAATGTTTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: GLHHEAQLAICELLQRVQQPGGC*GQCFAG
Trigger: GCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTG...CTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR TCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGTGGGTGGAACTGAGCTaGGAAGGAACGTGGCTCGGC +
Preference number: 2 (lower is better)
Translates to: PGPWHEGLANARGMMGLGWVELS*EGTWLG
Trigger: GCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCA...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp ACCTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTCTGATGGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTC +
Preference number: 2 (lower is better)
Translates to: TCLPTSSRGVAMVCSILMVRAAL*FLSQDV
Trigger: GACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCAC...CATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR GCA 90 bp CCTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGGCAGGCTTCACCCCCTaGAGGACTAGGGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: PVPQTTSASVLPPLESELAGFTP*RTRVEP
Trigger: AGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGC...CAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR-3UTR CCA 90 bp CTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACCCAGTGGCAGCCAGGTaGCTGTTGAGGGCAATGTTT +
Preference number: 2 (lower is better)
Translates to: LQLLEALVNQELWEGGLHPVAAR*LLRAMF
Trigger: AAACATTGCCCTCAACAGCCACCTGGCTGCCACTGG...GTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR GCA 90 bp GGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGTGTGCTTGGAGGGCTTaGTTCATCACCTCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GSTTDGARHAGFTPCRTRCAWRA*FITSLP
Trigger: GGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACA...CCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR-3UTR TCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAAACAGGCAACTAAAGTaGCCTCCAGCCCACAGCAAC +
Preference number: 2 (lower is better)
Translates to: DVGGTELRRNVARLDPGANRQLK*PPAHSN
Trigger: GTTGCTGTGGGCTGGAGGTCACTTTAGTTGCCTGTT...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR TCA 90 bp CGAGCTCCAGCGCTGTACATCCTCGGAAGAGGTCCTGTCGGAACAGGATGTAGTCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RAPALYILGRGPVGTGCSPSSSS*ASATSW
Trigger: CCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGG...ACTACATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAGCGCTGGAGCTCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR GCA 90 bp CACCTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTCTGATGTCTCTCAGAGGCCCTaGTGGGTTGGAATCAGAGGC +
Preference number: 2 (lower is better)
Translates to: HLLANILQGRGHGVLYSDVSQRP*WVGIRG
Trigger: GCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGAC...ATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR CCA 90 bp CAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCAGGGCAATGTTTCGCTaGCACATGGACAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: QLAICELLQRVQAGAEVIRAMFR*HMDKRS
Trigger: AGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCT...GATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR CAA 90 bp CCCAGGACGTCGTCTTCTTCCTGTGCTAGAATCATGGGATGTACCTaGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGT +
Preference number: 2 (lower is better)
Translates to: PRTSSSSCARIMGCT*SLRGPAGLESEAAR
Trigger: ACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGCACAGGAAGAAGACGACGTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR GCA 90 bp TCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGCATGGACAAGAGATCTaGACCGACATCTGTACAATA +
Preference number: 2 (lower is better)
Translates to: STTKRSLPSASCSSACRQHGQEI*TDICTI
Trigger: TATTGTACAGATGTCGGTGCAGATCTCTTGTCCATG...CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR GCA 90 bp AAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCCAACGGGGCTAGGGTGGAGCCTGTaGTTGGAGGGCTTGCTTCAT +
Preference number: 2 (lower is better)
Translates to: KQPLPRSCLLWSLNCPTGLGWSL*LEGLLH
Trigger: ATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAG...CCCCGTTGGACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR-3UTR CCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 2 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR-3UTR CCA 90 bp TTCCTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACGGTGGAGCCTGTGCTTaGAGGGCTTGCTTCATCACC +
Preference number: 2 (lower is better)
Translates to: FLFPKQPLPRSCLLWSLNGGACA*RACFIT
Trigger: GGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACC...GTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CAA 90 bp GCTAGAATCATGGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTaGGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGTCCAAATCC +
Preference number: 2 (lower is better)
Translates to: ARIMGCTLSLRGPAG*ESEAARGLLTTSKS
Trigger: GGATTTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR-3UTR TCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAAGCACACAGCTGAAATaGCTGACGTGGGTGGAACTG +
Preference number: 2 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTSTQLK*LTWVEL
Trigger: CAGTTCCACCCACGTCAGTCATTTCAGCTGTGTGCT...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCTTCACATGTGACGTCCAAGTGTGTTTCGCTGGCACATaGACAAGAGATCTGCACCGA +
Preference number: 2 (lower is better)
Translates to: RVQAGAEVIVGFTCDVQVCFAGT*TRDLHR
Trigger: TCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACA...CACTTGGACGTCACATGTGAAGCCTACGATCACTTCCGCTCCTGCCTGCACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR TCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGGGCCCTCACCAGAGTaGTGGGGTGGAGCATACCCA +
Preference number: 2 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGGPSPE*WGGAYP
Trigger: TGGGTATGCTCCACCCCATCACTCTGGTGAGGGCCC...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR TCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGGCGGAAAGGGGCCATaGAAGGCCCTGGTGCAAAGT +
Preference number: 2 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLGGKGP*KALVQS
Trigger: ACTTTGCACCAGGGCCTTTCATGGCCCCTTTCCGCC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR TCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAGACAAACAAGGTCCCTaGCCTCATGGAGACTTTTTC +
Preference number: 2 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTDKQGP*PHGDFF
Trigger: GAAAAAGTCTCCATGAGGTCAGGGACCTTGTTTGTC...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGCATGAAAGGCCCTGGTaGAAAGTGTGCGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLHERPW*KVCGSS
Trigger: GCTGCTGCCGCACACTTTGCACCAGGGCCTTTCATG...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAAGATGGGACCAAAACTaGAGAGAAGGAGAGAGACAG +
Preference number: 2 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTRWDQN*REGERQ
Trigger: CTGTCTCTCTCCTTCTCTCCAGTTTTGGTCCCATCT...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR TCA 90 bp GCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACACCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTG +
Preference number: 2 (lower is better)
Translates to: AVQAFFNLWASRESVLNTPLVTN*RGPWDL
Trigger: CAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGG...TGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR GCA 90 bp GCTGTTGAGGGCAATGTTTCGCTGGCACATGGACAAGAGATCTGCACCGACATCACAATAAACGGTCCGTaGCATGGTGGCTGCGATGAT +
Preference number: 2 (lower is better)
Translates to: AVEGNVSLAHGQEICTDITINGP*HGGCDD
Trigger: ATCATCGCAGCCACCATGGCACGGACCGTTTATTGT...GATGTCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR CCA 90 bp GGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTGGAGGCGCTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAG +
Preference number: 2 (lower is better)
Translates to: GSCYWFCDDLPELQLLEALQTGW*CDRTSQ
Trigger: CTGACTTGTACGATCACACCACCATCCTGTTTGCAG...CGCCTCCAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR CCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCACCAGAGTGATGGGGTaGAGCATACCCAACCCTGGG +
Preference number: 2 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGTRVMG*SIPNPG
Trigger: CCCAGGGTTGGGTATGCTCCACCCCATCACTCTGGT...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp GAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCGTAAAACACTTCGGCTaGAAACAGGATGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: EAMGHVTGSAMIFQSSSCVKHFG*KQDGGV
Trigger: CACACCACCATCCTGTTTGCAGCCGAAGTGTTTTAC...GCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
3UTR-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGCCTCTTCCTTCTCATaGGGCCCTCACCAGAGTGAT +
Preference number: 2 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGASSFS*GPHQSD
Trigger: ATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGC...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGAAGGAGAGAGACAGTaGGACATAGAGGATGACAGG +
Preference number: 2 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLEGERQ*DIEDDR
Trigger: CCTGTCATCCTCTATGTCCCACTGTCTCTCTCCTTC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 90 bp AGTCCACTGGCCTGGGCTAATTACCTAGCAGAACATCCCCATGGTTaGGTGATTCTGAATATCGCTGCCAAACAAGCACTTGTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: SPLAWANYLAEHPHG*VILNIAAKQALVEA
Trigger: AGCCTCTACAAGTGCTTGTTTGGCAGCGATATTCAGAATCACCAAACCATGGGGATGTTCTGCTAGGTAATTAGCCCAGGCCAGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGGCCATGAAAGGCCCTaGTGCAAAGTGTGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQGHERP*CKVCGS
Trigger: GCTGCCGCACACTTTGCACCAGGGCCTTTCATGGCC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGGGGAGAAGCGAGTGTaGGCAGGGACAGTGCATGGA +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQGEKRV*AGTVHG
Trigger: TCCATGCACTGTCCCTGCCCACACTCGCTTCTCCCC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR TCA 90 bp GTGACGTCCAAGTGTCTCAATGTGAAGTTGAGCCTCTTCTCCACCGACAGTATGAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTT +
Preference number: 2 (lower is better)
Translates to: VTSKCLNVKLSLFSTDSMRNFLL*PTEGDL
Trigger: AAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCT...CATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR TCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAGAAGCCAGGAAACCTaGGCTGCAAGGGAGGCGGAA +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQRSQET*AAREAE
Trigger: TTCCGCCTCCCTTGCAGCTCAGGTTTCCTGGCTTCT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGCCTAGGGATGGAACCTaGGAGCTTGGGGAGAAGCGA +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQPRDGT*ELGEKR
Trigger: TCGCTTCTCCCCAAGCTCCCAGGTTCCATCCCTAGG...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGGCTCAGGAGTCAGATaGACATGGGTGGACATGGGC +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQGSGVR*TWVDMG
Trigger: GCCCATGTCCACCCATGTCCATCTGACTCCTGAGCC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 90 bp GGTGCCAATTACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATaGTCACCATTAGTGCTGACGTACTGCCAGTTGTTGGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: GANYIYGLVPRSARK*SPLVLTYCQLLALS
Trigger: AGACAGAGCCAACAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTAATTGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 90 bp AAGCAGTTTGCCCTAATGCGGCAGGTGAAAGCTGTGACAACTCTATaGCTTGGTGCCAATTACATTTATGGACTTGTACCCAGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: KQFALMRQVKAVTTL*LGANYIYGLVPRSA
Trigger: AGCACTCCTGGGTACAAGTCCATAAATGTAATTGGCACCAAGCAATAGAGTTGTCACAGCTTTCACCTGCCGCATTAGGGCAAACTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGGGTCACTCTCCTGCATaGTCTCACTACAGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLGHSPA*SHYRFS
Trigger: GCTGAACCTGTAGTGAGAGCATGCAGGAGAGTGACC...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGGTGAGGTCACTCTCCTaGATGCTCTCACTACAGGTT +
Preference number: 2 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLVRSLS*MLSLQV
Trigger: AACCTGTAGTGAGAGCATGCAGGAGAGTGACCTCAC...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAGCAACAACCTTCTCTaGCTACAACTGGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQSNNLL*LQLGGR
Trigger: CCTGCCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGAATAGGGATCACTTCTaGCTTTTAGGTTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLNRDHF*LLGSLK
Trigger: CTTCAAAGAACCTAAAAGGCAGAAGTGATCCCTATT...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGCATGACCCCAAAGAGTaGCTCTTAGGTTTATTCCAA +
Preference number: 2 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLHDPKE*LLGLFQ
Trigger: TTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATG...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAAGGGTAGCAGGAAGATaGGACCAAAACTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLRVAGR*DQNWRE
Trigger: TTCTCTCCAGTTTTGGTCCCATCTTCCTGCTACCCT...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGAAATCTCAAGCATGTTaGTTTGGTGAGCTTCTGATT +
Preference number: 2 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLKSQAC*FGELLI
Trigger: AATCAGAAGCTCACCAAAGCAACATGCTTGAGATTT...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp TCCTCGGAAGAGGTCCTGTCGGAACAGGATGTAGTCTaGCAGGAGCAGGGCGCCCCGCCACACCTGCTTGCC +
Preference number: 3 (lower is better)
Translates to: SSEEVLSEQDVV*QEQGAPPHLLA
Trigger: GGCAAGCAGGTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR CCA 72 bp CTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCG +
Preference number: 3 (lower is better)
Translates to: LQLLEALVNQEL*EGGLHGLHHEA
Trigger: CGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR-3UTR CAA 90 bp CAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: QLLEALVNQELWEGGLHGTTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR CCA 72 bp CCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGGTaGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTC +
Preference number: 3 (lower is better)
Translates to: PGTQASPPAGLG*SLCLEGLLHHL
Trigger: GAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR GCA 72 bp ACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTaGAGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTT +
Preference number: 3 (lower is better)
Translates to: TTDGARHAGFTP*RTRVEPVLGGL
Trigger: AAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR-3UTR CAA 90 bp CACGGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGTGTCTCAATGTGAAGTaGAGCCTCTTCTCCACCGAC +
Preference number: 3 (lower is better)
Translates to: HGLHHEAQLAICELLQRVCLNVK*SLFSTD
Trigger: GTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACA...CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
3UTR TCA 72 bp GGAAACCTGAGCTGCAAGGGAGGCGGAAAGGGGCCATaGAAGGCCCTGGTGCAAAGTGTGCGGCAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GNLSCKGGGKGP*KALVQSVRQQQ
Trigger: TTGCTGCTGCCGCACACTTTGCACCAGGGCCTTTCATGGCCCCTTTCCGCCTCCCTTGCAGCTCAGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp CAGGCTTCACCCCCTGCAGGACTAGGGTGGAGCCTGTaGTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTG +
Preference number: 3 (lower is better)
Translates to: QASPPAGLGWSL*LEGLLHHLFAL
Trigger: CAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CCA 72 bp ACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGATaGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: TGCSSPNRFHYR*CQARRLHPLQD
Trigger: GTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CCA 72 bp CGTTCAGCAGCATCTCTGGCCTCACCCACTGGATACTaGTGGCACCCGTCTCCCCTACTTGTGACCACCGAA +
Preference number: 3 (lower is better)
Translates to: RSAASLASPTGY*WHPSPLLVTTE
Trigger: TTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTaGTCTTCTCACCACGTCCAAATCCCCATCCTCATC +
Preference number: 3 (lower is better)
Translates to: QRPCWVGIRGGS*SSHHVQIPILI
Trigger: GATGAGGATGGGGATTTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR TCA 72 bp TCCTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTaGTGGGGTGGAGCATACCCAACCCTGGGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: SCLFLLMGPSPE*WGGAYPTLGGN
Trigger: ATTTCCTCCCAGGGTTGGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp GCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTaGGATGATCTTCCAGAGCTCCAGTTGCTGGAGGCG +
Preference number: 3 (lower is better)
Translates to: APCGGDGSCYWF*DDLPELQLLEA
Trigger: CGCCTCCAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR CCA 72 bp GACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: DAAPCGGDGSCY*FCDDLPELQLL
Trigger: CAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR CCA 72 bp TGGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTTaGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGT +
Preference number: 3 (lower is better)
Translates to: WDVPCLSEALLG*NQRRLVVFSPR
Trigger: ACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR GCA 72 bp GTCCAGGCGGAAGGGAACACCTCTGAGGAAGATCACTaGACAAACCCTGGTCAGCTGCACATGACCCCAAAG +
Preference number: 3 (lower is better)
Translates to: VQAEGNTSEEDH*TNPGQLHMTPK
Trigger: CTTTGGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGATCTTCCTCAGAGGTGTTCCCTTCCGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp TCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTaGATGCTCTCACTACAGGTTCAGCTGAGACCGTTT +
Preference number: 3 (lower is better)
Translates to: SCSQRGRVRSLS*MLSLQVQLRPF
Trigger: AAACGGTCTCAGCTGAACCTGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTaGGAGGCAGGGACAGACCCCAGAAAACCATCTTGG +
Preference number: 3 (lower is better)
Translates to: LQPTATTFSGYN*EAGTDPRKPSW
Trigger: CCAAGATGGTTTTCTGGGGTCTGTCCCTGCCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp GCACAGGCTCAGGAGTCAGATGGACATGGGTGGACATaGGCTCTAAACCTGACTCTGCCCTTGGTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: AQAQESDGHGWT*ALNLTLPLVAV
Trigger: CACAGCAACCAAGGGCAGAGTCAGGTTTAGAGCCCATGTCCACCCATGTCCATCTGACTCCTGAGCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp TTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATaGTCTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGT +
Preference number: 3 (lower is better)
Translates to: LWRRWVMLLVLR*SSRAPVAGGAR
Trigger: ACGAGCGCCTCCAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR TCA 72 bp CCACTGGATACTGGTGGCACCCGTCTCCCCTACTTGTaGCCACCGAAAATGTCTCCAGGCACTGCCAAATGT +
Preference number: 3 (lower is better)
Translates to: PLDTGGTRLPYL*PPKMSPGTAKC
Trigger: ACATTTGGCAGTGCCTGGAGACATTTTCGGTGGTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp GTGCTCTATTCTGATGATATCGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTCGTCTTCTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: VLYSDDIVRAAL*FLSQDVVFFLC
