RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METTL16 (Homo sapiens)

Ensembl gene IDs: ENSG00000127804

Ensembl transcript IDs: ENST00000263092.11, ENST00000571298.5, ENST00000571332.5, ENST00000571669.6, ENST00000574623.1, ENST00000574752.5, ENST00000576556.5, ENST00000576976.2, ENST00000577148.1

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCAAAACGCGGCCCTGCCCAGGACACACAGCAGAGGTCTGGAGTaGGGACAGTGCGGCCAGCATGTGTGGGGAAGGAAGCAGGCTGAC +
Preference number: 1 (lower is better)
Translates to: CQNAALPRTHSRGLE*GQCGQHVWGRKQAD
Trigger: GTCAGCCTGCTTCCTTCCCCACACATGCTGGCCGCACTGTCCCCACTCCAGACCTCTGCTGTGTGTCCTGGGCAGGGCCGCGTTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 90 bp GTACTGTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTaGGCTGCCGAACTGCTCAGAAGCCTCTTGGTCCTGGGCTCCGTT +
Preference number: 1 (lower is better)
Translates to: VLSGHSWETFPPFSH*AAELLRSLLVLGSV
Trigger: AACGGAGCCCAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR GCA 90 bp TTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATaGCAAGGTCACCAGCTTCCCGTCCTGACCAACAGCCACCTCTCA +
Preference number: 1 (lower is better)
Translates to: FLCLCRGPDLAAAKT*QGHQLPVLTNSHLS
Trigger: TGAGAGGTGGCTGTTGGTCAGGACGGGAAGCTGGTGACCTTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 90 bp CCCATCTTGAAGAGTGACCTAGAACAGGGTACCAGGGCCTCCAGCTaGAGGCAGAGAGAGCCACCCCTCCTCAAGAAACACCCTTGGGTG +
Preference number: 1 (lower is better)
Translates to: PILKSDLEQGTRASS*RQREPPLLKKHPWV
Trigger: CACCCAAGGGTGTTTCTTGAGGAGGGGTGGCTCTCTCTGCCTCCAGCTGGAGGCCCTGGTACCCTGTTCTAGGTCACTCTTCAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 90 bp GCTGGAGGCAGAGAGAGCCACCCCTCCTCAAGAAACACCCTTGGGTaGCAGAGACAGCATGATATTCTAGGCAGTGCTGCCCAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: AGGRESHPSSRNTLG*QRQHDILGSAAQPR
Trigger: TCTGGGCTGGGCAGCACTGCCTAGAATATCATGCTGTCTCTGTCACCCAAGGGTGTTTCTTGAGGAGGGGTGGCTCTCTCTGCCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 90 bp CTCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTaGCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAAGGTCAC +
Preference number: 1 (lower is better)
Translates to: LHSQVKAQQFRFLCL*RGPDLAAAKTCQGH
Trigger: GTGACCTTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 90 bp GACTCCACAAACAACCCTTCTGACCTTGCAGAGGCAGTCCAGAGCTaGGGGGCCAGCTTGAGCCAGCTTGCAATCCCTCGGGAGTTTACT +
Preference number: 1 (lower is better)
Translates to: DSTNNPSDLAEAVQS*GASLSQLAIPREFT
Trigger: AGTAAACTCCCGAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGCTCTGGACTGCCTCTGCAAGGTCAGAAGGGTTGTTTGTGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
3UTR TCA 90 bp GCTCCCTTTGTGGGATTGATGCAAGGTAGGCCCCATCTTGAAGAGTaGCCTAGAACAGGGTACCAGGGCCTCCAGCTGGAGGCAGAGAGA +
Preference number: 1 (lower is better)
Translates to: APFVGLMQGRPHLEE*PRTGYQGLQLEAER
Trigger: TCTCTCTGCCTCCAGCTGGAGGCCCTGGTACCCTGTTCTAGGTCACTCTTCAAGATGGGGCCTACCTTGCATCAATCCCACAAAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 90 bp GGTCACCAGCTTCCCGTCCTGACCAACAGCCACCTCTCAGAAGGCTaGCTTAACTACTCAGCCCCAGTCTTCTTAGCAGATGGCAAGGAG +
Preference number: 1 (lower is better)
Translates to: GHQLPVLTNSHLSEG*LNYSAPVFLADGKE
Trigger: CTCCTTGCCATCTGCTAAGAAGACTGGGGCTGAGTAGTTAAGCCAGCCTTCTGAGAGGTGGCTGTTGGTCAGGACGGGAAGCTGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 90 bp GCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCAGACTCTaGTGCTCCTTCCCAGCATTACTAAGGTTTCTCTCCCAGATTCCC +
Preference number: 1 (lower is better)
Translates to: ARCQECAIYRVVPRL*CSFPALLRFLSQIP
Trigger: GGGAATCTGGGAGAGAAACCTTAGTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 90 bp CTCCCAGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTaGTGCAAGGTAGGCCCCATCTTGAAGAGTGACCTAGAACAGGGT +
Preference number: 1 (lower is better)
Translates to: LPDSPPPTIQLPLWD*CKVGPILKSDLEQG
Trigger: ACCCTGTTCTAGGTCACTCTTCAAGATGGGGCCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 90 bp CAACGACTATGCCTTCCGCCGTCTCCGAGCGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTA +
Preference number: 1 (lower is better)
Translates to: QRLCLPPSPSAEVML*GIIPSSRTPAPRML
Trigger: TAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGCGGAAGGCATAGTCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR GCA 90 bp AGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCAGACTCTGCTaGTCCTTCCCAGCATTACTAAGGTTTCTCTCCCAGATTCCCCAC +
Preference number: 1 (lower is better)
Translates to: RCQECAIYRVVPRLC*SFPALLRFLSQIPH
Trigger: GTGGGGAATCTGGGAGAGAAACCTTAGTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCACATTCCTGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 90 bp CACCTGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTaGCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCC +
Preference number: 1 (lower is better)
Translates to: HLGGNCEKQQMLFCH*PENHSVWPAQRWFS
Trigger: GGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR GCA 90 bp CAAGAAGCCAACCACACCTGGGAGGGAACTGTGAGAAGCAACAGATaGTGTTCTGTCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTC +
Preference number: 1 (lower is better)
Translates to: QEANHTWEGTVRSNR*CSVTARKIIQSGQL
Trigger: GAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CCA 90 bp CTTAACGTTTATCAAACACTTAAACAGGTACTGTCCGGCCACTCCTaGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTGCTC +
Preference number: 1 (lower is better)
Translates to: LNVYQTLKQVLSGHS*ETFPPFSHWAAELL
Trigger: GAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAGTACCTGTTTAAGTGTTTGATAAACGTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CCA 90 bp ACACTTCAGCTGGGAATCTCCAGGCAACAAGAAGCCAACCACACCTaGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCC +
Preference number: 1 (lower is better)
Translates to: TLQLGISRQQEANHT*EGTVRSNRCCSVTA
Trigger: GGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGATTCCCAGCTGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR TCA 90 bp GAATCTCCAGGCAACAAGAAGCCAACCACACCTGGGAGGGAACTGTaGGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCATTC +
Preference number: 1 (lower is better)
Translates to: ESPGNKKPTTPGREL*EATDAVLSLPGKSF
Trigger: GAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR GCA 90 bp GTGCAAAGCTGGTTCATCAGATCCCTGTTCTGGCCCTCAACCCAGTaGATCTCCACTAAGGCATCGTCCACCTCCTTCTTAACGTTTATC +
Preference number: 1 (lower is better)
Translates to: VQSWFIRSLFWPSTQ*ISTKASSTSFLTFI
Trigger: GATAAACGTTAAGAAGGAGGTGGACGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCAGAACAGGGATCTGATGAACCAGCTTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CCA 90 bp CTCACAGAGCTTTTAGAAGTAACTCTAGGAGGTACATGGACTCTCTaGAGGTCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: LTELLEVTLGGTWTL*RSTDQVKNTGQRLG
Trigger: TCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGTTACTTCTAAAAGCTCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 90 bp ACACACATGCTCACAGAGCTTTTAGAAGTAACTCTAGGAGGTACATaGACTCTCTGGAGGTCCACGGACCAGGTTAAGAACACTGGTCAG +
Preference number: 1 (lower is better)
Translates to: THMLTELLEVTLGGT*TLWRSTDQVKNTGQ
Trigger: CTGACCAGTGTTCTTAACCTGGTCCGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGTTACTTCTAAAAGCTCTGTGAGCATGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 90 bp AAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCATTCAGTCTaGCCAGCTCAGAGGTGGTTTTCCTTTACCTATAGCAGCATGGTA +
Preference number: 1 (lower is better)
Translates to: KQQMLFCHCPENHSV*PAQRWFSFTYSSMV
Trigger: TACCATGCTGCTATAGGTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CCA 90 bp GTTCTCTCACTAGGTAGCCTAAGAAAATCTTCTCAGGGAAGGAAATaGAAACATCCAAATGCACAGAAGGCACTCGGCTCCAGACTGAAA +
Preference number: 1 (lower is better)
Translates to: VLSLGSLRKSSQGRK*KHPNAQKALGSRLK
Trigger: TTTCAGTCTGGAGCCGAGTGCCTTCTGTGCATTTGGATGTTTCCATTTCCTTCCCTGAGAAGATTTTCTTAGGCTACCTAGTGAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 90 bp CACAGGCCACTCCAAAGCAAGTTACTATCAACACGTTTCCAACTGTaGAGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTT +
Preference number: 1 (lower is better)
Translates to: HRPLQSKLLSTRFQL*RRFLVNCNKPENLV
Trigger: AACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCTGCACAGTTGGAAACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR GCA 90 bp TTACTATCAACACGTTTCCAACTGTGCAGGAGGTTTCTAGTTAACTaGAACAAGCCTGAAAATTTGGTTACGTATGTAGGTGCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: LLSTRFQLCRRFLVN*NKPENLVTYVGAKL
Trigger: CAGCTTTGCACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCTGCACAGTTGGAAACGTGTTGATAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR TCA 90 bp AATACTTGTAAGATGTTAAATGAACAAAGGACCAGAATACAAAACTaGATACGCAGCATGAGGACAACCAAAGTTAAACCCACACACTCA +
Preference number: 1 (lower is better)
Translates to: NTCKMLNEQRTRIQN*IRSMRTTKVKPTHS
Trigger: TGAGTGTGTGGGTTTAACTTTGGTTGTCCTCATGCTGCGTATTCAGTTTTGTATTCTGGTCCTTTGTTCATTTAACATCTTACAAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 90 bp CCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGCTTaGATAAAAGGGCCAAGGGTGCCCTCGTGTGGCCACGGAGGGAAA +
Preference number: 2 (lower is better)
Translates to: PWTDLSPFPRGSEGA*IKGPRVPSCGHGGK
Trigger: TTTCCCTCCGTGGCCACACGAGGGCACCCTTGGCCCTTTTATCAAAGCGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTCCGTTGCTAGAGCCTTaGCAACTTTCCAAAACCTCC +
Preference number: 2 (lower is better)
Translates to: VRPLLGDVSPFQPLGCRTPLLEP*QLSKTS
Trigger: GGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGG...AGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR GCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCGCTGCTGCCAAGACATaGCAAGGTCACCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: STAKLRHSSSASCVSAEGAAAKT*QGHQLP
Trigger: GGGAAGCTGGTGACCTTGGCATGTCTTGGCAGCAGC...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCGTGCCATTTACCGGGTaGTCCCCAGACTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: STAKLRHSSSASCVSAEGVPFTG*SPDSAA
Trigger: AGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCAC...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAACAGGTGTCAGGAATGTaGCATTTACCGGGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQQVSGM*HLPGGP
Trigger: GGGACCACCCGGTAAATGGCACATTCCTGACACCTG...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCCGCTTCCTGTGTCTCTaGCGAGGGCCTGATCTAGCT +
Preference number: 2 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSRFLCL*RGPDLA
Trigger: AGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGGTGACAGAGACAGCATaGTATTCTAGGCAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGVTETA*YSRQCC
Trigger: GCAGCACTGCCTAGAATATCATGCTGTCTCTGTCAC...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR GCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTAGGTGGGGGTATGGGTaGCTTCTGTGTGCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSRWGYG*LLCASV
Trigger: GACTGAGGCACACAGAAGGCACCCATACCCCCACCT...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 90 bp TTTCCCCCTTTCAGCCACTGGGCTGCCGAACTGCTCAGAAGCCTCTaGGTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAAC +
Preference number: 2 (lower is better)
Translates to: FPPFSHWAAELLRSL*VLGSVARALTTFQN
Trigger: GTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR TCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCGTGACAGAGACAGCATaGTATTCTAGGCAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGVTETA*YSRQCC
Trigger: GCAGCACTGCCTAGAATATCATGCTGTCTCTGTCAC...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTGCTCGTGGTGATGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 2 (lower is better)
Translates to: GHSWETFPPFSHWAAELLVVMVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCATCACCAC...GAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR GCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCTCAGAGGCGCCAGGCTaGATTTCTTTCCCAGCATGC +
Preference number: 2 (lower is better)
Translates to: SERRGDALRDNSFITDASSEAPG*ISFPAC
Trigger: GCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGA...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCGTGAGAAGCAACAGATaGTGTTCTGTCACTGCCCGG +
Preference number: 2 (lower is better)
Translates to: VLGSVARALTTFQNLHPSVRSNR*CSVTAR
Trigger: CCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCAC...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CCA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAAAGTCTTCTTAGCAGATaGCAAGGAGCTCTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQSLLSR*QGALAK
Trigger: CTTGGCCAGAGCTCCTTGCCATCTGCTAAGAAGACT...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp GTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTGCACCACGAATGTTATaGGTTTTCTCGGTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: VRPLLGDVSPFQPLGCRTAPRML*VFSVSL
Trigger: TAGAGAAACCGAGAAAACCCATAACATTCGTGGTGC...AGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CAA 90 bp ACAACGACTATGCCTTCCGCCGTCTCCGAGCGCAGAGGTGATGCTTaGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTT +
Preference number: 2 (lower is better)
Translates to: TTTMPSAVSERRGDA*RDNSFITDASTTNV
Trigger: AACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGCGGAAGGCATAGTCGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR TCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCAGCTGAGGGGCCAGCTTaGGCCAGCTTGCAATCCCTC +
Preference number: 2 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPAEGPA*ASLQSL
Trigger: GAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGC...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
3UTR-3UTR TCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGCTCATTGTCCGACCTTaGCAGAATTCAGTGTACGTT +
Preference number: 2 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGLIVRP*QNSVYV
Trigger: AACGTACACTGAATTCTGTCAAGGTCGGACAATGAG...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCTATTCTAGGCAGTGCTaGCCAGCCCAGACTCCACAA +
Preference number: 2 (lower is better)
Translates to: SERRGDALRDNSFITDASYSRQC*PAQTPQ
Trigger: TTGTGGAGTCTGGGCTGGGCAGCACTGCCTAGAATA...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR GCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTGAGTTGAAAGGGTACTaGCAAAACGCGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAELKGY*QNAALP
Trigger: GGGCAGGGCCGCGTTTTGGCAGTACCCTTTCAACTC...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCCCCTCGGGAGTTTACTaGGGGCTTTCTGTTGTTACT +
Preference number: 2 (lower is better)
Translates to: SERRGDALRDNSFITDASPSGVY*GLSVVT
Trigger: AGTAACAACAGAAAGCCCTCAGTAAACTCCCGAGGG...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR TCA 90 bp TTCATCAGATCCCTGTTCTGGCCCTCAACCCAGTGCATCTCCACTAAGGCATCGCACAAACAACCCTTCTaGCCTTGCAGAGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: FIRSLFWPSTQCISTKASHKQPF*PCRGSP
Trigger: TGGACTGCCTCTGCAAGGTCAGAAGGGTTGTTTGTG...CGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCAGAACAGGGATCTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR TCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCACCCCATCTTGAAGAGTaGCCTAGAACAGGGTACCAG +
Preference number: 2 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPPHLEE*PRTGYQ
