RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL17 (Homo sapiens)

Ensembl gene IDs: ENSG00000165792

Ensembl transcript IDs: ENST00000339374.11, ENST00000382985.8, ENST00000553441.5, ENST00000553536.5, ENST00000553564.5, ENST00000554283.1, ENST00000554588.5, ENST00000554751.5, ENST00000554949.1, ENST00000554985.5, ENST00000555177.5, ENST00000555390.6, ENST00000555533.6, ENST00000555640.6, ENST00000555670.1, ENST00000556442.1, ENST00000556670.6, ENST00000556733.1, ENST00000557279.1, ENST00000557550.6, ENST00000557701.5

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTaGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGAC +
Preference number: 1 (lower is better)
Translates to: AVPAGCEHSMLHVPI*TAQVTMHMARPFKD
Trigger: GTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CCA 90 bp AGATCTCCCCAGGAGCTGACACGGGCACAACGATACAAATCCCTGTaGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCA +
Preference number: 1 (lower is better)
Translates to: RSPQELTRAQRYKSL*KQMLAWAAASCHIP
Trigger: TGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR CCA 90 bp ACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTaGGCTGCAGCTTCCTGCCACATCCCACTGATTTTGGTCACACCC +
Preference number: 1 (lower is better)
Translates to: TRAQRYKSLWKQMLA*AAASCHIPLILVTP
Trigger: GGGTGTGACCAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR TCA 90 bp CTTTGGTTTCTTGTTCCAGCTGAAGGGGATGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGAGTTC +
Preference number: 1 (lower is better)
Translates to: LWFLVPAEGDGMVRL*EATGQVGQLGTREF
Trigger: GAACTCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAGCTGGAACAAGAAACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 90 bp GTGACAGAACCAGTACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTaGAATGCTGGATTTCGAGCCCGGATCTCATGGAATGCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: VTEPVPEPKSIKVCG*NAGFRARISWNALE
Trigger: CTCCAGAGCATTCCATGAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: ISNKHRHMGIPAFPS*IPGSFSPGRHDRRK
Trigger: TTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
3UTR TCA 90 bp GATAGGGCTGAAGAAAGTTACTCACCAGGTGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGCTGGATTTCG +
Preference number: 1 (lower is better)
Translates to: DRAEESYSPGDRTST*AKVHQSLWLKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTCACCTGGTGAGTAACTTTCTTCAGCCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR GCA 90 bp CTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAA +
Preference number: 1 (lower is better)
Translates to: LSYAIRFELPQCGQP*WAVHLRKKLTLLHQ
Trigger: TTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 90 bp AAGAAAATACTTGTTACACATCCTCATCAACTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAACGCAGACGGAGTAAGCACAGGTAAA +
Preference number: 1 (lower is better)
Translates to: KKILVTHPHQLSEGS*AVDGGNADGVSTGK
Trigger: TTTACCTGTGCTTACTCCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGATGTGTAACAAGTATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CCA 90 bp TCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACT +
Preference number: 1 (lower is better)
Translates to: SYAIRFELPQCGQPC*AVHLRKKLTLLHQT
Trigger: AGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CCA 90 bp GAATCATTAGGTAGGAACTGGATAGGAACACAAAGTAGTGGAGAGTaGCTTAGCTTTACCATCTTACATTTCCCGGCCACGCCTAAGTTC +
Preference number: 1 (lower is better)
Translates to: ESLGRNWIGTQSSGE*LSFTILHFPATPKF
Trigger: GAACTTAGGCGTGGCCGGGAAATGTAAGATGGTAAAGCTAAGCCACTCTCCACTACTTTGTGTTCCTATCCAGTTCCTACCTAATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR TCA 90 bp CTACTACATCAAACTGCACCTTGGGTGATACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATATAAGGCTCCCCAGATTCTGAACCAC +
Preference number: 1 (lower is better)
Translates to: LLHQTAPWVIQVETV*KRHLEYKAPQILNH
Trigger: GTGGTTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 90 bp AAGTTCTGGCCCCAATCCATATACCTTCTTCTGCCTTGCCTAATCTaGTGGAAGAAACATTATAGATTCCCAACTTGCCTATTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: KFWPQSIYLLLPCLI*WKKHYRFPTCLFSL
Trigger: GAGGGAGAATAGGCAAGTTGGGAATCTATAATGTTTCTTCCATCAGATTAGGCAAGGCAGAAGAAGGTATATGGATTGGGGCCAGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR-3UTR TCA 90 bp TACCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGATGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 2 (lower is better)
Translates to: YLPCRRAVSTACCMCPSGCEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555533.6
3UTR-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 2 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTARARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTALKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR TCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR CCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGACCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
3UTR-3UTR GCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGTGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 2 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR GCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 2 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp GGATGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 2 (lower is better)
Translates to: GWYACEKLQARLVNWGQGATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp CAGGAGCTGACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: QELTRAQRYKSLWKQMLAPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...CGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR CCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGTTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 2 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCAGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 2 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTAVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp TGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGAGTGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 2 (lower is better)
Translates to: WYACEKLQARLVNWGQGSECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...ACTCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCCCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 2 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp CCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: PVETDAGVGCSFLPHPTDSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...ATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR CCA 90 bp GCACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTGACAATGCACATGGCCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 2 (lower is better)
Translates to: AQHAACAHLDSTSDNAHGRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...GCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp CCGTTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGATTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 2 (lower is better)
Translates to: PFKDRLSDTGPAMSLLWRLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...TCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp TCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCAGACGGGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 2 (lower is better)
Translates to: SSSTLRGILSRRWRKRRRECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...CCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 2 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp GCACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTGACAATGCACATGGCTTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: AQHAACAHLDSTSDNAHGFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...GCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp GATGGAGGAAACGCAGACGGAGTAAGCACAGGTAAAAGATCTCCCCAGGAGCTGTGTGGAAACAGATGCTaGCGTGGGCTGCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: DGGNADGVSTGKRSPQELCGNRC*RGLQLP
Trigger: AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACA...CAGCTCCTGGGGAGATCTTTTACCTGTGCTTACTCCGTCTGCGTTTCCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR GCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SPPGYQAASALAGTIEENTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: AADLSTHIYSRRLWPQILPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp TGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGAGTACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 2 (lower is better)
Translates to: WYACEKLQARLVNWGQGSTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...ACTCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGCAAAGTAGTGGAGAGTaGCTTAGCTTTACCATCTTA +
Preference number: 2 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLQSSGE*LSFTIL
Trigger: TAAGATGGTAAAGCTAAGCCACTCTCCACTACTTTG...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR-3UTR TCA 90 bp GAACCACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCTGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 2 (lower is better)
Translates to: EPPFSSFSAKTNMAADLSCEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp AGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCTTTTGTTCCATTCAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 2 (lower is better)
Translates to: RTRSLASMRRLCPAFVPFSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR GCA 90 bp CAGGAGCTGACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 2 (lower is better)
Translates to: QELTRAQRYKSLWKQMLATTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...CGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR-3UTR TCA 90 bp GCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGGTGTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 2 (lower is better)
Translates to: AVHLRKKLTLLHQTAPWVWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...CACCCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp AAGATAGGGCTGAAGAAAGTTACTCACCAGGTGACAGAACCAGTACCTGAGCCATTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 2 (lower is better)
Translates to: KIGLKKVTHQVTEPVPEPLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...TGGCTCAGGTACTGGTTCTGTCACCTGGTGAGTAACTTTCTTCAGCCCTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR-3UTR CCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATCTGTTAATTTTGGAGTaGTGTAAGTATGGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: SPPGYQAASALAGTIEENLLILE*CKYGFL
Trigger: TAGAAAGCCATACTTACACCACTCCAAAATTAACAG...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR-3UTR CCA 90 bp GAACCACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 2 (lower is better)
Translates to: EPPFSSFSAKTNMAADLSVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CCA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACAGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 2 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR TCA 90 bp TGGGCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGCTGCCTTGCCTAATCTaGTGGAAGAAACATTATAGA +
Preference number: 2 (lower is better)
Translates to: WAVHLRKKLTLLHQTAPWLPCLI*WKKHYR
Trigger: TCTATAATGTTTCTTCCATCAGATTAGGCAAGGCAG...CCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CAA 90 bp TTCCCAACTTGCCTATTCTCCCTCTGGTTTTCCAGTCTGTTAATTTaGGAGTGGTGTAAGTATGGCTTTCTAGAGCTAAAATTGACCAAG +
Preference number: 2 (lower is better)
Translates to: FPTCLFSLWFSSLLI*EWCKYGFLELKLTK
Trigger: CTTGGTCAATTTTAGCTCTAGAAAGCCATACTTACACCACTCCAAAATTAACAGACTGGAAAACCAGAGGGAGAATAGGCAAGTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CAA 90 bp CTGTTAATTTTGGAGTGGTGTAAGTATGGCTTTCTAGAGCTAAAATaGACCAAGATAGGGCTGAAGAAAGTTACTCACCAGGTGACAGAA +
Preference number: 2 (lower is better)
Translates to: LLILEWCKYGFLELK*TKIGLKKVTHQVTE