Trigger: GCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAGAATAGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR CCA 72 bp GTGGCAGCCAGGTGGCTGTTGAGGGCAATGTTTCGCTaGCACATGGACAAGAGATCTGCACCGACATCTGTA +
Preference number: 3 (lower is better)
Translates to: VAARWLLRAMFR*HMDKRSAPTSV
Trigger: TACAGATGTCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR CCA 72 bp TTGACCCTAACTATACCACCTCCAGTGGCAGCCAGGTaGCTGTTGAGGGCAATGTTTCGCTGGCACATGGAC +
Preference number: 3 (lower is better)
Translates to: LTLTIPPPVAAR*LLRAMFRWHMD
Trigger: GTCCATGTGCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTGCCACTGGAGGTGGTATAGTTAGGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR CCA 72 bp TATAGAACGTTCAGCAGCATCTCTGGCCTCACCCACTaGATACTGGTGGCACCCGTCTCCCCTACTTGTGAC +
Preference number: 3 (lower is better)
Translates to: YRTFSSISGLTH*ILVAPVSPTCD
Trigger: GTCACAAGTAGGGGAGACGGGTGCCACCAGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAACGTTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp AATCATGGGATGTACCTTGTCTCTCAGAGGCCCTGCTaGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: NHGMYLVSQRPC*VGIRGGSWSSH
Trigger: GTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR CCA 72 bp CTCCCAGGACGTCGTCTTCTTCCTGTGCTAGAATCATaGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: LPGRRLLPVLES*DVPCLSEALLG
Trigger: ACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGCACAGGAAGAAGACGACGTCCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
3UTR TCA 72 bp GTGATGGGGTGGAGCATACCCAACCCTGGGAGGAAATaGGGCTTTTGTGCCGAGCGGCAATATGATGGCAAT +
Preference number: 3 (lower is better)
Translates to: VMGWSIPNPGRK*GFCAERQYDGN
Trigger: ATTGCCATCATATTGCCGCTCGGCACAAAAGCCTCATTTCCTCCCAGGGTTGGGTATGCTCCACCCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp GGGAAGATGAAGTTAGACTTGCAAGTGCCTGGCCCCTaGCATGAGGGATTAGCCAATGCCAGGGGTATGATG +
Preference number: 3 (lower is better)
Translates to: GKMKLDLQVPGP*HEGLANARGMM
Trigger: CATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGGCACTTGCAAGTCTAACTTCATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CGGGAATGTGGGAAAAGCACAGGCTCAGGAGTCAGATaGACATGGGTGGACATGGGCTCTAAACCTGACTCT +
Preference number: 3 (lower is better)
Translates to: RECGKSTGSGVR*TWVDMGSKPDS
Trigger: AGAGTCAGGTTTAGAGCCCATGTCCACCCATGTCCATCTGACTCCTGAGCCTGTGCTTTTCCCACATTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CAA 90 bp ACATGGTGGCTGCTAAGAACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGACTGTGCTTGGAGGGCTaGCTTCATCACCTCTTTGCC +
Preference number: 3 (lower is better)
Translates to: TWWLLRTGCSSPNRFHYRLCLEG*LHHLFA
Trigger: GGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAG...TCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGTTCTTAGCAGCCACCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR TCA 72 bp CAAACTACTGTGCACACAAATCACCCAGGGTCTCGTTaGGATGCAGATTCGGAATCACGTCCTGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: QTTVHTNHPGSR*DADSESRPELR
Trigger: CCTCAGCTCAGGACGTGATTCCGAATCTGCATCTCAACGAGACCCTGGGTGATTTGTGTGCACAGTAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp GATCGTACAAGTCAGAAATTTCCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTGTGCAGAGGTCGTCCT +
Preference number: 3 (lower is better)
Translates to: DRTSQKFPLVTN*RGPWDLCRGRP
Trigger: AGGACGACCTCTGCACAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR TCA 72 bp GGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTTGGGATCTGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: GGVIVQVRNFLL*PTEGDLGICAE
Trigger: CTCTGCACAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR-3UTR CAA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCCCCAGAAAACCATCTaGGGTCATCTAAGGTACGTG +
Preference number: 3 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGPQKTI*GHLRYV
Trigger: CACGTACCTTAGATGACCCAAGATGGTTTTCTGGGG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp AGGAAGATCACTGCACAAACCCTGGTCAGCTGCACATaGCCCCAAAGAGTGGCTCTTAGGTTTATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RKITAQTLVSCT*PQRVALRFIPN
Trigger: GTTTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGATCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CACAAACCCTGGTCAGCTGCACATGACCCCAAAGAGTaGCTCTTAGGTTTATTCCAAACGTACCTGATTTGG +
Preference number: 3 (lower is better)
Translates to: HKPWSAAHDPKE*LLGLFQTYLIW
Trigger: CCAAATCAGGTACGTTTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATGTGCAGCTGACCAGGGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CAA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCT +
Preference number: 3 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGSQSSS*TLTIPP
Trigger: AGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCT...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR TCA 72 bp AACATGGCAATGGGGGCGCGCTCCCACTCTGGGAAATaGAAATCTGACGATACTTTGAATTACAGTGGATCA +
Preference number: 3 (lower is better)
Translates to: NMAMGARSHSGK*KSDDTLNYSGS
Trigger: TGATCCACTGTAATTCAAAGTATCGTCAGATTTTCATTTCCCAGAGTGGGAGCGCGCCCCCATTGCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp TTGGTTTTAACAGTTCTTTCCCATGCAGGCTGCAGCTaGACAGCCAAGTCCCCTCCTTGGGTCACATATTTT +
Preference number: 3 (lower is better)
Translates to: LVLTVLSHAGCS*TAKSPPWVTYF
Trigger: AAAATATGTGACCCAAGGAGGGGACTTGGCTGTTCAGCTGCAGCCTGCATGGGAAAGAACTGTTAAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp AGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTaGCAGTTGTTGGCTCTGTCTAGTGGGGTTCTGATT +
Preference number: 3 (lower is better)
Translates to: SARKLSPLVLTY*QLLALSSGVLI
Trigger: AATCAGAACCCCACTAGACAGAGCCAACAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp AGAACATCCCCATGGTTTGGTGATTCTGAATATCGCTaGCAAACAAGCACTTGTAGAGGCTCAAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: RTSPWFGDSEYR*QTSTCRGSNKA
Trigger: GGCCTTGTTTGAGCCTCTACAAGTGCTTGTTTGGCAGCGATATTCAGAATCACCAAACCATGGGGATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CGTCGTCGTAAAACACTTCGGCTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: RRRKTLRLQTGW*CDRTSQKFPLV
Trigger: CACAAGAGGAAATTTCTGACTTGTACGATCACACCACCATCCTGTTTGCAGCCGAAGTGTTTTACGACGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
3UTR CCA 72 bp TTTCCTTTTTGGACCTCAGTCTTCTCCGCTGTAATGTaGGTATCACAAGGCTGCGGACCTCCTAAATTTGTT +
Preference number: 3 (lower is better)
Translates to: FPFWTSVFSAVM*VSQGCGPPKFV
Trigger: AACAAATTTAGGAGGTCCGCAGCCTTGTGATACCCACATTACAGCGGAGAAGACTGAGGTCCAAAAAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp AATGCGGCAGGTGAAAGCTGTGACAACTCTATTGCTTaGTGCCAATTACATTTATGGACTTGTACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: NAAGESCDNSIA*CQLHLWTCTQE
Trigger: CTCCTGGGTACAAGTCCATAAATGTAATTGGCACCAAGCAATAGAGTTGTCACAGCTTTCACCTGCCGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CCA 72 bp CCACCGAAAATGTCTCCAGGCACTGCCAAATGTTCCTaGAGGCAAAATCACTCACAAATAGGAAATAATGAC +
Preference number: 3 (lower is better)
Translates to: PPKMSPGTAKCS*RQNHSQIGNND
Trigger: GTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGTGCCTGGAGACATTTTCGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR-3UTR CAA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGGTGATGTTGGGCAAGTaGCTGAACCTCTCTGAATTT +
Preference number: 3 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLVMLGK*LNLSEF
Trigger: AAATTCAGAGAGGTTCAGCAACTTGCCCAACATCAC...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp AGACTCATTATTAATATTCCCTGTAGTGATCTGCAATaGTGCTCCATTATGGCAAGTCTGTCAGGAACGGAG +
Preference number: 3 (lower is better)
Translates to: RLIINIPCSDLQ*CSIMASLSGTE
Trigger: CTCCGTTCCTGACAGACTTGCCATAATGGAGCAGCATTGCAGATCACTACAGGGAATATTAATAATGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp TGCCAGTTGTTGGCTCTGTCTAGTGGGGTTCTGATTTaGAGACTCATTATTAATATTCCCTGTAGTGATCTG +
Preference number: 3 (lower is better)
Translates to: CQLLALSSGVLI*RLIINIPCSDL
Trigger: CAGATCACTACAGGGAATATTAATAATGAGTCTTCAAATCAGAACCCCACTAGACAGAGCCAACAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR GCA 72 bp CTCATTATTAATATTCCCTGTAGTGATCTGCAATGCTaGTCCATTATGGCAAGTCTGTCAGGAACGGAGTTT +
Preference number: 3 (lower is better)
Translates to: LIINIPCSDLQC*SIMASLSGTEF
Trigger: AAACTCCGTTCCTGACAGACTTGCCATAATGGAGCAGCATTGCAGATCACTACAGGGAATATTAATAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR TCA 72 bp GTAACTTACATTAGCAATTCATTCAACAATATGTGTTaGGCATCTACTGTTTGCCAGACCATACAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: VTYISNSFNNMC*ASTVCQTIQQG
Trigger: TCCCTGCTGTATGGTCTGGCAAACAGTAGATGCTCAACACATATTGTTGAATGAATTGCTAATGTAAGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CCTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGGGCGCCCCGCCACACCTGCTCAGTCCCGGCCTGGCTaGCCCACGCTGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PVGTGCSLPGAGRPATPAQSRPG*PTLFSR
Trigger: ACGGCTGAACAGCGTGGGGCAGCCAGGCCGGGACTG...AGCAGGTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp GCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCAGCGCAGCTTGCCATCTaGGAGCTGCTCCAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: AGGARKPGAVGRRPPRAPAQLAI*ELLQRV
Trigger: CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC...TGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GAGGTCCTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGGGCGCCCCGCCACACCCCGCCACACCTGCTTaGCAACATCCTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: EVLSEQDVVCQEQGAPPHPATPA*QHPPGA
Trigger: CGCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGG...GTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp CGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: RSAACHLRAAPARAGRSGVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...TCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: QLLEALVNQELWEGGLHGVRAAL*FLSQDV
Trigger: GACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCAC...CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCTTGCCATCTGCGAGCTaGTCCAGCGCGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLAICELLQRVQAGAEVILPSAS*SSACRQ
Trigger: CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAA...GATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GCGATGATGCTAGCGAGCCCCGTGCCGGCCCCGAGCTCCAGCGCTGTACATCCTCATCCTCCAGGGGCGTaGCCATGGTGTGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: AMMLASPVPAPSSSAVHPHPPGA*PWCALF
Trigger: GAATAGAGCACACCATGGCCACGCCCCTGGAGGATG...AGGATGTACAGCGCTGGAGCTCGGGGCCGGCACGGGGCTCGCTAGCATCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp GGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCCACCCTTGGCTCCTaGATCTGTCCAAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLHHEAQLAICELLQRVQATLGS*ICPRVL
Trigger: CAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGC...CTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR TCA 90 bp TCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STTKRSLPSASCSSACRQPSSSS*ASATSW
Trigger: CCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGG...CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR TCA 90 bp CAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCCAGCCAGGTGGCTGTTaGGGGCAATGTTTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QLAICELLQRVQAGAEVIQPGGC*GQCFAG
Trigger: GCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTG...GATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR TCA 90 bp ACGGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCCCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: TGSTTKRSLPSASCSSACPLVTN*RGPWDL
Trigger: CAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGG...GCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp GAGGTCCTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGGGCGCCCCGCCACACGTCTCTCAGAGGCCCTaGTGGGTTGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EVLSEQDVVCQEQGAPPHVSQRP*WVGIRG
Trigger: GCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGAC...GTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGVRAAL*FLSQDV
Trigger: GACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCAC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GCCCCGAGCTCCAGCGCTGTACATCCTCGGAAGAGGTCCTGTCGGAACAGGATGGAACAGGATGTAGTCTaGCAGGAGCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: APSSSAVHPRKRSCRNRMEQDVV*QEQGAP
Trigger: CGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTC...CATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAGCGCTGGAGCTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp AGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTGCGCAGCTTGCCATCTaGGAGCTGCTCCAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: RAPVAGGARKPGAVGRRPAQLAI*ELLQRV
Trigger: CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC...AGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCCCCGCCACACCTGCTTaGCAACATCCTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPPATPA*QHPPGA
Trigger: CGCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGG...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGTCCAAGCGCCCCGCCACACCTaGTTGCCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPCWVGIRGGSWSSHHVQAPRHT*LPTSSR
Trigger: CCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGGCGC...TTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGCCACTTCCTGGCCAGTaGTGTCAGTCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGPLPGQ*CQSRPG
Trigger: TCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGG...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: QLLEALVNQELWEGGLHGVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCAGACGCCGCGCCTTGTaGAGGCGATGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: AICELLQRVQAGAEVIVGRRRAL*RRWVML
Trigger: TAACATGACCCATCGCCTCCACAAGGCGCGGCGTCT...GCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGACGCCGCGCCTTGTaGAGGCGATGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: GARKPGAVGRRPPRAPPRRRRAL*RRWVML
Trigger: TAACATGACCCATCGCCTCCACAAGGCGCGGCGTCT...TCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAGGGGCGGAGGGAAAATaGGTCCAGGCGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGAGAEGK*VQAEGN
Trigger: GTTCCCTTCCGCCTGGACTCATTTTCCCTCCGCCCC...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGACAGGAAAACTGGCTaGCCCACGCTGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: ALVNQELWEGGLHGLHHEDRKTG*PTLFSR
Trigger: ACGGCTGAACAGCGTGGGGCAGCCAGTTTTCCTGTC...TTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCTTGAGGGGACCCTGTGCTaGCTGTCTCAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HLRAAPARAGRSGSDRRLEGTLC*LSQQKE
Trigger: CTCCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTC...AAGCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGCTGGAGGGGACCCTGTaGTGCCTGTCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGLEGTL*CLSQQK
Trigger: CTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAG...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCACGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: VSQRPCWVGIRGGSWSSHVRAAL*FLSQDV
Trigger: GACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCAC...GTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp GTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGCAGGGACCTTGGGATCTGTaGAGAGGTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VNQELWEGGLHGLHHEAQGPWDL*RGRPSA
Trigger: GGCTGAAGGACGACCTCTGCACAGATCCCAAGGTCC...CTGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp CGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGCAGGACCTTGGGATCTGTaGAGAGGTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RKPGAVGRRPPRAPPRSAGPWDL*RGRPSA
Trigger: GGCTGAAGGACGACCTCTGCACAGATCCCAAGGTCC...TGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp AGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGCGCAGCTTGCCATCTaGGAGCTGCTCCAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: SRDAAPCGGDGSCYWFCDAQLAI*ELLQRV
Trigger: CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC...ATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp AACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACGCAGGCTTCACCCCCTaGAGGACTAGGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NRFHYRWCQARRLHPLQDAGFTP*RTRVEP
Trigger: AGGCTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGC...GTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp AGCAGGGCGCCCCGCCACACCTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SRAPRHTCLPTSSRGVAMSFASP*EKISET
Trigger: AGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCT...CATGGCCACGCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGGCGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp GCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATGAGCCAGCTGTACCATaGCCCAGGCTCCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: AACHLRAAPARAGRSGSDEPAVP*PRLHLS
Trigger: ACTAAGGTGGAGCCTGGGCCATGGTACAGCTGGCTC...ATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGGGCGCCCCGCCACACCTGCTTGAGCCAGCTGTACCATaGCCCAGGCTCCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: LSEQDVVCQEQGAPPHLLEPAVP*PRLHLS
Trigger: ACTAAGGTGGAGCCTGGGCCATGGTACAGCTGGCTC...AAGCAGGTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp AGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACTTCCTGGCCAGTaGTGTCAGTCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RAPVAGGARKPGAVGRRPPLPGQ*CQSRPG
Trigger: TCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGG...AGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCAGCTTCAGCCACTTCCTaGCCAGTGGTGTCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: APVAGGARKPGAVGRRPPASATS*PVVSVP
Trigger: CGGGACTGACACCACTGGCCAGGAAGTGGCTGAAGC...TGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGTCTCAGAGGCCCTGCTaGGTTGGAATCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGSQRPC*VGIRGG
Trigger: GCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGA...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCAACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: PTGSTTDGARHAGFTPCRVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...CCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGCCTTGTGGAGGCGATaGGTCATGTTACTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PRSAACHLRAAPARAGRSALWRR*VMLLVL
Trigger: CAGAACCAGTAACATGACCCATCGCCTCCACAAGGC...GCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGGGGAGAAGCGAGTGTaGGCAGGGACAGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGGEKRV*AGTVHG