Trigger: CTGGTACCCTGTTCTAGGTCACTCTTCAAGATGGGG...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACCAGGGCCTCCAGCTaGAGGCAGAGAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDTRASS*RQREPP
Trigger: GGGTGGCTCTCTCTGCCTCCAGCTGGAGGCCCTGGT...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGGGAACTCGTTTATGCTaGACCTTCAAATCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGGTRLC*TFKSVR
Trigger: TCTCACTGATTTGAAGGTCCAGCATAAACGAGTTCC...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR CCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGTCTCCTGGGGGCCCCTaGCCAGTTCTTGGCTATTGC +
Preference number: 2 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLSPGGP*PVLGYC
Trigger: GCAATAGCCAAGAACTGGCCAGGGGCCCCCAGGAGA...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR TCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCAGAACCCTAGGCTGCTaGTGCAACATCAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPRTLGC*CNIKHS
Trigger: GCTGTGCTTGATGTTGCATCAGCAGCCTAGGGTTCT...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTGGGAATCCACGGTCCTaGATTGAGTCTTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAGNPRS*IESWLC
Trigger: ACAGAGCCAAGACTCAATTCAGGACCGTGGATTCCC...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCCACACCGGGGAGTTTTaGTTACCTAATTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSHTGEF*LPNSAS
Trigger: AGAAGCAGAATTAGGTAAGCAAAACTCCCCGGTGTG...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTATCTCAGCCTCACAGTaGTGGGATTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAISASQ*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTGTGAGGCTGAGAT...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTTCAGAGGCGCCAGGCTaGATTTCTTTCCCAGCATGC +
Preference number: 2 (lower is better)
Translates to: SFITDASTTNVMGFLGFSSEAPG*ISFPAC
Trigger: GCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGA...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCCCAGTTCTTGGCTATTaGCAGACTCTTTGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPPVLGY*QTLWGW
Trigger: CCACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGG...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR GCA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCATGCTGTTCTGTCACTaGCCGGAAAATCATTCAGTC +
Preference number: 2 (lower is better)
Translates to: VLGSVARALTTFQNLHPSMLFCH*PENHSV
Trigger: GACTGAATGATTTTCCGGGCAGTGACAGAACAGCAT...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCTCCTTTCATCCTCCGTaGGTTCCGGGTTTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPSFHPP*VPGFPP
Trigger: AGGAGGAAAACCCGGAACCCACGGAGGATGAAAGGA...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR CCA 90 bp TTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCCTTGGTGGTGACTGCTaGGCAGTGTGTGCAGACACT +
Preference number: 2 (lower is better)
Translates to: FLHHGRQHHECYGFSRFLLGGDC*AVCADT
Trigger: AGTGTCTGCACACACTGCCCAGCAGTCACCACCAAG...GAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR TCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCCCCTCGGGAGTTTACTaGGGGCTTTCTGTTGTTACT +
Preference number: 2 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPPSGVY*GLSVVT
Trigger: AGTAACAACAGAAAGCCCTCAGTAAACTCCCGAGGG...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
3UTR-3UTR TCA 90 bp TCAAGAAAACACCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGTCCTTAGTGGGTTATTaGCCCCTTTGTCTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: SRKHRGQTCLHSHGEVKASLVGY*PLCLCL
Trigger: CAGACACAGACAAAGGGGTCAATAACCCACTAAGGA...CGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp TCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACTGGGAACCCCTTGTATaGGAAGCTCCTCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: SLPGKSFSLASSEVVFLYWEPLV*EAPPSE
Trigger: CTCTGAAGGAGGAGCTTCGCATACAAGGGGTTCCCA...GTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR GCA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTTTACTTGGTGGTGACTaGTGGGCAGTGTGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: SFITDASTTNVMGFLGFSLLGGD*WAVCAD
Trigger: GTCTGCACACACTGCCCAGCAGTCACCACCAAGTAA...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CCA 90 bp ATCTCCAGGCAACAAGAAGCCAACCACACCTGGGAGGGAACTGTGAGAAGCAACTGGCCAGCTCAGAGGTaGTTTTCCTTTACCTATAGC +
Preference number: 2 (lower is better)
Translates to: ISRQQEANHTWEGTVRSNWPAQR*FSFTYS
Trigger: GCTATAGGTAAAGGAAAACCACCTCTGAGCTGGCCA...GTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR TCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATGGCAGGAGAATCGCTTaGACCCGGGAGGCGGGGGTT +
Preference number: 2 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNGRRIA*TREAGV
Trigger: AACCCCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAATCTCCTCCATGACATaGAGCCTTAAACCTAGGGAC +
Preference number: 2 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPISSMT*SLKPRD
Trigger: GTCCCTAGGTTTAAGGCTTCATGTCATGGAGGAGAT...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTTTTCAATCCATGTCGTaGCAACGACTATGCCTTCCG +
Preference number: 2 (lower is better)
Translates to: SFITDASTTNVMGFLGFSFQSMS*QRLCLP
Trigger: CGGAAGGCATAGTCGTTGTCACGACATGGATTGAAA...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACGTGGTCCCCAGACTCTaGTGCTCCTTCCCAGCATTA +
Preference number: 2 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDVVPRL*CSFPAL
Trigger: TAATGCTGGGAAGGAGCAGCAGAGTCTGGGGACCAC...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAATGGGTGCCTTCTGTGTaGCTCAGTCACACCGGGGAG +
Preference number: 2 (lower is better)
Translates to: PISSKKNLPTCTRGICYEWVPSV*LSHTGE
Trigger: CTCCCCGGTGTGACTGAGGCACACAGAAGGCACCCA...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACCAGGGAACTCGTTTATaGTGGACCTTCAAATCAGTG +
Preference number: 2 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDQGTRL*WTFKSV
Trigger: CACTGATTTGAAGGTCCAGCATAAACGAGTTCCCTG...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR CCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCCACCTCTCAGAAGGCTaGCTTAACTACTCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGHLSEG*LNYSAP
Trigger: TGGGGCTGAGTAGTTAAGCCAGCCTTCTGAGAGGTG...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAATCAAAAAGCCACTaGTCAGTATGCTGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPQSKSH*SVCCLL
Trigger: GAGAAGGCAGCATACTGACCAGTGGCTTTTTGATTG...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCACTCTAGGAGGTACATaGACTCTCTGGAGGTCCACG +
Preference number: 2 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGTLGGT*TLWRST
Trigger: CGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGT...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACGACAGTGGGGTGGTGTaGGCTGGCACAGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDDSGVV*AGTAEN
Trigger: ATTTTCTGCTGTGCCAGCCCACACCACCCCACTGTC...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 90 bp CTGACGGAGGCAAAGCAGATTCCGAAGAACAAAAGCAGCTTTAGTTaGCCTGGGCAACAGGCTCAACTTCTGTCTCCACTTCAGTTATCA +
Preference number: 2 (lower is better)
Translates to: LTEAKQIPKNKSSFS*PGQQAQLLSPLQLS
Trigger: TGATAACTGAAGTGGAGACAGAAGTTGAGCCTGTTGCCCAGGCAAACTAAAGCTGCTTTTGTTCTTCGGAATCTGCTTTGCCTCCGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp GATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGATTCCTCCTTGTAAATaGCCACACTACGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: DALRDNSFITDASTTNVMIPPCK*PHYDSL
Trigger: CAGGGAGTCGTAGTGTGGTCATTTACAAGGAGGAAT...CATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR TCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATTCTCTGCCGAGGGCCTaGTCTAGCTGCTGCCAAGAC +
Preference number: 2 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNSLPRA*SSCCQD
Trigger: GTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGA...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACTCCACGGTCCTGAATTaGGTCTTGGCTCTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDSTVLN*VLALCD
Trigger: GTCACACAGAGCCAAGACTCAATTCAGGACCGTGGA...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp TTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCA +
Preference number: 2 (lower is better)
Translates to: FLHHGRQHHECYGFSRFLAEVML*GIIPSS
Trigger: TGATGAAGGAATTATCCCTCAAAGCATCACCTCTGC...GAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR CCA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTCAGTGTACGTTACTTTaGGAACCCCTTGTATGCGAA +
Preference number: 2 (lower is better)
Translates to: SFITDASTTNVMGFLGFSQCTLL*EPLVCE
Trigger: TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTG...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR TCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCATTCCTCCTTGTAAATaGCCACACTACGACTCCCTG +
Preference number: 2 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGIPPCK*PHYDSL
Trigger: CAGGGAGTCGTAGTGTGGTCATTTACAAGGAGGAAT...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGAGAAACACCCTTGGGTaGCAGAGACAGCATGATATT +
Preference number: 2 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLRNTLG*QRQHDI
Trigger: AATATCATGCTGTCTCTGTCACCCAAGGGTGTTTCT...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR TCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACCAGAACTCTCCAATGTaGGTAGGTAAGTACAGGGGG +
Preference number: 2 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDQNSPM*VGKYRG
Trigger: CCCCCTGTACTTACCTACTCACATTGGAGAGTTCTG...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACAGGGAACTCGTTTATaGTGGACCTTCAAATCAGTG +
Preference number: 2 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPQGTRL*WTFKSV
Trigger: CACTGATTTGAAGGTCCAGCATAAACGAGTTCCCTG...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR CCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTAAAACTGCTACAAAATaGTACTGTCAACAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAKTATK*YCQQAG
Trigger: TCCAGCCTGTTGACAGTACCATTTTGTAGCAGTTTT...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGCACCACGAATGTTATaGGTTTTCTCGGTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSAPRML*VFSVSL
Trigger: TAGAGAAACCGAGAAAACCCATAACATTCGTGGTGC...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAATATTCTAGGCAGTGCTaGCCAGCCCAGACTCCACAA +
Preference number: 2 (lower is better)
Translates to: PISSKKNLPTCTRGICYEYSRQC*PAQTPQ
Trigger: TTGTGGAGTCTGGGCTGGGCAGCACTGCCTAGAATA...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATGTCCCCAGACTCTGCTaGTCCTTCCCAGCATTACTA +
Preference number: 2 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNVPRLC*SFPALL
Trigger: TAGTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGAC...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR GCA 90 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTTACGTATGTAGGTTGGGAACCCCTTGTATaGGAAGCTCCTCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: RRFLVNCNKPENLVTYVGWEPLV*EAPPSE
Trigger: CTCTGAAGGAGGAGCTTCGCATACAAGGGGTTCCCA...ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CAA 90 bp TCGGATTTCCCACAGGCTTTTCCATCTTTTCCACTCCTTGCAGTTTaGTTATTCCTGTCACAACTTAGAAGTTCGAGTGCTCACATGGTA +
Preference number: 2 (lower is better)
Translates to: SDFPQAFPSFPLLAV*LFLSQLRSSSAHMV
Trigger: TACCATGTGAGCACTCGAACTTCTAAGTTGTGACAGGAATAACAAAACTGCAAGGAGTGGAAAAGATGGAAAAGCCTGTGGGAAATCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 90 bp CAACTGTGCAGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTaGGTTACGTATGTAGGTGCAAAGCTGGTTCATCAGATCCCTGTT +
Preference number: 2 (lower is better)
Translates to: QLCRRFLVNCNKPEN*VTYVGAKLVHQIPV
Trigger: AACAGGGATCTGATGAACCAGCTTTGCACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCTGCACAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR CCA 90 bp AGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 2 (lower is better)
Translates to: RGDALRDNSFITDASTTNSCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...ATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp TCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTAATTATTTCTTTCCCAGCATaGAGCTATACCATCTTAATC +
Preference number: 2 (lower is better)
Translates to: SSRTPAPRMLWVFSVSLIISFPA*SYTILI
Trigger: GATTAAGATGGTATAGCTGCATGCTGGGAAAGAAAT...AATTAGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR CCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAATTACCTATAGCAGCATaGTACTGTGACATCATCATA +
Preference number: 2 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQLPIAA*YCDIII
Trigger: TATGATGATGTCACAGTACCATGCTGCTATAGGTAA...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAAAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 2 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQSCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR GCA 90 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTTACGTATGTAGGTATTTCTTTCCCAGCATaGAGCTATACCATCTTAATC +
Preference number: 2 (lower is better)
Translates to: RRFLVNCNKPENLVTYVGISFPA*SYTILI
Trigger: GATTAAGATGGTATAGCTGCATGCTGGGAAAGAAAT...ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR CCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 2 (lower is better)
Translates to: LSWMILLTNSNSPPSAMISCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
3UTR CAA 90 bp TGCCACTTAAACAATTATCCTAAAATTATACCAAGGAAACTAGGTTaGGGCCCAGCAAATGACTCAAATGTAATATTCACTCGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: CHLNNYPKIIPRKLG*GPANDSNVIFTRGK
Trigger: CTTACCTCGAGTGAATATTACATTTGAGTCATTTGCTGGGCCCAAACCTAGTTTCCTTGGTATAATTTTAGGATAATTGTTTAAGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp CTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTaGCGAACTGCTCAGAAGCCTCTTGGTCCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: LLGDVSPFQPLG*RTAQKPLGPGL
Trigger: GAGCCCAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CCA 72 bp GGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTaGGCTGCCGAACTGCTCAGAAGCCTCTTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: GHSWETFPPFSH*AAELLRSLLVL
Trigger: CAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR TCA 72 bp AACAACCCTTCTGACCTTGCAGAGGCAGTCCAGAGCTaGGGGGCCAGCTTGAGCCAGCTTGCAATCCCTCGG +
Preference number: 3 (lower is better)
Translates to: NNPSDLAEAVQS*GASLSQLAIPR
Trigger: CCGAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGCTCTGGACTGCCTCTGCAAGGTCAGAAGGGTTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
3UTR GCA 72 bp AGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTaGTCAGAAGCCTCTTGGTCCTGGGCTCCGTTGCTA +
Preference number: 3 (lower is better)
Translates to: RRFPLSATGLPN*SEASWSWAPLL
Trigger: TAGCAACGGAGCCCAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR CCA 72 bp AGGCGCTTTGATAAAAGGGCCAAGGGTGCCCTCGTGTaGCCACGGAGGGAAATGCCGCGGCTTCAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: RRFDKRAKGALV*PRREMPRLQQK
Trigger: TTTCTGCTGAAGCCGCGGCATTTCCCTCCGTGGCCACACGAGGGCACCCTTGGCCCTTTTATCAAAGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp TGCCTTCCGCCGTCTCCGAGCGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCACGGACGCCAGCACCA +
Preference number: 3 (lower is better)
Translates to: CLPPSPSAEVML*GIIPSSRTPAP