Trigger: TTCTGTCACCTGGTGAGTAACTTTCTTCAGCCCTATCTTGGTCAATTTTAGCTCTAGAAAGCCATACTTACACCACTCCAAAATTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR-3UTR CAA 90 bp CCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 3 (lower is better)
Translates to: PCRRAVSTACCMCPSGQHSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...GTGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp CACAACGATACAAATCCCTGCCGTGCCGGCGGGCTGTaGGCACAGCATGCTGCATGTGCCCATCTGGACAGC +
Preference number: 3 (lower is better)
Translates to: HNDTNPCRAGGL*AQHAACAHLDS
Trigger: GCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTATCGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557550.6
3UTR CCA 72 bp GCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTaGACAGCACAAGTGACAATGCACATGGCGAGGCCG +
Preference number: 3 (lower is better)
Translates to: AGCEHSMLHVPI*TAQVTMHMARP
Trigger: CGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR GCA 72 bp CACGGGCACAACGATACAAATCCCTGTGGAAACAGATaGTGGCGTGGGCTGCAGCTTCCTGCCACATCCCAC +
Preference number: 3 (lower is better)
Translates to: HGHNDTNPCGNR*WRGLQLPATSH
Trigger: GTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR CCA 72 bp CAGGAGCTGACACGGGCACAACGATACAAATCCCTGTaGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: QELTRAQRYKSL*KQMLAWAAASC
Trigger: GCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
3UTR TCA 72 bp ACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTaGCAATGCACATGGCGAGGCCGTTTAAGGACAGGC +
Preference number: 3 (lower is better)
Translates to: TACCMCPSGQHK*QCTWRGRLRTG
Trigger: GCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CCA 72 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAT +
Preference number: 3 (lower is better)
Translates to: KHRHMGIPAFPS*IPGSFSPGRHD
Trigger: ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
3UTR-3UTR CAA 90 bp TGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCTGAGTAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 3 (lower is better)
Translates to: WTAQVTMHMARPFKDRLSSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...ACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR-3UTR CAA 90 bp TACCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGATTTCTAGAGCTAAAATaGACCAAGATAGGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: YLPCRRAVSTACCMCPSGFLELK*TKIGLK
Trigger: CTTCAGCCCTATCTTGGTCAATTTTAGCTCTAGAAA...TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CCA 72 bp TCCTTTGGTTTCTTGTTCCAGCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTC +
Preference number: 3 (lower is better)
Translates to: SFGFLFQLKGMG*YACEKLQARLV
Trigger: GACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAGCTGGAACAAGAAACCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR GCA 72 bp TTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTCTCCACCAGTACCAGG +
Preference number: 3 (lower is better)
Translates to: LRTRSLASMRRL*PAFVPFSTSTR
Trigger: CCTGGTACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
3UTR-3UTR CAA 90 bp CGCCTAAGTTCAGATCCGTGTGGTGGGACAGGCAGAAGTAATACTCACCGGGGCATACCTTCTTCTGCCTaGCCTAATCTGATGGAAGAA +
Preference number: 3 (lower is better)
Translates to: RLSSDPCGGTGRSNTHRGIPSSA*PNLMEE
Trigger: TTCTTCCATCAGATTAGGCAAGGCAGAAGAAGGTAT...GCCCCGGTGAGTATTACTTCTGCCTGTCCCACCACACGGATCTGAACTTAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR TCA 72 bp CTTGTTACACATCCTCATCAACTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAACGCAGACGGAGTAAGC +
Preference number: 3 (lower is better)
Translates to: LVTHPHQLSEGS*AVDGGNADGVS
Trigger: GCTTACTCCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGATGTGTAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR GCA 72 bp ATTTCGAGCCCGGATCTCATGGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAGTCTTGCTGCCATATA +
Preference number: 3 (lower is better)
Translates to: ISSPDLMECSGD*CKATIQSCCHI
Trigger: TATATGGCAGCAAGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR GCA 72 bp TTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTCTCCACCAGTACCTGT +
Preference number: 3 (lower is better)
Translates to: LRTRSLASMRRL*PAFVPFSTSTC
Trigger: ACAGGTACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR GCA 72 bp GACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCAGTTCACTTAAGGAAA +
Preference number: 3 (lower is better)
Translates to: DLSYAIRFELPQ*GQPCWAVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp CCAGTACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTaGAATGCTGGATTTCGAGCCCGGATCTCATGGAAT +
Preference number: 3 (lower is better)
Translates to: PVPEPKSIKVCG*NAGFRARISWN
Trigger: ATTCCATGAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp AATACTGTGAGCAGCCCAGGTGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGC +
Preference number: 3 (lower is better)
Translates to: NTVSSPGDRTST*AKVHQSLWLKC
Trigger: GCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
3UTR GCA 72 bp GCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGGAAAAAGCTGACACTA +
Preference number: 3 (lower is better)
Translates to: AIRFELPQCGQP*WAVHLRKKLTL
Trigger: TAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp GAAGAAAGTTACTCACCAGGTGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGC +
Preference number: 3 (lower is better)
Translates to: EESYSPGDRTST*AKVHQSLWLKC
Trigger: GCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTCACCTGGTGAGTAACTTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CCA 72 bp ATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAAAAGCTGACACTACTA +
Preference number: 3 (lower is better)
Translates to: IRFELPQCGQPC*AVHLRKKLTLL
Trigger: TAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAACCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp CAAACTGCACCTTGGGTGATACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATATAAGGCTCCCCAGATT +
Preference number: 3 (lower is better)
Translates to: QTAPWVIQVETV*KRHLEYKAPQI
Trigger: AATCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTGTATCACCCAAGGTGCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR TCA 72 bp CCCCAATCCATATACCTTCTTCTGCCTTGCCTAATCTaGTGGAAGAAACATTATAGATTCCCAACTTGCCTA +
Preference number: 3 (lower is better)
Translates to: PQSIYLLLPCLI*WKKHYRFPTCL
Trigger: TAGGCAAGTTGGGAATCTATAATGTTTCTTCCATCAGATTAGGCAAGGCAGAAGAAGGTATATGGATTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CCA 72 bp AAACATTATAGATTCCCAACTTGCCTATTCTCCCTCTaGTTTTCCAGTCTGTTAATTTTGGAGTGGTGTAAG +
Preference number: 3 (lower is better)
Translates to: KHYRFPTCLFSL*FSSLLILEWCK
Trigger: CTTACACCACTCCAAAATTAACAGACTGGAAAACCAGAGGGAGAATAGGCAAGTTGGGAATCTATAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp CCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PCRRAVSTACCMCPSGQHVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...GTGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGACCCCAGGAGCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRPQELP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGCTCCTGGGG...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556670.6
ENST00000556733.1
CDS-3UTR TCA 90 bp TACAAATCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCAATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: YKSLPCRRAVSTACCMCPIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...TGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR TCA 90 bp CCCCCATACCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCAGATCTCCCCAGGAGCTaGCACGGGCACAACGATACA +
Preference number: 4 (lower is better)
Translates to: PPYLPCRRAVSTACCMCPDLPRS*HGHNDT
Trigger: TGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATC...TGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR TCA 90 bp CCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACCGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PCRRAVSTACCMCPSGQHRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...GTGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCCCCATACCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCACTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PPYLPCRRAVSTACCMCPLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...TGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATATCAGTGCCGCCGCCATaGCTCCGGAGGCGAACCGGA +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTISVPPP*LRRRTG
Trigger: TCCGGTTCGCCTCCGGAGCCATGGCGGCGGCACTGA...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339374.11
ENST00000382985.8
CDS-3UTR CCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACCCCCAGGAGCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYPQELP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGCTCCTGGGG...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556670.6
ENST00000556733.1
CDS-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCATGTGGAAACAGATGCTaGCGTGGGCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTACGNRC*RGLQLP
Trigger: AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACA...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp TCTCCCCAGGAGCTGACACGGGCACAACGATACAAATCCCTGCCGTGCCGGCGGCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: SPQELTRAQRYKSLPCRRQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...CCGCCGGCACGGCAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR CCA 90 bp CATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HSPPGYQAASALAGTIEEVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...TTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTAPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARCEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGACGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGGATCTCCCCAGGAGCTaGCACGGGCACAACGATACA +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRDLPRS*HGHNDT
Trigger: TGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATC...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGCTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGATGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LPCRRAVSTACCMCPSGQPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: GIPAFPSWIPGSFSPGRHQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...GTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCCCATACCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQPPYLP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATACCCAGGAGTGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTIPRSGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCACTCCTGGG...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASAVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LFSLKDQIPGIHEKAVPSVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...GCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCATTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTALWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: SLPCRRAVSTACCMCPSGLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR CCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGGTCAGTGTTTGCACCTaGTTCTCCATAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTVSVCT*FSIVGP
Trigger: TGGGCCCACTATGGAGAATCAGGTGCAAACACTGAC...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PVETDAGVGCSFLPHPTDDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...ATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR TCA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: GIPAFPSWIPGSFSPGRHVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...GTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCCGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp TCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGAGAGATAAGTCTGTGGTaGGAACAAGGACTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SLPCRRAVSTACCMCPSGEISLW*EQGLEV
