Pregenerated sensors for METTL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000037897Ensembl transcript IDs: ENST00000257848.7, ENST00000324871.12, ENST00000548681.1, ENST00000549773.1, ENST00000553125.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTaGCCCTGGCCGGGTAACTGCCCTTTCTGGGGCACAAGTTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: LWLHRAAQLHFWRLM*PWPGNCPFWGTSSP Trigger: AGGGGAACTTGTGCCCCAGAAAGGGCAGTTACCCGGCCAGGGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR TCA 90 bp | ATCTCCTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTaGTGTGACCCTGGCCGGGTAACTGCCCTTTCTGGGGCACAAGTT | + |
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Preference number: 1 (lower is better) Translates to: ISSGFTGLPNSTSGG*CDPGRVTALSGAQV Trigger: AACTTGTGCCCCAGAAAGGGCAGTTACCCGGCCAGGGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR TCA 90 bp | TCAAGTCTTACGCAGGGAGAGGACAGGAGGATGGTAGAAGGCATATaGTACATACTCCACCCTTTCCTGAGAAATGGCAGAATAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: SSLTQGEDRRMVEGI*YILHPFLRNGRIGM Trigger: CATGCCTATTCTGCCATTTCTCAGGAAAGGGTGGAGTATGTATCATATGCCTTCTACCATCCTCCTGTCCTCTCCCTGCGTAAGACTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTGACCTCTCCCGAGACTGGCTaGCTAATGCACTGGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: SPLASQGCPTPLLAVDVTSPETG*LMHWDP Trigger: AGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGA...GGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR-3UTR CCA 90 bp | GAACACAGATTCCCCAGGTCAAGTCTTACGCAGGGAGAGGACAGGAGGATGGTACCCTTTCCTGAGAAATaGCAGAATAGGCATGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: EHRFPRSSLTQGEDRRMVPFPEK*QNRHVY Trigger: GTACACATGCCTATTCTGCCATTTCTCAGGAAAGGG...TACCATCCTCCTGTCCTCTCCCTGCGTAAGACTTGACCTGGGGAATCTGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| 3UTR TCA 72 bp | CACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTaGCCCTGGCCGGGTAACTGCCCTTTCTGGGGCACA | + |
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Preference number: 3 (lower is better) Translates to: HRAAQLHFWRLM*PWPGNCPFWGT Trigger: TGTGCCCCAGAAAGGGCAGTTACCCGGCCAGGGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR GCA 72 bp | TTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTaGCTAATGCACTGGGATCCTACTTTGTGTTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: FWGTSSPSPETG*LMHWDPTLCLC Trigger: GCACAAACACAAAGTAGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR CCA 72 bp | CCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTaGCTGCCTAATGCACTGGGATCCTACTTTGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PFLGHKFPFSRD*LPNALGSYFVF Trigger: AAACACAAAGTAGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| 3UTR TCA 72 bp | ACGCAGGGAGAGGACAGGAGGATGGTAGAAGGCATATaGTACATACTCCACCCTTTCCTGAGAAATGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: TQGEDRRMVEGI*YILHPFLRNGR Trigger: TCTGCCATTTCTCAGGAAAGGGTGGAGTATGTATCATATGCCTTCTACCATCCTCCTGTCCTCTCCCTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTGACCGTTCCGAGTCTCGGCTaGCATGATCCCAGTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: SPLASQGCPTPLLAVDVTVPSLG*HDPSPG Trigger: CCCCGGACTGGGATCATGGCAGCCGAGACTCGGAAC...GGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR TCA 90 bp | TCTCCTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTGACCTTCTGGCGGTTGATGTaGCCCTGGCCGGGTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: SPLASQGCPTPLLAVDVTFWRLM*PWPGNC Trigger: GCAGTTACCCGGCCAGGGTCACATCAACCGCCAGAA...GGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR TCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGGAGTCTCGGCTGCCATaGTCCCAGTCCGGGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMESRLP*SQSGVS Trigger: AGAAACCCCGGACTGGGATCATGGCAGCCGAGACTC...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR TCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGTCCACTTCTGGCGGTTaGTGTGACCCTGGCCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMSTSGG*CDPGRV Trigger: TACCCGGCCAGGGTCACATCAACCGCCAGAAGTGGA...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR GCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCCCTGGCCGGGTAACTaGCCTTTCTGGGGCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMPWPGN*PFWGTS Trigger: ACTTGTGCCCCAGAAAGGGCAGTTACCCGGCCAGGG...