Trigger: TGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGCGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR-3UTR CAA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGCTGGTAGGATTCCTCTaGCCACCCCACAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRLVGFL*PPHRPL
Trigger: GAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAG...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp GTGGGATTGATGCAAGGTAGGCCCCATCTTGAAGAGTaGCCTAGAACAGGGTACCAGGGCCTCCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: VGLMQGRPHLEE*PRTGYQGLQLE
Trigger: CTCCAGCTGGAGGCCCTGGTACCCTGTTCTAGGTCACTCTTCAAGATGGGGCCTACCTTGCATCAATCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp ACCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTaGAGGCGCTTTGATAAAAGGGCCAAGGGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: TVDRLVSIPTGK*RRFDKRAKGAL
Trigger: GAGGGCACCCTTGGCCCTTTTATCAAAGCGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp CAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTaGCGAGGGCCTGATCTAGCTGCTGCCAAGACATGC +
Preference number: 3 (lower is better)
Translates to: QVKAQQFRFLCL*RGPDLAAAKTC
Trigger: GCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGCTAAGGCCCATCTCATaGTCCGACCTTGACAGAATT +
Preference number: 3 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGLRPIS*SDLDRI
Trigger: AATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAG...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR CCA 72 bp AAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTaGTCCCCAGACTCTGCTGCTCCTTCCCAGCATTAC +
Preference number: 3 (lower is better)
Translates to: KQPGVRNVPFTG*SPDSAAPSQHY
Trigger: GTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 72 bp TATCAAACACTTAAACAGGTACTGTCCGGCCACTCCTaGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: YQTLKQVLSGHS*ETFPPFSHWAA
Trigger: GGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAGTACCTGTTTAAGTGTTTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR TCA 72 bp AGAGAGAGCCACCCCTCCTCAAGAAACACCCTTGGGTaGCAGAGACAGCATGATATTCTAGGCAGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RESHPSSRNTLG*QRQHDILGSAA
Trigger: GGCAGCACTGCCTAGAATATCATGCTGTCTCTGTCACCCAAGGGTGTTTCTTGAGGAGGGGTGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp TCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTaGTGCAAGGTAGGCCCCATCTTGAAGAGTGACCTA +
Preference number: 3 (lower is better)
Translates to: SPPPTIQLPLWD*CKVGPILKSDL
Trigger: TAGGTCACTCTTCAAGATGGGGCCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp GAATGTGCCATTTACCGGGTGGTCCCCAGACTCTGCTaGTCCTTCCCAGCATTACTAAGGTTTCTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: ECAIYRVVPRLC*SFPALLRFLSQ
Trigger: CTGGGAGAGAAACCTTAGTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 72 bp CTTCCCGTCCTGACCAACAGCCACCTCTCAGAAGGCTaGCTTAACTACTCAGCCCCAGTCTTCTTAGCAGAT +
Preference number: 3 (lower is better)
Translates to: LPVLTNSHLSEG*LNYSAPVFLAD
Trigger: ATCTGCTAAGAAGACTGGGGCTGAGTAGTTAAGCCAGCCTTCTGAGAGGTGGCTGTTGGTCAGGACGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp TGGTTCATCAGATCCCTGTTCTGGCCCTCAACCCAGTaGATCTCCACTAAGGCATCGTCCACCTCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: WFIRSLFWPSTQ*ISTKASSTSFL
Trigger: TAAGAAGGAGGTGGACGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCAGAACAGGGATCTGATGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR GCA 72 bp GGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTaGCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: GNCEKQQMLFCH*PENHSVWPAQR
Trigger: CCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CCA 72 bp CTGGGAATCTCCAGGCAACAAGAAGCCAACCACACCTaGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: LGISRQQEANHT*EGTVRSNRCCS
Trigger: AGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGATTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CAA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCACTGAGGGCTTTCTGTaGTTACTGATGACCACAATT +
Preference number: 3 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGTEGFL*LLMTTI
Trigger: AATTGTGGTCATCAGTAACAACAGAAAGCCCTCAGT...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCAAGGTAGGCCCCATCTaGAAGAGTGACCTAGAACAG +
Preference number: 3 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPKVGPI*KSDLEQ
Trigger: CTGTTCTAGGTCACTCTTCAAGATGGGGCCTACCTT...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCAGCTCCCTTTGTGGGATaGATGCAAGGTAGGCCCCAT +
Preference number: 3 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPAPFVG*MQGRPH
Trigger: ATGGGGCCTACCTTGCATCAATCCCACAAAGGGAGC...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp CTCAGAAGCCTCTTGGTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAATCAGTGTACGTTACTTaGGGAACCCCTTGTATGCGA +
Preference number: 3 (lower is better)
Translates to: LRSLLVLGSVARALTTFQSVYVT*GTPCMR
Trigger: TCGCATACAAGGGGTTCCCAAAGTAACGTACACTGA...TTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGACCAAGAGGCTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR GCA 72 bp AATAAGCAACATCAAAACAGCCAGGTGTCAGGAATGTaGCATTTACCGGGTGGTCCCCAGACTCTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: NKQHQNSQVSGM*HLPGGPQTLLL
Trigger: GAGCAGCAGAGTCTGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp CAGCTTGAGCCAGCTTGCAATCCCTCGGGAGTTTACTaGGGGCTTTCTGTTGTTACTGATGACCACAATTCC +
Preference number: 3 (lower is better)
Translates to: QLEPACNPSGVY*GLSVVTDDHNS
Trigger: GGAATTGTGGTCATCAGTAACAACAGAAAGCCCTCAGTAAACTCCCGAGGGATTGCAAGCTGGCTCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
3UTR GCA 72 bp AACCACACCTGGGAGGGAACTGTGAGAAGCAACAGATaGTGTTCTGTCACTGCCCGGAAAATCATTCAGTCT +
Preference number: 3 (lower is better)
Translates to: NHTWEGTVRSNR*CSVTARKIIQS
Trigger: AGACTGAATGATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CCA 72 bp CTTTTAGAAGTAACTCTAGGAGGTACATGGACTCTCTaGAGGTCCACGGACCAGGTTAAGAACACTGGTCAG +
Preference number: 3 (lower is better)
Translates to: LLEVTLGGTWTL*RSTDQVKNTGQ
Trigger: CTGACCAGTGTTCTTAACCTGGTCCGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGTTACTTCTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 72 bp CTCACAGAGCTTTTAGAAGTAACTCTAGGAGGTACATaGACTCTCTGGAGGTCCACGGACCAGGTTAAGAAC +
Preference number: 3 (lower is better)
Translates to: LTELLEVTLGGT*TLWRSTDQVKN
Trigger: GTTCTTAACCTGGTCCGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGTTACTTCTAAAAGCTCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CCA 72 bp ATGCTGTTCTGTCACTGCCCGGAAAATCATTCAGTCTaGCCAGCTCAGAGGTGGTTTTCCTTTACCTATAGC +
Preference number: 3 (lower is better)
Translates to: MLFCHCPENHSV*PAQRWFSFTYS
Trigger: GCTATAGGTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGACAGAACAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR-3UTR CAA 90 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTTACGTATGTAGGTCTGGTAGGATTCCTCTaGCCACCCCACAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: RRFLVNCNKPENLVTYVGLVGFL*PPHRPL
Trigger: GAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAG...ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR TCA 72 bp TATACTAAAGTAATCTACACGAAGCTTAGGATGAGTTaGAAGGGTACTGCCAAAACGCGGCCCTGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: YTKVIYTKLRMS*KGTAKTRPCPG
Trigger: TCCTGGGCAGGGCCGCGTTTTGGCAGTACCCTTTCAACTCATCCTAAGCTTCGTGTAGATTACTTTAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp AAACTCCAAGCTAAGGCCCATCTCATTGTCCGACCTTaGCAGAATTCAGTGTACGTTACTTTGGGAACCCCT +
Preference number: 3 (lower is better)
Translates to: KLQAKAHLIVRP*QNSVYVTLGTP
Trigger: AGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR GCA 72 bp GTGCCTTCTGTGTGCCTCAGTCACACCGGGGAGTTTTaGTTACCTAATTCTGCTTCTGAAATAAGCAACATC +
Preference number: 3 (lower is better)
Translates to: VPSVCLSHTGEF*LPNSASEISNI
Trigger: GATGTTGCTTATTTCAGAAGCAGAATTAGGTAAGCAAAACTCCCCGGTGTGACTGAGGCACACAGAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp ACAAACAATCAATCAAAAAGCCACTGGTCAGTATGCTaGCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAG +
Preference number: 3 (lower is better)
Translates to: TNNQSKSHWSVC*LLQLQLHSQVK
Trigger: CTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACCAGTGGCTTTTTGATTGATTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp ACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACAACACACAATTATAAAGACAACCCTTCTGACCTaGCAGAGGCAGTCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: TCPPVPEVYAMKQHTIIKTTLLT*QRQSRA
Trigger: AGCTCTGGACTGCCTCTGCAAGGTCAGAAGGGTTGT...CTTTATAATTGTGTGTTGTTTCATAGCATATACCTCTGGTACAGGTGGGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp CTAGGCGGAGGTCTTCGAGGATTTCGTGAGTTTACTCCCTTTTATGAGATCAGATATCATCCACTTCTGTaGCGAGGAAATACCAGCCAT +
Preference number: 3 (lower is better)
Translates to: LGGGLRGFREFTPFYEIRYHPLL*RGNTSH
Trigger: ATGGCTGGTATTTCCTCGCAACAGAAGTGGATGATA...TCTGATCTCATAAAAGGGAGTAAACTCACGAAATCCTCGAAGACCTCCGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571298.5
3UTR TCA 72 bp AAAATTTCTAGACCAGGGGAATCCACGGTCCTGAATTaGGTCTTGGCTCTGTGTGACCCTGGGTATTGTTTT +
Preference number: 3 (lower is better)
Translates to: KISRPGESTVLN*VLALCDPGYCF
Trigger: AAAACAATACCCAGGGTCACACAGAGCCAAGACTCAATTCAGGACCGTGGATTCCCCTGGTCTAGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp TCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTAATTACTGAGGGCTTTCTGTaGTTACTGATGACCACAATT +
Preference number: 3 (lower is better)
Translates to: SSRTPAPRMLWVFSVSLITEGFL*LLMTTI
Trigger: AATTGTGGTCATCAGTAACAACAGAAAGCCCTCAGT...AATTAGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR-3UTR CAA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACATCCTTAGTGGGTTATaGACCCCTTTGTCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDILSGL*TPLSVS
Trigger: AGACACAGACAAAGGGGTCAATAACCCACTAAGGAT...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR-3UTR CAA 90 bp ACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACAACACACAATTATAAAGGGGTTATTGACCCCTTaGTCTGTGTCTGAGGGTTCT +
Preference number: 3 (lower is better)
Translates to: TCPPVPEVYAMKQHTIIKGLLTP*SVSEGS
Trigger: AGAACCCTCAGACACAGACAAAGGGGTCAATAACCC...CTTTATAATTGTGTGTTGTTTCATAGCATATACCTCTGGTACAGGTGGGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp AACAAAGGACCAGAATACAAAACTGAATACGCAGCATaGGGACAACCAAAGTTAAACCCACACACTCACACA +
Preference number: 3 (lower is better)
Translates to: NKGPEYKTEYAA*GQPKLNPHTHT
Trigger: TGTGTGAGTGTGTGGGTTTAACTTTGGTTGTCCTCATGCTGCGTATTCAGTTTTGTATTCTGGTCCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR GCA 72 bp ACACGTTTCCAACTGTGCAGGAGGTTTCTAGTTAACTaGAACAAGCCTGAAAATTTGGTTACGTATGTAGGT +
Preference number: 3 (lower is better)
Translates to: TRFQLCRRFLVN*NKPENLVTYVG
Trigger: ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCTGCACAGTTGGAAACGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
3UTR TCA 72 bp AAGGTCATTAGCTTGACATCTATAAAATCTCCTCCATaGCATGAAGCCTTAAACCTAGGGACAGAAACACAC +
Preference number: 3 (lower is better)
Translates to: KVISLTSIKSPP*HEALNLGTETH
Trigger: GTGTGTTTCTGTCCCTAGGTTTAAGGCTTCATGTCATGGAGGAGATTTTATAGATGTCAAGCTAATGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR TCA 72 bp AAGATGTTAAATGAACAAAGGACCAGAATACAAAACTaGATACGCAGCATGAGGACAACCAAAGTTAAACCC +
Preference number: 3 (lower is better)
Translates to: KMLNEQRTRIQN*IRSMRTTKVKP
Trigger: GGGTTTAACTTTGGTTGTCCTCATGCTGCGTATTCAGTTTTGTATTCTGGTCCTTTGTTCATTTAACATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCAAGGGTGCCCTCGTGTaGCCACGGAGGGAAATGCCG +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGKGALV*PRREMP
Trigger: CGGCATTTCCCTCCGTGGCCACACGAGGGCACCCTT...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCTCTCTGCCGAGGGCCTaGTCTAGCTGCTGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGSLPRA*SSCCQD
Trigger: GTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGA...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGACTGGGCTGCCGAACTaGTCAGAAGCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGTGLPN*SEASWS
Trigger: GGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGT...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCTGGGACAGGGACTCCTaGCTCGGGCACGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPWDRDS*LGHGPS
Trigger: GGAGGGCCCGTGCCCGAGCCAGGAGTCCCTGTCCCA...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTACCAGGGCCTCCAGCTaGAGGCAGAGAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSTRASS*RQREPP
Trigger: GGGTGGCTCTCTCTGCCTCCAGCTGGAGGCCCTGGT...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTGCTGAGGGGCCAGCTTaGGCCAGCTTGCAATCCCTC +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSAEGPA*ASLQSL
Trigger: GAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGC...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTGCTCAGAAGCCTCTTGGTCCTTTCAGCCACTGGGCTaGCGAACTGCTCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFPLSATGLPNCSEASWSFQPLG*RTAQKP
Trigger: AGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAA...GGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTGCTGCTGCCAAGACATaGCAAGGTCACCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WAAGRIPLATPQATPKQVAAAKT*QGHQLP
Trigger: GGGAAGCTGGTGACCTTGGCATGTCTTGGCAGCAGC...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTCGCTTCCTGTGTCTCTaGCGAGGGCCTGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: WAAGRIPLATPQATPKQVRFLCL*RGPDLA
Trigger: AGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGTGGGACAGGGACTCCTaGCTCGGGCACGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSWDRDS*LGHGPS
Trigger: GGAGGGCCCGTGCCCGAGCCAGGAGTCCCTGTCCCA...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCCCCTTTGTCTGTGTCTaGGGGTTCTGGGAACCCTCT +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGPFVCV*GFWEPS
Trigger: AGAGGGTTCCCAGAACCCTCAGACACAGACAAAGGG...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTTCAGAGGCGCCAGGCTaGATTTCTTTCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: WAAGRIPLATPQATPKQVSEAPG*ISFPAC
Trigger: GCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGA...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR GCA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAACACTGGTCAGTATGCTaGCTTCTCCAGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQHWSVC*LLQLQL
Trigger: GAGCTGGAGCTGGAGAAGGCAGCATACTGACCAGTG...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCAGCCAAAACGCGGCCCTaGCCAGGACACACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPAKTRP*PGHTAE
Trigger: CTCTGCTGTGTGTCCTGGGCAGGGCCGCGTTTTGGC...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAAACGTCGTGTCTGGCGTaGGCCTGTACAACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQTSCLA*ACTTLE
Trigger: TTCTAGGGTTGTACAGGCCCACGCCAGACACGACGT...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCAGCCTCCCGAGTAGCTaGGATTACAGGCACGTGCTA +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGSLPSS*DYRHVL
Trigger: TAGCACGTGCCTGTAATCCCAGCTACTCGGGAGGCT...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCAAGAAAACACCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGCACACAGCAGAGGTCTaGAGTGGGGACAGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SRKHRGQTCLHSHGEVKAHTAEV*SGDSAA