Trigger: GACTTCCAGTCCTTGTTCTCACCACAGACTTATCTC...TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR GCA 90 bp CATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAGCGGCAGCTTTAGGATaGCAGGGTGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: HSPPGYQAASALAGTIEEAAALG*QGAGDE
Trigger: CTCATCGCCAGCACCCTGGCATCCTAAAGCTGCCGC...TTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: GIPAFPSWIPGSFSPGRHATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...GTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGTGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLWKQMLAWAAASCHIPLAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...CAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp CTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCGATGCTGGCGTGGGCTaGAGCTTCCTGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: LFSLKDQIPGIHEKAVPSDAGVG*SFLPHP
Trigger: GGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATC...GCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGGTCAGTGTTTGCACCTaGTTCTCCATAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRVSVCT*FSIVGP
Trigger: TGGGCCCACTATGGAGAATCAGGTGCAAACACTGAC...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAACGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: HSPPGYQAASALAGTIEERLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...TTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGATCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCGATCTCCCCAGGAGCTaGCACGGGCACAACGATACA +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPDLPRS*HGHNDT
Trigger: TGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATC...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCAAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTASFSSV*DKSVVR
Trigger: TCTCACCACAGACTTATCTCAGACAGAGGAGAAACT...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCAAAGTTACTCACCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQAKLLTR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGTGAGTAACTT...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR GCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACGCGGCAGCTTTAGGATaGCAGGGTGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYAAALG*QGAGDE
Trigger: CTCATCGCCAGCACCCTGGCATCCTAAAGCTGCCGC...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATTGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGATGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQAPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGACAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGACCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GIPAFPSWIPGSFSPGRHSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...GTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TACAAATCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCACTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: YKSLPCRRAVSTACCMCPLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...TGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR CCA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCATGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQACGQPC*AVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCA...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTIGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LFSLKDQIPGIHEKAVPSAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...GCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASAAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQALHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTDRTST*AKVHQS
Trigger: ACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTC...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCTGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASACEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: PGNDLSYAIRFELPQCGQIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...CTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCTGAGTTGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: WTAQVTMHMARPFKDRLSCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...ACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATTTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PVETDAGVGCSFLPHPTDFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...ATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGTCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTSMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp AAAGGTGACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCCCCCATACCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KGDFSFPLRTRSLASMRRPPYLP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG...CCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp CCGTTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGATGGGCTGCAGCTTCCTaGCACATCCCACTGATTTTG +
Preference number: 4 (lower is better)
Translates to: PFKDRLSDTGPAMSLLWRWAAAS*HIPLIL
Trigger: CAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCA...TCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGATTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGCACATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: AVPAGCEHSMLHVPIWTAHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...TGCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CCCATCTGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PIWTAQVTMHMARPFKDRPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...CCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASAPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGGAGGACAGGAGCAGTaGGTAGGAAGAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: HNDTNPCGNRCWRGLQLPGGQEQ*VGRARG
Trigger: TCCCCTGGCTCTTCCTACCCACTGCTCCTGTCCTCC...AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
3UTR CAA 72 bp ATGGGATGGTACGCCTGTGAGAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGGAGTTCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: MGWYACEKLQAR*VNWGQGSSWGH
Trigger: GTGTCCCCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGTCGAGGGTCCAAAGGTaGCTTCTCTTTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRSRVQR*LLFSLK
Trigger: CTTAAGGGAAAAGAGAAGTCACCTTTGGACCCTCGA...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATACGGGGCCAGCGATaGGCCTCCTCTGGAGACCCC +
Preference number: 4 (lower is better)
Translates to: IPGSFSPGRHDRRKYLLHIRGQR*ASSGDP
Trigger: GGGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTAT...GTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LFSLKDQIPGIHEKAVPSSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...GCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATCTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp GACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCGCGGCAGCTTTAGGATaGCAGGGTGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: DFSFPLRTRSLASMRRLCAAALG*QGAGDE
Trigger: CTCATCGCCAGCACCCTGGCATCCTAAAGCTGCCGC...GCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: IWGYQHSPPGYQAASALAATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATTTTGGTCACGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TDAGVGCSFLPHPTDFGHATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...GTGACCAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GATGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGAGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: DGTPVRSYRPGWSTGDKGECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...TCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATACCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTIPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATCAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCATTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IWGYQHSPPGYQAASALAFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCAGACGGGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SSSTLRGILSRRWRKRRRVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...CCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCAGACGGGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSTLRGILSRRWRKRRRAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...CCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGGCTGCAGCTTCCTaGCACATCCCACTGATTTTG +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPWAAAS*HIPLIL
Trigger: CAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCA...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp CAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGATGCTGGCGTGGGCTaGAGCTTCCTGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: QTNTDIWGYQHSPPGYQADAGVG*SFLPHP
Trigger: GGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATC...TGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp AATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCTCAGTGCCGCCGCCATaGCTCCGGAGGCGAACCGGA +
Preference number: 4 (lower is better)
Translates to: NLKQTQTYGDTSIPLLDTSVPPP*LRRRTG
Trigger: TCCGGTTCGCCTCCGGAGCCATGGCGGCGGCACTGA...GGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339374.11
ENST00000382985.8
CDS-3UTR CCA 90 bp TCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGTTAGCCAGTGCCTGTaGCAGCCGCACGTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SQTNTDIWGYQHSPPGYQVSQCL*QPHVRQ
Trigger: CTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAAC...CTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: GIPAFPSWIPGSFSPGRHSLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...GTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGACTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCCTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCGATGAGCCTCCTCTaGAGACCCCCGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASAMSLL*RPPSKD
Trigger: ATCCTTGCTCGGGGGTCTCCAGAGGAGGCTCATCGC...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATCTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCCGATACAAATCCCTGTaGAAACAGATGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGRYKSL*KQMLAW
Trigger: CCACGCCAGCATCTGTTTCCACAGGGATTTGTATCG...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCATGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASCEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp AACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: NKHRHMGIPAFPSWIPGSGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...GCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp TACACATCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: YTSSSTLRGILSRRWRKRGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...GCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGATGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGATCTCCCCAGGAGCTaGCACGGGCACAACGATACA +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASDLPRS*HGHNDT
Trigger: TGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATC...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCGGCAGCTTTAGGATaGCAGGGTGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: QTNTDIWGYQHSPPGYQAAAALG*QGAGDE
Trigger: CTCATCGCCAGCACCCTGGCATCCTAAAGCTGCCGC...TGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGGCGGCAGCTTTAGGATaGCAGGGTGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRAAALG*QGAGDE