Trigger: TCCATGCACTGTCCCTGCCCACACTCGCTTCTCCCC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCCAGCCAGGTGGCTGTTaGGGGCAATGTTTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPQPGGC*GQCFAG
Trigger: GCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTG...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp TCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCAGCCAGGTGGCTGTTaGGGGCAATGTTTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRAPVAGGARKPGAVGRRQPGGC*GQCFAG
Trigger: GCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTG...CCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGTCTCTCAGAGGCCCTaGTGGGTTGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGVSQRP*WVGIRG
Trigger: GCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGAC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ACGGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCACAATAAACGGTCCGTaGCATGGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: TGSTTKRSLPSASCSSACTINGP*HGGCDD
Trigger: ATCATCGCAGCCACCATGGCACGGACCGTTTATTGT...GCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp CGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCTTCACATGTGACGTCCAAGTGTTGCCATCTGCGAGCTaGTCCAGCGCGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVQAGAEVIVGFTCDVQVLPSAS*SSACRQ
Trigger: CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAA...CACTTGGACGTCACATGTGAAGCCTACGATCACTTCCGCTCCTGCCTGCACGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR GCA 90 bp TCTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGTTGCCATCTGCGAGCTaGTCCAGCGCGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRAPVAGGARKPGAVGRLPSAS*SSACRQ
Trigger: CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAA...CCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CCTTGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCTCAGAGGCCCTGCTaGGTTGGAATCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PCLSEALLGWNQRRLVVFSQRPC*VGIRGG
Trigger: GCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGA...GAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp GCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGCGGCTGCAAACAGGATaGTGGTGTGATCGTACAAGT +
Preference number: 4 (lower is better)
Translates to: AQLAICELLQRVQAGAEVRLQTG*WCDRTS
Trigger: ACTTGTACGATCACACCACCATCCTGTTTGCAGCCG...CACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCGCCTTGTGGAGGCGATaGGTCATGTTACTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AICELLQRVQAGAEVIVGALWRR*VMLLVL
Trigger: CAGAACCAGTAACATGACCCATCGCCTCCACAAGGC...GCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
3UTR CAA 72 bp CCTGCAGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTaGCTTCATCACCTCTTTGCCCTGGAGTCACCCGCT +
Preference number: 4 (lower is better)
Translates to: PAGLGWSLCLEG*LHHLFALESPA
Trigger: AGCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR TCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGCCACCCTTGGCTCCTaGATCTGTCCAAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGATLGS*ICPRVL
Trigger: CAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp GCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCCGTAGGCTTCACATGTaGCGTCCAAGTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: AICELLQRVQAGAEVIVGRRLHM*RPSVSM
Trigger: CATTGAGACACTTGGACGTCACATGTGAAGCCTACG...GCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp GAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAACGTAGGCTTCACATGTaGCGTCCAAGTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: EAQLAICELLQRVQAGAERRLHM*RPSVSM
Trigger: CATTGAGACACTTGGACGTCACATGTGAAGCCTACG...TTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp CCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCTTACTGGTTCTGCGATaGTCTTCCAGAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PRSAACHLRAAPARAGRSLLVLR*SSRAPV
Trigger: AACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAA...GCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GAGGTCCTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGGGCGCCCCGCCACACATTCTGATGATATCGTaGGGGCTGCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EVLSEQDVVCQEQGAPPHILMIS*GLPCAS
Trigger: GGAAGCACAAGGCAGCCCGCACGATATCATCAGAAT...GTGTGGCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACACCGTGCCATGGTGGCTaGGATGATGCTAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTPCHGG*DDASEP
Trigger: GGGCTCGCTAGCATCATCGCAGCCACCATGGCACGG...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCCTTGCCATCTGCGAGCTaGTCCAGCGCGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPQTTSASVLPPLESELSLPSAS*SSACRQ
Trigger: CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAA...GGACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR GCA 90 bp CTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTGCGCAGCTTGCCATCTaGGAGCTGCTCCAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: LFPKQPLPRSCLLWSLNCAQLAI*ELLQRV
Trigger: CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC...ACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR GCA 90 bp AGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTAGCAACCAACGGCCCTaGTTCGGGGCCTGGACCTAC +
Preference number: 4 (lower is better)
Translates to: RTRVEPVLGGLASSPLCPSNQRP*FGAWTY
Trigger: GTAGGTCCAGGCCCCGAAGCAGGGCCGTTGGTTGCT...AGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGCGACTCCCGTCTCTGTaGGACTTAGGCGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PRLVEAMGHVTGSAMIFQRLPSL*DLGGRH
Trigger: ATGGCGGCCGCCTAAGTCCCACAGAGACGGGAGTCG...CTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp AGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGAGGCCCTGCTGGGTTaGAATCAGAGGCGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: RTVETPRLVEAMGHVTGSEALLG*NQRRLV
Trigger: CACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTC...AGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGGGCAATGTTTCGCTaGCACATGGACAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: PPRSAACHLRAAPARAGRRAMFR*HMDKRS
Trigger: AGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCT...CCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CCA 90 bp TCTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: SSRAPVAGGARKPGAVGRVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...CCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGCAGCCTTGTGGAGGCGATaGGTCATGTTACTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RKPGAVGRRPPRAPPRSAALWRR*VMLLVL
Trigger: CAGAACCAGTAACATGACCCATCGCCTCCACAAGGC...TGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAAGACGCCGCGCCTTGTaGAGGCGATGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGARRRAL*RRWVML
Trigger: TAACATGACCCATCGCCTCCACAAGGCGCGGCGTCT...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTCCTGCAGGACTAGGGTaGAGCCTGTGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RTRVEPVLGGLASSPLCPPAGLG*SLCLEG
Trigger: GCCCTCCAAGCACAGGCTCCACCCTAGTCCTGCAGG...AGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CTGTACATCCTCGGAAGAGGTCCTGTCGGAACAGGATGTAGTCTGCCAGGAGCAGTGTCAGTCCCGGCCTaGCTGCCCCACGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LYILGRGPVGTGCSLPGAVSVPA*LPHAVQ
Trigger: CTGAACAGCGTGGGGCAGCCAGGCCGGGACTGACAC...TGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp CTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTCTGATGATCCACTTCCTGGCCAGTaGTGTCAGTCCCGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLANILQGRGHGVLYSDDPLPGQ*CQSRPG
Trigger: GCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGG...ATCATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp GCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCGGCTCCATAGAAGCTTaGATTGGGACAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: AICELLQRVQAGAEVIVGGSIEA*IGTGKL
Trigger: CAGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCC...GCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR TCA 90 bp CGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: RSAACHLRAAPARAGRSGRNFLL*PTEGDL
Trigger: AAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCT...TCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp GCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAACGTAGGCTTCACATGTaGCGTCCAAGTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALVNQELWEGGLHGLHHERRLHM*RPSVSM
Trigger: CATTGAGACACTTGGACGTCACATGTGAAGCCTACG...TTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAGGCGGAAAGGGGCCATaGAAGGCCCTGGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTGGKGP*KALVQS
Trigger: ACTTTGCACCAGGGCCTTTCATGGCCCCTTTCCGCC...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGGCCTGGCCCCTGGCATaGGGGATTAGCCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGAWPLA*GISQCQ
Trigger: CTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGGC...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGGACCTCGTCCATGGCTaGCGCAGGAGCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGDLVHG*RRSQLY
Trigger: GTACAGCTGGCTCCTGCGGCAGCCATGGACGAGGTC...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR GCA 90 bp GCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAATTCTGATGATATCGTaGGGGCTGCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALVNQELWEGGLHGLHHEILMIS*GLPCAS
Trigger: GGAAGCACAAGGCAGCCCGCACGATATCATCAGAAT...TTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp ACGGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCCCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: TGSTTKRSLPSASCSSACPTVWL*RHFSIC
Trigger: ACAGATTGAAAAATGCCTGCACAGCCATACTGTCGG...GCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGACCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RSAACHLRAAPARAGRSGPTVWL*RHFSIC
Trigger: ACAGATTGAAAAATGCCTGCACAGCCATACTGTCGG...TCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCGCCAGAGTGCAATGGTaGAGTCATGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPARVQW*SHGSLQ
Trigger: CTGCAGTGAGCCATGACTGCACCATTGCACTCTGGC...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTCCCCAAACAACCTCTaGCTCGGTCTTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NRFHYRWCQARRLHPLQDSPNNL*LGLASS
Trigger: AGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGA...GTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTCTGATGATGAGGCCCTGCTGGGTTaGAATCAGAGGCGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LLANILQGRGHGVLYSDDEALLG*NQRRLV
Trigger: CACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTC...ATCATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp GGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGGGCAATGTTTCGCTaGCACATGGACAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: GARKPGAVGRRPPRAPPRRAMFR*HMDKRS
Trigger: AGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCT...TCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTVNQEL*EGGLHG
Trigger: CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTAC...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: AQLAICELLQRVQAGAEVDGSCY*FCDDLP
Trigger: TGGAAGATCATCGCAGAACCAGTAACATGACCCATC...CACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCATCACTGCACAAACCCTaGTCAGCTGCACATGACCCC +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGASLHKP*SAAHDP
Trigger: GGGGTCATGTGCAGCTGACCAGGGTTTGTGCAGTGA...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TTCCTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACCCCTGCTTCGGGGCCTaGACCTACCAGTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLFPKQPLPRSCLLWSLNPCFGA*TYQLLE
Trigger: CTCCAGCAACTGGTAGGTCCAGGCCCCGAAGCAGGG...GTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp ACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGGGTGGAGCCTGTGCTTaGAGGGCTTGCTTCATCACC +
Preference number: 4 (lower is better)
Translates to: TGCSSPNRFHYRWCQARRGGACA*RACFIT
Trigger: GGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACC...CCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR TCA 90 bp GGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGAACAGGATGGTGGTGTaGTCGTACAAGTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: GLHHEAQLAICELLQRVQNRMVV*SYKSEI
Trigger: AATTTCTGACTTGTACGATCACACCACCATCCTGTT...CTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp ACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGGTGGAGCGTAGGCTTCACATGTaGCGTCCAAGTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TTDGARHAGFTPCRTRVERRLHM*RPSVSM
Trigger: CATTGAGACACTTGGACGTCACATGTGAAGCCTACG...CTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR GCA 90 bp TCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGTTCCCAGAGGAGATACTaGAGACAGGTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEALLGWNQRRLVVFSPRSQRRY*RQVQAG
Trigger: ACCAGCTTGGACCTGTCTGCAGTATCTCCTCTGGGA...ACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR GCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCGACCTCGTCCATGGCTaGCGCAGGAGCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELDLVHG*RRSQLY
Trigger: GTACAGCTGGCTCCTGCGGCAGCCATGGACGAGGTC...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAGGCTTGAACATCTCTGTGACTaGCACCCTTGGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HLRAAPARAGRSGSDRRLEHLCD*HPWLLN
Trigger: ATTCAGGAGCCAAGGGTGGCAGTCACAGAGATGTTC...AAGCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCCGTGCCATGGTGGCTaGGATGATGCTAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELPCHGG*DDASEP
Trigger: GGGCTCGCTAGCATCATCGCAGCCACCATGGCACGG...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp CAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCGTAAAACACTTCGGCTaGAAACAGGATGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: QLAICELLQRVQAGAEVIVKHFG*KQDGGV
Trigger: CACACCACCATCCTGTTTGCAGCCGAAGTGTTTTAC...GATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAATCATGTTACTGGTTCTaGGATGATCTTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EAQLAICELLQRVQAGAESCYWF*DDLPEL
Trigger: GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGA...TTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAGGTCACTCTCCTGCATaGTCTCACTACAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGAGHSPA*SHYRFS
Trigger: GCTGAACCTGTAGTGAGAGCATGCAGGAGAGTGACC...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCCCCTCTGCCTCGGTCTTaGCTCCTCTGGAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VPQTTSASVLPPLESELSPLPRS*LLWSLN
Trigger: GTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGG...GGACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: LVNQELWEGGLHGLHHEAKISET*PGKRIQ
Trigger: CTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTT...CGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAAAACCCTCATTACCATaGCCACTTCCTGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGAKPSLP*PLPGGD
Trigger: GTCCCCTCCAGGAAGTGGCCATGGTAATGAGGGTTT...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TACCTTGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTATCAGAGGCGGCTCGTaGTCTTCTCACCACGTCCAA +
Preference number: 4 (lower is better)
Translates to: YLVSQRPCWVGIRGGSWSIRGGS*SSHHVQ
Trigger: TTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGAT...AGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp CCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGCTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PVAGGARKPGAVGRRPPRLQTGW*CDRTSQ
Trigger: CTGACTTGTACGATCACACCACCATCCTGTTTGCAG...CCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp ACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGGTGGAGGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: TTDGARHAGFTPCRTRVEAFFNL*ASRESV
Trigger: AACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC...CTCCACCCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp AGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAACHLRAAPARAGRSGSDGSCY*FCDDLP
Trigger: TGGAAGATCATCGCAGAACCAGTAACATGACCCATC...ACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCCAGGCTAGAGTGCAATaGCATGGTCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPQARVQ*HGLGSL
Trigger: CAGTGAGCCAAGACCATGCCATTGCACTCTAGCCTG...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTAGGCGTCTCCAGACATGGTaGCTGCTAAGAACAGGATGT +
Preference number: 4 (lower is better)
Translates to: GSTTDGARHAGFTPCRTRRLQTW*LLRTGC
Trigger: ACATCCTGTTCTTAGCAGCCACCATGTCTGGAGACG...CCTAGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CAA 72 bp ATGGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTaGGAATCAGAGGCGGCTCGTGGTCTTCTCACCACG +
Preference number: 4 (lower is better)
Translates to: MGCTLSLRGPAG*ESEAARGLLTT
Trigger: CGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp CTGCTTGCCAACATCCTCCAGGGGCGTGGCCATGGTGTGCTCTATTCTGATGATCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLANILQGRGHGVLYSDDPSSSS*ASATSW
Trigger: CCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGG...ATCATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp CCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: PVAGGARKPGAVGRRPPRRNFLL*PTEGDL
Trigger: AAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCT...CCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGGAACGTGGCTCGGCTTaGCCCTGGAGCACACATCAC +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRERGSA*PWSTHH
Trigger: GTGATGTGTGCTCCAGGGTCAAGCCGAGCCACGTTC...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGAACCCTGGGAGGAAATaGGGCTTTTGTGCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGNPGRK*GFCAER
Trigger: CCGCTCGGCACAAAAGCCTCATTTCCTCCCAGGGTT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCGGAAGGGAACACCTCTaGGGAAGATCACTGCACAAA +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPGREHL*GRSLHK
Trigger: TTTGTGCAGTGATCTTCCTCAGAGGTGTTCCCTTCC...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGGACAGGAAAACTGGCTaGCCCACGCTGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGDRKTG*PTLFSR
Trigger: ACGGCTGAACAGCGTGGGGCAGCCAGTTTTCCTGTC...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR GCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAATTCTGATGATATCGTaGGGGCTGCCTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGAILMIS*GLPCAS
Trigger: GGAAGCACAAGGCAGCCCGCACGATATCATCAGAAT...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCGCACCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RKPGAVGRRPPRAPPRSAPTVWL*RHFSIC
Trigger: ACAGATTGAAAAATGCCTGCACAGCCATACTGTCGG...TGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGCGCAGCTTGCCATCTaGGAGCTGCTCCAGCGCGTG +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLAQLAI*ELLQRV