Trigger: GGCCGCACTGTCCCCACTCCAGACCTCTGCTGTGTG...CGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 72 bp GACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGCTTaGATAAAAGGGCCAAGGGTGCCCTCGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DLSPFPRGSEGA*IKGPRVPSCGH
Trigger: GTGGCCACACGAGGGCACCCTTGGCCCTTTTATCAAAGCGCCTTCACTTCCCCGTGGGAATGGAGACAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 72 bp ATGCCTTCCGCCGTCTCCGAGCGCAGAGGTGATGCTTaGAGGGATAATTCCTTCATCACGGACGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: MPSAVSERRGDA*RDNSFITDAST
Trigger: GGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGCGGAAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCAGAACCCTAGGCTGCTaGTGCAACATCAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGRTLGC*CNIKHS
Trigger: GCTGTGCTTGATGTTGCATCAGCAGCCTAGGGTTCT...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCTCAGAGGCGCCAGGCTaGATTTCTTTCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: VLGSVARALTTFQNLHPSSEAPG*ISFPAC
Trigger: GCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGA...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCTATTCTAGGCAGTGCTaGCCAGCCCAGACTCCACAA +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGYSRQC*PAQTPQ
Trigger: TTGTGGAGTCTGGGCTGGGCAGCACTGCCTAGAATA...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCAAGAAAACACCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGGGCCACGGAGGGAAATaGCGCGGCTTCAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SRKHRGQTCLHSHGEVKAGHGGK*RGFSRK
Trigger: CTTTCTGCTGAAGCCGCGGCATTTCCCTCCGTGGCC...CGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCGCCAGACGTCGTGTCTaGCGTGGGCCTGTACAACCC +
Preference number: 4 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPARRRV*RGPVQP
Trigger: GGGTTGTACAGGCCCACGCCAGACACGACGTCTGGC...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCGCCAGACGTCGTGTCTaGCGTGGGCCTGTACAACCC +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKIARRRV*RGPVQP
Trigger: GGGTTGTACAGGCCCACGCCAGACACGACGTCTGGC...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTATCAGATCCCTGTTCTaGCCCTCAACCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: WAAGRIPLATPQATPKQVIRSLF*PSTQCI
Trigger: GATGCACTGGGTTGAGGGCCAGAACAGGGATCTGAT...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTGTGAGCCACTGCGCCTaGCCACGGTCACGGATTTTT +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSVSHCA*PRSRIF
Trigger: AAAAATCCGTGACCGTGGCCAGGCGCAGTGGCTCAC...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCCTCCAGACTGAAAGCTaGCCTGCTCATGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGLQTES*PAHGFL
Trigger: AAGGAACCCATGAGCAGGCCAGCTTTCAGTCTGGAG...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCGAAGCCAACCACACCTaGGAGGGAACTGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLGSVARALTTFQNLHPSEANHT*EGTVRS
Trigger: GCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTC...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR TCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGTTGTCAGAATCCTGGTaGCCGATCAGATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGLSESW*PIRSST
Trigger: GGTAGAAGATCTGATCGGTCACCAGGATTCTGACAA...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTCTTCCAAGGCCTGAATaGCGTCCTCAGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRLPRPE*RPQELG
Trigger: CCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAG...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR TCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCCTTCCAAGGCCTGAATaGCGTCCTCAGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKILPRPE*RPQELG
Trigger: CCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAG...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR TCA 90 bp TCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCATCTTCTTCCAAGGCCTGAATaGCGTCCTCAGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SFRGARLHFFPSMQLYHLLPRPE*RPQELG
Trigger: CCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAG...AAGATGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTCACTCGGCTCCAGACTaGAAGCTGGCCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRHSAPD*KLACSW
Trigger: CCATGAGCAGGCCAGCTTTCAGTCTGGAGCCGAGTG...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCAAGAAAACACCGTGGACAGACTTGTCTCCATTCCCACGGGGAAGTGAAGGCGGGGAAGGAAGCAGGCTaGCGGAGGCAAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: SRKHRGQTCLHSHGEVKAGKEAG*RRQSRF
Trigger: GAATCTGCTTTGCCTCCGTCAGCCTGCTTCCTTCCC...CGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCATTCCCACGGGGAAGTaGAGGCGCTTTGATAAAAGG +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGIPTGK*RRFDKR
Trigger: CCTTTTATCAAAGCGCCTTCACTTCCCCGTGGGAAT...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTTCTTCGAGGATTTCGTaGGTTTACTCCCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: VRPLLGDVSPFQPLGCRTSSRIS*VYSLCQ
Trigger: TTGACATAGGGAGTAAACTCACGAAATCCTCGAAGA...AGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp GCCGTCTCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACCTGCTGGGCAGTGTGTaGAGACACTTCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AVSERRGDALRDNSFITDLLGSV*RHFSWE
Trigger: TTCCCAGCTGAAGTGTCTGCACACACTGCCCAGCAG...GTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp AAAAACTCCAAGCTAAGGCCCATCTCATTGTCCGACCTTGACAGAATTCAGTGTTGGGACAGGGACTCCTaGCTCGGGCACGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KNSKLRPISLSDLDRIQCWDRDS*LGHGPS
Trigger: GGAGGGCCCGTGCCCGAGCCAGGAGTCCCTGTCCCA...ACACTGAATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTCCCCCTTTCAGCCACTaGGCTGCCGAACTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAPPFSH*AAELLR
Trigger: TCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGG...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTCTGTCCGGCCACTCCTaGGAGACGTTTCCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VVKSSAPFFQKASDFPQALSGHS*ETFPPF
Trigger: GAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAG...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTAGCAGAGGTCTGGAGTaGGGACAGTGCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VVKSSAPFFQKASDFPQASRGLE*GQCGQH
Trigger: ATGCTGGCCGCACTGTCCCCACTCCAGACCTCTGCT...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCTTGTCAGAATCCTGGTaGCCGATCAGATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGLSESW*PIRSST
Trigger: GGTAGAAGATCTGATCGGTCACCAGGATTCTGACAA...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCTTTCAATCCATGTCGTaGCAACGACTATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGFQSMS*QRLCLP
Trigger: CGGAAGGCATAGTCGTTGTCACGACATGGATTGAAA...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCATTCCTCCTTGTAAATaGCCACACTACGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: STAKLRHSSSASCVSAEGIPPCK*PHYDSL
Trigger: CAGGGAGTCGTAGTGTGGTCATTTACAAGGAGGAAT...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTCACAAACAACCCTTCTaGCCTTGCAGAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSHKQPF*PCRGSP
Trigger: TGGACTGCCTCTGCAAGGTCAGAAGGGTTGTTTGTG...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCGGCAGGAGAATCGCTTaGACCCGGGAGGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGGRRIA*TREAGV
Trigger: AACCCCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCTCGCTTACTTGGTGGTaGCTGCTGGGCAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKISLTWW*LLGSVC
Trigger: GCACACACTGCCCAGCAGTCACCACCAAGTAAGCGA...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTCCAGTTCTTGGCTATTaGCAGACTCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSPVLGY*QTLWGW
Trigger: CCACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGG...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGCCAGTTCTTGGCTATTaGCAGACTCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSPVLGY*QTLWGW
Trigger: CCACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGG...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCATGGCCCTCAACCCAGTaGATCTCCACTAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPWPSTQ*ISTKAS
Trigger: CGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCA...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTGAAGCCTCTTGGTCCTaGGCTCCGTTGCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTREASWS*APLLEP
Trigger: AGGCTCTAGCAACGGAGCCCAGGACCAAGAGGCTTC...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp AGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATCCCCCTTTCAGCCACTaGGCTGCCGAACTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RGDALRDNSFITDASTTNPPFSH*AAELLR
Trigger: TCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAGGGGG...ATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTTCAACAGGCTGGAGGTaGGGGTATGGGTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVKSSAPFFQKASDFPQASTGWR*GYGCLL
Trigger: CAGAAGGCACCCATACCCCCACCTCCAGCCTGTTGA...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGGTGGTGATGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGVVMVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCATCACCAC...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGAEVML*GIIPSS
Trigger: TGATGAAGGAATTATCCCTCAAAGCATCACCTCTGC...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGTTCTCTTCCAAGGCCTaGATGACGTCCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRFSSKA*MTSSGA
Trigger: AGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAA...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCCCGTTGCTAGAGCCTTaGCAACTTTCCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: SERRGDALRDNSFITDASPLLEP*QLSKTS
Trigger: GGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGG...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAAGCTGAGGGGCCAGCTTaGGCCAGCTTGCAATCCCTC +
Preference number: 4 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQAEGPA*ASLQSL
Trigger: GAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGC...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTCTCCCTTTGTGGGATTaGTGCAAGGTAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRLPLWD*CKVGPI
Trigger: GATGGGGCCTACCTTGCATCAATCCCACAAAGGGAG...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCATCCACGGTCCTGAATTaGGTCTTGGCTCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPSTVLN*VLALCD
Trigger: GTCACACAGAGCCAAGACTCAATTCAGGACCGTGGA...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGGGGAATCCACGGTCCTaGATTGAGTCTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRGNPRS*IESWLC
Trigger: ACAGAGCCAAGACTCAATTCAGGACCGTGGATTCCC...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCATCTCCTCCATGACATaGAGCCTTAAACCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSISSMT*SLKPRD
Trigger: GTCCCTAGGTTTAAGGCTTCATGTCATGGAGGAGAT...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCCGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGRQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACG...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCACGTCGTGTCTGGCGTaGGCCTGTACAACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKITSCLA*ACTTLE
Trigger: TTCTAGGGTTGTACAGGCCCACGCCAGACACGACGT...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp TTCATCAGATCCCTGTTCTGGCCCTCAACCCAGTGCATCTCCACTAAGGCATCGCCCCTGGCCAGTTCTTaGCTATTGCCAGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: FIRSLFWPSTQCISTKASPLASS*LLPDSL
Trigger: CAAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGG...CGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCAGAACAGGGATCTGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCATGCTCAGAAGCCTCTTaGTCCTGGGCTCCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPCSEAS*SWAPLL
Trigger: TAGCAACGGAGCCCAGGACCAAGAGGCTTCTGAGCA...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp CCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGCTGTCCGGCCACTCCTaGGAGACGTTTCCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PTLTEFSVRYFGNPLYAKLSGHS*ETFPPF
Trigger: GAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAG...CTTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAGACAGTGGGGTGGTGTaGGCTGGCACAGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPDSGVV*AGTAEN
Trigger: ATTTTCTGCTGTGCCAGCCCACACCACCCCACTGTC...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCACACAGAGCATTCTCTaGAAATCCCTACGACACAGG +
Preference number: 4 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSTQSIL*KSLRHR
Trigger: CCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGT...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCCTTGGTGGTGACTGCTaGGCAGTGTGTGCAGACACT +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKILGGDC*AVCADT
Trigger: AGTGTCTGCACACACTGCCCAGCAGTCACCACCAAG...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR TCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCTTTCAATCCATGTCGTaGCAACGACTATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SERRGDALRDNSFITDASFQSMS*QRLCLP
Trigger: CGGAAGGCATAGTCGTTGTCACGACATGGATTGAAA...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGATTCCTCCTTGTAAATaGCCACACTACGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSIPPCK*PHYDSL
Trigger: CAGGGAGTCGTAGTGTGGTCATTTACAAGGAGGAAT...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCAGTGACAGAGACAGCATaGTATTCTAGGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPVTETA*YSRQCC
Trigger: GCAGCACTGCCTAGAATATCATGCTGTCTCTGTCAC...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCCCCCATCTTGAAGAGTaGCCTAGAACAGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPPHLEE*PRTGYQ
Trigger: CTGGTACCCTGTTCTAGGTCACTCTTCAAGATGGGG...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGCAGAACTCTCCAATGTaGGTAGGTAAGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRQNSPM*VGKYRG
Trigger: CCCCCTGTACTTACCTACTCACATTGGAGAGTTCTG...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAGGGGTAGATGCAAGATaGCCCCGTGCCTATGTCAAT +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPGVDAR*PRAYVN
Trigger: ATTGACATAGGCACGGGGGCATCTTGCATCTACCCC...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCATCTTTATTCTAGGCAGTGCTaGCCAGCCCAGACTCCACAA +
Preference number: 4 (lower is better)
Translates to: SFRGARLHFFPSMQLYHLYSRQC*PAQTPQ
Trigger: TTGTGGAGTCTGGGCTGGGCAGCACTGCCTAGAATA...AAGATGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAGTCCCCAGACTCTGCTaGTCCTTCCCAGCATTACTA +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPVPRLC*SFPALL
Trigger: TAGTAATGCTGGGAAGGAGCAGCAGAGTCTGGGGAC...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGGAGTTGAAAGGGTACTaGCAAAACGCGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLELKGY*QNAALP
Trigger: GGGCAGGGCCGCGTTTTGGCAGTACCCTTTCAACTC...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCGTGAGAAGCAACAGATaGTGTTCTGTCACTGCCCGG +
Preference number: 4 (lower is better)
Translates to: WEGTVRSNRCCSVTARKIVRSNR*CSVTAR
Trigger: CCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCAC...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTACGTCGTGTCTGGCGTaGGCCTGTACAACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: SFITDASTTNVMGFLGFSTSCLA*ACTTLE