Trigger: CTCATCGCCAGCACCCTGGCATCCTAAAGCTGCCGC...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGACTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARLQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCCACCATCCAGTCTTaGTGCCATATACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPATIQS*CHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGC...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCTGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATTGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTISLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GGATGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GWYACEKLQARLVNWGQGSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGGTGCCCCCATACCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: AVHLRKKLTLLHQTAPWVPPYLP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG...CACCCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAGATGCTGGCGTGGGCTaGAGCTTCCTGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLDAGVG*SFLPHP
Trigger: GGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATC...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCACCCTGTGGAAACAGATaGTGGCGTGGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASPCGNR*WRGLQL
Trigger: AAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGG...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCGACTTGTTATCTACCTaGGTCACTCCGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGDLLST*VTPGTK
Trigger: CTTAGTACCCGGAGTGACCCAGGTAGATAACAAGTC...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACCCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: DTSIPLLDTRQLQPWQARSLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...TCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACGATACAAATCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: TIQIPAVPAGCEHSMLHVSLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...CACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR CCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: GYQHSPPGYQAASALAGTVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPCGQPC*AVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCA...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TCTCCCCAGGAGCTGACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SPQELTRAQRYKSLWKQMARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...CATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCCTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp GCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASSGDPRARITIENFSSFPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...AAAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GGACACGGGGCAAAGACAAAACCAGGTCGAGGGTCCAAAGGTGACTTCTCTTTTCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GHGAKTKPGRGSKGDFSFPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...AAAAGAGAAGTCACCTTTGGACCCTCGACCTGGTTTTGTCTTTGCCCCGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGTGTGAGCAGCCCAGGTaGCAGAACCAGTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQCEQPR*QNQYLS
Trigger: GCTCAGGTACTGGTTCTGTCACCTGGGCTGCTCACA...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: DFSFPLRTRSLASMRRLCWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...GCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDNQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTINQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQAQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TACAAATCCCTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: YKSLPCRRAVSTACCMCPQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...TGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557550.6
CDS-3UTR TCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAASGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ASSGDPRARITIENFSSFSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...AAAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGGATCTCCCCAGGAGCTaGCACGGGCACAACGATACA +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQDLPRS*HGHNDT
Trigger: TGTATCGTTGTGCCCGTGTCAGCTCCTGGGGAGATC...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GGACACGGGGCAAAGACAAAACCAGGTCGAGGGTCCAAAGGTGACTTCTCTTTTCTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GHGAKTKPGRGSKGDFSFLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...AAAAGAGAAGTCACCTTTGGACCCTCGACCTGGTTTTGTCTTTGCCCCGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTCTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAALSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGGGCAGGAGAATCACTTaGACCCAGGAGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AADLSTHIYSRRLWPQILGRRIT*TQEWRL
Trigger: CAGCCTCCACTCCTGGGTTCAAGTGATTCTCCTGCC...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR GCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCATCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: IWGYQHSPPGYQAASALASMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp AACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: NKHRHMGIPAFPSWIPGSVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...GCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTATACAAATCCCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLYKSLP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTA...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339374.11
ENST00000557550.6
CDS-3UTR GCA 90 bp GGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTCCCTGTGGAAACAGATaGTGGCGTGGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GNDLSYAIRFELPQCGQPPCGNR*WRGLQL
Trigger: AAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGG...AGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp CCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCCTGTGGAAACAGATaGTGGCGTGGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGNDLSYAIRFELPQCGQPCGNR*WRGLQL
Trigger: AAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGG...CTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPSLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASASHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: NKHRHMGIPAFPSWIPGSRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...GCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTGACAATGCACATGGCTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AQHAACAHLDSTSDNAHGCGQPC*AVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCA...GCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CCCATCTGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PIWTAQVTMHMARPFKDRCGQPC*AVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCA...CCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAAGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCCAGCATTCCCCTCCTaGATACCAGGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRPAFPS*IPGSFS
Trigger: GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp GCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTTGTGGAAACAGATGCTaGCGTGGGCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASSGDPRARITIENFSSFCGNRC*RGLQLP
Trigger: AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACA...AAAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGGACAAGGGAGTTCATaGGGACACTGTGAACACATA +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALGQGSS*GHCEHI
Trigger: TATGTGTTCACAGTGTCCCCATGAACTCCCTTGTCC...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR TCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTGTCAGTGTTTGCACCTaGTTCTCCATAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAAVSVCT*FSIVGP
Trigger: TGGGCCCACTATGGAGAATCAGGTGCAAACACTGAC...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TACACATCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCGTCAGTGTTTGCACCTaGTTCTCCATAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: YTSSSTLRGILSRRWRKRVSVCT*FSIVGP
Trigger: TGGGCCCACTATGGAGAATCAGGTGCAAACACTGAC...GCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGATGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCAGTTTCTCCTCTGTCTaGGATAAGTCTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPSFSSV*DKSGFS
Trigger: GGAAAACCCAGACTTATCTCAGACAGAGGAGAAACT...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000556670.6
CDS-3UTR TCA 90 bp ATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: MGIPAFPSWIPGSFSPGRQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...CCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: ASSGDPRARITIENFSSFVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...AAAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CAGGAGCTGACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGGAGATAAGTCTGTGGTaGGAACAAGGACTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QELTRAQRYKSLWKQMLAEISLW*EQGLEV
Trigger: GACTTCCAGTCCTTGTTCTCACCACAGACTTATCTC...CGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAAECSGD*CKATIQ
Trigger: CTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTC...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCTCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSSMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGGCTGTGAGCACAGCATaGTGCATGTGCCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQAVSTA*CMCPSG
Trigger: TCCAGATGGGCACATGCAGCATGCTGTGCTCACAGC...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATACAAATCCCTGCCGTaGCGGCGGGCTGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPYKSLP*RRAVST
Trigger: TGTGCTCACAGCCCGCCGGCACGGCAGGGATTTGTA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339374.11
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTCCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAAPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGCGAGCCCGGATCTCATaGAATGCTCTGGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: AADLSTHIYSRRLWPQILRARIS*NALETA
Trigger: AGCAGTCTCCAGAGCATTCCATGAGATCCGGGCTCG...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGACCCGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: FKDRLSDTGPAMSLLWRPVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...GGGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCTGAGTCGATACAAATCCCTGTaGAAACAGATGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WTAQVTMHMARPFKDRLSRYKSL*KQMLAW
Trigger: CCACGCCAGCATCTGTTTCCACAGGGATTTGTATCG...ACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR TCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACAGTTTCTCCTCTGTCTaGGATAAGTCTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYSFSSV*DKSGFS
Trigger: GGAAAACCCAGACTTATCTCAGACAGAGGAGAAACT...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000556670.6
CDS-3UTR TCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQDRTST*AKVHQS
Trigger: ACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTC...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SQTNTDIWGYQHSPPGYQWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...CTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCGTTTCTTGTTCCAGCTaGAGGGGATGGGATGGTACG +
Preference number: 4 (lower is better)
Translates to: SNKHRHMGIPAFPSWIPGVSCSS*RGWDGT
Trigger: CGTACCATCCCATCCCCTTCAGCTGGAACAAGAAAC...GCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp GAACCACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCCGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: EPPFSSFSAKTNMAADLSRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCCGTTTAAGGACAGGCTaGGTGATACGGGGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: NLKQTQTYGDTSIPLLDTRLRTG*VIRGQR
Trigger: TCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACG...GGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp ATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACTCTGGACAGCACAAGTaGCAATGCACATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: IPGSFSPGRHDRRKYLLHSGQHK*QCTWRG
Trigger: GCCTCGCCATGTGCATTGTCACTTGTGCTGTCCAGA...GTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACTGTGGCAGCCGCACGTaGGGCAGCTTTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYCGSRT*GSFRMP