Trigger: CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTGCCACAGATGCTGCTaGTGCTCCAGCGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGCHRCC*CSSGNV
Trigger: CACATTCCCGCTGGAGCAGCAGCAGCATCTGTGGCA...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTCTAGGGTGGAGCCTGTaGTTGGAGGGCTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RTRVEPVLGGLASSPLCPLGWSL*LEGLLH
Trigger: ATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAG...AGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp CCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGCATAGAAGCTTGAATTaGGACAGGAAAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVAGGARKPGAVGRRPPRHRSLN*DRKTGC
Trigger: GCAGCCAGTTTTCCTGTCCCAATTCAAGCTTCTATG...CCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCACCATGGCCACTTCCTaGAGGGGACCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSVGESGERFKHSISQVVTMATS*RGPCAA
Trigger: GGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGGT...GACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGAAACCCTCATTACCATaGCCACTTCCTGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: EQSRRRALWRRWVMLLVLKPSLP*PLPGGD
Trigger: GTCCCCTCCAGGAAGTGGCCATGGTAATGAGGGTTT...CAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGGCTTCAGCCACTTCCTaGCCAGTGGTGTCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRASATS*PVVSVP
Trigger: CGGGACTGACACCACTGGCCAGGAAGTGGCTGAAGC...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ATGGTGTGCTCTATTCTGATGATATCGTGCGGGCTGCCTTGTGCTTCCTCTCCCGCTTCAGCCACTTCCTaGCCAGTGGTGTCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: MVCSILMISCGLPCASSPASATS*PVVSVP
Trigger: CGGGACTGACACCACTGGCCAGGAAGTGGCTGAAGC...GGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAGAATAGAGCACACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAATCAGAGGCGGCTCGTaGTCTTCTCACCACGTCCAA +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTIRGGS*SSHHVQ
Trigger: TTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGAT...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCCTGTGCTAGAATCATaGGATGTACCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QLLEALVNQELWEGGLHGPVLES*DVPCLS
Trigger: TGAGAGACAAGGTACATCCCATGATTCTAGCACAGG...CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp AGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTCCAGTGGCAGCCAGGTaGCTGTTGAGGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: RTVETPRLVEAMGHVTGSPVAAR*LLRAMF
Trigger: AAACATTGCCCTCAACAGCCACCTGGCTGCCACTGG...AGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CCA 90 bp GCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAG +
Preference number: 4 (lower is better)
Translates to: APVAGGARKPGAVGRRPPLQTGW*CDRTSQ
Trigger: CTGACTTGTACGATCACACCACCATCCTGTTTGCAG...TGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCTCAGATGGACATGGGTaGACATGGGCTCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPSDGHG*TWALNL
Trigger: CAGGTTTAGAGCCCATGTCCACCCATGTCCATCTGA...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AGGACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTGCCCGTCTCCAGACATaGTGGCTGCTAAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RTRVEPVLGGLASSPLCPARLQT*WLLRTG
Trigger: TCCTGTTCTTAGCAGCCACCATGTCTGGAGACGGGC...AGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp GTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCCCGGTCTTGCCTCCTCTaGAGTCTGAACTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: VPQTTSASVLPPLESELSRSCLL*SLNCPT
Trigger: CGTTGGACAGTTCAGACTCCAGAGGAGGCAAGACCG...GGACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR TCA 90 bp CGCTGTACATCCTCGGAAGAGGTCCTGTCGGAACAGGATGTAGTCTGCCAGGAGATAGAGGTGGACATCTaGCAGCACAGTGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RCTSSEEVLSEQDVVCQEIEVDI*QHSVAP
Trigger: AGGAGCGACACTGTGCTGTCAGATGTCCACCTCTAT...CTCCTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAGCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCTTACTGGTTCTGCGATaGTCTTCCAGAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPLLVLR*SSRAPV
Trigger: AACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAA...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGGTGGGACATAGAGGATaGCAGGAAGGGGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGVGHRG*QEGVEM
Trigger: CATCTCCACCCCTTCCTGTCATCCTCTATGTCCCAC...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTCCCAGAGGAGATACTaGAGACAGGTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KNSRDAAPCGGDGSCYWFSQRRY*RQVQAG
Trigger: ACCAGCTTGGACCTGTCTGCAGTATCTCCTCTGGGA...GAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp AATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCGCTGGAGGGGACCCTGTaGTGCCTGTCTCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NLWASRESVLNTASVKSSLEGTL*CLSQQK
Trigger: CTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAG...CGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp GGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTGGTCTCTCAGAGGCCCTaGTGGGTTGGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GDGSCYWFCDDLPELQLLVSQRP*WVGIRG
Trigger: GCCTCTGATTCCAACCCAGCAGGGCCTCTGAGAGAC...CAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp TCTCAATGTGAAGTTGAGCCTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTCCGTGCCATGGTGGCTaGGATGATGCTAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: SQCEVEPLLHRQYGCAGIPCHGG*DDASEP
Trigger: GGGCTCGCTAGCATCATCGCAGCCACCATGGCACGG...AATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACTCATGTTACTGGTTCTaGGATGATCTTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQLLEALVNQELWEGGLHSCYWF*DDLPEL
Trigger: GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGA...GTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp TTCCTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTTCCACTACAGATGGTaGCAGGCACGCAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FLFPKQPLPRSCLLWSLNFHYRW*QARRLH
Trigger: GTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAA...GTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGCGACTCCCGTCTCTGTaGGACTTAGGCGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLRLPSL*DLGGRH
Trigger: ATGGCGGCCGCCTAAGTCCCACAGAGACGGGAGTCG...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: NSRDAAPCGGDGSCYWFCAFFNL*ASRESV
Trigger: AACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC...GCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp CCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PELQLLEALVNQELWEGGDGSCY*FCDDLP
Trigger: TGGAAGATCATCGCAGAACCAGTAACATGACCCATC...GCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGTTCTCTGGCTACAACTaGGAGGCAGGGACAGACCCC +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRFSGYN*EAGTDP
Trigger: GGGGTCTGTCCCTGCCTCCCAGTTGTAGCCAGAGAA...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGGCAGTGTTGCGATCTTaGCTCACTGCAACCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGAVLRS*LTATFA
Trigger: GGCGAAGGTTGCAGTGAGCCAAGATCGCAACACTGC...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCCAACGGGGATCACCTCTTTGCCCTaGAGTCACCCGCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KQPLPRSCLLWSLNCPTGITSLP*SHPLHS
Trigger: ACTGTGAAGCGGGTGACTCCAGGGCAAAGAGGTGAT...CCCCGTTGGACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CAA 72 bp TCTGTGCAGAGGTCGTCCTTCAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCTCCAGTGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVQRSSFSQSSS*TLTIPPPVAAR
Trigger: CCTGGCTGCCACTGGAGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCTGAAGGACGACCTCTGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR TCA 90 bp AACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCTTACTGGTTCTGCGATaGTCTTCCAGAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: NSRDAAPCGGDGSCYWFCLLVLR*SSRAPV
Trigger: AACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAA...GCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATTGGGTGGAACTGAGCTaGGAAGGAACGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDWVELS*EGTWLG
Trigger: GCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCA...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAGAACATCTCTGTGACTaGCACCCTTGGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTEHLCD*HPWLLN
Trigger: ATTCAGGAGCCAAGGGTGGCAGTCACAGAGATGTTC...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CGGCTGCAAACAGGATGGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTGGAACAGGATGTAGTCTaGCAGGAGCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLQTGWWCDRTSQKFPLVEQDVV*QEQGAP
Trigger: CGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTC...CACAAGAGGAAATTTCTGACTTGTACGATCACACCACCATCCTGTTTGCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GGGCGTGGCCATGGTGTGCTCTATTCTGATGATATCGTGCGGGCTGCCTTGTGCAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: GRGHGVLYSDDIVRAALCKISET*PGKRIQ
Trigger: CTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTT...GCACAAGGCAGCCCGCACGATATCATCAGAATAGAGCACACCATGGCCACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp GCTGTTGAGGGCAATGTTTCGCTGGCACATGGACAAGAGATCTGCACCGACATCATCAGAGGCGGCTCGTaGTCTTCTCACCACGTCCAA +
Preference number: 4 (lower is better)
Translates to: AVEGNVSLAHGQEICTDIIRGGS*SSHHVQ
Trigger: TTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGAT...GATGTCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACATCTCAGAGGCCCTGCTaGGTTGGAATCAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AVQAFFNLWASRESVLNTSQRPC*VGIRGG
Trigger: GCCGCCTCTGATTCCAACCCAGCAGGGCCTCTGAGA...TGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCCCTGTGCTAGAATCATaGGATGTACCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPPVLES*DVPCLS
Trigger: TGAGAGACAAGGTACATCCCATGATTCTAGCACAGG...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GGCAGCCAGGTGGCTGTTGAGGGCAATGTTTCGCTGGCACATGGACAAGAGATCGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: GSQVAVEGNVSLAHGQEIAFFNL*ASRESV
Trigger: AACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC...GATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp ACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: TGCSSPNRFHYRWCQARRSPPTV*LCRHFS
Trigger: TGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGA...CCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAAGGTCCCTGACCTCATaGAGACTTTTTCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGARSLTS*RLFPFW
Trigger: CCAAAAAGGAAAAAGTCTCCATGAGGTCAGGGACCT...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGCATAAAACATGGCAATaGGGGCGCGCTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRHKTWQ*GRAPTL
Trigger: CAGAGTGGGAGCGCGCCCCCATTGCCATGTTTTATG...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp GCTGTTGAGGGCAATGTTTCGCTGGCACATGGACAAGAGATCTGCACCGACATCATAGAGGTGGACATCTaGCAGCACAGTGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVEGNVSLAHGQEICTDIIEVDI*QHSVAP
Trigger: AGGAGCGACACTGTGCTGTCAGATGTCCACCTCTAT...GATGTCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGGACCTTGGGATCTGTaGAGAGGTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLGPWDL*RGRPSA
Trigger: GGCTGAAGGACGACCTCTGCACAGATCCCAAGGTCC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGATCATGTTACTGGTTCTaGGATGATCTTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPELQLLEALVNQELWEGSCYWF*DDLPEL
Trigger: GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGA...TCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCGCGCCCCGCCACACCTaGTTGCCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLAPRHT*LPTSSR
Trigger: CCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGGCGC...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGAATGTCTCCAGGCACTaGCAAATGTTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGNVSRH*QMFLEA
Trigger: TGCCTCCAGGAACATTTGGCAGTGCCTGGAGACATT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGCGATCTTGGCTCACTaGAACCTTCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDAILAH*NLRLPG
Trigger: ACCTGGGAGGCGAAGGTTGCAGTGAGCCAAGATCGC...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCAGGCATGAGCCACCATaGCCGGCACCTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLRHEPP*PAPRLA
Trigger: AGCCAGGCGAGGTGCCGGGCATGGTGGCTCATGCCT...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCATGTAGTGATCTGCAATaGTGCTCCATTATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: DVGGTELRRNVARLDPGACSDLQ*CSIMAS
Trigger: ACTTGCCATAATGGAGCAGCATTGCAGATCACTACA...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGSFASP*EKISET
Trigger: AGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGAGGCCCTGCTGGGTTaGAATCAGAGGCGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGEALLG*NQRRLV
Trigger: CACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTC...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp GGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTGGAGGCGTGTTTCGCTGGCACATaGACAAGAGATCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: GSCYWFCDDLPELQLLEACFAGT*TRDLHR
Trigger: TCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACA...CGCCTCCAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTGTTTCGCTGGCACATaGACAAGAGATCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGCFAGT*TRDLHR
Trigger: TCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACA...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000572956.5
CDS-3UTR CCA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACAAGGGCAATGTTTCGCTaGCACATGGACAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTRAMFR*HMDKRS
Trigger: AGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCT...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCACGGCTGCAAACAGGATaGTGGTGTGATCGTACAAGT +
Preference number: 4 (lower is better)
Translates to: EIHSKNSRDAAPCGGDGSRLQTG*WCDRTS
Trigger: ACTTGTACGATCACACCACCATCCTGTTTGCAGCCG...TGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: DAAPCGGDGSCYWFCDDLSPPTV*LCRHFS
Trigger: TGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGA...AAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GATGATCTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: DDLPELQLLEALVNQELWSPPTV*LCRHFS
Trigger: TGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGA...CCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAGATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGCTCCAGCGGGAATGTaGGAAAAGCACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLAPAGM*EKHRLR
Trigger: CCTGAGCCTGTGCTTTTCCCACATTCCCGCTGGAGC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGCAAGGCCATAAAACATaGCAATGGGGGCGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLQGHKT*QWGRAP
Trigger: GGGAGCGCGCCCCCATTGCCATGTTTTATGGCCTTG...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ACATGGTGGCTGCTAAGAACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGAAGGTTCCACTACAGATaGTGCCAGGCACGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TWWLLRTGCSSPNRFHYRRFHYR*CQARRL
Trigger: AAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCT...TCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGTTCTTAGCAGCCACCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
3UTR CAA 72 bp CGCCTCGGCGCTACTCACATTTTGGGCTGGATCATTTaGTGTTGTGGGGGATGCTCCGTGATTACCGCATTA +
Preference number: 4 (lower is better)
Translates to: RLGATHILGWII*CCGGCSVITAL
Trigger: TAATGCGGTAATCACGGAGCATCCCCCACAACACAAAATGATCCAGCCCAAAATGTGAGTAGCGCCGAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp GTGACGTCCAAGTGTCTCAATGTGAAGTTGAGCCTCTTCTCCACCGACAGTATGCCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: VTSKCLNVKLSLFSTDSMPLVTN*RGPWDL
Trigger: CAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGG...CATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR TCA 90 bp CCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: PRLVEAMGHVTGSAMIFQRNFLL*PTEGDL
Trigger: AAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCT...CTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp CTTCCAGAGCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAAACAGGATGGTGGTGTaGTCGTACAAGTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LPELQLLEALVNQELWEGNRMVV*SYKSEI
Trigger: AATTTCTGACTTGTACGATCACACCACCATCCTGTT...TCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGAAATACAAAGGCCAATaGCAGTCCATTCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRKYKGQ*QSIPGA
Trigger: GGCGCCAGGAATGGACTGGCATTGGCCTTTGTATTT...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCGATTCTGAATATCGCTaGCAAACAAGCACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPDSEYR*QTSTCR
Trigger: TCTACAAGTGCTTGTTTGGCAGCGATATTCAGAATC...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCTGTTTCGCTGGCACATaGACAAGAGATCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELCFAGT*TRDLHR
Trigger: TCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACA...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATCCAGTGGCAGCCAGGTaGCTGTTGAGGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDPVAAR*LLRAMF
Trigger: AAACATTGCCCTCAACAGCCACCTGGCTGCCACTGG...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000572956.5
CDS-3UTR CCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCATCCTCCAGGGGCGTaGCCATGGTGTGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGHPPGA*PWCALF
Trigger: GAATAGAGCACACCATGGCCACGCCCCTGGAGGATG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGCCTCTTCCTTCTCATaGGGCCCTCACCAGAGTGAT +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLASSFS*GPHQSD
Trigger: ATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGGCTCAGGAGTCAGATaGACATGGGTGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGGSGVR*TWVDMG
Trigger: GCCCATGTCCACCCATGTCCATCTGACTCCTGAGCC...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGACAACTCTATTGCTTaGTGCCAATTACATTTATGG +
Preference number: 4 (lower is better)
Translates to: PGPWHEGLANARGMMGLGDNSIA*CQLHLW
Trigger: CCATAAATGTAATTGGCACCAAGCAATAGAGTTGTC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCAGCAGAACATCCCCATaGTTTGGTGATTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPSRTSP*FGDSEY
Trigger: ATATTCAGAATCACCAAACCATGGGGATGTTCTGCT...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGAGCACACAGCTGAAATaGCTGACGTGGGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLSTQLK*LTWVEL
Trigger: CAGTTCCACCCACGTCAGTCATTTCAGCTGTGTGCT...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGGACAAACAAGGTCCCTaGCCTCATGGAGACTTTTTC +
Preference number: 4 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRDKQGP*PHGDFF