Trigger: TTCTAGGGTTGTACAGGCCCACGCCAGACACGACGT...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCTCTCCTGGGGGCCCCTaGCCAGTTCTTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGSPGGP*PVLGYC
Trigger: GCAATAGCCAAGAACTGGCCAGGGGCCCCCAGGAGA...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCAGAAGCCTCTTGGTCCTaGGCTCCGTTGCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPEASWS*APLLEP
Trigger: AGGCTCTAGCAACGGAGCCCAGGACCAAGAGGCTTC...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTCACCTCTCAGAAGGCTaGCTTAACTACTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRHLSEG*LNYSAP
Trigger: TGGGGCTGAGTAGTTAAGCCAGCCTTCTGAGAGGTG...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTACTCTAGGAGGTACATaGACTCTCTGGAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRTLGGT*TLWRST
Trigger: CGTGGACCTCCAGAGAGTCCATGTACCTCCTAGAGT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp CTCCTCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCATGGCCAGCTCAGAGGTaGTTTTCCTTTACCTATAGC +
Preference number: 4 (lower is better)
Translates to: LLLQRRQAAFLSQHAAIPWPAQR*FSFTYS
Trigger: GCTATAGGTAAAGGAAAACCACCTCTGAGCTGGCCA...TGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR TCA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGCCCAGTGAATATAGTTaGGTCTCAAGGGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRPSEYS*VSRELW
Trigger: CCACAGTTCCCTTGAGACTCAACTATATTCACTGGG...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCCTCATTGTCCGACCTTaGCAGAATTCAGTGTACGTT +
Preference number: 4 (lower is better)
Translates to: SERRGDALRDNSFITDASLIVRP*QNSVYV
Trigger: AACGTACACTGAATTCTGTCAAGGTCGGACAATGAG...GCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGTTCTCTTCCAAGGCCTaGATGACGTCCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSFSSKA*MTSSGA
Trigger: AGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAA...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCCACAAACAACCCTTCTaGCCTTGCAGAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FLHHGRQHHECYGFSRFLHKQPF*PCRGSP
Trigger: TGGACTGCCTCTGCAAGGTCAGAAGGGTTGTTTGTG...GAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGTCCAGGAGCTGGTCGTaGAGTCATCAGCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLSRSWS*SHQLPS
Trigger: AGAAGGGAGCTGATGACTTCACGACCAGCTCCTGGA...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCTTTGGATGCCAGATATaGAAAGTCAGGAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSFGCQI*KVRRFV
Trigger: GACAAACCTCCTGACTTTGCATATCTGGCATCCAAA...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGGGGTAGATGCAAGATaGCCCCGTGCCTATGTCAAT +
Preference number: 4 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSGVDAR*PRAYVN
Trigger: ATTGACATAGGCACGGGGGCATCTTGCATCTACCCC...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp CCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGTCAGAGGCGCCAGGCTaGATTTCTTTCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PTLTEFSVRYFGNPLYAKSEAPG*ISFPAC
Trigger: GCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGA...CTTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCGGTTACGTATGTAGGTaGAAAGCTGGTTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSGYVCR*KAGSSD
Trigger: ATCTGATGAACCAGCTTTGCACCTACATACGTAACC...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCCAGAAACACCTTCTGTaGTTCAATACACAGAGCATT +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGQKHLL*FNTQSI
Trigger: AATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCTG...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CTAGGCGGAGGTCTTCGAGGATTTCGTGAGTTTACTCCCTTTTATGAGATCAGACCAGGAAGCGGGGGTTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: LGGGLRGFREFTPFYEIRPGSGG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACCCCCGCTTCCTGG...TCTGATCTCATAAAAGGGAGTAAACTCACGAAATCCTCGAAGACCTCCGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CCA 90 bp GCCGTCTCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGTCTCAAGGGAACTGTaGGAATTAGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: AVSERRGDALRDNSFITDVSREL*ELVSPM
Trigger: CATTGGAGAGACTAATTCCCACAGTTCCCTTGAGAC...GTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp CTCCTCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCACAGTGTACGTTACTTTaGGAACCCCTTGTATGCGAA +
Preference number: 4 (lower is better)
Translates to: LLLQRRQAAFLSQHAAIPQCTLL*EPLVCE
Trigger: TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTG...TGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp CATTGTCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATTCTCCTGGGGGCCCCTaGCCAGTTCTTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: HCPTLTEFSVRYFGNPLYSPGGP*PVLGYC
Trigger: GCAATAGCCAAGAACTGGCCAGGGGCCCCCAGGAGA...ATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp CTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACCTATCCTTTCATCCTCCGTaGGTTCCGGGTTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPGKSFSLASSEVVFLYLSFHPP*VPGFPP
Trigger: AGGAGGAAAACCCGGAACCCACGGAGGATGAAAGGA...TAGGTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTAGTCTTCTTAGCAGATaGCAAGGAGCTCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRSLLSR*QGALAK
Trigger: CTTGGCCAGAGCTCCTTGCCATCTGCTAAGAAGACT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCATCTTTGCAGACACTTCAGCTaGGAATCTCCAGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: SFRGARLHFFPSMQLYHLCRHFS*ESPGNK
Trigger: CTTGTTGCCTGGAGATTCCCAGCTGAAGTGTCTGCA...AAGATGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CAA 72 bp GCAACTGGGTATTTCAAGAAAACACCGTGGACAGACTaGTCTCCATTCCCACGGGGAAGTGAAGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: ATGYFKKTPWTD*SPFPRGSEGAL
Trigger: CAAAGCGCCTTCACTTCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGAAATACCCAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp CCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGTTCTCTTCCAAGGCCTaGATGACGTCCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTLTEFSVRYFGNPLYAKFSSKA*MTSSGA
Trigger: AGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAA...CTTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp AGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATCCCTCGGGAGTTTACTaGGGGCTTTCTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: RGDALRDNSFITDASTTNPSGVY*GLSVVT
Trigger: AGTAACAACAGAAAGCCCTCAGTAAACTCCCGAGGG...ATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGTATCTATTTCTTGCATaGATTGATTTACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGYLFLA*IDLLRA
Trigger: GGCTCTGAGTAAATCAATGCATGCAAGAAATAGATA...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp ATCTCCAGGCAACAAGAAGCCAACCACACCTGGGAGGGAACTGTGAGAAGCAACCGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: ISRQQEANHTWEGTVRSNRQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACG...GTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCATTTCTTTCCCAGCATaGAGCTATACCATCTTAATC +
Preference number: 4 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGISFPA*SYTILI
Trigger: GATTAAGATGGTATAGCTGCATGCTGGGAAAGAAAT...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCATGGGAACCCCTTGTATaGGAAGCTCCTCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPWEPLV*EAPPSE
Trigger: CTCTGAAGGAGGAGCTTCGCATACAAGGGGTTCCCA...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR GCA 90 bp AGATTCCCCACCACCCACCATACAGCTCCCTTTGTGGGATTGATGCAAGGTAGGCAGGGAACTCGTTTATaGTGGACCTTCAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: RFPTTHHTAPFVGLMQGRQGTRL*WTFKSV
Trigger: CACTGATTTGAAGGTCCAGCATAAACGAGTTCCCTG...CCTACCTTGCATCAATCCCACAAAGGGAGCTGTATGGTGGGTGGTGGGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGCCAGTTCTTGGCTATTaGCAGACTCTTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PTLTEFSVRYFGNPLYAKPVLGY*QTLWGW
Trigger: CCACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGG...CTTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGATCTCAGCCTCACAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLISASQ*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTGTGAGGCTGAGAT...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCCCCCCGTGCCATTTTTaGCCGAGGGTATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSWMILLTNSNSPPSAMIPPCHF*PRVSWP
Trigger: GGGCCAGGATACCCTCGGGCAAAAATGGCACGGGGG...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CCA 90 bp GGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGGAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 4 (lower is better)
Translates to: GGGLFLFQGLNDVLRSSGSCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...CCCCGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGGAACTCGTTTATGCTaGACCTTCAAATCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSGTRLC*TFKSVR
Trigger: TCTCACTGATTTGAAGGTCCAGCATAAACGAGTTCC...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCATCCTTTCATCCTCCGTaGGTTCCGGGTTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPSFHPP*VPGFPP
Trigger: AGGAGGAAAACCCGGAACCCACGGAGGATGAAAGGA...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGATCAGATCCCTGTTCTaGCCCTCAACCCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLIRSLF*PSTQCI
Trigger: GATGCACTGGGTTGAGGGCCAGAACAGGGATCTGAT...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp ATCTCCAGGCAACAAGAAGCCAACCACACCTGGGAGGGAACTGTGAGAAGCAACGAAAATCATTCAGTCTaGCCAGCTCAGAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ISRQQEANHTWEGTVRSNENHSV*PAQRWF
Trigger: AAACCACCTCTGAGCTGGCCAGACTGAATGATTTTC...GTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR TCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTCTCATTGTCCGACCTTaGCAGAATTCAGTGTACGTT +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRLIVRP*QNSVYV
Trigger: AACGTACACTGAATTCTGTCAAGGTCGGACAATGAG...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR TCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCGTTGCTAGAGCCTTaGCAACTTTCCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPPLLEP*QLSKTS
Trigger: GGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGG...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR TCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAAAGCTTAGGATGAGTTaGAAGGGTACTGCCAAAACG +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPKLRMS*KGTAKT
Trigger: CGTTTTGGCAGTACCCTTTCAACTCATCCTAAGCTT...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCATCACATGGTAAGCTTTaGTTTCCATCGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPSHGKL*FPSRGK
Trigger: CTTTCCTCTCGATGGAAATCAAAGCTTACCATGTGA...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAATGGGAACCCCTTGTATaGGAAGCTCCTCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQWEPLV*EAPPSE
Trigger: CTCTGAAGGAGGAGCTTCGCATACAAGGGGTTCCCA...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACTTTCAGCCACTGGGCTaGCGAACTGCTCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDFQPLG*RTAQKP
Trigger: AGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAA...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp AAACAGGTACTGTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGAGGTTTCTAGTTAACTaGAACAAGCCTGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: KQVLSGHSWETFPPFSHWRFLVN*NKPENL
Trigger: CAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCT...CCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGACAGTACCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp TCCTCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCATACACGTTTCCAACTGTaGAGGAGGTTTCTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: SSFRGARLHFFPSMQLYHTRFQL*RRFLVN
Trigger: GTTAACTAGAAACCTCCTGCACAGTTGGAAACGTGT...ATGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTCACACCGGGGAGTTTTaGTTACCTAATTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVKSSAPFFQKASDFPQAHTGEF*LPNSAS
Trigger: AGAAGCAGAATTAGGTAAGCAAAACTCCCCGGTGTG...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAATGTACCAGAGGTATATaGTATGAAACAACACACAAT +
Preference number: 4 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQCTRGI*YETTHN
Trigger: ATTGTGTGTTGTTTCATAGCATATACCTCTGGTACA...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAATTACTTGGTGGTGACTaGTGGGCAGTGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQLLGGD*WAVCAD
Trigger: GTCTGCACACACTGCCCAGCAGTCACCACCAAGTAA...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCGTCTCAAGGGAACTGTaGGAATTAGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPVSREL*ELVSPM
Trigger: CATTGGAGAGACTAATTCCCACAGTTCCCTTGAGAC...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp TTCATCAGATCCCTGTTCTGGCCCTCAACCCAGTGCATCTCCACTAAGGCATCGGGAACTCGTTTATGCTaGACCTTCAAATCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: FIRSLFWPSTQCISTKASGTRLC*TFKSVR
Trigger: TCTCACTGATTTGAAGGTCCAGCATAAACGAGTTCC...CGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCAGAACAGGGATCTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCATGGGGTGGTGTGGGCTaGCACAGCAGAAAATTTCTA +
Preference number: 4 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPWGGVG*HSRKFL
Trigger: TAGAAATTTTCTGCTGTGCCAGCCCACACCACCCCA...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGTGCCCGAGGGTATCCTaGCCCCAGTGCTACTGGACA +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVCPRVS*PQCYWT
Trigger: TGTCCAGTAGCACTGGGGCCAGGATACCCTCGGGCA...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR TCA 90 bp TCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGTGACAGAGACAGCATaGTATTCTAGGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SDLDRIQCTLLWEPLVCEVTETA*YSRQCC
Trigger: GCAGCACTGCCTAGAATATCATGCTGTCTCTGTCAC...TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTATAAAATCTCCTCCATaGCATGAAGCCTTAAACCTA +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSIKSPP*HEALNL
Trigger: TAGGTTTAAGGCTTCATGTCATGGAGGAGATTTTAT...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp AGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATCGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: RGDALRDNSFITDASTTNRQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACG...ATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGATTTCTTTCCCAGCATaGAGCTATACCATCTTAATC +
Preference number: 4 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSISFPA*SYTILI
Trigger: GATTAAGATGGTATAGCTGCATGCTGGGAAAGAAAT...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp CTCCTCCTTCAGAGGCGCCAGGCTGCATTTCTTTCCCAGCATGCAGCTATACCAATTTCTTTCCCAGCATaGAGCTATACCATCTTAATC +
Preference number: 4 (lower is better)
Translates to: LLLQRRQAAFLSQHAAIPISFPA*SYTILI
Trigger: GATTAAGATGGTATAGCTGCATGCTGGGAAAGAAAT...TGGTATAGCTGCATGCTGGGAAAGAAATGCAGCCTGGCGCCTCTGAAGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGCAGGGAACTCGTTTATaGTGGACCTTCAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSQGTRL*WTFKSV
Trigger: CACTGATTTGAAGGTCCAGCATAAACGAGTTCCCTG...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACTGGGCTGCCGAACTaGTCAGAAGCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYETGLPN*SEASWS