Trigger: TGGCATCCTAAAGCTGCCGCACGTGCGGCTGCCACA...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASALQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACCTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYLQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGTGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCCCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPTTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGTTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AADLSTHIYSRRLWPQILFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGTCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQSMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: IPGSFSPGRHDRRKYLLHVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...GTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACAGTGAGCACAGCATGCTaGATGTGCCCATCTGGACAG +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTVSTAC*MCPSGQ
Trigger: CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCAC...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: TDIWGYQHSPPGYQAASASLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AGCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTCTCATGGAATGCTCTaGAGACTGCTGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLWRPPSKDHHRELFFLSHGML*RLLQSH
Trigger: GTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGA...AAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCTTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: RAQRYKSLWKQMLAWAAAVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...AGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp GACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: DFSFPLRTRSLASMRRLCLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...GCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGTCTGAAAAAGACACCTaGAATATAAGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: DIWGYQHSPPGYQAASALSEKDT*NIRLPR
Trigger: TCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGA...CAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAGGACAAGGGAGTTCATaGGGACACGGGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLGQGSS*GHGAKT
Trigger: TGTCTTTGCCCCGTGTCCCCATGAACTCCCTTGTCC...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACAGCCAGGTTGGTCAACTaGGGACAAGGGAGTTCATGG +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTARLVN*GQGSSW
Trigger: CCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGC...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp GGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: GNDLSYAIRFELPQCGQPLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...AGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: AADLSTHIYSRRLWPQILLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: QAASALAGTIEENTCYTSLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCCTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTATGTGGAAACAGATGCTaGCGTGGGCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLCGNRC*RGLQLP
Trigger: AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACA...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR TCA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCCAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCACCAGTACCAGGAAATaGCCTGTCTTACGCCATAAG +
Preference number: 4 (lower is better)
Translates to: NKHRHMGIPAFPSWIPGSTSTRK*PVLRHK
Trigger: CTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGT...GCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAACCAGTACCAGGAAATaGCCTGTCTTACGCCATAAG +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASTSTRK*PVLRHK
Trigger: CTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGT...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACGATCCCTGGCATCCATaGGAAGGCTGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYDPWHP*EGCAQL
Trigger: AAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATC...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACGGGATGGTACGCCTGTaGGAAGCTACAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYGMVRL*EATGQV
Trigger: AACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCACTCTCAGAGGGATCCTaGGCCGTAGATGGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPLSEGS*AVDGGN
Trigger: GTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAG...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR GCA 90 bp CACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTCTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: HNDTNPCGNRCWRGLQLPLQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...AGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR GCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LKQTQTYGDTSIPLLDTRTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...CCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QAASALAGTIEENTCYTSTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCCGGATCTCATGGAATaGTCTGGAGACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQPDLME*SGDCCK
Trigger: TTTGCAGCAGTCTCCAGAGCATTCCATGAGATCCGG...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GCCTCCTCTGGAGACCCCCGAGCAAGGATCACCATAGAGAACTTTTCTTCCTTTAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: ASSGDPRARITIENFSSFSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...AAAGGAAGAAAAGTTCTCTATGGTGATCCTTGCTCGGGGGTCTCCAGAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCACAGTGCGGTCAGCCTTaGTGGGCAGTTCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPQCGQP*WAVHLR
Trigger: CCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTG...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGTTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQTNTDIWGYQHSPPGYQFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...CTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTATTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGCTGGATTTCGAGCCCTGGGCTGCAGCTTCCTaGCACATCCCACTGATTTTG +
Preference number: 4 (lower is better)
Translates to: YLSQSPSKFVAEMLDFEPWAAAS*HIPLIL
Trigger: CAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCA...GGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp CCACCAGTACCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGCCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PPVPGNDLSYAIRFELPQPSSNN*APLASA
Trigger: GGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGG...CTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCTTTTGTTCCATTCTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: RTRSLASMRRLCPAFVPFSLQLL*LYRQMS
Trigger: AGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGA...GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCTTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: SNKHRHMGIPAFPSWIPGLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...GCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTGACAATGCACATGGCGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: AQHAACAHLDSTSDNAHGVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...GCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCCTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: QAASALAGTIEENTCYTSLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATTCTGAAAAAGACACCTaGAATATAAGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPPGYQAASALAGTIEENSEKDT*NIRLPR
Trigger: TCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGA...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCACAGCATGCTGCATGTGCCCATCTGGACAGCACAAGTGACAATGCACATGGCTCTGAAAAAGACACCTaGAATATAAGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQHAACAHLDSTSDNAHGSEKDT*NIRLPR
Trigger: TCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGA...GCCATGTGCATTGTCACTTGTGCTGTCCAGATGGGCACATGCAGCATGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCTGCGGTCAGCCTTGCTaGGCAGTTCACTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QAASALAGTIEENTCYTSCGQPC*AVHLRK
Trigger: TTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCA...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCCTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: QAASALAGTIEENTCYTSLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCTGAGTACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: WTAQVTMHMARPFKDRLSTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...ACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR TCA 90 bp CCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PGSFSPGRHDRRKYLLHIDRTST*AKVHQS
Trigger: ACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTC...GATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACTGGCCCCAAATACTGTaGGCAGCCCAGGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYWPQIL*AAQVTE
Trigger: TTCTGTCACCTGGGCTGCTCACAGTATTTGGGGCCA...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASNQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGACCAGTACCAGGAAATaGCCTGTCTTACGCCATAAG +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQTSTRK*PVLRHK
Trigger: CTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGT...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCTCGAGGGTCCAAAGGTaGCTTCTCTTTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PGSFSPGRHDRRKYLLHISRVQR*LLFSLK
Trigger: CTTAAGGGAAAAGAGAAGTCACCTTTGGACCCTCGA...GATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGTCGAGGGTCCAAAGGTaGCTTCTCTTTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQSRVQR*LLFSLK
Trigger: CTTAAGGGAAAAGAGAAGTCACCTTTGGACCCTCGA...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GGACACGGGGCAAAGACAAAACCAGGTCGAGGGTCCAAAGGTGACTTCTCTTTTAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GHGAKTKPGRGSKGDFSFSFSSV*DKSVVR
Trigger: TCTCACCACAGACTTATCTCAGACAGAGGAGAAACT...AAAAGAGAAGTCACCTTTGGACCCTCGACCTGGTTTTGTCTTTGCCCCGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLLQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp GAACCACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCTGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: EPPFSSFSAKTNMAADLSCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATGCTCTGGAGACTGCTaGAAAGCCACCATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPCSGDC*KATIQS
Trigger: AGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATTTGAACTACCTCAGTaGGGTCAGCCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPFELPQ*GQPCWA
Trigger: TGCCCAGCAAGGCTGACCGCACTGAGGTAGTTCAAA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCCTGAAGGGGATGGGATaGTACGCCTGTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: NLKQTQTYGDTSIPLLDTLKGMG*YACEKL
Trigger: TAGCTTCTCACAGGCGTACCATCCCATCCCCTTCAG...GGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACGATACAAATCCCTGTaGAAACAGATGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLRYKSL*KQMLAW
Trigger: CCACGCCAGCATCTGTTTCCACAGGGATTTGTATCG...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CCA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATACTGTTAATTTTGGAGTaGTGTAAGTATGGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: YQHSPPGYQAASALAGTILLILE*CKYGFL
Trigger: TAGAAAGCCATACTTACACCACTCCAAAATTAACAG...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp TCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCAGACGGCAAAGTAGTGGAGAGTaGCTTAGCTTTACCATCTTA +
Preference number: 4 (lower is better)
Translates to: SSSTLRGILSRRWRKRRRQSSGE*LSFTIL
Trigger: TAAGATGGTAAAGCTAAGCCACTCTCCACTACTTTG...CCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp CGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCATTAGGTAGGAACTaGATAGGAACACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RAQRYKSLWKQMLAWAAASLGRN*IGTQSS
Trigger: ACTACTTTGTGTTCCTATCCAGTTCCTACCTAATGA...AGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR TCA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACAGTCAGTGTTTGCACCTaGTTCTCCATAGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTVSVCT*FSIVGP