Trigger: GAAAAAGTCTCCATGAGGTCAGGGACCTTGTTTGTC...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATTCTCACCTTGCCTTCTaGGTAGTTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDSHLAF*VVGTTG
Trigger: GCCTGTAGTCCCAACTACTCAGAAGGCAAGGTGAGA...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCCCTCTTGTGACCAACTaGAGGGGACCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: QSVGESGERFKHSISQVVPLVTN*RGPWDN
Trigger: ATTATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGG...GACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565866.5
CDS-3UTR GCA 90 bp CACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTCATGTTACCATGGACAAGAGATCTaGACCGACATCTGTACAATA +
Preference number: 4 (lower is better)
Translates to: HSKNSRDAAPCGGDGSCYHGQEI*TDICTI
Trigger: TATTGTACAGATGTCGGTGCAGATCTCTTGTCCATG...GTAACATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR GCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCGTAAAACACTTCGGCTaGAAACAGGATGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELVKHFG*KQDGGV
Trigger: CACACCACCATCCTGTTTGCAGCCGAAGTGTTTTAC...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGCTTCTCAAACTACTGTaGACACAAATCACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGLLKLL*TQITQG
Trigger: ACCCTGGGTGATTTGTGTGCACAGTAGTTTGAGAAG...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp GTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCAAAACCACAACACCTGTaGAGAGGTCGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VQAFFNLWASRESVLNTAKPQHL*RGRPSA
Trigger: GGCTGAAGGACGACCTCTGCACAGGTGTTGTGGTTT...TGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565866.5
CDS-3UTR CCA 90 bp TGTGACGTCCAAGTGTCTCAATGTGAAGTTGAGCCTCTTCTCCACCGACAGTATTTGGGACAGGAAAACTaGCTGCCCCACGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CDVQVSQCEVEPLLHRQYLGQEN*LPHAVQ
Trigger: CTGAACAGCGTGGGGCAGCCAGTTTTCCTGTCCCAA...ATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp GTGAAGTTGAGCCTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTTTTCAATGTGTCAGTCCCGGCCTaGAGGGAGAAACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: VKLSLFSTDSMAVQAFFNVSVPA*REKPSL
Trigger: TAATGAGGGTTTCTCCCTCCAGGCCGGGACTGACAC...ATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp CTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCCTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVEAMGHVTGSAMIFQSSLQTGW*CDRTSQ
Trigger: CTGACTTGTACGATCACACCACCATCCTGTTTGCAG...GGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp TCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCGTCGTAAAACACTTCAGACGCCGCGCCTTGTaGAGGCGATGGGTCATGTTA +
Preference number: 4 (lower is better)
Translates to: SGERFKHSISQVVVVKHFRRRAL*RRWVML
Trigger: TAACATGACCCATCGCCTCCACAAGGCGCGGCGTCT...GAAGTGTTTTACGACGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAACCAGAGTGATGGGGTaGAGCATACCCAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGTRVMG*SIPNPG
Trigger: CCCAGGGTTGGGTATGCTCCACCCCATCACTCTGGT...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCAAGTGCCTGGCCCCTaGCATGAGGGATTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGQVPGP*HEGLAN
Trigger: ATTGGCTAATCCCTCATGCCAGGGGCCAGGCACTTG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGTTCAGCAGCATCTCTaGCCTCACCCACTGGATACT +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLVQQHL*PHPLDT
Trigger: AGTATCCAGTGGGTGAGGCCAGAGATGCTGCTGAAC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 72 bp TCGTCTTCTTCCTGTGCTAGAATCATGGGATGTACCTaGTCTCTCAGAGGCCCTGCTGGGTTGGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: SSSSCARIMGCT*SLRGPAGLESE
Trigger: CTCTGATTCCAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGCACAGGAAGAAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR TCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCTGTTCAGCCGTACCATaGGATGTCTATGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGCSAVP*DVYGSG
Trigger: CCCCGAACCATAGACATCTCATGGTACGGCTGAACA...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR TCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGAACAGGATGGTGGTGTaGTCGTACAAGTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGNRMVV*SYKSEI
Trigger: AATTTCTGACTTGTACGATCACACCACCATCCTGTT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp AATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCGTTACTGGTTCTGCGATaGTCTTCCAGAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: NLWASRESVLNTASVKSSLLVLR*SSRAPV
Trigger: AACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAA...CGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR TCA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGAAAACAGCAATAGGTTaGGGGCTATGTGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLKTAIG*GLCGRP
Trigger: GGGCCTACCACATAGCCCTCAACCTATTGCTGTTTT...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGAACAGGATGTAGTCTaGCAGGAGCAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDAEQDVV*QEQGAP
Trigger: CGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTC...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR GCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGTTGCCATCTGCGAGCTaGTCCAGCGCGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQLPSAS*SSACRQ
Trigger: CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAA...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCATAGGTTTTCTTCTTaGTCCCAGAGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGHRFSS*SQRGRV
Trigger: CACCCTGCCCCTCTGGGAGCAAGAAGAAAACCTATG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp GGCTTCACATGTGACGTCCAAGTGTCTCAATGTGAAGTTGAGCCTCTTCTCCACAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GFTCDVQVSQCEVEPLLHSFASP*EKISET
Trigger: AGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCT...GTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCACATGTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCACCATGGCCACTTCCTaGAGGGGACCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDATMATS*RGPCAA
Trigger: GGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGGT...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp TCCTGTGCTAGAATCATGGGATGTACCTTGTCTCTCAGAGGCCCTGCTGGGTTGCCTGTGCTAGAATCATaGGATGTACCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SCARIMGCTLSLRGPAGLPVLES*DVPCLS
Trigger: TGAGAGACAAGGTACATCCCATGATTCTAGCACAGG...CAACCCAGCAGGGCCTCTGAGAGACAAGGTACATCCCATGATTCTAGCACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CCA 90 bp TCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCGTCGTAAAACACTTCCCAGTGGCAGCCAGGTaGCTGTTGAGGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: SGERFKHSISQVVVVKHFPVAAR*LLRAMF
Trigger: AAACATTGCCCTCAACAGCCACCTGGCTGCCACTGG...GAAGTGTTTTACGACGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCATGCCAGTCCATTCCTaGCGCCAGCTCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLMPVHS*RQLLPL
Trigger: AAGAGGCAGGAGCTGGCGCCAGGAATGGACTGGCAT...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGCATGACCCCAAAGAGTaGCTCTTAGGTTTATTCCAA +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGHDPKE*LLGLFQ
Trigger: TTGGAATAAACCTAAGAGCCACTCTTTGGGGTCATG...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCCCTAGGGATGGAACCTaGGAGCTTGGGGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLPRDGT*ELGEKR
Trigger: TCGCTTCTCCCCAAGCTCCCAGGTTCCATCCCTAGG...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCGTACTGCCAGTTGTTaGCTCTGTCTAGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGRTASC*LCLVGF
Trigger: GAACCCCACTAGACAGAGCCAACAACTGGCAGTACG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAATAGAGGTGGACATCTaGCAGCACAGTGTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGIEVDI*QHSVAP
Trigger: AGGAGCGACACTGTGCTGTCAGATGTCCACCTCTAT...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR GCA 90 bp GTGAAGTTGAGCCTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTTTTCAATACAATAAACGGTCCGTaGCATGGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: VKLSLFSTDSMAVQAFFNTINGP*HGGCDD
Trigger: ATCATCGCAGCCACCATGGCACGGACCGTTTATTGT...ATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp GTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCAGTAAAACACTTCGGCTaGAAACAGGATGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VQAFFNLWASRESVLNTAVKHFG*KQDGGV
Trigger: CACACCACCATCCTGTTTGCAGCCGAAGTGTTTTAC...TGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR GCA 90 bp ACATGGTGGCTGCTAAGAACAGGATGTAGCTCCCCCAACAGGTTCCACTACAGACCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: TWWLLRTGCSSPNRFHYRPTVWL*RHFSIC
Trigger: ACAGATTGAAAAATGCCTGCACAGCCATACTGTCGG...TCTGTAGTGGAACCTGTTGGGGGAGCTACATCCTGTTCTTAGCAGCCACCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGCACAGATGCTGCTGCTaGTCCAGCGGGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLHRCCC*SSGNVG
Trigger: TCCCACATTCCCGCTGGAGCAGCAGCAGCATCTGTG...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGATTGCCCAGGCTAGAGTaGAATGGCATGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGLPRLE*NGMVLA
Trigger: AGCCAAGACCATGCCATTGCACTCTAGCCTGGGCAA...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATTTAGTGCTGACGTACTaGCAGTTGTTGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDLVLTY*QLLALS
Trigger: AGACAGAGCCAACAACTGGCAGTACGTCAGCACTAA...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCATTCAGGGATTATCATaGTACCACACAGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELIQGLS*YHTGKP
Trigger: TGGTTTCCCTGTGTGGTAGCATGATAATCCCTGAAT...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565866.5
CDS-3UTR CCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDKISET*PGKRIQ
Trigger: CTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTT...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp CAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACAGCATCACGGCTGCAAACAGGATaGTGGTGTGATCGTACAAGT +
Preference number: 4 (lower is better)
Translates to: QAFFNLWASRESVLNTASRLQTG*WCDRTS
Trigger: ACTTGTACGATCACACCACCATCCTGTTTGCAGCCG...TGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAAGCAACAACCTTCTCTaGCTACAACTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGSNNLL*LQLGGR
Trigger: CCTGCCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCT...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGGCTCCATAGAAGCTTaGATTGGGACAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGGSIEA*IGTGKL
Trigger: CAGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCC...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR TCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDAPSSSS*ASATSW
Trigger: CCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGG...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGACGTAGGCTTCACATGTaGCGTCCAAGTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGRRLHM*RPSVSM
Trigger: CATTGAGACACTTGGACGTCACATGTGAAGCCTACG...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATCACTACAGGTTCAGCTaGGACCGTTTTTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDHYRFS*DRFSSL
Trigger: TAGAGAAGAAAAACGGTCTCAGCTGAACCTGTAGTG...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGTGTCTAGTGGGGTTCTaGTTTGAAGACTCATTATTA +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGCLVGF*FEDSLL
Trigger: TAATAATGAGTCTTCAAATCAGAACCCCACTAGACA...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCTCCCAGAGGAGATACTaGAGACAGGTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLSQRRY*RQVQAG
Trigger: ACCAGCTTGGACCTGTCTGCAGTATCTCCTCTGGGA...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAGAGGGGACCCTGTGCTaGCTGTCTCAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLEGTLC*LSQQKE
Trigger: CTCCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTC...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATCCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDPTVWL*RHFSIC
Trigger: ACAGATTGAAAAATGCCTGCACAGCCATACTGTCGG...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGATCTGAGGAAGATCACTaGACAAACCCTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGSEEDH*TNPGQL
Trigger: CAGCTGACCAGGGTTTGTGCAGTGATCTTCCTCAGA...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGCATGAAAGGCCCTGGTaGAAAGTGTGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQHERPW*KVCGSS
Trigger: GCTGCTGCCGCACACTTTGCACCAGGGCCTTTCATG...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATTGGGTATCACAAGGCTaGGGACCTCCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDWVSQG*GPPKFV
Trigger: AACAAATTTAGGAGGTCCGCAGCCTTGTGATACCCA...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGTGAGGTCACTCTCCTaGATGCTCTCACTACAGGTT +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGVRSLS*MLSLQV
Trigger: AACCTGTAGTGAGAGCATGCAGGAGAGTGACCTCAC...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATAGTGATCTGCAATGCTaGTCCATTATGGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDSDLQC*SIMASL
Trigger: CAGACTTGCCATAATGGAGCAGCATTGCAGATCACT...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATTTCCCTGTAGTGATCTaGAATGCTGCTCCATTATGG +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDFPVVI*NAAPLW
Trigger: CCATAATGGAGCAGCATTGCAGATCACTACAGGGAA...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGAGCCAGCTGTACCATaGCCCAGGCTCCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDAEPAVP*PRLHLS
Trigger: ACTAAGGTGGAGCCTGGGCCATGGTACAGCTGGCTC...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATCATAGAAGCTTGAATTaGGACAGGAAAACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDHRSLN*DRKTGC
Trigger: GCAGCCAGTTTTCCTGTCCCAATTCAAGCTTCTATG...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGAFFNL*ASRESV
Trigger: AACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR TCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATAACAGGATGGTGGTGTaGTCGTACAAGTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDNRMVV*SYKSEI
Trigger: AATTTCTGACTTGTACGATCACACCACCATCCTGTT...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR GCA 90 bp GTGACGTCCAAGTGTCTCAATGTGAAGTTGAGCCTCTTCTCCACCGACAGTATGCATGGACAAGAGATCTaGACCGACATCTGTACAATA +
Preference number: 4 (lower is better)
Translates to: VTSKCLNVKLSLFSTDSMHGQEI*TDICTI
Trigger: TATTGTACAGATGTCGGTGCAGATCTCTTGTCCATG...CATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR GCA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGAACTCTATTGCTTGGTaGCAATTACATTTATGGACT +
Preference number: 4 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGNSIAW*QLHLWT
Trigger: AGTCCATAAATGTAATTGGCACCAAGCAATAGAGTT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCTTGGGACAGGAAAACTaGCTGCCCCACGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDALGQEN*LPHAVQ
Trigger: CTGAACAGCGTGGGGCAGCCAGTTTTCCTGTCCCAA...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CCA 90 bp TCGGGAGAGCGTTTTAAACACAGCATCAGTCAAGTCGTCGTCGTAAAACACTTCTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SGERFKHSISQVVVVKHFSPPTV*LCRHFS
Trigger: TGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGA...GAAGTGTTTTACGACGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAAGGGTAGCAGGAAGATaGGACCAAAACTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGRVAGR*DQNWRE
Trigger: TTCTCTCCAGTTTTGGTCCCATCTTCCTGCTACCCT...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 72 bp GCCCTAATGCGGCAGGTGAAAGCTGTGACAACTCTATaGCTTGGTGCCAATTACATTTATGGACTTGTACCC +
Preference number: 4 (lower is better)
Translates to: ALMRQVKAVTTL*LGANYIYGLVP
Trigger: GGGTACAAGTCCATAAATGTAATTGGCACCAAGCAATAGAGTTGTCACAGCTTTCACCTGCCGCATTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 72 bp GCCTGGGCTAATTACCTAGCAGAACATCCCCATGGTTaGGTGATTCTGAATATCGCTGCCAAACAAGCACTT +
Preference number: 4 (lower is better)
Translates to: AWANYLAEHPHG*VILNIAAKQAL
Trigger: AAGTGCTTGTTTGGCAGCGATATTCAGAATCACCAAACCATGGGGATGTTCTGCTAGGTAATTAGCCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCTGTTCAGCCGTACCATaGGATGTCTATGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDACSAVP*DVYGSG
Trigger: CCCCGAACCATAGACATCTCATGGTACGGCTGAACA...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR TCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTACCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLPLVTN*RGPWDL
Trigger: CAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGG...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGATGTTGGGCAAGTTGCTaGACCTCTCTGAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGCWASC*TSLNFG
Trigger: TCCAAAATTCAGAGAGGTTCAGCAACTTGCCCAACA...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCCCAACATGCTCAGCCTaGTGTTGCATTTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLPTCSA*CCISNQ
Trigger: CTGGTTAGAAATGCAACATCAGGCTGAGCATGTTGG...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTATTGCCCAGGCCAGAGTaGAATGGTGCAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLLPRPE*NGAVMA
Trigger: AGCCATGACTGCACCATTGCACTCTGGCCTGGGCAA...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAGTGTCAGTCCCGGCCTaGAGGGAGAAACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLVSVPA*REKPSL
Trigger: TAATGAGGGTTTCTCCCTCCAGGCCGGGACTGACAC...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGCCTTGTGGAGGCGATaGGTCATGTTACTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQALWRR*VMLLVL
Trigger: CAGAACCAGTAACATGACCCATCGCCTCCACAAGGC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGGAGCATACCCAACCCTaGGAGGAAATGAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLEHTQP*EEMRLL
Trigger: CAAAAGCCTCATTTCCTCCCAGGGTTGGGTATGCTC...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGGACATGGGTGGACATaGGCTCTAAACCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQGHGWT*ALNLTL
Trigger: CAGAGTCAGGTTTAGAGCCCATGTCCACCCATGTCC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCAATGCTGCTCCATTATaGCAAGTCTGTCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLNAAPL*QVCQER
Trigger: CCGTTCCTGACAGACTTGCCATAATGGAGCAGCATT...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAAACAGGCAACTAAAGTaGCCTCCAGCCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLNRQLK*PPAHSN
Trigger: GTTGCTGTGGGCTGGAGGTCACTTTAGTTGCCTGTT...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCACAATAAACGGTCCGTaGCATGGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDATINGP*HGGCDD
Trigger: ATCATCGCAGCCACCATGGCACGGACCGTTTATTGT...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000572956.5
CDS-3UTR GCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCTCATGTTACTGGTTCTaGGATGATCTTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLSCYWF*DDLPEL