Trigger: GGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGT...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCGGTTACGTATGTAGGTaGAAAGCTGGTTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPGYVCR*KAGSSD
Trigger: ATCTGATGAACCAGCTTTGCACCTACATACGTAACC...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR GCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTACACGTTTCCAACTGTaGAGGAGGTTTCTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRTRFQL*RRFLVN
Trigger: GTTAACTAGAAACCTCCTGCACAGTTGGAAACGTGT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR GCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATTGGGTGCCTTCTGTGTaGCTCAGTCACACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNWVPSV*LSHTGE
Trigger: CTCCCCGGTGTGACTGAGGCACACAGAAGGCACCCA...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGGTATCCTGGCCCCAGTaGTACTGGACAAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVVSWPQ*YWTSTS
Trigger: GGACGTGCTTGTCCAGTAGCACTGGGGCCAGGATAC...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR GCA 90 bp TCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACATGCTGTTCTGTCACTaGCCGGAAAATCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: SLPGKSFSLASSEVVFLYMLFCH*PENHSV
Trigger: GACTGAATGATTTTCCGGGCAGTGACAGAACAGCAT...GTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTGTGAGTTTACTCCCTTaGCTTCCAATTGATTGGCAA +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRVSLLP*LPIDWQ
Trigger: TTGCCAATCAATTGGAAGCCAAGGGAGTAAACTCAC...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp CATTGTCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATCCCCTGGCCAGTTCTTaGCTATTGCCAGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: HCPTLTEFSVRYFGNPLYPLASS*LLPDSL
Trigger: CAAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGG...ATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTTACGTATGTAGGTTCTCCTGGGGGCCCCTaGCCAGTTCTTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: RRFLVNCNKPENLVTYVGSPGGP*PVLGYC
Trigger: GCAATAGCCAAGAACTGGCCAGGGGCCCCCAGGAGA...ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAATTTCTTGCATGCATTaGTTTACTCAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPISCMH*FTQSHL
Trigger: GAGATGGCTCTGAGTAAATCAATGCATGCAAGAAAT...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACATTTCTTGCATGCATTaGTTTACTCAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDISCMH*FTQSHL
Trigger: GAGATGGCTCTGAGTAAATCAATGCATGCAAGAAAT...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLAEVML*GIIPSS
Trigger: TGATGAAGGAATTATCCCTCAAAGCATCACCTCTGC...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR TCA 90 bp TCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAATTTCAATCCATGTCGTaGCAACGACTATGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SDLDRIQCTLLWEPLVCEFQSMS*QRLCLP
Trigger: CGGAAGGCATAGTCGTTGTCACGACATGGATTGAAA...TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp AAAAACTCCAAGCTAAGGCCCATCTCATTGTCCGACCTTGACAGAATTCAGTGTCCGTTGCTAGAGCCTTaGCAACTTTCCAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: KNSKLRPISLSDLDRIQCPLLEP*QLSKTS
Trigger: GGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGG...ACACTGAATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCTCCTTAGTGGGTTATTaGCCCCTTTGTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGSLVGY*PLCLCL
Trigger: CAGACACAGACAAAGGGGTCAATAACCCACTAAGGA...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCGGGACAGAAACACACTaGGACACAGAAACACCTTCT +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGGTETH*DTETPS
Trigger: AGAAGGTGTTTCTGTGTCTCAGTGTGTTTCTGTCCC...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGGGGGTTGCAGTGAGCTaGGATCACACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVGVAVS*DHTIAL
Trigger: GAGTGCAATGGTGTGATCTCAGCTCACTGCAACCCC...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR TCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCAAGCGGGGGTTGCAGTaGGCTGAGATCACACCATTG +
Preference number: 4 (lower is better)
Translates to: LSWMILLTNSNSPPSAMIKRGLQ*AEITPL
Trigger: CAATGGTGTGATCTCAGCTCACTGCAACCCCCGCTT...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR TCA 90 bp CTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACCTAAGCAGCATGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LPGKSFSLASSEVVFLYLSSMVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCATGCTGCT...TAGGTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTTATCTATTTCTTGCATaGATTGATTTACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSYLFLA*IDLLRA
Trigger: GGCTCTGAGTAAATCAATGCATGCAAGAAATAGATA...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACTTTGGATGCCAGATATaGAAAGTCAGGAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLPGKSFSLASSEVVFLYFGCQI*KVRRFV
Trigger: GACAAACCTCCTGACTTTGCATATCTGGCATCCAAA...GTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp CTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACCTAATCATCCACTTCTGTTaGGAGGAAATACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: LPGKSFSLASSEVVFLYLIIHFC*EEIPAI
Trigger: AATGGCTGGTATTTCCTCGCAACAGAAGTGGATGAT...TAGGTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGTGGCCCTCAACCCAGTaGATCTCCACTAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVWPSTQ*ISTKAS
Trigger: CGATGCCTTAGTGGAGATGCACTGGGTTGAGGGCCA...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR GCA 90 bp CAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCAGTAGGTTTCTAGTTAACTaGAACAAGCCTGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: QYAAFSSSSSTAKLRHSSRFLVN*NKPENL
Trigger: CAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCT...ACTGCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAACAGGTGTCAGGAATGTaGCATTTACCGGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEQVSGM*HLPGGP
Trigger: GGGACCACCCGGTAAATGGCACATTCCTGACACCTG...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCGCACCACGAATGTTATaGGTTTTCTCGGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FLHHGRQHHECYGFSRFLAPRML*VFSVSL
Trigger: TAGAGAAACCGAGAAAACCCATAACATTCGTGGTGC...GAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGTGCTCAGAAGCCTCTTaGTCCTGGGCTCCGTTGCTA +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVCSEAS*SWAPLL
Trigger: TAGCAACGGAGCCCAGGACCAAGAGGCTTCTGAGCA...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTGGCCCCAGTGCTACTaGACAAGCACGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LSWMILLTNSNSPPSAMIWPQCY*TSTSLD
Trigger: ATCCAAGGACGTGCTTGTCCAGTAGCACTGGGGCCA...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CCA 90 bp ATCTCCAGGCAACAAGAAGCCAACCACACCTGGGAGGGAACTGTGAGAAGCAACTTACCTATAGCAGCATaGTACTGTGACATCATCATA +
Preference number: 4 (lower is better)
Translates to: ISRQQEANHTWEGTVRSNLPIAA*YCDIII
Trigger: TATGATGATGTCACAGTACCATGCTGCTATAGGTAA...GTTGCTTCTCACAGTTCCCTCCCAGGTGTGGTTGGCTTCTTGTTGCCTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574752.5
3UTR CAA 72 bp GCAAAGCAGATTCCGAAGAACAAAAGCAGCTTTAGTTaGCCTGGGCAACAGGCTCAACTTCTGTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: AKQIPKNKSSFS*PGQQAQLLSPL
Trigger: AAGTGGAGACAGAAGTTGAGCCTGTTGCCCAGGCAAACTAAAGCTGCTTTTGTTCTTCGGAATCTGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGATTTCTTGCATGCATTaGTTTACTCAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSISCMH*FTQSHL
Trigger: GAGATGGCTCTGAGTAAATCAATGCATGCAAGAAAT...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp AAAAACTCCAAGCTAAGGCCCATCTCATTGTCCGACCTTGACAGAATTCAGTGTTTGTCAGAATCCTGGTaGCCGATCAGATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: KNSKLRPISLSDLDRIQCLSESW*PIRSST
Trigger: GGTAGAAGATCTGATCGGTCACCAGGATTCTGACAA...ACACTGAATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAACAAGTAAGGGGTAGATaGAAGATGCCCCCGTGCCTA +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEQVRGR*KMPPCL
Trigger: TAGGCACGGGGGCATCTTGCATCTACCCCTTACTTG...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGCAAGTAAGGGGTAGATaGAAGATGCCCCCGTGCCTA +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVQVRGR*KMPPCL
Trigger: TAGGCACGGGGGCATCTTGCATCTACCCCTTACTTG...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR GCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTGGGAACCCCTTGTATaGGAAGCTCCTCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSWMILLTNSNSPPSAMIWEPLV*EAPPSE
Trigger: CTCTGAAGGAGGAGCTTCGCATACAAGGGGTTCCCA...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAACAGGGAACTCGTTTATaGTGGACCTTCAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQQGTRL*WTFKSV
Trigger: CACTGATTTGAAGGTCCAGCATAAACGAGTTCCCTG...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATAGCCACTGGTCAGTATaGTGCCTTCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNSHWSV*CLLQLQ
Trigger: CTGGAGCTGGAGAAGGCAGCATACTGACCAGTGGCT...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACATGGAAACATCCAAATaGACAGAAGGCACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDMETSK*TEGTRL
Trigger: GAGCCGAGTGCCTTCTGTGCATTTGGATGTTTCCAT...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGCAAGTAAGGGGTAGATaGAAGATGCCCCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVQVRGR*KMPPCH
Trigger: ATGGCACGGGGGCATCTTGCATCTACCCCTTACTTG...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCCAATCAAAAAGCCACTaGTCAGTATGCTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGQSKSH*SVCCLL
Trigger: GAGAAGGCAGCATACTGACCAGTGGCTTTTTGATTG...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCGTGGTGATGGTACTGTaGCATCATCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGVVMVL*HHHKNS
Trigger: GGAGTTTTTATGATGATGTCACAGTACCATCACCAC...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTATGCTGCTTAAAATCTaGATATTTGGATGCCAGATA +
Preference number: 4 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRMLLKI*IFGCQI
Trigger: TATCTGGCATCCAAATATCCAGATTTTAAGCAGCAT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp TCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCGAAGCACCACGAATGTTATaGGTTTTCTCGGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SDLDRIQCTLLWEPLVCEAPRML*VFSVSL
Trigger: TAGAGAAACCGAGAAAACCCATAACATTCGTGGTGC...TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATCCCCTGGCCAGTTCTTaGCTATTGCCAGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNPLASS*LLPDSL
Trigger: CAAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGG...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGCCCAGTGAATATAGTTaGGTCTCAAGGGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVPSEYS*VSRELW
Trigger: CCACAGTTCCCTTGAGACTCAACTATATTCACTGGG...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGTTGTCAGAATCCTGGTaGCCGATCAGATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVLSESW*PIRSST
Trigger: GGTAGAAGATCTGATCGGTCACCAGGATTCTGACAA...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
CDS-3UTR TCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATCCCTCGGGAGTTTACTaGGGGCTTTCTGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNPSGVY*GLSVVT
Trigger: AGTAACAACAGAAAGCCCTCAGTAAACTCCCGAGGG...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACACGAAGCTTAGGATaGGTTGAAAGGGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYETRSLG*VERVLP
Trigger: TGGCAGTACCCTTTCAACTCATCCTAAGCTTCGTGT...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACATGCTGCTTAAAATCTaGATATTTGGATGCCAGATA +
Preference number: 4 (lower is better)
Translates to: SLPGKSFSLASSEVVFLYMLLKI*IFGCQI
Trigger: TATCTGGCATCCAAATATCCAGATTTTAAGCAGCAT...GTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CCA 90 bp TGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACACAGGCTTAAAGGCAATCTGGGTAGCAACTaGGTATTTCAAGAAAACACC +
Preference number: 4 (lower is better)
Translates to: CFNTQSILWKSLRHRLKGNLGSN*VFQENT
Trigger: GGTGTTTTCTTGAAATACCCAGTTGCTACCCAGATT...GCCTTTAAGCCTGTGTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
3UTR CAA 72 bp CCACAGGCTTTTCCATCTTTTCCACTCCTTGCAGTTTaGTTATTCCTGTCACAACTTAGAAGTTCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PQAFPSFPLLAV*LFLSQLRSSSA
Trigger: AGCACTCGAACTTCTAAGTTGTGACAGGAATAACAAAACTGCAAGGAGTGGAAAAGATGGAAAAGCCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR TCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGGCAGAGGTGATGCTTTaGGGGATAATTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVAEVML*GIIPSS
Trigger: TGATGAAGGAATTATCCCTCAAAGCATCACCTCTGC...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGCGTCAGAGCTCTGACTaGTTCGGGGTCTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVRQSSD*FGVFKI
Trigger: AATTTTAAAGACCCCGAAGCAGTCAGAGCTCTGACG...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCGTCTCAAGGGAACTGTaGGAATTAGTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LSWMILLTNSNSPPSAMIVSREL*ELVSPM
Trigger: CATTGGAGAGACTAATTCCCACAGTTCCCTTGAGAC...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp TCGAAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 4 (lower is better)
Translates to: SKIIPHRATNGPLVGFLLSCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...CAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CCA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACAAAACTGCTACAAAATaGTACTGTCAACAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDKTATK*YCQQAG
Trigger: TCCAGCCTGTTGACAGTACCATTTTGTAGCAGTTTT...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGGGACAAGCACGTCCTTaGATACCTATGTCAATTCCT +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVGQARP*IPMSIP
Trigger: AGGAATTGACATAGGTATCCAAGGACGTGCTTGTCC...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571298.5
3UTR CAA 72 bp CATCATCATAAAAACTCCAAGCTAAGGCCCATCTCATaGTCCGACCTTGACAGAATTCAGTGTACGTTACTT +
Preference number: 4 (lower is better)
Translates to: HHHKNSKLRPIS*SDLDRIQCTLL
Trigger: AAGTAACGTACACTGAATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAGCTTGGAGTTTTTATGATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
3UTR CAA 72 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTaGGTTACGTATGTAGGTGCAAAGCTGGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RRFLVNCNKPEN*VTYVGAKLVHQ
Trigger: CTGATGAACCAGCTTTGCACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR TCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATCTCATTGTCCGACCTTaGCAGAATTCAGTGTACGTT +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNLIVRP*QNSVYV
Trigger: AACGTACACTGAATTCTGTCAAGGTCGGACAATGAG...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAAATCATCCACTTCTGTTaGGAGGAAATACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEIIHFC*EEIPAI
Trigger: AATGGCTGGTATTTCCTCGCAACAGAAGTGGATGAT...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGATCATCCACTTCTGTTaGGAGGAAATACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVIIHFC*EEIPAI
Trigger: AATGGCTGGTATTTCCTCGCAACAGAAGTGGATGAT...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571298.5
ENST00000574752.5
CDS-3UTR CCA 90 bp GAAAAGGCTGACTTCCTCTTTTCCACAGGGAACTCGTTTATGCTGGACCTTCAAATGCTGCTTAAAATCTaGATATTTGGATGCCAGATA +
Preference number: 4 (lower is better)
Translates to: EKADFLFSTGNSFMLDLQMLLKI*IFGCQI