Trigger: TGGGCCCACTATGGAGAATCAGGTGCAAACACTGAC...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: SQTNTDIWGYQHSPPGYQDRTST*AKVHQS
Trigger: ACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTC...CTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: PGSFSPGRHDRRKYLLHINQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...GATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CCACCAGTACCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGACCAGTACCAGGAAATaGCCTGTCTTACGCCATAAG +
Preference number: 4 (lower is better)
Translates to: PPVPGNDLSYAIRFELPQTSTRK*PVLRHK
Trigger: CTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGT...CTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR GCA 90 bp CAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCACTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QTNTDIWGYQHSPPGYQALQANV*SRDNWS
Trigger: TGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAG...TGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGGCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGTGCCTAGCCCGTCTTTaGAACTCCTCTGGCTCTACA +
Preference number: 4 (lower is better)
Translates to: WAVHLRKKLTLLHQTAPWCLARL*NSSGST
Trigger: TGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCA...CCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASTTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 4 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFTTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAATTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTSMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACAGACTTGTTATCTACCTaGGTCACTCCGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTDLLST*VTPGTK
Trigger: CTTAGTACCCGGAGTGACCCAGGTAGATAACAAGTC...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATTGTGGCTGAAATGCTaGATTTCGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPLWLKC*ISSPDL
Trigger: GAGATCCGGGCTCGAAATCCAGCATTTCAGCCACAA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTCTGAAAAAGACACCTaGAATATAAGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWIPGSFSPGRHDRRKYLSEKDT*NIRLPR
Trigger: TCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGA...CAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTCATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAAHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCCATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: NKHRHMGIPAFPSWIPGSHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...GCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGCCTACAAACACAGACATATaGGGATACCAGCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: GNDLSYAIRFELPQCGQPTNTDI*GYQHSP
Trigger: AGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT...AGGCTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TGGACAGCACAAGTGACAATGCACATGGCGAGGCCGTTTAAGGACAGGCTGAGTTGCCTATTCTCCCTCTaGTTTTCCAGTCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: WTAQVTMHMARPFKDRLSCLFSL*FSSLLI
Trigger: AATTAACAGACTGGAAAACCAGAGGGAGAATAGGCA...ACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCACTTGTGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp CGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTATTTCTTTTAAGTTCTaGCCCCAATCCATATACCTT +
Preference number: 4 (lower is better)
Translates to: RAQRYKSLWKQMLAWAAAISFKF*PQSIYL
Trigger: AAGGTATATGGATTGGGGCCAGAACTTAAAAGAAAT...AGCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR TCA 90 bp TGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTAAGTTTCTCCTCTGTCTaGGATAAGTCTGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: WIPGSFSPGRHDRRKYLLSFSSV*DKSGFS
Trigger: GGAAAACCCAGACTTATCTCAGACAGAGGAGAAACT...TAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000556670.6
CDS-3UTR TCA 90 bp TACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGCTGGATTTCGAGCCCAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: YLSQSPSKFVAEMLDFEPNQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...GGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: NTDIWGYQHSPPGYQAASQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...TGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAACCAGTACCAGGAAATaGCCTGTCTTACGCCATAAG +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPTSTRK*PVLRHK
Trigger: CTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGT...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACTCGAGGGTCCAAAGGTaGCTTCTCTTTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HLSVVFLPKPTWQLICPHSRVQR*LLFSLK
Trigger: CTTAAGGGAAAAGAGAAGTCACCTTTGGACCCTCGA...GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TGGGCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGACCATCCAGTCTTGCTaGCATATACACCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WAVHLRKKLTLLHQTAPWTIQSC*HIHQAQ
Trigger: CTGAGCCTGGTGTATATGGCAGCAAGACTGGATGGT...CCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAAGTTTGTGGCTGAAATaGTGGATTTCGAGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPSLWLK*WISSPD
Trigger: ATCCGGGCTCGAAATCCAGCATTTCAGCCACAAACT...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR GCA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATCCATGAGAAGGCTGTaGCCAGCTTTTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPSMRRL*PAFVPF
Trigger: GAATGGAACAAAAGCTGGGCACAGCCTTCTCATGGA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCTGCCAAAACCAACATaGCAGCTGATCTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYLPKPT*QLICPH
Trigger: GTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAG...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: KQTQTYGDTSIPLLDTRQHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...CTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp GCAGTTCACTTAAGGAAAAAGCTGACACTACTACATCAAACTGCACCTTGGGTGCTGCATGTGCCCATCTaGACAGCACAAGTGACAATG +
Preference number: 4 (lower is better)
Translates to: AVHLRKKLTLLHQTAPWVLHVPI*TAQVTM
Trigger: CATTGTCACTTGTGCTGTCCAGATGGGCACATGCAG...CACCCAAGGTGCAGTTTGATGTAGTAGTGTCAGCTTTTTCCTTAAGTGAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACGACAGAACCAGTACCTaGGCCAAAGTCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYDRTST*AKVHQS
Trigger: ACTTTGATGGACTTTGGCTCAGGTACTGGTTCTGTC...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACTCGAGGGTCCAAAGGTaGCTTCTCTTTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYSRVQR*LLFSLK
Trigger: CTTAAGGGAAAAGAGAAGTCACCTTTGGACCCTCGA...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp GAACCACCTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: EPPFSSFSAKTNMAADLSSFSSV*DKSVVR
Trigger: TCTCACCACAGACTTATCTCAGACAGAGGAGAAACT...GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAGGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR GCA 90 bp TACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGCTGGATTTCGAGCCCACTACTACATCAAACTaGACCTTGGGTGATACAGGT +
Preference number: 4 (lower is better)
Translates to: YLSQSPSKFVAEMLDFEPTTTSN*TLGDTG
Trigger: ACCTGTATCACCCAAGGTGCAGTTTGATGTAGTAGT...GGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACAGACTTGTTATCTACCTaGGTCACTCCGGGTACTAAG +
Preference number: 4 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTDLLST*VTPGTK
Trigger: CTTAGTACCCGGAGTGACCCAGGTAGATAACAAGTC...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACAGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: YQAASALAGTIEENTCYTVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp TCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGTCCATCAAAGTTTGTaGCTGAAATGCTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: SQTNTDIWGYQHSPPGYQVHQSL*LKCWIS
Trigger: CGAAATCCAGCATTTCAGCCACAAACTTTGATGGAC...CTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CCA 90 bp AAAGGTGACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCATCAAACTGCACCTTaGGTGATACAGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: KGDFSFPLRTRSLASMRRHQTAP*VIQVET
Trigger: AGTTTCTACCTGTATCACCCAAGGTGCAGTTTGATG...CCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTCACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACAACCAACATGGCAGCTaGTCTGTCCACACACATATA +
Preference number: 4 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYNQHGS*SVHTHI
Trigger: TATATGTGTGTGGACAGATCAGCTGCCATGTTGGTT...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR TCA 90 bp TACCTGAGCCAAAGTCCATCAAAGTTTGTGGCTGAAATGCTGGATTTCGAGCCCCTGCCTTGCCTAATCTaGTGGAAGAAACATTATAGA +
Preference number: 4 (lower is better)
Translates to: YLSQSPSKFVAEMLDFEPLPCLI*WKKHYR
Trigger: TCTATAATGTTTCTTCCATCAGATTAGGCAAGGCAG...GGGCTCGAAATCCAGCATTTCAGCCACAAACTTTGATGGACTTTGGCTCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CCA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACATCTGAAAAAGACACCTaGAATATAAGGCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTSEKDT*NIRLPR
Trigger: TCTGGGGAGCCTTATATTCCAGGTGTCTTTTTCAGA...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR TCA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACACAGGTAGAAACTGTCTaGAAAAGACACCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTQVETV*KRHLEY
Trigger: ATATTCCAGGTGTCTTTTTCAGACAGTTTCTACCTG...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
3UTR CAA 72 bp TGCCTATTCTCCCTCTGGTTTTCCAGTCTGTTAATTTaGGAGTGGTGTAAGTATGGCTTTCTAGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: CLFSLWFSSLLI*EWCKYGFLELK
Trigger: TTTTAGCTCTAGAAAGCCATACTTACACCACTCCAAAATTAACAGACTGGAAAACCAGAGGGAGAATAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS GCA 90 bp TGCTGGCAATCGCTAGGGCGGGGGCTGCCAGGAGCGCTCCTCCTCTaGGCGGAGATGTCTCTGCAGATCCAGAGTCTCTCCGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: CWQSLGRGLPGALLL*AEMSLQIQSLSDSR
Trigger: CCTGCTGTCGGAGAGACTCTGGATCTGCAGAGACATCTCCGCGCAGAGGAGGAGCGCTCCTGGCAGCCCCCGCCCTAGCGATTGCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS-3UTR CAA 90 bp CTGCCGTGCCGGCGGGCTGTGAGCACAGCATGCTGCATGTGCCCATCTGGACAGATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: LPCRRAVSTACCMCPSGQMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...CTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS CCA 90 bp CGTTTCTTCTCGCTTTCCCGCCGTTACTCACCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCCTGTGGCAGCCGCACGTGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RFFSLSRRYSPSSNN*APLASACGSRTCGS
Trigger: GCTGCCGCACGTGCGGCTGCCACAGGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGGTGAGTAACGGCGGGAAAGCGAGAAGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553564.5
ENST00000554949.1
ENST00000555670.1
ENST00000556442.1
CDS-3UTR CAA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCAATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQAMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS TCA 90 bp CCGGGTACTAAGGCGGCGAGCGCCTGCAGGCAGAGAAAGGTAGGTTaGTTTCCTGGCAGAAAGGAAAGTTGCTGGCAATCGCTAGGGCGG +
Preference number: 5 (lower is better)
Translates to: PGTKAASACRQRKVG*FPGRKESCWQSLGR