Trigger: GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGA...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATAATAGGGATCACTTCTaGCTTTTAGGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDNRDHF*LLGSLK
Trigger: CTTCAAAGAACCTAAAAGGCAGAAGTGATCCCTATT...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAGGGTCTCGTTGAGATaGAGATTCGGAATCACGTCC +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQRVSLR*RFGITS
Trigger: GGACGTGATTCCGAATCTGCATCTCAACGAGACCCT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGAGGTGTGAGCCACTGTaGCTGGCTTTGTTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLRCEPL*LALLVL
Trigger: TAAAACCAACAAAGCCAGGCACAGTGGCTCACACCT...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGCGGCTGCAAACAGGATaGTGGTGTGATCGTACAAGT +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQRLQTG*WCDRTS
Trigger: ACTTGTACGATCACACCACCATCCTGTTTGCAGCCG...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGAAGGAGAGAGACAGTaGGACATAGAGGATGACAGG +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQEGERQ*DIEDDR
Trigger: CCTGTCATCCTCTATGTCCCACTGTCTCTCTCCTTC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGAGATGGGACCAAAACTaGAGAGAAGGAGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLRWDQN*REGERQ
Trigger: CTGTCTCTCTCCTTCTCTCCAGTTTTGGTCCCATCT...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
3UTR CAA 72 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATaGTCACCATTAGTGCTGACGTACTGCCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARK*SPLVLTYCQLL
Trigger: CAACAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGATTCAACAATATGTGTTaGGCATCTACTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGFNNMC*ASTVCQ
Trigger: CTGGCAAACAGTAGATGCTCAACACATATTGTTGAA...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGTTGCTGAACCTCTCTaGATTTTGGATTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: LILLEIHSKNSRDAAPCGVAEPL*ILDFSC
Trigger: ACATGAGAAATCCAAAATTCAGAGAGGTTCAGCAAC...TCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCCATGGACAAGAGATCTaGACCGACATCTGTACAATA +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLHGQEI*TDICTI
Trigger: TATTGTACAGATGTCGGTGCAGATCTCTTGTCCATG...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCAAATCTCAAGCATGTTaGTTTGGTGAGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGKSQAC*FGELLI
Trigger: AATCAGAAGCTCACCAAAGCAACATGCTTGAGATTT...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTACCAAAGTATCGGGATTaGAGGAGTGAGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLPKYRD*RSEPTC
Trigger: GCATGTTGGCTCACTCCTGCAATCCCGATACTTTGG...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGGACATAAAAGCAGTTTaGCCTAATGCGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLDIKAV*PNAAGE
Trigger: TTCACCTGCCGCATTAGGGCAAACTGCTTTTATGTC...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGCTGCAAACAGGATGGTaGTGTGATCGTACAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQLQTGW*CDRTSQ
Trigger: CTGACTTGTACGATCACACCACCATCCTGTTTGCAG...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAGCATTTTTCAATCTGTaGGCGAGTCGGGAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLAFFNL*ASRESV
Trigger: AACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQSPPTV*LCRHFS
Trigger: TGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGA...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCACTCACATTTTGGGCTaGATCATTTTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLTHILG*IILCCG
Trigger: CCCACAACACAAAATGATCCAGCCCAAAATGTGAGT...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQRNFLL*PTEGDL
Trigger: AAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAATCACGTCCTGAGCTaGGGCTTGATACTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQNHVLS*GLILFF
Trigger: GAAGAAAAGTATCAAGCCTCAGCTCAGGACGTGATT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR TCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGTCCCACTCTGGGAAATaGAAATCTGACGATACTTTG +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLSHSGK*KSDDTL
Trigger: CAAAGTATCGTCAGATTTTCATTTCCCAGAGTGGGA...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAGTAAAACACTTCGGCTaGAAACAGGATGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLVKHFG*KQDGGV
Trigger: CACACCACCATCCTGTTTGCAGCCGAAGTGTTTTAC...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGATGGGTCATGTTACTaGTTCTGCGATGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDADGSCY*FCDDLP
Trigger: TGGAAGATCATCGCAGAACCAGTAACATGACCCATC...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTATTGAGTCCACTGGCCTaGGCTAATTACCTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLLSPLA*ANYLAE
Trigger: TTCTGCTAGGTAATTAGCCCAGGCCAGTGGACTCAA...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCTGCCAATTACATTTATaGACTTGTACCCAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FGELLILLEIHSKNSRDACQLHL*TCTQEC
Trigger: GCACTCCTGGGTACAAGTCCATAAATGTAATTGGCA...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CCA 90 bp ACTGCCAAATGTTCCTGGAGGCAAAATCACTCACAAATAGGAAATAATGACCTAACTGCCAAATGTTCCTaGAGGCAAAATCACTCACAA +
Preference number: 4 (lower is better)
Translates to: TAKCSWRQNHSQIGNNDLTAKCS*RQNHSQ
Trigger: TTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT...TAGGTCATTATTTCCTATTTGTGAGTGATTTTGCCTCCAGGAACATTTGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR GCA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGTTTGGATTTCTCATGTaGAAAATAGGGATCACTTCT +
Preference number: 4 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLFGFLM*KIGITS
Trigger: AGAAGTGATCCCTATTTTGCACATGAGAAATCCAAA...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CACGGGCTCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HGLHHEAQLAICELLQRVTTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...CACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp GGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCATCGAGACGCCGCGCCTaGTGGAGGCGATGGGTCATG +
Preference number: 5 (lower is better)
Translates to: GGARKPGAVGRRPPRAPPSRRRA*WRRWVM
Trigger: CATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGA...TGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS GCA 90 bp GGGGTAGCTCGGTGCAGTGGGCACCACCAGGCAGACCAGACTCCCTaGTTCAGGCCCACTGCTGCCCGGGTGCAGAGTCATGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GVARCSGHHQADQTP*FRPTAARVQSHGGR
Trigger: TCTTCCACCATGACTCTGCACCCGGGCAGCAGTGGGCCTGAAGCAGGGAGTCTGGTCTGCCTGGTGGTGCCCACTGCACCGAGCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS-3UTR CAA 90 bp CAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAAGTGATCTCGAGACGCCGCGCCTaGTGGAGGCGATGGGTCATG +
Preference number: 5 (lower is better)
Translates to: QLAICELLQRVQAGAEVISRRRA*WRRWVM
Trigger: CATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGA...GATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp CAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGAGAGGCCCTGCTGGGTaGGAATCAGAGGCGGCTCGT +
Preference number: 5 (lower is better)
Translates to: QLLEALVNQELWEGGLHGRGPAG*ESEAAR
Trigger: ACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCT...CCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CAA 90 bp AGGCCCTGCTGGGTTGGAATCAGAGGCGGCTCGTGGTCTTCTCACCACGTCCAACCCCGCCACACCTGCTaGCCAACATCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RPCWVGIRGGSWSSHHVQPRHTC*PTSSRG
Trigger: GCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGG...TTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS GCA 90 bp ATCTGCACCGACATCTGTACAATAAACGGTCCGTGCCATGGTGGCTaGGATGATGCTAGCGAGCCCCGTGCCGGCCCCGAGCTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: ICTDICTINGPCHGG*DDASEPRAGPELQR
Trigger: GCGCTGGAGCTCGGGGCCGGCACGGGGCTCGCTAGCATCATCGCAGCCACCATGGCACGGACCGTTTATTGTACAGATGTCGGTGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000564624.1
ENST00000568967.5
ENST00000572956.5
CDS-3UTR CAA 90 bp GGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCCACCACAACTGAAGGGGACCTaGGGATCTGTGCAGAGGTCG +
Preference number: 5 (lower is better)
Translates to: GGARKPGAVGRRPPRAPPQLKGT*GSVQRS
Trigger: CGACCTCTGCACAGATCCCAAGGTCCCCTTCAGTTG...TGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CAA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCTCGAGACGCCGCGCCTaGTGGAGGCGATGGGTCATG +
Preference number: 5 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPSRRRA*WRRWVM
Trigger: CATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGA...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS CCA 90 bp GTAGCGAGTAGCTTTGCATCGCCCTGGGAGAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAGCCGCCGCGGGGCCCAGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: VASSFASPWEKISET*PGKRIQPPRGPAWD
Trigger: ATCCCAGGCTGGGCCCCGCGGCGGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000567295.5
CDS-3UTR CAA 90 bp GCGATGATGCTAGCGAGCCCCGTGCCGGCCCCGAGCTCCAGCGCTGTACATCCTATCATGGGATGTACCTaGTCTCTCAGAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AMMLASPVPAPSSSAVHPIMGCT*SLRGPA
Trigger: AGCAGGGCCTCTGAGAGACAAGGTACATCCCATGAT...AGGATGTACAGCGCTGGAGCTCGGGGCCGGCACGGGGCTCGCTAGCATCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS-3UTR CAA 90 bp GTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTCAACTGAAGGGGACCTaGGGATCTGTGCAGAGGTCG +
Preference number: 5 (lower is better)
Translates to: VAGGARKPGAVGRRPPRAQLKGT*GSVQRS
Trigger: CGACCTCTGCACAGATCCCAAGGTCCCCTTCAGTTG...AGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS-3UTR CAA 90 bp ACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TGSTTDGARHAGFTPCRTTTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...AGTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS TCA 90 bp GCTCGTGGTCTTCTCACCACGTCCAAATCCCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGGCCAGTGGTGTCAGTCCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARGLLTTSKSPSSSS*ASATSWPVVSVPAW
Trigger: CCAGGCCGGGACTGACACCACTGGCCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGGGGATTTGGACGTGGTGAGAAGACCACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000567295.5
CDS CCA 90 bp GAGGTGAGAGTTCCGCTGACACTCGGGACGTCAGCACGGTTCCCGTaGCGCAAAGCTCACCTCTTCTCCACCGACAGTATGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: EVRVPLTLGTSARFP*RKAHLFSTDSMAVQ
Trigger: CTGCACAGCCATACTGTCGGTGGAGAAGAGGTGAGCTTTGCGCCACGGGAACCGTGCTGACGTCCCGAGTGTCAGCGGAACTCTCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS CCA 90 bp CAACAAATGCCCAGTATGTCAGCCCTGGGCCGGGCGCGGTCCAGGTaGCTGCATAGGGGTGAGGAAGAAGGATTCAGTCTAGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QQMPSMSALGRARSR*LHRGEEEGFSLGVE
Trigger: CTCCACCCCTAGACTGAATCCTTCTTCCTCACCCCTATGCAGCCACCTGGACCGCGCCCGGCCCAGGGCTGACATACTGGGCATTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS-3UTR CAA 90 bp GCTCCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACTTCCAGAGCTCCAGTaGCTGGAGGCGCTCGTAAAC +
Preference number: 5 (lower is better)
Translates to: APVAGGARKPGAVGRRPPLPELQ*LEALVN
Trigger: GTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG...TGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp CCAACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACCTCTGCCTCGGTCTaGCCTCCTCTGGAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PTGSTTDGARHAGFTPCRTSASV*PPLESE
Trigger: TTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGT...CCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS TCA 90 bp GCGACTTGCCCGATTCTCCAGCAGGAAGGCACGGGACTCAGAATCTaGCGGCCTGAGTTCCAGCCCTGCCTTTCTCGAGTTCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: ATCPILQQEGTGLRI*RPEFQPCLSRVLLG
Trigger: CCCCAAGAGAACTCGAGAAAGGCAGGGCTGGAACTCAGGCCGTCAGATTCTGAGTCCCGTGCCTTCCTGCTGGAGAATCGGGCAAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS-3UTR CAA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCCAACTGAAGGGGACCTaGGGATCTGTGCAGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPQLKGT*GSVQRS
Trigger: CGACCTCTGCACAGATCCCAAGGTCCCCTTCAGTTG...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp GAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGGAGCGGAATGTCTCAATGTGAAGTaGAGCCTCTTCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: EAQLAICELLQRVQAGAECLNVK*SLFSTD
Trigger: GTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACA...TTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CAA 90 bp TCCACCACGAAGCGCAGCTTGCCATCTGCGAGCTGCTCCAGCGCGTGCAGGCAGTGTCTCAATGTGAAGTaGAGCCTGCAAACCAGCCAG +
Preference number: 5 (lower is better)
Translates to: STTKRSLPSASCSSACRQCLNVK*SLQTSQ
Trigger: CTGGCTGGTTTGCAGGCTCAACTTCACATTGAGACA...CTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572956.5
CDS TCA 90 bp TGGCCCAGGCTCCACCTTAGTCCTAGGACAGGAGTCCCTCAGAGGTaGGAATGGGTCCTCAGCATGGCAGGTCCCAGAGGAGATACTGCA +
Preference number: 5 (lower is better)
Translates to: WPRLHLSPRTGVPQR*EWVLSMAGPRGDTA
Trigger: TGCAGTATCTCCTCTGGGACCTGCCATGCTGAGGACCCATTCTCACCTCTGAGGGACTCCTGTCCTAGGACTAAGGTGGAGCCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
ENST00000564554.1
ENST00000567295.5
CDS TCA 90 bp GGATCTGGGAATGAGGAGGTGACCCAAGGAGCGTCCTCAATGCTCTaGAGCTCTGTGATGCCCAGACGACGCCTGCTCCCCTTACTCACC +
Preference number: 5 (lower is better)
Translates to: GSGNEEVTQGASSML*SSVMPRRRLLPLLT
Trigger: GGTGAGTAAGGGGAGCAGGCGTCGTCTGGGCATCACAGAGCTTCAGAGCATTGAGGACGCTCCTTGGGTCACCTCCTCATTCCCAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS TCA 90 bp GGTGTCAGTCCCGGCCTGGCTGCCCCACGCTGTTCAGCCGTACCATaGGATGTCTATGGTTCGGGGTATAGAGGTGGACATCTGACAGCA +
Preference number: 5 (lower is better)
Translates to: GVSPGLAAPRCSAVP*DVYGSGYRGGHLTA
Trigger: TGCTGTCAGATGTCCACCTCTATACCCCGAACCATAGACATCTCATGGTACGGCTGAACAGCGTGGGGCAGCCAGGCCGGGACTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS CCA 90 bp CACGGTTCCCGTGGCGCAAAGCTCACCTCTTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: HGSRGAKLTSSPPTV*LCRHFSICGRVGRA
Trigger: CGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGTGAGCTTTGCGCCACGGGAACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS-3UTR CAA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGATCATGGGATGTACCTaGTCTCTCAGAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PGPWHEGLANARGMMGLGIMGCT*SLRGPA
Trigger: AGCAGGGCCTCTGAGAGACAAGGTACATCCCATGAT...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp GTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAAGGAGGCCTCCACGGGCTTGTCTCAATGTGAAGTaGAGCCTCTTCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: VAGGARKPGAVGRRPPRACLNVK*SLFSTD
Trigger: GTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACA...AGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CAA 90 bp CTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATGGGACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LEIHSKNSRDAAPCGGDGTTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...CCCATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp GAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTGCCCTGGAGTCACCCGCTGCTTCATCACCTCTTaGCCCTGGAGTCACCCGCTT +
Preference number: 5 (lower is better)
Translates to: EPVLGGLASSPLCPGVTRCFITS*PWSHPL
Trigger: AAGCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCA...GCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS GCA 90 bp ACTAGGGTGGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTaGCCTGGAGTCACCCGCTTCACAGTAAAGCAACCAACGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TRVEPVLGGLASSPL*PGVTRFTVKQPTAL
Trigger: CAGGGCCGTTGGTTGCTTTACTGTGAAGCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CAA 90 bp CCGCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGCTTCCAGAGCTCCAGTaGCTGGAGGCGCTCGTAAAC +
Preference number: 5 (lower is better)
Translates to: PRLVEAMGHVTGSAMIFQLPELQ*LEALVN
Trigger: GTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG...CTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp TTCCTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACGCCTGGACCTACCAGTaGCTGGAGGCGCTCGTAAAC +
Preference number: 5 (lower is better)
Translates to: FLFPKQPLPRSCLLWSLNAWTYQ*LEALVN
Trigger: GTTTACGAGCGCCTCCAGCAACTGGTAGGTCCAGGC...GTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CAA 90 bp CTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTGGGTGGAGCCTGTGCTaGGAGGGCTTGCTTCATCAC +
Preference number: 5 (lower is better)
Translates to: LFPKQPLPRSCLLWSLNCGWSLC*EGLLHH
Trigger: GTGATGAAGCAAGCCCTCCAAGCACAGGCTCCACCC...ACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS TCA 90 bp GCGTGGCCATGGTGTGCTCTTAAGGGCACTCTCCTTTCTTGTGTCTaGCATCCTCGACTCCGGAGTGCAGAGATTCCGAGGTCTACCCGA +
Preference number: 5 (lower is better)
Translates to: AWPWCALKGTLLSCV*HPRLRSAEIPRSTR
Trigger: TCGGGTAGACCTCGGAATCTCTGCACTCCGGAGTCGAGGATGTCAGACACAAGAAAGGAGAGTGCCCTTAAGAGCACACCATGGCCACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS GCA 90 bp GGCCATGGTGTGCTCTATTCTGATGATATCGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTCGTCTTCTTCCTGTGCATGGCCACT +
Preference number: 5 (lower is better)
Translates to: GHGVLYSDDIVRAAL*FLSQDVVFFLCMAT
Trigger: AGTGGCCATGCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAGAATAGAGCACACCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561758.5
CDS CCA 90 bp ACTGCAGACAGGTCCAAGCTGGTAGCGAGTAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACTTGGCCAGGGAAGAGAATCCAGCCG +
Preference number: 5 (lower is better)
Translates to: TADRSKLVASSFASP*EKISETWPGKRIQP
Trigger: CGGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTACCAGCTTGGACCTGTCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000567295.5
CDS CCA 90 bp CTTGCATCTGAGAAAGGGCACTCTGGATGTTTCATGAGGACATCTTaGACGGGTCAACTAAGGAGCTGGGGAGACCAGCTCAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LASEKGHSGCFMRTS*TGQLRSWGDQLRGR
Trigger: GCGGCCCCTGAGCTGGTCTCCCCAGCTCCTTAGTTGACCCGTCCAAGATGTCCTCATGAAACATCCAGAGTGCCCTTTCTCAGATGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS-3UTR CAA 90 bp AACAGGTTCCACTACAGATGGTGCCAGGCACGCAGGCTTCACCCCCTGCAGGACTGTCTCAATGTGAAGTaGAGCCTCTTCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: NRFHYRWCQARRLHPLQDCLNVK*SLFSTD
Trigger: GTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACA...GTCCTGCAGGGGGTGAAGCCTGCGTGCCTGGCACCATCTGTAGTGGAACCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS-3UTR CAA 90 bp GCGCCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTTCCAGAGCTCCAGTaGCTGGAGGCGCTCGTAAAC +
Preference number: 5 (lower is better)
Translates to: APCGGDGSCYWFCDDLPELPELQ*LEALVN
Trigger: GTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG...CTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000565866.5