Trigger: TATCTGGCATCCAAATATCCAGATTTTAAGCAGCAT...TTGAAGGTCCAGCATAAACGAGTTCCCTGTGGAAAAGAGGAAGTCAGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAACAGGAGTGTCTTCTGTaGCACTTTCACCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEQECLL*HFHHFY
Trigger: ATAAAAGTGGTGAAAGTGCCACAGAAGACACTCCTG...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp ACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACAACACACAATTATAAAGCAGTGTACGTTACTTTaGGAACCCCTTGTATGCGAA +
Preference number: 4 (lower is better)
Translates to: TCPPVPEVYAMKQHTIIKQCTLL*EPLVCE
Trigger: TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTG...CTTTATAATTGTGTGTTGTTTCATAGCATATACCTCTGGTACAGGTGGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp AGGAGGTTTCTAGTTAACTGCAACAAGCCTGAAAATTTGGTTACGTATGTAGGTCAGTGTACGTTACTTTaGGAACCCCTTGTATGCGAA +
Preference number: 4 (lower is better)
Translates to: RRFLVNCNKPENLVTYVGQCTLL*EPLVCE
Trigger: TTCGCATACAAGGGGTTCCCAAAGTAACGTACACTG...ACCTACATACGTAACCAAATTTTCAGGCTTGTTGCAGTTAACTAGAAACCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAAGCACCACGAATGTTATaGGTTTTCTCGGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEAPRML*VFSVSL
Trigger: TAGAGAAACCGAGAAAACCCATAACATTCGTGGTGC...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp CCCATTTCTTCAAAGAAAAACTTGCCCACCTGTACCAGAGGTATATGCTATGAAAGGGAGGGTTGCACATaGAAAAGTCATAGATTATCT +
Preference number: 4 (lower is better)
Translates to: PISSKKNLPTCTRGICYEREGCT*KSHRLS
Trigger: AGATAATCTATGACTTTTGCATGTGCAACCCTCCCT...TTCATAGCATATACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGAAATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp ACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACAACACACAATTATAAAGGGAACTCGTTTATGCTaGACCTTCAAATCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TCPPVPEVYAMKQHTIIKGTRLC*TFKSVR
Trigger: TCTCACTGATTTGAAGGTCCAGCATAAACGAGTTCC...CTTTATAATTGTGTGTTGTTTCATAGCATATACCTCTGGTACAGGTGGGCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CCA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATTTCAAGAAAACACCGTaGACAGACTTGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNFKKTP*TDLSPF
Trigger: GAATGGAGACAAGTCTGTCCACGGTGTTTTCTTGAA...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR GCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGTATCTATTTCTTGCATaGATTGATTTACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVYLFLA*IDLLRA
Trigger: GGCTCTGAGTAAATCAATGCATGCAAGAAATAGATA...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CCA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGAGTTGTAGACTGTCATaGATGATCCTTTTAACAAAC +
Preference number: 4 (lower is better)
Translates to: WMILLTNSNSPPSAMISVSCRLS*MILLTN
Trigger: GTTTGTTAAAAGGATCATCCATGACAGTCTACAACT...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571298.5
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp ACAGCGGCAGCCTCGCCTTCCCGCAGAGCAGGCCCACAGGGGGTCCTCTCCTGGCTGGTAGGATTCCTCTaGCCACCCCACAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: TAAASPSRRAGPQGVLSWLVGFL*PPHRPL
Trigger: GAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAG...CCAGGAGAGGACCCCCTGTGGGCCTGCTCTGCGGGAAGGCGAGGCTGCCGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS GCA 90 bp CAGCACCAGAGACAGGACGACACGAGGACCCAGAGGGCGCCGCCATaGTCATTTCAGAAGGTGCAGCCTCCGTGTCCGTGGGTCCGCACC +
Preference number: 5 (lower is better)
Translates to: QHQRQDDTRTQRAPP*SFQKVQPPCPWVRT
Trigger: GGTGCGGACCCACGGACACGGAGGCTGCACCTTCTGAAATGAGCATGGCGGCGCCCTCTGGGTCCTCGTGTCGTCCTGTCTCTGGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS-3UTR CAA 90 bp ACAGCGGCAGCCTCGCCTTCCCGCAGAGCAGGCCCACAGGGGGTCCTCTCCTGGTCTCATTGTCCGACCTaGACAGAATTCAGTGTACGT +
Preference number: 5 (lower is better)
Translates to: TAAASPSRRAGPQGVLSWSHCPT*TEFSVR
Trigger: ACGTACACTGAATTCTGTCAAGGTCGGACAATGAGA...CCAGGAGAGGACCCCCTGTGGGCCTGCTCTGCGGGAAGGCGAGGCTGCCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp ACAGCGGCAGCCTCGCCTTCCCGCAGAGCAGGCCCACAGGGGGTCCTCTCCTGGTCAGGAGGTTTGTCCTaGTATCTATTTCTTGCATGC +
Preference number: 5 (lower is better)
Translates to: TAAASPSRRAGPQGVLSWSGGLS*YLFLAC
Trigger: GCATGCAAGAAATAGATACAAGGACAAACCTCCTGA...CCAGGAGAGGACCCCCTGTGGGCCTGCTCTGCGGGAAGGCGAGGCTGCCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCCTGGTAGGATTCCTCTaGCCACCCCACAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGLVGFL*PPHRPL
Trigger: GAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAG...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GTCCGGCCACTCCTGGGAGACGTTTCCCCCTTTCAGCCACTGGGCTGCCGAACTTACTTTGGGAACCCCTaGTATGCGAAGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: VRPLLGDVSPFQPLGCRTYFGNP*YAKLLL
Trigger: AAGGAGGAGCTTCGCATACAAGGGGTTCCCAAAGTA...AGTTCGGCAGCCCAGTGGCTGAAAGGGGGAAACGTCTCCCAGGAGTGGCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS GCA 90 bp GATAACTTGCAAAAGATTAGTTCTGCTGTTCGCCACCGTGCTGGATaGAGCACCAGAGACAGGACGACACGAGGACCCAGAGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: DNLQKISSAVRHRAG*STRDRTTRGPRGRR
Trigger: GCGGCGCCCTCTGGGTCCTCGTGTCGTCCTGTCTCTGGTGCTGCATCCAGCACGGTGGCGAACAGCAGAACTAATCTTTTGCAAGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS-3UTR CAA 90 bp TCCACAGCCAAGTTAAGGCACAGCAGTTCCGCTTCCTGTGTCTCTGCCGAGGGCGCCAGTTCTTGGCTATaGCCAGACTCTTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: STAKLRHSSSASCVSAEGASSWL*PDSLGV
Trigger: CACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGGC...GCCCTCGGCAGAGACACAGGAAGCGGAACTGCTGTGCCTTAACTTGGCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCGCCCCTGGCCAGTTCTaGGCTATTGCCAGACTCTTT +
Preference number: 5 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGAPGQF*AIARLF
Trigger: AAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGGC...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCGCTCCCTTTGTGGGATaGATGCAAGGTAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGAPFVG*MQGRPH
Trigger: ATGGGGCCTACCTTGCATCAATCCCACAAAGGGAGC...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCACACCGTGGACAGACTaGTCTCCATTCCCACGGGGA +
Preference number: 5 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSTPWTD*SPFPRG
Trigger: TCCCCGTGGGAATGGAGACAAGTCTGTCCACGGTGT...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS TCA 90 bp TGGCCCCTTCTCCTCCTATGTGCACAACTGCTGGGCGGCCACATCTaGTCCTGTACCAGAAACATAAGGGGAGACGGGATCCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: WPLLLLCAQLLGGHI*SCTRNIRGDGILLE
Trigger: CTCAAGGAGGATCCCGTCTCCCCTTATGTTTCTGGTACAGGATCAGATGTGGCCGCCCAGCAGTTGTGCACATAGGAGGAGAAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS-3UTR CAA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTTACTTTGGGAACCCCTaGTATGCGAAGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: WAAGRIPLATPQATPKQVYFGNP*YAKLLL
Trigger: AAGGAGGAGCTTCGCATACAAGGGGTTCCCAAAGTA...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGGCCAGTTCTTGGCTATaGCCAGACTCTTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSASSWL*PDSLGV
Trigger: CACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGGC...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTCCAAGGAAACTAGGTTaGGGCCCAGCAAATGACTCA +
Preference number: 5 (lower is better)
Translates to: WAAGRIPLATPQATPKQVPRKLG*GPANDS
Trigger: TGAGTCATTTGCTGGGCCCAAACCTAGTTTCCTTGG...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GGTCAGTATGCTGCCTTCTCCAGCTCCAGCTCCACAGCCAAGTTAAGGCACAGCGGAAGTGAAGGCGCTTaGATAAAAGGGCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: GQYAAFSSSSSTAKLRHSGSEGA*IKGPRV
Trigger: CACCCTTGGCCCTTTTATCAAAGCGCCTTCACTTCC...GCTGTGCCTTAACTTGGCTGTGGAGCTGGAGCTGGAGAAGGCAGCATACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp CGCTTCCTGTGTCTCTGCCGAGGGCCTGATCTAGCTGCTGCCAAGACATGCCAATCAGTGTACGTTACTTaGGGAACCCCTTGTATGCGA +
Preference number: 5 (lower is better)
Translates to: RFLCLCRGPDLAAAKTCQSVYVT*GTPCMR
Trigger: TCGCATACAAGGGGTTCCCAAAGTAACGTACACTGA...TTGGCATGTCTTGGCAGCAGCTAGATCAGGCCCTCGGCAGAGACACAGGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGTACTTTGGGAACCCCTaGTATGCGAAGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSYFGNP*YAKLLL
Trigger: AAGGAGGAGCTTCGCATACAAGGGGTTCCCAAAGTA...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCTCAGTGTACGTTACTTaGGGAACCCCTTGTATGCGA +
Preference number: 5 (lower is better)
Translates to: VLGSVARALTTFQNLHPSSVYVT*GTPCMR
Trigger: TCGCATACAAGGGGTTCCCAAAGTAACGTACACTGA...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TCCACGGACCAGGTTAAGAACACTGGTCAGAGGCTGGGAGTAGTGGCTCACGGCTCTCATTGTCCGACCTaGACAGAATTCAGTGTACGT +
Preference number: 5 (lower is better)
Translates to: STDQVKNTGQRLGVVAHGSHCPT*TEFSVR
Trigger: ACGTACACTGAATTCTGTCAAGGTCGGACAATGAGA...GCCGTGAGCCACTACTCCCAGCCTCTGACCAGTGTTCTTAACCTGGTCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGCCCCTGGCCAGTTCTaGGCTATTGCCAGACTCTTT +
Preference number: 5 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDAPGQF*AIARLF
Trigger: AAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGGC...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTGCCCCTGGCCAGTTCTaGGCTATTGCCAGACTCTTT +
Preference number: 5 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRAPGQF*AIARLF
Trigger: AAAGAGTCTGGCAATAGCCAAGAACTGGCCAGGGGC...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp CTTTCAGCCACTGGGCTGCCGAACTGCTCAGAAGCCTCTTGGTCCTGGGCTCCGAACAAGCCTGAAAATTaGGTTACGTATGTAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LSATGLPNCSEASWSWAPNKPEN*VTYVGA
Trigger: TGCACCTACATACGTAACCAAATTTTCAGGCTTGTT...CGGAGCCCAGGACCAAGAGGCTTCTGAGCAGTTCGGCAGCCCAGTGGCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CAA 90 bp GCCGTCTCCGAGCGCAGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACATTTTCTTCGCTTACTaGGTGGTGACTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AVSERRGDALRDNSFITDIFFAY*VVTAGQ
Trigger: CTGCCCAGCAGTCACCACCAAGTAAGCGAAGAAAAT...GTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCTGCGCTCGGAGACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CAA 90 bp TGGGCCGCTGGTAGGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTTCAGGAGGTTTGTCCTaGTATCTATTTCTTGCATGC +
Preference number: 5 (lower is better)
Translates to: WAAGRIPLATPQATPKQVSGGLS*YLFLAC
Trigger: GCATGCAAGAAATAGATACAAGGACAAACCTCCTGA...AACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCCTACCAGCGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGCTAAGGCCCATCTCATaGTCCGACCTTGACAGAATT +
Preference number: 5 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSLRPIS*SDLDRI
Trigger: AATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAG...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTACAACCCTTCTGACCTaGCAGAGGCAGTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SFITDASTTNVMGFLGFSTTLLT*QRQSRA
Trigger: AGCTCTGGACTGCCTCTGCAAGGTCAGAAGGGTTGT...AGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CAA 90 bp GAGCTGGTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCAACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: ELVVKSSAPFFQKASDFPTSHSR*LQVRGR
Trigger: TCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGT...TGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGACCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp TGGGAGGGAACTGTGAGAAGCAACAGATGCTGTTCTGTCACTGCCCGGAAAATCACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: WEGTVRSNRCCSVTARKITSHSR*LQVRGR
Trigger: TCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGT...GATTTTCCGGGCAGTGACAGAACAGCATCTGTTGCTTCTCACAGTTCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CAA 90 bp GTCGTGAAGTCATCAGCTCCCTTCTTTCAAAAGGCCTCGGATTTCCCACAGGCTCTATTGCCAGACTCTTaGGGGGTGGGCTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VVKSSAPFFQKASDFPQALLPDS*GVGFFS
Trigger: AGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAG...AGCCTGTGGGAAATCCGAGGCCTTTTGAAAGAAGGGAGCTGATGACTTCACGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GCAACATCAAAACAGCCAGGTGTCAGGAATGTGCCATTTACCGGGTGGTCCCCATCCGTTGCTAGAGCCTaGACAACTTTCCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: ATSKQPGVRNVPFTGWSPSVARA*TTFQNL
Trigger: GAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGA...TGGGGACCACCCGGTAAATGGCACATTCCTGACACCTGGCTGTTTTGATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCAACAACCCTTCTGACCTaGCAGAGGCAGTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPTTLLT*QRQSRA
Trigger: AGCTCTGGACTGCCTCTGCAAGGTCAGAAGGGTTGT...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGGCCCCCGTGCCATTTTaGCCCGAGGGTATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: WMILLTNSNSPPSAMISVAPVPF*PEGILA
Trigger: GGCCAGGATACCCTCGGGCAAAAATGGCACGGGGGC...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CAA 90 bp GTCCTGGGCTCCGTTGCTAGAGCCTTGACAACTTTCCAAAACCTCCACCCCTCCGCAAAGTCAGGAGGTTaGTCCTTGTATCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: VLGSVARALTTFQNLHPSAKSGG*SLYLFL
Trigger: AAGAAATAGATACAAGGACAAACCTCCTGACTTTGC...GGAGGGGTGGAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGAGCCCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp ATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCACCCCTAAGGCCCATCTCATaGTCCGACCTTGACAGAATT +
Preference number: 5 (lower is better)
Translates to: IIPHRATNGPLVGFLLPPLRPIS*SDLDRI
Trigger: AATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAG...GGGTGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGCTATTGCCAGACTCTTaGGGGGTGGGCTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSLLPDS*GVGFFS
Trigger: AGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAG...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCCTATTGCCAGACTCTTaGGGGGTGGGCTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: FLHHGRQHHECYGFSRFLLLPDS*GVGFFS
Trigger: AGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAG...GAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGTCCTCAGGAGCTCGACTGAGGGCTTTCTGTaGTTACTGATGACCACAATT +
Preference number: 5 (lower is better)
Translates to: FGGGLFLFQGLNDVLRSSTEGFL*LLMTTI
Trigger: AATTGTGGTCATCAGTAACAACAGAAAGCCCTCAGT...CGAGCTCCTGAGGACGTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576556.5
CDS-3UTR CAA 90 bp CTAGGCGGAGGTCTTCGAGGATTTCGTGAGTTTACTCCCTTTTATGAGATCAGAAGGCAGGATAATCGCTaGAATCCAGGAAGCGGGGGT +
Preference number: 5 (lower is better)
Translates to: LGGGLRGFREFTPFYEIRRQDNR*NPGSGG
Trigger: ACCCCCGCTTCCTGGATTCAAGCGATTATCCTGCCT...TCTGATCTCATAAAAGGGAGTAAACTCACGAAATCCTCGAAGACCTCCGCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS-3UTR CAA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACTATCATCCACTTCTGTaGCGAGGAAATACCAGCCAT +
Preference number: 5 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDYHPLL*RGNTSH
Trigger: ATGGCTGGTATTTCCTCGCAACAGAAGTGGATGATA...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CAA 90 bp AGAGGTGATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATTCAGTGTACGTTACTTaGGGAACCCCTTGTATGCGA +
Preference number: 5 (lower is better)
Translates to: RGDALRDNSFITDASTTNSVYVT*GTPCMR
Trigger: TCGCATACAAGGGGTTCCCAAAGTAACGTACACTGA...ATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATCACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACTCTCATTGTCCGACCTaGACAGAATTCAGTGTACGT +