Trigger: CCGCCCTAGCGATTGCCAGCAACTTTCCTTTCTGCCAGGAAATCAACCTACCTTTCTCTGCCTGCAGGCGCTCGCCGCCTTAGTACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS-3UTR CAA 90 bp CCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: PAFPSWIPGSFSPGRHDRMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...TCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: YQHSPPGYQAASALAGTIKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CCTGTGGAAACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: PVETDAGVGCSFLPHPTDSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...ATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGTTTCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CAA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATTCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDSVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAATCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: HSPPGYQAASALAGTIEESVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...TTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: YQHSPPGYQAASALAGTIGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: PSWIPGSFSPGRHDRRKYKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...GTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp CAGGAGCTGACACGGGCACAACGATACAAATCCCTGTGGAAACAGATGCTGGCGAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: QELTRAQRYKSLWKQMLAKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...CGCCAGCATCTGTTTCCACAGGGATTTGTATCGTTGTGCCCGTGTCAGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CAA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp TACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATATGCAGGAAACCGGACTaGTTATCTACCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: YQHSPPGYQAASALAGTICRKPD*LSTWVT
Trigger: AGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCA...TATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: TDIWGYQHSPPGYQAASASHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...GGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCAACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GDTSIPLLDTRQLQPWQATSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...TGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: IWGYQHSPPGYQAASALAGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGCAGGAAACCGGACTaGTTATCTACCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: QTYGDTSIPLLDTRQLQPCRKPD*LSTWVT
Trigger: AGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCA...GGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ACAGATGCTGGCGTGGGCTGCAGCTTCCTGCCACATCCCACTGATTTTGGTCACTGCAGGAAACCGGACTaGTTATCTACCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: TDAGVGCSFLPHPTDFGHCRKPD*LSTWVT
Trigger: AGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCA...GTGACCAAAATCAGTGGGATGTGGCAGGAAGCTGCAGCCCACGCCAGCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000555640.6
CDS-3UTR CAA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: GYQHSPPGYQAASALAGTITGQC*HLILHS
Trigger: ACTATGGAGAATCAGGTGCAAACACTGACCAGTTAT...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGAGTGTAGCTCAGTTCTaGCCAATGGTAGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: GYQHSPPGYQAASALAGTSVAQF*PMVGSF
Trigger: AAAACTACCTACCATTGGCAAGAACTGAGCTACACT...CGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGATCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: AFPSWIPGSFSPGRHDRRSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...TCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp GACTTCTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCAGCCACCATCCAGTCTaGCTGCCATATACACCAGGC +
Preference number: 5 (lower is better)
Translates to: DFSFPLRTRSLASMRRLCSHHPV*LPYTPG
Trigger: GCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCT...GCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCTCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFSVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCCAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: QAASALAGTIEENTCYTSKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...GGATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp CCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCAAGCTACAGGCCAGGTaGGTCAACTGGGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: PGSFSPGRHDRRKYLLHIKLQAR*VNWGQG
Trigger: CCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTT...GATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCATCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: IWGYQHSPPGYQAASALASSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp GATGGTACGCCTGTGAGAAGCTACAGGCCAGGTTGGTCAACTGGGGACAAGGGATCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: DGTPVRSYRPGWSTGDKGSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...TCCCTTGTCCCCAGTTGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDITGQC*HLILHS
Trigger: ACTATGGAGAATCAGGTGCAAACACTGACCAGTTAT...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGTGTAGCTCAGTTCTaGCCAATGGTAGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: IPAFPSWIPGSFSPGRHDSVAQF*PMVGSF
Trigger: AAAACTACCTACCATTGGCAAGAACTGAGCTACACT...ATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGTGTAGCTCAGTTCTaGCCAATGGTAGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: HMGIPAFPSWIPGSFSPGSVAQF*PMVGSF
Trigger: AAAACTACCTACCATTGGCAAGAACTGAGCTACACT...GCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp TCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATTCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: SPPGYQAASALAGTIEENSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...ATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp CCGTTTAAGGACAGGCTGAGTGATACGGGGCCAGCGATGAGCCTCCTCTGGAGAATACCTTCTTCTGCCTaGCCTAATCTGATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: PFKDRLSDTGPAMSLLWRIPSSA*PNLMEE
Trigger: TTCTTCCATCAGATTAGGCAAGGCAGAAGAAGGTAT...TCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAGCCTGTCCTTAAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS TCA 90 bp ACTGGAAGTCAGGACCTAGGGAGAACAGGGCTCAGATCCAATATCTaGATATACTGCCCACCCAGTCCTCCCCGACTCCACCTAAGAAAA +
Preference number: 5 (lower is better)
Translates to: TGSQDLGRTGLRSNI*IYCPPSPPRLHLRK
Trigger: TTTTCTTAGGTGGAGTCGGGGAGGACTGGGTGGGCAGTATATTCAGATATTGGATCTGAGCCCTGTTCTCCCTAGGTCCTGACTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557279.1
CDS GCA 90 bp GGTTGGAAGTTAAGGGACTTTCACCTCATGGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAGTCTTGCTGCCATATACACCAGGCT +
Preference number: 5 (lower is better)
Translates to: GWKLRDFHLMECSGD*CKATIQSCCHIHQA
Trigger: AGCCTGGTGTATATGGCAGCAAGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGGTGAAAGTCCCTTAACTTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553536.5
ENST00000554588.5
ENST00000554985.5
CDS-3UTR CAA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPTSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp TACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: YQAASALAGTIEENTCYTSVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...TGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GCAGCTGATCTGTCCACACACATATATTCACGTAGGCTCTGGCCCCAAATACTGGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: AADLSTHIYSRRLWPQILGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...CAGTATTTGGGGCCAGAGCCTACGTGAATATATGTGTGTGGACAGATCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGGCTGTGCCCAGCTTTaGTTCCATTCTCCACCAGTA +
Preference number: 5 (lower is better)
Translates to: QTNTDIWGYQHSPPGYQAGCAQL*FHSPPV
Trigger: TACTGGTGGAGAATGGAACAAAAGCTGGGCACAGCC...TGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS TCA 90 bp TTACGTAGTGCGTGTAGCACTGCTCCACGAAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGAACAAGGACTGGAAGTCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: LRSACSTAPRSFSSV*DKSVVRTRTGSQDL
Trigger: CAGGTCCTGACTTCCAGTCCTTGTTCTCACCACAGACTTATCTCAGACAGAGGAGAAACTTCGTGGAGCAGTGCTACACGCACTACGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000554588.5
ENST00000554949.1
ENST00000555177.5
ENST00000555390.6
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: HRHMGIPAFPSWIPGSFSITGQC*HLILHS
Trigger: ACTATGGAGAATCAGGTGCAAACACTGACCAGTTAT...GCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTAGTGTAGCTCAGTTCTaGCCAATGGTAGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: RHMGIPAFPSWIPGSFSPSVAQF*PMVGSF
Trigger: AAAACTACCTACCATTGGCAAGAACTGAGCTACACT...AGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CTCTTTTCCCTTAAGGACCAGATCCCTGGCATCCATGAGAAGGCTGTGCCCAGCAGTGTAGCTCAGTTCTaGCCAATGGTAGGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: LFSLKDQIPGIHEKAVPSSVAQF*PMVGSF
Trigger: AAAACTACCTACCATTGGCAAGAACTGAGCTACACT...GCTGGGCACAGCCTTCTCATGGATGCCAGGGATCTGGTCCTTAAGGGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp GATGGAGGAAACGCAGACGGAGTAAGCACAGGTAAAAGATCTCCCCAGGAGCTGACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: DGGNADGVSTGKRSPQELTSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...CAGCTCCTGGGGAGATCTTTTACCTGTGCTTACTCCGTCTGCGTTTCCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: TQTYGDTSIPLLDTRQLQTSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...CTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCATCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: ISNKHRHMGIPAFPSWIPSVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...TGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCTCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: KHRHMGIPAFPSWIPGSFSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...GAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp CAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTTCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: QTQTYGDTSIPLLDTRQLSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...AAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000556733.1
ENST00000557550.6
CDS-3UTR CAA 90 bp ATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTTCAGCCCTGGCATTTCTAGAGCTAAAATaGACCAAGATAGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: IWGYQHSPPGYQAASALAFLELK*TKIGLK
Trigger: CTTCAGCCCTATCTTGGTCAATTTTAGCTCTAGAAA...TGCCAGGGCTGAAGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS-3UTR CAA 90 bp TCCTCATCAACTCTCAGAGGGATCCTGAGCCGTAGATGGAGGAAACGCAGACGGTCCAGTCTGTTAATTTaGGAGTGGTGTAAGTATGGC +
Preference number: 5 (lower is better)
Translates to: SSSTLRGILSRRWRKRRRSSLLI*EWCKYG
Trigger: GCCATACTTACACCACTCCAAAATTAACAGACTGGA...CCGTCTGCGTTTCCTCCATCTACGGCTCAGGATCCCTCTGAGAGTTGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555640.6
CDS TCA 90 bp GCACTGCTCCACGAAGTTTCTCCTCTGTCTGAGATAAGTCTGTGGTaGGAACAAGGACTGGAAGTCAGGACCTGGGTTTTCCAGGAATTT +
Preference number: 5 (lower is better)
Translates to: ALLHEVSPLSEISLW*EQGLEVRTWVFQEF
Trigger: AAATTCCTGGAAAACCCAGGTCCTGACTTCCAGTCCTTGTTCTCACCACAGACTTATCTCAGACAGAGGAGAAACTTCGTGGAGCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000554588.5
ENST00000554949.1
ENST00000555177.5
ENST00000555390.6
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS TCA 90 bp TTACGTAGTGCGTGTAGCACTGCTCCACGAAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGAACAAGGACTGGAAGTCAGGACCTA +
Preference number: 5 (lower is better)
Translates to: LRSACSTAPRSFSSV*DKSVVRTRTGSQDL
Trigger: TAGGTCCTGACTTCCAGTCCTTGTTCTCACCACAGACTTATCTCAGACAGAGGAGAAACTTCGTGGAGCAGTGCTACACGCACTACGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557279.1
CDS-3UTR CAA 90 bp ATACCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACTGCAGGAAACCGGACTaGTTATCTACCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: IPGSFSPGRHDRRKYLLHCRKPD*LSTWVT
Trigger: AGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCA...GTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACATGCCTAGCCCGTCTTaGCAACTCCTCTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYMPSPS*QLLWLY
Trigger: GTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCAT...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp ACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAGCTACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: TNTDIWGYQHSPPGYQAATSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...AGCTGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp AAATCTCAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACTCAGTGCGGTCAGCCTaGCTGGGCAGTTCACTTAAG +