ENST00000572956.5
CDS TCA 90 bp CGGGAGAGAAAGAGCTGGAGTAGGATGACGCAGTGGATCTGGGAATaGGGAGGTGACCCAAGGAGCGTCCTCAATGCTCTGAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RERKSWSRMTQWIWE*GGDPRSVLNALKLC
Trigger: ACAGAGCTTCAGAGCATTGAGGACGCTCCTTGGGTCACCTCCTCATTCCCAGATCCACTGCGTCATCCTACTCCAGCTCTTTCTCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 90 bp CAGTCCAGTTCTTTGACCCTAACTATACCACCTGTGAGTGAGTCCTaGCCGTGCTGGATGCAGGGCTGGAAAGGAGACTGTCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QSSSLTLTIPPVSES*PCWMQGWKGDCQEE
Trigger: CTCCTCCTGACAGTCTCCTTTCCAGCCCTGCATCCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAGGGTCAAAGAACTGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 90 bp ACTGCAGACAGGTCCAAGCTGGTAGCGAGTAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACTTGGCCAGGGAAGAGAATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: TADRSKLVASSFASP*EKISETWPGKRIQL
Trigger: CAGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTACCAGCTTGGACCTGTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563958.5
CDS-3UTR CAA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDTTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp GTGAAGTTGAGCCTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTTTTCAATTCGAGACGCCGCGCCTaGTGGAGGCGATGGGTCATG +
Preference number: 5 (lower is better)
Translates to: VKLSLFSTDSMAVQAFFNSRRRA*WRRWVM
Trigger: CATGACCCATCGCCTCCACAAGGCGCGGCGTCTCGA...ATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000565866.5
CDS-3UTR CAA 90 bp GACGTGGGTGGAACTGAGCTGAGAAGGAACGTGGCTCGGCTTGACCCTGGAGCAGGCGCTACTCACATTTaGGGCTGGATCATTTTGTGT +
Preference number: 5 (lower is better)
Translates to: DVGGTELRRNVARLDPGAGATHI*GWIILC
Trigger: ACACAAAATGATCCAGCCCAAAATGTGAGTAGCGCC...TGCTCCAGGGTCAAGCCGAGCCACGTTCCTTCTCAGCTCAGTTCCACCCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CCTGGCCCCTGGCATGAGGGATTAGCCAATGCCAGGGGTATGATGGGCCTAGGGGTGATGTTGGGCAAGTaGCTGAACCTCTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: PGPWHEGLANARGMMGLGVMLGK*LNLSEF
Trigger: AAATTCAGAGAGGTTCAGCAACTTGCCCAACATCAC...CCCTAGGCCCATCATACCCCTGGCATTGGCTAATCCCTCATGCCAGGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp ACTAAAGTGACCTCCAGCCCACAGCAACAACCTTCTCTGGCTACAACTGGGAGGGGCAGTGTTGCGATCTaGGCTCACTGCAACCTTCGC +
Preference number: 5 (lower is better)
Translates to: TKVTSSPQQQPSLATTGRGSVAI*AHCNLR
Trigger: GCGAAGGTTGCAGTGAGCCAAGATCGCAACACTGCC...CCTCCCAGTTGTAGCCAGAGAAGGTTGTTGCTGTGGGCTGGAGGTCACTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TTCTTGCTCCCAGAGGGGCAGGGTGAGGTCACTCTCCTGCATGCTCTCACTACATCACCCAGGGTCTCGTaGAGATGCAGATTCGGAATC +
Preference number: 5 (lower is better)
Translates to: FLLPEGQGEVTLLHALTTSPRVS*RCRFGI
Trigger: GATTCCGAATCTGCATCTCAACGAGACCCTGGGTGA...TGTAGTGAGAGCATGCAGGAGAGTGACCTCACCCTGCCCCTCTGGGAGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CTGTTCCCCAAACAACCTCTGCCTCGGTCTTGCCTCCTCTGGAGTCTGAACTGTCTGTGCTTGGAGGGCTaGCTTCATCACCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LFPKQPLPRSCLLWSLNCLCLEG*LHHLFA
Trigger: GGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAG...ACAGTTCAGACTCCAGAGGAGGCAAGACCGAGGCAGAGGTTGTTTGGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS TCA 90 bp CCGTACCATGAGATGTCTATGGTTCGGGGTATAGAGGTGGACATCTaGCAGCACAGTGTCGCTCCTAAAGGTGACCTCGTCCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: PYHEMSMVRGIEVDI*QHSVAPKGDLVHGC
Trigger: GCAGCCATGGACGAGGTCACCTTTAGGAGCGACACTGTGCTGTCAGATGTCCACCTCTATACCCCGAACCATAGACATCTCATGGTACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
ENST00000567295.5
CDS TCA 90 bp CTTCAGCCAGTCCAGTTCTTTGACCCTAACTATACCACCTGTGAGTaGGTCCTGGCCGTGCTGGATGCAGGGCTGGAAAGGAGACTGTCA +
Preference number: 5 (lower is better)
Translates to: LQPVQFFDPNYTTCE*VLAVLDAGLERRLS
Trigger: TGACAGTCTCCTTTCCAGCCCTGCATCCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS GCA 90 bp AGAAACCCTCATTACCATGGCCACTTCCTGGAGGGGACCCTGTGCTaGCTGTCTCAGCAGAAGGAGGCTCCTTTGTGTGAACATCTCTGT +
Preference number: 5 (lower is better)
Translates to: RNPHYHGHFLEGTLC*LSQQKEAPLCEHLC
Trigger: ACAGAGATGTTCACACAAAGGAGCCTCCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGGTAATGAGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS CCA 90 bp ACTGCAGACAGGTCCAAGCTGGTAGCGAGTAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACTTGGCCAGGGAAGAGAATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TADRSKLVASSFASP*EKISETWPGKRIQL
Trigger: AAGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTACCAGCTTGGACCTGTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564554.1
CDS-3UTR CAA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCCCCCGCCACACCTGCTaGCCAACATCCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLPRHTC*PTSSRG
Trigger: GCCCCTGGAGGATGTTGGCAAGCAGGTGTGGCGGGG...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CTGCCTCTTCCTTCTCATGGGGCCCTCACCAGAGTGATGGGGTGGAGCATACCCGCTGTGACAACTCTATaGCTTGGTGCCAATTACATT +
Preference number: 5 (lower is better)
Translates to: LPLPSHGALTRVMGWSIPAVTTL*LGANYI
Trigger: AATGTAATTGGCACCAAGCAATAGAGTTGTCACAGC...GGGTATGCTCCACCCCATCACTCTGGTGAGGGCCCCATGAGAAGGAAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS TCA 90 bp AGCTTGGGCCAGTCCCCAGGACAGAGGCTTACATTTACGGAACACTaGATCCGTGCCAGGCATTACGCTAAGAGCTTTGTATGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SLGQSPGQRLTFTEH*IRARHYAKSFVCAV
Trigger: GACAGCACATACAAAGCTCTTAGCGTAATGCCTGGCACGGATTCAGTGTTCCGTAAATGTAAGCCTCTGTCCTGGGGACTGGCCCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS GCA 90 bp CTGTCTCAGCAGAAGGAGGCTCCTTTGTGTGAACATCTCTGTGACTaGCACCCTTGGCTCCTGAATCTGTCCAAGAGTCTTGGCTCCATA +
Preference number: 5 (lower is better)
Translates to: LSQQKEAPLCEHLCD*HPWLLNLSKSLGSI
Trigger: TATGGAGCCAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGCAGTCACAGAGATGTTCACACAAAGGAGCCTCCTTCTGCTGAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
CDS GCA 90 bp CAATGTGAAGTTGAGCCTGCAAACCAGCCAGTCGGACGCACAAACTaGCATCATCAATGGGAAGGGTTTTGCTGTTTCTGCCCACCTTGC +
Preference number: 5 (lower is better)
Translates to: QCEVEPANQPVGRTN*HHQWEGFCCFCPPC
Trigger: GCAAGGTGGGCAGAAACAGCAAAACCCTTCCCATTGATGATGGCAGTTTGTGCGTCCGACTGGCTGGTTTGCAGGCTCAACTTCACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569597.1
CDS-3UTR CAA 90 bp CCTTGTGGAGGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGAAGGAGGCTCCTTaGTGTGAACATCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: PCGGDGSCYWFCDDLPELQKEAP*CEHLCD
Trigger: GTCACAGAGATGTTCACACAAAGGAGCCTCCTTCTG...GAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCCTCCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS CCA 90 bp GTAGCGAGTAGCTTTGCATCGCCCTGGGAGAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAGCTGGGTAGATGTCATGAAATCTTC +
Preference number: 5 (lower is better)
Translates to: VASSFASPWEKISET*PGKRIQLGRCHEIF
Trigger: GAAGATTTCATGACATCTACCCAGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563958.5
CDS-3UTR CAA 90 bp GGCGATGGGTCATGTTACTGGTTCTGCGATGATCTTCCAGAGCTCCAGTTGCTGAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCT +
Preference number: 5 (lower is better)
Translates to: GDGSCYWFCDDLPELQLLSQSSS*TLTIPP
Trigger: AGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCT...CAGCAACTGGAGCTCTGGAAGATCATCGCAGAACCAGTAACATGACCCATCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000572956.5
CDS GCA 90 bp GGACCTTGGGATCTAAGAAAGAACAAAAGCACACTTTGTGCCCATTaGCTTCTCTCCTGGCCACCAACTCTCACTGGGACTGACCAAAAG +
Preference number: 5 (lower is better)
Translates to: GPWDLRKNKSTLCAH*LLSWPPTLTGTDQK
Trigger: CTTTTGGTCAGTCCCAGTGAGAGTTGGTGGCCAGGAGAGAAGGCAATGGGCACAAAGTGTGCTTTTGTTCTTTCTTAGATCCCAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS-3UTR CAA 90 bp GTGAAGTTGAGCCTCTTCTCCACCGACAGTATGGCTGTGCAGGCATTTTTCAATATCATGGGATGTACCTaGTCTCTCAGAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: VKLSLFSTDSMAVQAFFNIMGCT*SLRGPA
Trigger: AGCAGGGCCTCTGAGAGACAAGGTACATCCCATGAT...ATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CAA 90 bp GCAGGAGCGGAAGTGATCGTAGGCTTCACATGTGACGTCCAAGTGTCTCAATGTAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCT +
Preference number: 5 (lower is better)
Translates to: AGAEVIVGFTCDVQVSQCSQSSS*TLTIPP
Trigger: AGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCT...ACATTGAGACACTTGGACGTCACATGTGAAGCCTACGATCACTTCCGCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CAA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCACCACGAAGCGCAGCTaGCCATCTGCGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FGELLILLEIHSKNSRDATTKRS*PSASCS
Trigger: GGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGT...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000565866.5
ENST00000572956.5
CDS-3UTR CAA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCCTTCCAGAGCTCCAGTaGCTGGAGGCGCTCGTAAAC +
Preference number: 5 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLLPELQ*LEALVN
Trigger: GTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAAG...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCGATCCCCAGAAAACCATCTaGGGTCATCTAAGGTACGTG +
Preference number: 5 (lower is better)
Translates to: LLEIHSKNSRDAAPCGGDPQKTI*GHLRYV
Trigger: CACGTACCTTAGATGACCCAAGATGGTTTTCTGGGG...ATCGCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS CCA 90 bp CTAAGAAAGAACAAAAGCACACTTTGTGCCCATTGCCTTCTCTCCTaGCCACCAACTCTCACTGGGACTGACCAAAAGGCACTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: LRKNKSTLCAHCLLS*PPTLTGTDQKALQE
Trigger: CTCTTGAAGTGCCTTTTGGTCAGTCCCAGTGAGAGTTGGTGGCCAGGAGAGAAGGCAATGGGCACAAAGTGTGCTTTTGTTCTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS-3UTR CAA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGGGAACGTGGCTCGGCTaGACCCTGGAGCACACATCA +
Preference number: 5 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQGTWLG*TLEHTS
Trigger: TGATGTGTGCTCCAGGGTCAAGCCGAGCCACGTTCC...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGAGGAGTGCTAGGAAATaGTCACCATTAGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLRSARK*SPLVLT
Trigger: CGTCAGCACTAATGGTGACAATTTCCTAGCACTCCT...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS TCA 90 bp TCCGTGCCAGGCATTACGCTAAGAGCTTTGTATGTGCTGTCTCTCTaGATTCCTTACAACTGGAGGAGGTTGTACCCCTTGTACAGACAA +
Preference number: 5 (lower is better)
Translates to: SVPGITLRALYVLSL*IPYNWRRLYPLYRQ
Trigger: TTGTCTGTACAAGGGGTACAACCTCCTCCAGTTGTAAGGAATTCAGAGAGACAGCACATACAAAGCTCTTAGCGTAATGCCTGGCACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS-3UTR CAA 90 bp GCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGAGCGTTTTAAACACATGGCTCCATAGAAGCTaGAATTGGGACAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: AVQAFFNLWASRESVLNTWLHRS*NWDRKT
Trigger: AGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCCA...TGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS-3UTR CAA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCAAGATGAAGTTAGACTaGCAAGTGCCTGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLKMKLD*QVPGPW
Trigger: CCAGGGGCCAGGCACTTGCAAGTCTAACTTCATCTT...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp AGACCATACAGCAGGGATGTAGTGATATTTAAGACAAACAAGGTCCCTGACCTCGGTTGCTGTGTGATGTaGGGCAAGTTGCTGAACCTC +
Preference number: 5 (lower is better)
Translates to: RPYSRDVVIFKTNKVPDLGCCVM*GKLLNL
Trigger: GAGGTTCAGCAACTTGCCCAACATCACACAGCAACC...GAGGTCAGGGACCTTGTTTGTCTTAAATATCACTACATCCCTGCTGTATGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGCTGACGTACTGCCAGTaGTTGGCTCTGTCTAGTGGG +
Preference number: 5 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLLTYCQ*LALSSG
Trigger: CCCACTAGACAGAGCCAACAACTGGCAGTACGTCAG...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp GTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGACGTACTGCCAGTTGGAACATCCCCATGGTTaGGTGATTCTGAATATCGCT +
Preference number: 5 (lower is better)
Translates to: VPRSARKLSPLVLTYCQLEHPHG*VILNIA
Trigger: AGCGATATTCAGAATCACCAAACCATGGGGATGTTC...CAACTGGCAGTACGTCAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS TCA 90 bp AGATGTCATGAAATCTTCAGGGCCCCCACTTCTTCAACTGCAAAATaGGGTCATCATGACTCAGGCTGTCCTAATGATCCCAGTACACTG +
Preference number: 5 (lower is better)
Translates to: RCHEIFRAPTSSTAK*GHHDSGCPNDPSTL
Trigger: CAGTGTACTGGGATCATTAGGACAGCCTGAGTCATGATGACCTCATTTTGCAGTTGAAGAAGTGGGGGCCCTGAAGATTTCATGACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563037.1
ENST00000563958.5
CDS TCA 90 bp AAACAGGATGGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTTGGGATAGAAAGGGCACAGTACTAC +
Preference number: 5 (lower is better)
Translates to: KQDGGVIVQVRNFLL*PTEGDLGIERAQYY
Trigger: GTAGTACTGTGCCCTTTCTATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACCATCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564107.1
CDS-3UTR CAA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCCTGTGCCTGGCTTTGTaGGTTTTAACAGTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGLCLAL*VLTVLS
Trigger: GGAAAGAACTGTTAAAACCAACAAAGCCAGGCACAG...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCACGTACTGCCAGTTGTaGGCTCTGTCTAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: FGELLILLEIHSKNSRDATYCQL*ALSSGV
Trigger: AACCCCACTAGACAGAGCCAACAACTGGCAGTACGT...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCCAGAAGGAGGCTCCTTaGTGTGAACATCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: FGELLILLEIHSKNSRDAQKEAP*CEHLCD
Trigger: GTCACAGAGATGTTCACACAAAGGAGCCTCCTTCTG...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS-3UTR CAA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGTGTCTCAATGTGAAGTaGAGCCTCTTCTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQCLNVK*SLFSTD
Trigger: GTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACA...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp ATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCGCGCCTTGTGGAGGCTCTTCTCTAAAGTACTaGGCTTTCTTCTTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: ILLEIHSKNSRDAAPCGGSSLKY*AFFFQV
Trigger: GACTTGGAAGAAGAAAGCCAAGTACTTTAGAGAAGA...GCCTCCACAAGGCGCGGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS TCA 90 bp TGGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTAAGAAAGAACAAAAGCACACTTTGT +
Preference number: 5 (lower is better)
Translates to: WWCDRTSQKFPLVTN*RGPWDLRKNKSTLC
Trigger: ACAAAGTGTGCTTTTGTTCTTTCTTAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS-3UTR CAA 90 bp TACATTTATGGACTTGTACCCAGGAGTGCTAGGAAATTGTCACCATTAGTGCTGTGGCTCCATAGAAGCTaGAATTGGGACAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: YIYGLVPRSARKLSPLVLWLHRS*NWDRKT
Trigger: AGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCCA...CAGCACTAATGGTGACAATTTCCTAGCACTCCTGGGTACAAGTCCATAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCT +
Preference number: 5 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQSQSSS*TLTIPP
Trigger: AGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCT...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp TTTGGTGAGCTTCTGATTTTACTAGAAATACACTCTAAGAACAGTCGAGACGCCATTACATTTATGGACTaGTACCCAGGAGTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: FGELLILLEIHSKNSRDAITFMD*YPGVLG
Trigger: TCCTAGCACTCCTGGGTACAAGTCCATAAATGTAAT...GGCGTCTCGACTGTTCTTAGAGTGTATTTCTAGTAAAATCAGAAGCTCACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS CCA 90 bp ATGCTAGCTTTCCTACTCAACACCATAAAGCCATCAAAATGCAAGTaGGTTGTAAAGAAAGTCTGTGAATCTGGCAAATCAATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: MLAFLLNTIKPSKCK*VVKKVCESGKSMQN
Trigger: ATTCTGCATTGATTTGCCAGATTCACAGACTTTCTTTACAACCCACTTGCATTTTGATGGCTTTATGGTGTTGAGTAGGAAAGCTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563037.1
CDS-3UTR CAA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGCCAAACGTACCTGATTaGGGTGATAAAGAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQPNVPD*GDKELK
Trigger: TTTTAACTCTTTATCACCCAAATCAGGTACGTTTGG...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS-3UTR CAA 90 bp CCATTATGGCAAGTCTGTCAGGAACGGAGTTTGTGTAGGAATTTTAGAAAACAGTGTCAGGAACGGAGTTaGTGTAGGAATTTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: PLWQVCQERSLCRNFRKQCQERS*CRNFRK
Trigger: TTTTCTAAAATTCCTACACAAACTCCGTTCCTGACA...CTGTTTTCTAAAATTCCTACACAAACTCCGTTCCTGACAGACTTGCCATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381920.8
CDS CCA 72 bp GGGCCCCCACTTCTTCAACCGCCGCGGGGCCCAGCCTaGGATCCCACCCGACTCCCGTCTCTGTGGGACTTA +
Preference number: 6 (lower is better)
Translates to: GPPLLQPPRGPA*DPTRLPSLWDL
Trigger: TAAGTCCCACAGAGACGGGAGTCGGGTGGGATCCCAGGCTGGGCCCCGCGGCGGTTGAAGAAGTGGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564554.1
CDS GCA 72 bp CGGTGCAGTGGGCACCACCAGGCAGACCAGACTCCCTaGTTCAGGCCCACTGCTGCCCGGGTGCAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: RCSGHHQADQTP*FRPTAARVQSH
Trigger: ATGACTCTGCACCCGGGCAGCAGTGGGCCTGAAGCAGGGAGTCTGGTCTGCCTGGTGGTGCCCACTGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS GCA 72 bp CCACCAGGCAGACCAGACTCCCTGCTTCAGGCCCACTaGTGCCCGGGTGCAGAGTCATGGTGGAAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: PPGRPDSLLQAH*CPGAESWWKRC
Trigger: GCACCTCTTCCACCATGACTCTGCACCCGGGCAGCAGTGGGCCTGAAGCAGGGAGTCTGGTCTGCCTGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS CCA 72 bp AGGCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCG +
Preference number: 6 (lower is better)
Translates to: RQLLEALVNQEL*EGGLHGLHHEA
Trigger: CGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562151.2
CDS GCA 72 bp CACAGTGTCGCTCCTAAAGGTGACCTCGTCCATGGCTaGCGCAGGAGCCAGCTGTACCATGGCCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: HSVAPKGDLVHG*RRSQLYHGPGS
Trigger: GGAGCCTGGGCCATGGTACAGCTGGCTCCTGCGGCAGCCATGGACGAGGTCACCTTTAGGAGCGACACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
ENST00000567295.5
CDS GCA 72 bp GTGATGCCCAGACGACGCCTGCTCCCCTTACTCACCTaGTGCAAGGGACACAGACGGAGCCCTGCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: VMPRRRLLPLLT*CKGHRRSPASQ
Trigger: TTGGGAGGCAGGGCTCCGTCTGTGTCCCTTGCAGCAGGTGAGTAAGGGGAGCAGGCGTCGTCTGGGCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 72 bp CCTCGTCCATGGCTGCCGCAGGAGCCAGCTGTACCATaGCCCAGGCTCCACCTTAGTCCTAGGACAGGAGTC +
Preference number: 6 (lower is better)
Translates to: PRPWLPQEPAVP*PRLHLSPRTGV
Trigger: GACTCCTGTCCTAGGACTAAGGTGGAGCCTGGGCCATGGTACAGCTGGCTCCTGCGGCAGCCATGGACGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
ENST00000564554.1
ENST00000567295.5
CDS CCA 72 bp TACCAGTTGCTGGAGGCGCTCGTAAACCAGGAGCTGTaGGAAGGAGGCCTCCACGGGCTCCACCACGAAGCG +