Preference number: 5 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDSHCPT*TEFSVR
Trigger: ACGTACACTGAATTCTGTCAAGGTCGGACAATGAGA...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TCACTGCCCGGAAAATCATTCAGTCTGGCCAGCTCAGAGGTGGTTTTCCTTTACCTAAGGCCCATCTCATaGTCCGACCTTGACAGAATT +
Preference number: 5 (lower is better)
Translates to: SLPGKSFSLASSEVVFLYLRPIS*SDLDRI
Trigger: AATTCTGTCAAGGTCGGACAATGAGATGGGCCTTAG...GTAAAGGAAAACCACCTCTGAGCTGGCCAGACTGAATGATTTTCCGGGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574752.5
CDS-3UTR CAA 90 bp CATTGTCCGACCTTGACAGAATTCAGTGTACGTTACTTTGGGAACCCCTTGTATGCCAGTTCTTGGCTATaGCCAGACTCTTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: HCPTLTEFSVRYFGNPLYASSWL*PDSLGV
Trigger: CACCCCCAAAGAGTCTGGCAATAGCCAAGAACTGGC...ATACAAGGGGTTCCCAAAGTAACGTACACTGAATTCTGTCAAGGTCGGACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp AAGATAATTCCACATCGTGCTACTAATGGGCCGCTGGTAGGATTCCTCTTGCCAGGGTTATTGACCCCTTaGTCTGTGTCTGAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: KIIPHRATNGPLVGFLLPGLLTP*SVSEGS
Trigger: AGAACCCTCAGACACAGACAAAGGGGTCAATAACCC...TGGCAAGAGGAATCCTACCAGCGGCCCATTAGTAGCACGATGTGGAATTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTATCCTTAGTGGGTTATaGACCCCTTTGTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRILSGL*TPLSVS
Trigger: AGACACAGACAAAGGGGTCAATAACCCACTAAGGAT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS TCA 90 bp AAAGGGGCAGATTTTTATCCAGGCAGCCACCGTGGGTGTGGACACTaGGTAATAAGGAAAGAAATGCAGTTCAGAAGCAAAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: KGADFYPGSHRGCGH*VIRKEMQFRSKEGG
Trigger: TCCTCCCTCTTTGCTTCTGAACTGCATTTCTTTCCTTATTACTCAGTGTCCACACCCACGGTGGCTGCCTGGATAAAAATCTGCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS-3UTR CAA 90 bp GGATTCCTCTTGCCACCCCACAGGCCACTCCAAAGCAAGTTACTATCAACACGTACTGAGGGCTTTCTGTaGTTACTGATGACCACAATT +
Preference number: 5 (lower is better)
Translates to: GFLLPPHRPLQSKLLSTRTEGFL*LLMTTI
Trigger: AATTGTGGTCATCAGTAACAACAGAAAGCCCTCAGT...ACGTGTTGATAGTAACTTGCTTTGGAGTGGCCTGTGGGGTGGCAAGAGGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263092.11
ENST00000576556.5
CDS-3UTR CAA 90 bp GCTATTGCCAGACTCTTTGGGGGTGGGCTTTTTCTCTTCCAAGGCCTGAATGACGCAAAGTCAGGAGGTTaGTCCTTGTATCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: AIARLFGGGLFLFQGLNDAKSGG*SLYLFL
Trigger: AAGAAATAGATACAAGGACAAACCTCCTGACTTTGC...GTCATTCAGGCCTTGGAAGAGAAAAAGCCCACCCCCAAAGAGTCTGGCAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGGTTTCTCTAATTTCCGTTGCTAGAGCCTaGACAACTTTCCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: SSRTPAPRMLWVFSVSLISVARA*TTFQNL
Trigger: GAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGA...AATTAGAGAAACCGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp CTAGGCGGAGGTCTTCGAGGATTTCGTGAGTTTACTCCCTTTTATGAGATCAGATGGACAAGCACGTCCTaGGATACCTATGTCAATTCC +
Preference number: 5 (lower is better)
Translates to: LGGGLRGFREFTPFYEIRWTSTS*DTYVNS
Trigger: GGAATTGACATAGGTATCCAAGGACGTGCTTGTCCA...TCTGATCTCATAAAAGGGAGTAAACTCACGAAATCCTCGAAGACCTCCGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS CCA 90 bp ATCCATGGACAGGTATTCAGGGAGGCTCCAGGAACCAATCCCCATTaGACAGTGAGAAGCAACTGTAATTCCGTTTTTCTATGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: IHGQVFREAPGTNPH*TVRSNCNSVFLCRD
Trigger: ATCTCTACATAGAAAAACGGAATTACAGTTGCTTCTCACTGTCCAATGGGGATTGGTTCCTGGAGCCTCCCTGAATACCTGTCCATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS-3UTR CAA 90 bp GGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGGGTTTTCTCGTATTTCTTGCATGCATaGATTTACTCAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: GIIPSSRTPAPRMLWVFSYFLHA*IYSEPS
Trigger: AGATGGCTCTGAGTAAATCAATGCATGCAAGAAATA...CGAGAAAACCCATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp TGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCTGTGACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: WMILLTNSNSPPSAMISVTSHSR*LQVRGR
Trigger: TCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGT...CACAGAGATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571298.5
ENST00000574752.5
CDS-3UTR CAA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACTATCATCCACTTCTGTaGCGAGGAAATACCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDYHPLL*RGNTSH
Trigger: ATGGCTGGTATTTCCTCGCAACAGAAGTGGATGATA...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACTCTTCAAAGAAAAACTaGCCCACCTGTACCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDSSKKN*PTCTRG
Trigger: ACCTCTGGTACAGGTGGGCAAGTTTTTCTTTGAAGA...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp GATGCTTTGAGGGATAATTCCTTCATCACGGACGCCAGCACCACGAATGTTATGTATTTCTTGCATGCATaGATTTACTCAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: DALRDNSFITDASTTNVMYFLHA*IYSEPS
Trigger: AGATGGCTCTGAGTAAATCAATGCATGCAAGAAATA...CATAACATTCGTGGTGCTGGCGTCCGTGATGAAGGAATTATCCCTCAAAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp CTGTCATGGATGATCCTTTTAACAAACTCTAATTCACCTCCTTCTGCCATGATCTCCGTTGCTAGAGCCTaGACAACTTTCCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: LSWMILLTNSNSPPSAMISVARA*TTFQNL
Trigger: GAGGTTTTGGAAAGTTGTCAAGGCTCTAGCAACGGA...GATCATGGCAGAAGGAGGTGAATTAGAGTTTGTTAAAAGGATCATCCATGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574752.5
ENST00000576556.5
CDS-3UTR CAA 90 bp AGAAACACCTTCTGTGCTTCAATACACAGAGCATTCTCTGGAAATCCCTACGACCCACTCCTTGCAGTTTaGTTATTCCTGTCACAACTT +
Preference number: 5 (lower is better)
Translates to: RNTFCASIHRAFSGNPYDPLLAV*LFLSQL
Trigger: AAGTTGTGACAGGAATAACAAAACTGCAAGGAGTGG...GTCGTAGGGATTTCCAGAGAATGCTCTGTGTATTGAAGCACAGAAGGTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS CCA 90 bp GCTCACTCTTCCATTCAGATTTATCTGAACATGCTGCTTAAAATCTaGATATTTGGATGCCAGATATGCAAAGTCAGGAGGTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: AHSSIQIYLNMLLKI*IFGCQICKVRRFVL
Trigger: AAGGACAAACCTCCTGACTTTGCATATCTGGCATCCAAATATCCAGATTTTAAGCAGCATGTTCAGATAAATCTGAATGGAAGAGTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263092.11
ENST00000574752.5
ENST00000576556.5
ENST00000576976.2
CDS-3UTR CAA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATGCAAAGTCAGGAGGTTaGTCCTTGTATCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNAKSGG*SLYLFL
Trigger: AAGAAATAGATACAAGGACAAACCTCCTGACTTTGC...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp AATGTAGGGTCACATCACCAAGATTTAATTTCATACCAACCCCGCAACATGAATAACAAGCCTGAAAATTaGGTTACGTATGTAGGTGCA +
Preference number: 5 (lower is better)
Translates to: NVGSHHQDLISYQPRNMNNKPEN*VTYVGA
Trigger: TGCACCTACATACGTAACCAAATTTTCAGGCTTGTT...ATTCATGTTGCGGGGTTGGTATGAAATTAAATCTTGGTGATGTGACCCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS-3UTR CAA 90 bp ACTTGCCCACCTGTACCAGAGGTATATGCTATGAAACAACACACAATTATAAAGTATTTCTTGCATGCATaGATTTACTCAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: TCPPVPEVYAMKQHTIIKYFLHA*IYSEPS
Trigger: AGATGGCTCTGAGTAAATCAATGCATGCAAGAAATA...CTTTATAATTGTGTGTTGTTTCATAGCATATACCTCTGGTACAGGTGGGCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263092.11
CDS GCA 72 bp GGACCCAGAGGGCGCCGCCATGCTCATTTCAGAAGGTaGAGCCTCCGTGTCCGTGGGTCCGCACCCATGGAG +
Preference number: 6 (lower is better)
Translates to: GPRGRRHAHFRR*SLRVRGSAPME
Trigger: CTCCATGGGTGCGGACCCACGGACACGGAGGCTGCACCTTCTGAAATGAGCATGGCGGCGCCCTCTGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS GCA 72 bp AGACAGGACGACACGAGGACCCAGAGGGCGCCGCCATaGTCATTTCAGAAGGTGCAGCCTCCGTGTCCGTGG +
Preference number: 6 (lower is better)
Translates to: RQDDTRTQRAPP*SFQKVQPPCPW
Trigger: CCACGGACACGGAGGCTGCACCTTCTGAAATGAGCATGGCGGCGCCCTCTGGGTCCTCGTGTCGTCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS TCA 72 bp GACCAGAAGCCGATTCTTGCAGAGGCAGTCCAGAGCTaGGGGGCCAGCTTGAGCCAGCTTGCAATCCCTCGG +
Preference number: 6 (lower is better)
Translates to: DQKPILAEAVQS*GASLSQLAIPR
Trigger: CCGAGGGATTGCAAGCTGGCTCAAGCTGGCCCCTCAGCTCTGGACTGCCTCTGCAAGAATCGGCTTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574623.1
CDS CCA 72 bp CTGCCCCAGGCCACTCAGGAATGGAGAGCTGCTAGCTaGACCTGGGTAGGTCACCATTACTCACTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: LPQATQEWRAAS*TWVGHHYSLGL
Trigger: AAGCCCCAGTGAGTAATGGTGACCTACCCAGGTCCAGCTAGCAGCTCTCCATTCCTGAGTGGCCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS GCA 72 bp CCGTGCCATTTTTGCCCGAGGGTATCCTGGCCCCAGTaGTACTGGACAAGCACGTCCTTGGATACCTATGTC +
Preference number: 6 (lower is better)
Translates to: PCHFCPRVSWPQ*YWTSTSLDTYV
Trigger: GACATAGGTATCCAAGGACGTGCTTGTCCAGTAGCACTGGGGCCAGGATACCCTCGGGCAAAAATGGCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS TCA 72 bp CTCCTCCTATGTGCACAACTGCTGGGCGGCCACATCTaGTCCTGTACCAGAAACATAAGGGGAGACGGGATC +
Preference number: 6 (lower is better)
Translates to: LLLCAQLLGGHI*SCTRNIRGDGI
Trigger: GATCCCGTCTCCCCTTATGTTTCTGGTACAGGATCAGATGTGGCCGCCCAGCAGTTGTGCACATAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS GCA 72 bp CAAAAGATTAGTTCTGCTGTTCGCCACCGTGCTGGATaGAGCACCAGAGACAGGACGACACGAGGACCCAGA +
Preference number: 6 (lower is better)
Translates to: QKISSAVRHRAG*STRDRTTRGPR
Trigger: TCTGGGTCCTCGTGTCGTCCTGTCTCTGGTGCTGCATCCAGCACGGTGGCGAACAGCAGAACTAATCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 72 bp TGGACCTGGGTAGGTCACCATTACTCACTGGGGCTTTaGTCTGGCATGAAAGGTGACGGGAGAAAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: WTWVGHHYSLGL*SGMKGDGRKGQ
Trigger: CTGCCCCTTTCTCCCGTCACCTTTCATGCCAGACAAAAGCCCCAGTGAGTAATGGTGACCTACCCAGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS TCA 72 bp GGCTGGGCCAGTCAACTGAGCCTGATTCCCCCAGTCTaGATGATGAGTGGGACTCTGAATTCCTTTGACAGA +
Preference number: 6 (lower is better)
Translates to: GWASQLSLIPPV*MMSGTLNSFDR
Trigger: TCTGTCAAAGGAATTCAGAGTCCCACTCATCATTCAGACTGGGGGAATCAGGCTCAGTTGACTGGCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 72 bp CCACTTCTGTTGCGAGGAAATACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGATGCAAGATGCCCCCG +
Preference number: 6 (lower is better)
Translates to: PLLLRGNTSHSR*LQVRGRCKMPP
Trigger: CGGGGGCATCTTGCATCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGTATTTCCTCGCAACAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263092.11
ENST00000571298.5
ENST00000571669.6
ENST00000574752.5
CDS TCA 72 bp CCGACAGCATCTACACCACACAGAACCCTCACCTTCTaGTATAAGCAACACACGACATGCATGGTAGCCAGC +
Preference number: 6 (lower is better)
Translates to: PTASTPHRTLTF*YKQHTTCMVAS
Trigger: GCTGGCTACCATGCATGTCGTGTGTTGCTTATATCAGAAGGTGAGGGTTCTGTGTGGTGTAGATGCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS GCA 72 bp ACCAGCCATTCAAGGTTGCTCCAAGTAAGGGGTAGATaGAAGATGCCCCCGTGCCTATGTCAATTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TSHSRLLQVRGR*KMPPCLCQFLF
Trigger: GAAGAGGAATTGACATAGGCACGGGGGCATCTTGCATCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263092.11
ENST00000571669.6
ENST00000574752.5
CDS CAA 72 bp TCCCTAACCCCCAAATCTGGAACGCTCCAACGCACATaGCCTTTGAGCAACACATCAGTGCTCAAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: SLTPKSGTLQRT*PLSNTSVLKGC
Trigger: GCAACCTTTGAGCACTGATGTGTTGCTCAAAGGCAATGTGCGTTGGAGCGTTCCAGATTTGGGGGTTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577148.1
CDS CAA 90 bp GCCACCGCACCCGGCCTTCTGAACCCAGCTGCTTTCTTGGAGATCTaGGTATTACTCCTGGCTTTTGGAAAGTTACTGTTTGAAGATCAC +
Preference number: 6 (lower is better)
Translates to: ATAPGLLNPAAFLEI*VLLLAFGKLLFEDH
Trigger: GTGATCTTCAAACAGTAACTTTCCAAAAGCCAGGAGTAATACCAAGATCTCCAAGAAAGCAGCTGGGTTCAGAAGGCCGGGTGCGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 90 bp ACATATCATCCACTTCTGTTGCGAGGAAATACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGATGCAAGATGCCCCCGTGCCTATGT +
Preference number: 6 (lower is better)
Translates to: TYHPLLLRGNTSHSR*LQVRGRCKMPPCLC
Trigger: ACATAGGCACGGGGGCATCTTGCATCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGTATTTCCTCGCAACAGAAGTGGATGATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263092.11
ENST00000571669.6
ENST00000574752.5
CDS CAA 72 bp ACCCCCAAATCTGGAACGCTCCAACGCACATTGCCTTaGAGCAACACATCAGTGCTCAAAGGTTGCAGATTT +
Preference number: 6 (lower is better)
Translates to: TPKSGTLQRTLP*SNTSVLKGCRF
Trigger: AAATCTGCAACCTTTGAGCACTGATGTGTTGCTCAAAGGCAATGTGCGTTGGAGCGTTCCAGATTTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577148.1
CDS CAA 72 bp AGCAAACAGAGCGGAACTCCACTCCACTGTGATAACTaGCAAAAGATTAGTTCTGCTGTTCGCCACCGTGCT +
Preference number: 6 (lower is better)
Translates to: SKQSGTPLHCDN*QKISSAVRHRA
Trigger: AGCACGGTGGCGAACAGCAGAACTAATCTTTTGCAAGTTATCACAGTGGAGTGGAGTTCCGCTCTGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 90 bp ACATATCATCCACTTCTGTTGCGAGGAAATACCAGCCATTCAAGGTaGCTCCAAGTAAGGGGTAGATGCAAGATGCCCCCGTGCCATTTT +
Preference number: 6 (lower is better)
Translates to: TYHPLLLRGNTSHSR*LQVRGRCKMPPCHF
Trigger: AAAATGGCACGGGGGCATCTTGCATCTACCCCTTACTTGGAGCAACCTTGAATGGCTGGTATTTCCTCGCAACAGAAGTGGATGATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571298.5
CDS TCA 72 bp TCAGGGAGGCTCCAGGAACCAATCCCCATTGGACAGTaGGAAGCAACTGTAATTCCGTTTTTCTATGTAGAG +
Preference number: 6 (lower is better)
Translates to: SGRLQEPIPIGQ*EATVIPFFYVE
Trigger: CTCTACATAGAAAAACGGAATTACAGTTGCTTCTCACTGTCCAATGGGGATTGGTTCCTGGAGCCTCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CCA 72 bp CAGGTATTCAGGGAGGCTCCAGGAACCAATCCCCATTaGACAGTGAGAAGCAACTGTAATTCCGTTTTTCTA +
Preference number: 6 (lower is better)
Translates to: QVFREAPGTNPH*TVRSNCNSVFL
Trigger: TAGAAAAACGGAATTACAGTTGCTTCTCACTGTCCAATGGGGATTGGTTCCTGGAGCCTCCCTGAATACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 72 bp ATACCTGAGGATGTGCATAGGTTACATGTAAGGGATTaGAGCATCATCCATGGACAGGTATTCAGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: IPEDVHRLHVRD*SIIHGQVFREA
Trigger: AGCCTCCCTGAATACCTGTCCATGGATGATGCTCAAATCCCTTACATGTAACCTATGCACATCCTCAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CCA 72 bp ATCAAGAAAAACTGGATCCAAAGGACTGGCCCAACCTaGATATATTCTAGAGTAGAAGGACAGCTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: IKKNWIQRTGPT*IYSRVEGQLER
Trigger: TCTTTCCAGCTGTCCTTCTACTCTAGAATATATCCAGGTTGGGCCAGTCCTTTGGATCCAGTTTTTCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 72 bp TCTTGGTATTACTCCTGGCTTTTGGAAAGTTACTGTTaGAAGATCACTCAGCATTTCCCCTCCAGTATCTTC +
Preference number: 6 (lower is better)
Translates to: SWYYSWLLESYC*KITQHFPSSIF
Trigger: GAAGATACTGGAGGGGAAATGCTGAGTGATCTTCAAACAGTAACTTTCCAAAAGCCAGGAGTAATACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CAA 72 bp CTGCTTTCTTGGAGATCTTGGTATTACTCCTGGCTTTaGGAAAGTTACTGTTTGAAGATCACTCAGCATTTC +
Preference number: 6 (lower is better)
Translates to: LLSWRSWYYSWL*ESYCLKITQHF
Trigger: GAAATGCTGAGTGATCTTCAAACAGTAACTTTCCAAAAGCCAGGAGTAATACCAAGATCTCCAAGAAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571332.5
CDS CCA 72 bp TCCATTCAGATTTATCTGAACATGCTGCTTAAAATCTaGATATTTGGATGCCAGATATGCAAAGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SIQIYLNMLLKI*IFGCQICKVRR
Trigger: CCTCCTGACTTTGCATATCTGGCATCCAAATATCCAGATTTTAAGCAGCATGTTCAGATAAATCTGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263092.11
ENST00000574752.5
ENST00000576556.5
ENST00000576976.2