Preference number: 5 (lower is better)
Translates to: KSQTNTDIWGYQHSPPGYSVRSA*LGSSLK
Trigger: CTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA...GTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTGCGGTCAGACATCAAACTGCACCTaGGGTGATACAGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: PGNDLSYAIRFELPQCGQTSNCT*GDTGRN
Trigger: GTTTCTACCTGTATCACCCAAGGTGCAGTTTGATGT...CTGACCGCACTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CCACCAGTACCAGGAAATGACCTGTCTTACGCCATAAGGTTTGAACTACCTCAGTCTTCCTTTGGTTTCTaGTTCCAGCTGAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: PPVPGNDLSYAIRFELPQSSFGF*FQLKGM
Trigger: CATCCCCTTCAGCTGGAACAAGAAACCAAAGGAAGA...CTGAGGTAGTTCAAACCTTATGGCGTAAGACAGGTCATTTCCTGGTACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555533.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CTTTCAGTAGTTTTTCTGCCAAAACCAACATGGCAGCTGATCTGTCCACACACATGCAGGAAACCGGACTaGTTATCTACCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LSVVFLPKPTWQLICPHTCRKPD*LSTWVT
Trigger: AGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCA...TGTGTGTGGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTACTGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555533.6
ENST00000555640.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CAAACAAACACAGACATATGGGGATACCAGCATTCCCCTCCTGGATACCAGGCAATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: QTNTDIWGYQHSPPGYQAITGQC*HLILHS
Trigger: ACTATGGAGAATCAGGTGCAAACACTGACCAGTTAT...TGCCTGGTATCCAGGAGGGGAATGCTGGTATCCCCATATGTCTGTGTTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS-3UTR CAA 90 bp CCAGGCAGCTTCAGCCCTGGCAGGCACGATAGAAGAAAATACTTGTTACACATCATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: PGSFSPGRHDRRKYLLHIITGQC*HLILHS
Trigger: ACTATGGAGAATCAGGTGCAAACACTGACCAGTTAT...GATGTGTAACAAGTATTTTCTTCTATCGTGCCTGCCAGGGCTGAAGCTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
CDS GCA 72 bp TCGCTAGGGCGGGGGCTGCCAGGAGCGCTCCTCCTCTaGGCGGAGATGTCTCTGCAGATCCAGAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLGRGLPGALLL*AEMSLQIQSLS
Trigger: GGAGAGACTCTGGATCTGCAGAGACATCTCCGCGCAGAGGAGGAGCGCTCCTGGCAGCCCCCGCCCTAGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS TCA 72 bp AAAGATCTCCCCAGGAGCTGCCGTGCCGGCGGGCTGTaGGCACAGCATGCTGCATGTGCCCATCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: KDLPRSCRAGGL*AQHAACAHLDS
Trigger: GCTGTCCAGATGGGCACATGCAGCATGCTGTGCTCACAGCCCGCCGGCACGGCAGCTCCTGGGGAGATCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556670.6
ENST00000556733.1
CDS CCA 72 bp GGCCTCTTCTGCAGGAAACCGGACTTGTTATCTACCTaGGTCACTCCGGGTACTAAGGCGGCGAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: GLFCRKPDLLST*VTPGTKAASAR
Trigger: CCGGGCGCTCGCCGCCTTAGTACCCGGAGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCAGAAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000553441.5
ENST00000553536.5
ENST00000554588.5
ENST00000554949.1
ENST00000554985.5
ENST00000555177.5
ENST00000555533.6
ENST00000555640.6
ENST00000555670.1
ENST00000556442.1
ENST00000556670.6
ENST00000557550.6
ENST00000557701.5
CDS CCA 72 bp TCCATAGTGGGCCCAGCGCTCCCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCCTGTGGCAGCCGCACG +
Preference number: 6 (lower is better)
Translates to: SIVGPALPSSNN*APLASACGSRT
Trigger: CGTGCGGCTGCCACAGGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGGGAGCGCTGGGCCCACTATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000553441.5
ENST00000553536.5
ENST00000554283.1
ENST00000554588.5
ENST00000554985.5
ENST00000555177.5
ENST00000555533.6
ENST00000555640.6
ENST00000556670.6
ENST00000557550.6
ENST00000557701.5
CDS CCA 72 bp GGCCTCTTCTGCAGGAAACCGGACTTGTTATCTACCTaGGTCACTCCGGGTACTAAGGCGGCGAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: GLFCRKPDLLST*VTPGTKAASAC
Trigger: GCAGGCGCTCGCCGCCTTAGTACCCGGAGTGACCCAGGTAGATAACAAGTCCGGTTTCCTGCAGAAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553564.5
ENST00000554283.1
CDS GCA 72 bp TGCCAGGAGCGCTCCTCCTCTGCGCGGAGATGTCTCTaGAGATCCAGAGTCTCTCCGACAGCAGGGAATGTA +
Preference number: 6 (lower is better)
Translates to: CQERSSSARRCL*RSRVSPTAGNV
Trigger: TACATTCCCTGCTGTCGGAGAGACTCTGGATCTGCAGAGACATCTCCGCGCAGAGGAGGAGCGCTCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS CCA 72 bp TCGCTTTCCCGCCGTTACTCACCAAGTAGCAATAACTaGGCACCGTTAGCCAGTGCCTGTGGCAGCCGCACG +
Preference number: 6 (lower is better)
Translates to: SLSRRYSPSSNN*APLASACGSRT
Trigger: CGTGCGGCTGCCACAGGCACTGGCTAACGGTGCCCAGTTATTGCTACTTGGTGAGTAACGGCGGGAAAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553564.5
ENST00000554949.1
ENST00000555670.1
ENST00000556442.1
CDS CAA 90 bp CTGCAGGCAGAGAAAGGTAGGTTGATTTCCTGGCAGAAAGGAAAGTaGCTGGCAATCGCTAGGGCGGGGGCTGCCAGGAGCGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LQAEKGRLISWQKGK*LAIARAGAARSAPP
Trigger: AGGAGGAGCGCTCCTGGCAGCCCCCGCCCTAGCGATTGCCAGCAACTTTCCTTTCTGCCAGGAAATCAACCTACCTTTCTCTGCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS CAA 90 bp TGGGCCCAGCGCTCCCTATGGGCCAAAGACGAAAAGCGGAATCACTaGCATGTAGGTCCAGTCCCGTTTCTTCTCGCTTTCCCGCCGTTA +
Preference number: 6 (lower is better)
Translates to: WAQRSLWAKDEKRNH*HVGPVPFLLAFPPL
Trigger: TAACGGCGGGAAAGCGAGAAGAAACGGGACTGGACCTACATGCAAGTGATTCCGCTTTTCGTCTTTGGCCCATAGGGAGCGCTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553564.5
ENST00000554949.1
ENST00000555670.1
ENST00000556442.1
CDS CAA 72 bp GAGAAAGGTAGGTTGATTTCCTGGCAGAAAGGAAAGTaGCTGGCAATCGCTAGGGCGGGGGCTGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: EKGRLISWQKGK*LAIARAGAARS
Trigger: GCTCCTGGCAGCCCCCGCCCTAGCGATTGCCAGCAACTTTCCTTTCTGCCAGGAAATCAACCTACCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS TCA 72 bp CAGGACCTAGGGAGAACAGGGCTCAGATCCAATATCTaGATATACTGCCCACCCAGTCCTCCCCGACTCCAC +
Preference number: 6 (lower is better)
Translates to: QDLGRTGLRSNI*IYCPPSPPRLH
Trigger: GTGGAGTCGGGGAGGACTGGGTGGGCAGTATATTCAGATATTGGATCTGAGCCCTGTTCTCCCTAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557279.1
CDS TCA 72 bp AAGGCGGCGAGCGCCTGCAGGCAGAGAAAGGTAGGTTaGTTTCCTGGCAGAAAGGAAAGTTGCTGGCAATCG +
Preference number: 6 (lower is better)
Translates to: KAASACRQRKVG*FPGRKESCWQS
Trigger: CGATTGCCAGCAACTTTCCTTTCTGCCAGGAAATCAACCTACCTTTCTCTGCCTGCAGGCGCTCGCCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS CCA 72 bp GAGCGCCTGCAGGCAGAGAAAGGTAGGTTGATTTCCTaGCAGAAAGGAAAGTTGCTGGCAATCGCTAGGGCG +
Preference number: 6 (lower is better)
Translates to: ERLQAEKGRLIS*QKGKLLAIARA
Trigger: CGCCCTAGCGATTGCCAGCAACTTTCCTTTCTGCCAGGAAATCAACCTACCTTTCTCTGCCTGCAGGCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553564.5
ENST00000554283.1
ENST00000554751.5
CDS CAA 90 bp TGGCTCTACAGGCAAATGTCTGCTCCAGAGATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGTGGGCCCAGCGCTCCCTATGGGCCA +
Preference number: 6 (lower is better)
Translates to: WLYRQMSAPEITGQC*HLILHSGPSAPYGP
Trigger: TGGCCCATAGGGAGCGCTGGGCCCACTATGGAGAATCAGGTGCAAACACTGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553564.5
ENST00000554949.1
ENST00000555670.1
ENST00000556442.1
CDS CAA 90 bp TGGCTCTACAGGCAAATGTCTGCTCCAGAGATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGTGGGCCCAGCGCTCCCTGGGTCACT +
Preference number: 6 (lower is better)
Translates to: WLYRQMSAPEITGQC*HLILHSGPSAPWVT
Trigger: AGTGACCCAGGGAGCGCTGGGCCCACTATGGAGAATCAGGTGCAAACACTGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554751.5
CDS CAA 72 bp AGGCAAATGTCTGCTCCAGAGATAACTGGTCAGTGTTaGCACCTGATTCTCCATAGTGGGCCCAGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: RQMSAPEITGQC*HLILHSGPSAP
Trigger: GGGAGCGCTGGGCCCACTATGGAGAATCAGGTGCAAACACTGACCAGTTATCTCTGGAGCAGACATTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000553441.5
ENST00000553536.5
ENST00000553564.5
ENST00000554283.1
ENST00000554588.5
ENST00000554751.5
ENST00000554949.1
ENST00000554985.5
ENST00000555177.5
ENST00000555533.6
ENST00000555640.6
ENST00000555670.1
ENST00000556442.1
ENST00000556670.6
ENST00000557550.6
ENST00000557701.5
CDS CAA 72 bp CGCTCCCTATGGGCCAAAGACGAAAAGCGGAATCACTaGCATGTAGGTCCAGTCCCGTTTCTTCTCGCTTTC +
Preference number: 6 (lower is better)
Translates to: RSLWAKDEKRNH*HVGPVPFLLAF
Trigger: GAAAGCGAGAAGAAACGGGACTGGACCTACATGCAAGTGATTCCGCTTTTCGTCTTTGGCCCATAGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553564.5
ENST00000554949.1
ENST00000555670.1
ENST00000556442.1
CDS TCA 72 bp GCGTGTAGCACTGCTCCACGAAGTTTCTCCTCTGTCTaGGATAAGTCTGTGGTGAGAACAAGGACTGGAAGT +
Preference number: 6 (lower is better)
Translates to: ACSTAPRSFSSV*DKSVVRTRTGS
Trigger: ACTTCCAGTCCTTGTTCTCACCACAGACTTATCTCAGACAGAGGAGAAACTTCGTGGAGCAGTGCTACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000554588.5
ENST00000554949.1
ENST00000555177.5
ENST00000555390.6
ENST00000555533.6
ENST00000555640.6
ENST00000557279.1
ENST00000557550.6
CDS CAA 72 bp CCCCCAACTCTCTTTCTAAAGTCTACCTTTGCTTTCTaGTGCACCTCTTCTGGGCCCCCTTACCTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: PPTLFLKSTFAF*CTSSGPPYLSS
Trigger: AGAACTGAGGTAAGGGGGCCCAGAAGAGGTGCACAAGAAAGCAAAGGTAGACTTTAGAAAGAGAGTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555177.5
ENST00000557701.5
CDS GCA 72 bp GTCTTTGCAACTCCTCTGGCTCTACAGGCAAATGTCTaGTCCAGAGATAACTGGTCAGTGTTTGCACCTGAT +
Preference number: 6 (lower is better)
Translates to: VFATPLALQANV*SRDNWSVFAPD
Trigger: ATCAGGTGCAAACACTGACCAGTTATCTCTGGAGCAGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000553441.5
ENST00000553536.5
ENST00000553564.5
ENST00000554283.1
ENST00000554588.5
ENST00000554751.5
ENST00000554949.1
ENST00000554985.5
ENST00000555177.5
ENST00000555533.6
ENST00000555640.6
ENST00000555670.1
ENST00000556442.1
ENST00000556670.6
ENST00000557550.6
ENST00000557701.5
CDS GCA 72 bp TTAAGGGACTTTCACCTCATGGAATGCTCTGGAGACTaGTGCAAAGCCACCATCCAGTCTTGCTGCCATATA +
Preference number: 6 (lower is better)
Translates to: LRDFHLMECSGD*CKATIQSCCHI
Trigger: TATATGGCAGCAAGACTGGATGGTGGCTTTGCAGCAGTCTCCAGAGCATTCCATGAGGTGAAAGTCCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553536.5
ENST00000554588.5
ENST00000554985.5
CDS CCA 72 bp TTTCTCAAGATGCCTAGCCCGTCTTTGCAACTCCTCTaGCTCTACAGGCAAATGTCTGCTCCAGAGATAACT +
Preference number: 6 (lower is better)
Translates to: FLKMPSPSLQLL*LYRQMSAPEIT
Trigger: AGTTATCTCTGGAGCAGACATTTGCCTGTAGAGCCAGAGGAGTTGCAAAGACGGGCTAGGCATCTTGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000339374.11
ENST00000382985.8
ENST00000553441.5
ENST00000553536.5
ENST00000553564.5
ENST00000554283.1
ENST00000554588.5
ENST00000554751.5
ENST00000554949.1
ENST00000554985.5
ENST00000555177.5
ENST00000555533.6
ENST00000555640.6
ENST00000555670.1
ENST00000556442.1
ENST00000556670.6
ENST00000557550.6
ENST00000557701.5
CDS CAA 90 bp AATTGTACTCCCCCAACTCTCTTTCTAAAGTCTACCTTTGCTTTCTaGTGCACCTCTTCTGGGCCCCCTTACCTCAGTTCTTGCCAATGG +
Preference number: 6 (lower is better)
Translates to: NCTPPTLFLKSTFAF*CTSSGPPYLSSCQW
Trigger: CCATTGGCAAGAACTGAGGTAAGGGGGCCCAGAAGAGGTGCACAAGAAAGCAAAGGTAGACTTTAGAAAGAGAGTTGGGGGAGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557701.5
CDS CAA 90 bp GAAAACTACTTTATGAATAGGGAACTGATGGTCAAAAAGTTCAGGTaGGAAGTTAAGGGACTTTCACCTCATGGAATGCTCTGGAGACTG +
Preference number: 6 (lower is better)
Translates to: ENYFMNRELMVKKFR*EVKGLSPHGMLWRL
Trigger: CAGTCTCCAGAGCATTCCATGAGGTGAAAGTCCCTTAACTTCCAACCTGAACTTTTTGACCATCAGTTCCCTATTCATAAAGTAGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553536.5
ENST00000554588.5
CDS CAA 72 bp TTTATGAATAGGGAACTGATGGTCAAAAAGTTCAGGTaGGAAGTTAAGGGACTTTCACCTCATGGAATGCTC +
Preference number: 6 (lower is better)
Translates to: FMNRELMVKKFR*EVKGLSPHGML
Trigger: GAGCATTCCATGAGGTGAAAGTCCCTTAACTTCCAACCTGAACTTTTTGACCATCAGTTCCCTATTCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553536.5
ENST00000554588.5