Preference number: 6 (lower is better)
Translates to: YQLLEALVNQEL*EGGLHGLHHEA
Trigger: CGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS GCA 72 bp GACATCTGTACAATAAACGGTCCGTGCCATGGTGGCTaGGATGATGCTAGCGAGCCCCGTGCCGGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: DICTINGPCHGG*DDASEPRAGPE
Trigger: CTCGGGGCCGGCACGGGGCTCGCTAGCATCATCGCAGCCACCATGGCACGGACCGTTTATTGTACAGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000564624.1
ENST00000568967.5
ENST00000572956.5
CDS CCA 72 bp AGCTTTGCATCGCCCTGGGAGAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAGCCGCCGCGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: SFASPWEKISET*PGKRIQPPRGP
Trigger: TGGGCCCCGCGGCGGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000567295.5
CDS CCA 72 bp CCCAGTATGTCAGCCCTGGGCCGGGCGCGGTCCAGGTaGCTGCATAGGGGTGAGGAAGAAGGATTCAGTCTA +
Preference number: 6 (lower is better)
Translates to: PSMSALGRARSR*LHRGEEEGFSL
Trigger: TAGACTGAATCCTTCTTCCTCACCCCTATGCAGCCACCTGGACCGCGCCCGGCCCAGGGCTGACATACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS CCA 72 bp GTCAGAGATCACAACAAATGCCCAGTATGTCAGCCCTaGGCCGGGCGCGGTCCAGGTGGCTGCATAGGGGTG +
Preference number: 6 (lower is better)
Translates to: VRDHNKCPVCQP*AGRGPGGCIGV
Trigger: CACCCCTATGCAGCCACCTGGACCGCGCCCGGCCCAGGGCTGACATACTGGGCATTTGTTGTGATCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS CAA 72 bp AACCAACGGCCCTGCTTCGGGGCCTGGACCTACCAGTaGCTGGAGGCGCTCGTAAACCAGGAGCTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: NQRPCFGAWTYQ*LEALVNQELWE
Trigger: TTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGTAGGTCCAGGCCCCGAAGCAGGGCCGTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS GCA 72 bp ACCAGACTCCCTGCTTCAGGCCCACTGCTGCCCGGGTaGAGAGTCATGGTGGAAGAGGTGCCTTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: TRLPASGPLLPG*RVMVEEVPFLL
Trigger: CAGCAGAAAAGGCACCTCTTCCACCATGACTCTGCACCCGGGCAGCAGTGGGCCTGAAGCAGGGAGTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS CCA 72 bp TACACTGCTGGAGTTCCTACATTTAAGTGGTTGCTGTaGGGCAGCAAAAGCCGCCGCGGGGCCCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: YTAGVPTFKWLL*GSKSRRGAQPG
Trigger: CCCAGGCTGGGCCCCGCGGCGGCTTTTGCTGCCCCACAGCAACCACTTAAATGTAGGAACTCCAGCAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563958.5
CDS CCA 72 bp GTTCCGCTGACACTCGGGACGTCAGCACGGTTCCCGTaGCGCAAAGCTCACCTCTTCTCCACCGACAGTATG +
Preference number: 6 (lower is better)
Translates to: VPLTLGTSARFP*RKAHLFSTDSM
Trigger: CATACTGTCGGTGGAGAAGAGGTGAGCTTTGCGCCACGGGAACCGTGCTGACGTCCCGAGTGTCAGCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS CCA 72 bp CAGGACGTCGTCTTCTTCCTGTGCATGGCCACTTCCTaGAGGGGACCCTGTGCTGCCTGTCTCAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QDVVFFLCMATS*RGPCAACLSRR
Trigger: CCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGCACAGGAAGAAGACGACGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561758.5
CDS TCA 72 bp AATGAGGAGGTGACCCAAGGAGCGTCCTCAATGCTCTaGAGCTCTGTGATGCCCAGACGACGCCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: NEEVTQGASSML*SSVMPRRRLLP
Trigger: GGGGAGCAGGCGTCGTCTGGGCATCACAGAGCTTCAGAGCATTGAGGACGCTCCTTGGGTCACCTCCTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS TCA 72 bp CCCGGCCTGGCTGCCCCACGCTGTTCAGCCGTACCATaGGATGTCTATGGTTCGGGGTATAGAGGTGGACAT +
Preference number: 6 (lower is better)
Translates to: PGLAAPRCSAVP*DVYGSGYRGGH
Trigger: ATGTCCACCTCTATACCCCGAACCATAGACATCTCATGGTACGGCTGAACAGCGTGGGGCAGCCAGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567295.5
CDS GCA 72 bp TCTCCTTTCTTGTGTCTGACATCCTCGACTCCGGAGTaGAGAGATTCCGAGGTCTACCCGACCCCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: SPFLCLTSSTPE*RDSEVYPTPAP
Trigger: CGGGGCAGGGGTCGGGTAGACCTCGGAATCTCTGCACTCCGGAGTCGAGGATGTCAGACACAAGAAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS CCA 72 bp CTGGAGGGAGAAACCCTCATTACCATGGCCACTTCCTaGAGGGGACCCTGTGCTGCCTGTCTCAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: LEGETLITMATS*RGPCAACLSRR
Trigger: CCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGGTAATGAGGGTTTCTCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS CCA 72 bp TCAGCCACTTCCTGGCCAGTGGTGTCAGTCCCGGCCTaGAGGGAGAAACCCTCATTACCATGGCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: SATSWPVVSVPA*REKPSLPWPLP
Trigger: AGGAAGTGGCCATGGTAATGAGGGTTTCTCCCTCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS CAA 90 bp CGTGGCCATGGTGTGCTCTATTCTGATGATATCGTGCGGGCTGCCTaGTGCTTCCTCTCCCAGGACGTCGTCTTCTTCCTGTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: RGHGVLYSDDIVRAA*CFLSQDVVFFLCMA
Trigger: GGCCATGCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAGAATAGAGCACACCATGGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561758.5
CDS TCA 72 bp GGTGCAGAGTCATGGTGGAAGAGGTGCCTTTTCTGCTaGGTGTCTGCTCTAGCCAGTGAGCAGCGGGCGGAT +
Preference number: 6 (lower is better)
Translates to: GAESWWKRCLFC*VSALASEQRAD
Trigger: ATCCGCCCGCTGCTCACTGGCTAGAGCAGACACTCAGCAGAAAAGGCACCTCTTCCACCATGACTCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS TCA 72 bp CCGATTCTCCAGCAGGAAGGCACGGGACTCAGAATCTaGCGGCCTGAGTTCCAGCCCTGCCTTTCTCGAGTT +
Preference number: 6 (lower is better)
Translates to: PILQQEGTGLRI*RPEFQPCLSRV
Trigger: AACTCGAGAAAGGCAGGGCTGGAACTCAGGCCGTCAGATTCTGAGTCCCGTGCCTTCCTGCTGGAGAATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS TCA 72 bp CTTCTCACCACGTCCAAATCCCCATCCTCATCCAGCTaGGCTTCAGCCACTTCCTGGCCAGTGGTGTCAGTC +
Preference number: 6 (lower is better)
Translates to: LLTTSKSPSSSS*ASATSWPVVSV
Trigger: GACTGACACCACTGGCCAGGAAGTGGCTGAAGCTCAGCTGGATGAGGATGGGGATTTGGACGTGGTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000567295.5
CDS GCA 72 bp CATTACCATGGCCACTTCCTGGAGGGGACCCTGTGCTaGCTGTCTCAGCAGAAGGAGGCTCCTTTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: HYHGHFLEGTLC*LSQQKEAPLCE
Trigger: TTCACACAAAGGAGCCTCCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATGGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000163678.11
ENST00000381920.8
CDS GCA 72 bp GAGATCTGCACCGACATCTGTACAATAAACGGTCCGTaGCATGGTGGCTGCGATGATGCTAGCGAGCCCCGT +
Preference number: 6 (lower is better)
Translates to: EICTDICTINGP*HGGCDDASEPR
Trigger: ACGGGGCTCGCTAGCATCATCGCAGCCACCATGGCACGGACCGTTTATTGTACAGATGTCGGTGCAGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000564624.1
ENST00000568967.5
ENST00000572956.5
CDS GCA 72 bp ACCCTAACTATACCACCTGTGAGTGAGTCCTGGCCGTaGTGGATGCAGGGCTGGAAAGGAGACTGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: TLTIPPVSESWP*WMQGWKGDCQE
Trigger: CTCCTGACAGTCTCCTTTCCAGCCCTGCATCCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 72 bp CTAACTATACCACCTGTGAGTGAGTCCTGGCCGTGCTaGATGCAGGGCTGGAAAGGAGACTGTCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LTIPPVSESWPC*MQGWKGDCQEE
Trigger: CTCCTCCTGACAGTCTCCTTTCCAGCCCTGCATCCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CAA 72 bp GGAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTaGCCCTGGAGTCACCCGCTTCACAGTAAAGCAACC +
Preference number: 6 (lower is better)
Translates to: GACAWRACFITS*PWSHPLHSKAT
Trigger: GGTTGCTTTACTGTGAAGCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS CAA 72 bp GGGCAGGAGCGGACGGGCGGCTTCCTCCTTTCTTTGTaGCTCTGGGCTGTTCTATTTTACTGTGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GQERTGGFLLSL*LWAVLFYCGRE
Trigger: CTCTCTGCCACAGTAAAATAGAACAGCCCAGAGCAACAAAGAAAGGAGGAAGCCGCCCGTCCGCTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562151.2
CDS CAA 72 bp CTGGGGCAGGAGCGGACGGGCGGCTTCCTCCTTTCTTaGTTGCTCTGGGCTGTTCTATTTTACTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: LGQERTGGFLLS*LLWAVLFYCGR
Trigger: TCTGCCACAGTAAAATAGAACAGCCCAGAGCAACAAAGAAAGGAGGAAGCCGCCCGTCCGCTCCTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562151.2
CDS CAA 90 bp ACCTTGGGATCTGTGCAGAGGTCGTCCTTCAGCCAGTCCAGTTCTTaGACCCTAACTATACCACCTGTGAGTGAGTCCTGGCCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TLGSVQRSSFSQSSS*TLTIPPVSESWPCW
Trigger: CCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCTGAAGGACGACCTCTGCACAGATCCCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS TCA 72 bp GTCCAGTTCTTTGACCCTAACTATACCACCTGTGAGTaGGTCCTGGCCGTGCTGGATGCAGGGCTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: VQFFDPNYTTCE*VLAVLDAGLER
Trigger: CCTTTCCAGCCCTGCATCCAGCACGGCCAGGACTCACTCACAGGTGGTATAGTTAGGGTCAAAGAACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS GCA 72 bp CACACCTATTCTGATGATATCGTGCGGGCTGCCTTGTaGTTCCTCTCCCAGGACGTCGTCTTCTTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: HTYSDDIVRAAL*FLSQDVVFFLC
Trigger: GCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAGAATAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000163678.11
CDS GCA 72 bp GAGCCTGTGCTTGGAGGGCTTGCTTCATCACCTCTTTaGCCTGGAGTCACCCGCTTCACAGTAAAGCAACCA +
Preference number: 6 (lower is better)
Translates to: EPVLGGLASSPL*PGVTRFTVKQP
Trigger: TGGTTGCTTTACTGTGAAGCGGGTGACTCCAGGGCAAAGAGGTGATGAAGCAAGCCCTCCAAGCACAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562973.1
CDS CCA 72 bp AGGTCCAAGCTGGTAGCGAGTAGCTTTGCATCGCCCTaGGAGAAGATCTCAGAGACTTGGCCAGGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RSKLVASSFASP*EKISETWPGKR
Trigger: TCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCTACTCGCTACCAGCTTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563037.1
ENST00000563958.5
ENST00000564554.1
ENST00000567295.5
CDS CCA 72 bp CGTGGCGCAAAGCTCACCTCTTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: RGAKLTSSPPTV*LCRHFSICGRV
Trigger: GACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGTGAGCTTTGCGCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS CAA 72 bp CAGACAAGGAAACTGAACTCAGAGAGGCTAAGCGACTaGCCCGATTCTCCAGCAGGAAGGCACGGGACTCAG +
Preference number: 6 (lower is better)
Translates to: QTRKLNSERLSD*PDSPAGRHGTQ
Trigger: CTGAGTCCCGTGCCTTCCTGCTGGAGAATCGGGCAAGTCGCTTAGCCTCTCTGAGTTCAGTTTCCTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS CAA 90 bp CCCCTTGTACAGACAAGGAAACTGAACTCAGAGAGGCTAAGCGACTaGCCCGATTCTCCAGCAGGAAGGCACGGGACTCAGAATCTGACG +
Preference number: 6 (lower is better)
Translates to: PLVQTRKLNSERLSD*PDSPAGRHGTQNLT
Trigger: CGTCAGATTCTGAGTCCCGTGCCTTCCTGCTGGAGAATCGGGCAAGTCGCTTAGCCTCTCTGAGTTCAGTTTCCTTGTCTGTACAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS TCA 72 bp TGGTGTGCTCTTAAGGGCACTCTCCTTTCTTGTGTCTaGCATCCTCGACTCCGGAGTGCAGAGATTCCGAGG +
Preference number: 6 (lower is better)
Translates to: WCALKGTLLSCV*HPRLRSAEIPR
Trigger: CCTCGGAATCTCTGCACTCCGGAGTCGAGGATGTCAGACACAAGAAAGGAGAGTGCCCTTAAGAGCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS GCA 72 bp GCAAAGCTCACCTCTTCTCCACCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: AKLTSSPPTVWL*RHFSICGRVGR
Trigger: TCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGGTGAGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS GCA 72 bp CAAGTGGGACAGCAGCGCCTGCACACAGGGCTAGGATaGAGATTCAGTGCAGTAACGTACACAAAGGATGAG +
Preference number: 6 (lower is better)
Translates to: QVGQQRLHTGLG*RFSAVTYTKDE
Trigger: CTCATCCTTTGTGTACGTTACTGCACTGAATCTGCATCCTAGCCCTGTGTGCAGGCGCTGCTGTCCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS GCA 72 bp GGACGCACAAACTCTTCTCCACCGACAGTATGGCTGTaGAGGCATTTTTCAATCTGTGGGCGAGTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: GRTNSSPPTVWL*RHFSICGRVGR
Trigger: TCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGTTTGTGCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572956.5
CDS CCA 72 bp GAGAAAGGGCACTCTGGATGTTTCATGAGGACATCTTaGACGGGTCAACTAAGGAGCTGGGGAGACCAGCTC +
Preference number: 6 (lower is better)
Translates to: EKGHSGCFMRTS*TGQLRSWGDQL
Trigger: GAGCTGGTCTCCCCAGCTCCTTAGTTGACCCGTCCAAGATGTCCTCATGAAACATCCAGAGTGCCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 72 bp ATGACGCCCCTGGGAGGTTTTCAGCAGCAAGTGAAGTaGACTGGCTTGCATCTGAGAAAGGGCACTCTGGAT +
Preference number: 6 (lower is better)
Translates to: MTPLGGFQQQVK*TGLHLRKGTLD
Trigger: ATCCAGAGTGCCCTTTCTCAGATGCAAGCCAGTCCACTTCACTTGCTGCTGAAAACCTCCCAGGGGCGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563501.1
CDS CCA 72 bp CCAGTCGGACGCACAAACTCTTCTCCACCGACAGTATaGCTGTGCAGGCATTTTTCAATCTGTGGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: PVGRTNSSPPTV*LCRHFSICGRV
Trigger: GACTCGCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGTGGAGAAGAGTTTGTGCGTCCGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572956.5
CDS TCA 72 bp GAGATGTCTATGGTTCGGGGTATAGAGGTGGACATCTaGCAGCACAGTGTCGCTCCTAAAGGTGACCTCGTC +
Preference number: 6 (lower is better)
Translates to: EMSMVRGIEVDI*QHSVAPKGDLV
Trigger: GACGAGGTCACCTTTAGGAGCGACACTGTGCTGTCAGATGTCCACCTCTATACCCCGAACCATAGACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
ENST00000567295.5
CDS GCA 72 bp GTTGAGCCTGCAAACCAGCCAGTCGGACGCACAAACTaGCATCATCAATGGGAAGGGTTTTGCTGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: VEPANQPVGRTN*HHQWEGFCCFC
Trigger: GCAGAAACAGCAAAACCCTTCCCATTGATGATGGCAGTTTGTGCGTCCGACTGGCTGGTTTGCAGGCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569597.1
CDS CCA 72 bp AGCTTTGCATCGCCCTGGGAGAAGATCTCAGAGACTTaGCCAGGGAAGAGAATCCAGCTGGGTAGATGTCAT +
Preference number: 6 (lower is better)
Translates to: SFASPWEKISET*PGKRIQLGRCH
Trigger: ATGACATCTACCCAGCTGGATTCTCTTCCCTGGCCAAGTCTCTGAGATCTTCTCCCAGGGCGATGCAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563958.5
CDS CAA 72 bp CCTGAATCTGTCCAAGAGTCTTGGCTCCATAGAAGCTaGAATTGGGACAGGAAAACTGGCTGCCCCACGCTG +
Preference number: 6 (lower is better)
Translates to: PESVQESWLHRS*NWDRKTGCPTL
Trigger: CAGCGTGGGGCAGCCAGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCCAAGACTCTTGGACAGATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
CDS CAA 90 bp CCAGCCAGTCGGACGCACAAACTGCCATCATCAATGGGAAGGGTTTaGCTGTTTCTGCCCACCTTGCTTTCCTATCCCTCACTGATCTCA +
Preference number: 6 (lower is better)
Translates to: PASRTHKLPSSMGRV*LFLPTLLSYPSLIS
Trigger: TGAGATCAGTGAGGGATAGGAAAGCAAGGTGGGCAGAAACAGCAAAACCCTTCCCATTGATGATGGCAGTTTGTGCGTCCGACTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569597.1
CDS CAA 90 bp CAACTGAAGGGGACCTTGGGATCTAAGAAAGAACAAAAGCACACTTaGTGCCCATTGCCTTCTCTCCTGGCCACCAACTCTCACTGGGAC +
Preference number: 6 (lower is better)
Translates to: QLKGTLGSKKEQKHT*CPLPSLLATNSHWD
Trigger: GTCCCAGTGAGAGTTGGTGGCCAGGAGAGAAGGCAATGGGCACAAAGTGTGCTTTTGTTCTTTCTTAGATCCCAAGGTCCCCTTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS CAA 90 bp GCAGAGATTCCGAGGTCTACCCGACCCCTGCCCCGTTTCAGGCACTaGCTAGTGTTCGAATGGGTAAATATGCTTCTTCATGACTCATCA +
Preference number: 6 (lower is better)
Translates to: AEIPRSTRPLPRFRH*LVFEWVNMLLHDSS
Trigger: TGATGAGTCATGAAGAAGCATATTTACCCATTCGAACACTAGCAAGTGCCTGAAACGGGGCAGGGGTCGGGTAGACCTCGGAATCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS TCA 72 bp CTGAATCTGTCCAAGAGTCTTGGCTCCATAGAAGCTTaGATTGGGACAGGAAAACTGGCTGCCCCACGCTGT +
Preference number: 6 (lower is better)
Translates to: LNLSKSLGSIEA*IGTGKLAAPRC
Trigger: ACAGCGTGGGGCAGCCAGTTTTCCTGTCCCAATTCAAGCTTCTATGGAGCCAAGACTCTTGGACAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
ENST00000563958.5
CDS GCA 72 bp GGACGCACAAACTGCCATCATCAATGGGAAGGGTTTTaGTGTTTCTGCCCACCTTGCTTTCCTATCCCTCAC +
Preference number: 6 (lower is better)
Translates to: GRTNCHHQWEGF*CFCPPCFPIPH
Trigger: GTGAGGGATAGGAAAGCAAGGTGGGCAGAAACAGCAAAACCCTTCCCATTGATGATGGCAGTTTGTGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569597.1
CDS CCA 72 bp GCTCCTTTGTGTGAACATCTCTGTGACTGCCACCCTTaGCTCCTGAATCTGTCCAAGAGTCTTGGCTCCATA +
Preference number: 6 (lower is better)
Translates to: APLCEHLCDCHP*LLNLSKSLGSI
Trigger: TATGGAGCCAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGCAGTCACAGAGATGTTCACACAAAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000163678.11
ENST00000381920.8
ENST00000561758.5
CDS CAA 72 bp GCTTCACATGTGACGTCCAAGTGTCTCAATGTGAAGTaGAGCCTGCAAACCAGCCAGTCGGACGCACAAACT +
Preference number: 6 (lower is better)
Translates to: ASHVTSKCLNVK*SLQTSQSDAQT
Trigger: AGTTTGTGCGTCCGACTGGCTGGTTTGCAGGCTCAACTTCACATTGAGACACTTGGACGTCACATGTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569597.1
ENST00000572956.5
CDS CAA 72 bp CGGACGCACAAACTGCCATCATCAATGGGAAGGGTTTaGCTGTTTCTGCCCACCTTGCTTTCCTATCCCTCA +
Preference number: 6 (lower is better)
Translates to: RTHKLPSSMGRV*LFLPTLLSYPS
Trigger: TGAGGGATAGGAAAGCAAGGTGGGCAGAAACAGCAAAACCCTTCCCATTGATGATGGCAGTTTGTGCGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569597.1
CDS TCA 72 bp AAGAGAAGCTCTCAACAGTGTGTGCTGGCCAAGCGTTaGGGTTCCAGTACAGTCTGCATTCAAGTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: KRSSQQCVLAKR*GSSTVCIQVLV
Trigger: GACAAGGACTTGAATGCAGACTGTACTGGAACCTCAACGCTTGGCCAGCACACACTGTTGAGAGCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561993.5
CDS TCA 72 bp GAAATCTTCAGGGCCCCCACTTCTTCAACTGCAAAATaGGGTCATCATGACTCAGGCTGTCCTAATGATCCC +
Preference number: 6 (lower is better)
Translates to: EIFRAPTSSTAK*GHHDSGCPNDP
Trigger: GGGATCATTAGGACAGCCTGAGTCATGATGACCTCATTTTGCAGTTGAAGAAGTGGGGGCCCTGAAGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563037.1
ENST00000563958.5
CDS TCA 72 bp GGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTTGGGATAGAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: GGVIVQVRNFLL*PTEGDLGIERA
Trigger: TGCCCTTTCTATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564107.1
CDS GCA 72 bp ACCTTGGGATCTAAGAAAGAACAAAAGCACACTTTGTaGCCATTGCCTTCTCTCCTGGCCACCAACTCTCAC +
Preference number: 6 (lower is better)
Translates to: TLGSKKEQKHTL*PLPSLLATNSH
Trigger: GTGAGAGTTGGTGGCCAGGAGAGAAGGCAATGGGCACAAAGTGTGCTTTTGTTCTTTCTTAGATCCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564133.1
CDS TCA 72 bp GGTGGTGTGATCGTACAAGTCAGAAATTTCCTCTTGTaGCCAACTGAAGGGGACCTTGGGATAATTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GGVIVQVRNFLL*PTEGDLGIIQG
Trigger: TCCCTGAATTATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565866.5
CDS TCA 72 bp GGCATTACGCTAAGAGCTTTGTATGTGCTGTCTCTCTaGATTCCTTACAACTGGAGGAGGTTGTACCCCTTG +
Preference number: 6 (lower is better)
Translates to: GITLRALYVLSL*IPYNWRRLYPL
Trigger: CAAGGGGTACAACCTCCTCCAGTTGTAAGGAATTCAGAGAGACAGCACATACAAAGCTCTTAGCGTAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568967.5
CDS TCA 72 bp GATCGTACAAGTCAGAAATTTCCTCTTGTGACCAACTaGAGGGGACCTTGGGATCTAAGAAAGAACAAAAGC +
Preference number: 6 (lower is better)
Translates to: DRTSQKFPLVTN*RGPWDLRKNKS
Trigger: GCTTTTGTTCTTTCTTAGATCCCAAGGTCCCCTTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564133.1