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGGCGTGTGGTCCGCCATaGGGTTGGAGTGAGCACGTT | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMACGPP*GWSEHV Trigger: AACGTGCTCACTCCAACCCCATGGCGGACCACACGC...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTGGCCAGTCCATCTCCTCTaGCTTCACAGGGCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PFWGTSSPSPETGCLMHWPVHLL*LHRAAQ Trigger: TTGGGCAGCCCTGTGAAGCCAGAGGAGATGGACTGG...CCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCCCTTCTCCCGAGACTaGCTGCCTAATGCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMPFSRD*LPNALG Trigger: TCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGG...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CCA 90 bp | TTAGGGAACACAGATTCCCCAGGTCAAGTCTTACGCAGGGAGAGGACAGGAGGAGCGTGTGGTCCGCCATaGGGTTGGAGTGAGCACGTT | + |
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Preference number: 4 (lower is better) Translates to: LGNTDSPGQVLRRERTGGACGPP*GWSEHV Trigger: AACGTGCTCACTCCAACCCCATGGCGGACCACACGC...TCCTCCTGTCCTCTCCCTGCGTAAGACTTGACCTGGGGAATCTGTGTTCCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGAGACAGGCGATGTTCTaGAAGCCACCTGCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMRQAMF*KPPAGA Trigger: AGCTCCTGCAGGTGGCTTCCAGAACATCGCCTGTCT...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CCA 90 bp | CCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTGGGGTAACTGCCCTTTCTaGGGCACAAGTTCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PFWGTSSPSPETGCLMHWGNCPF*GTSSPS Trigger: AGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTTACC...CCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR GCA 90 bp | GTTATCCCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGGTTCCGAGTCTCGGCTaGCATGATCCCAGTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VIPGSTKQTEVVIEPSKQVPSLG*HDPSPG Trigger: CCCCGGACTGGGATCATGGCAGCCGAGACTCGGAAC...CTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGGGATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGGGCTGCCTAATGCACTaGGATCCTACTTTGTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NCPFWGTSSPSPETGCLMGCLMH*DPTLCL Trigger: CAAACACAAAGTAGGATCCCAGTGCATTAGGCAGCC...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR GCA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGAGTTCCGAGTCTCGGCTaGCATGATCCCAGTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRVPSLG*HDPSPG Trigger: CCCCGGACTGGGATCATGGCAGCCGAGACTCGGAAC...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS-3UTR TCA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGAGAGTCTCGGCTGCCATaGTCCCAGTCCGGGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRESRLP*SQSGVS Trigger: AGAAACCCCGGACTGGGATCATGGCAGCCGAGACTC...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGAGCGTGTGGTCCGCCATaGGGTTGGAGTGAGCACGTT | + |
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Preference number: 4 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRACGPP*GWSEHV Trigger: AACGTGCTCACTCCAACCCCATGGCGGACCACACGC...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | GTTATCCCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGCCAGTCCATCTCCTCTaGCTTCACAGGGTAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: VIPGSTKQTEVVIEPSKQPVHLL*LHRVAQ Trigger: CTGCGCTACCCTGTGAAGCCAGAGGAGATGGACTGG...CTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGGGATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | AGAAGGCATATGATACATACTCCACCCTTTCCTGAGAAATGGCAGAATAGGCATCCAGTCCATCTCCTCTaGCTTCACAGGGTAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRHMIHTPPFPEKWQNRHPVHLL*LHRVAQ Trigger: CTGCGCTACCCTGTGAAGCCAGAGGAGATGGACTGG...ATGCCTATTCTGCCATTTCTCAGGAAAGGGTGGAGTATGTATCATATGCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | ATACATACTCCACCCTTTCCTGAGAAATGGCAGAATAGGCATGTGTACACATATAGACAGGCGATGTTCTaGAAGCCACCTGCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: IHTPPFPEKWQNRHVYTYRQAMF*KPPAGA Trigger: AGCTCCTGCAGGTGGCTTCCAGAACATCGCCTGTCT...ATATGTGTACACATGCCTATTCTGCCATTTCTCAGGAAAGGGTGGAGTATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS-3UTR CCA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGACCCTTTCCTGAGAAATaGCAGAATAGGCATGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRPFPEK*QNRHVY Trigger: GTACACATGCCTATTCTGCCATTTCTCAGGAAAGGG...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS-3UTR TCA 90 bp | ATACATACTCCACCCTTTCCTGAGAAATGGCAGAATAGGCATGTGTACACATATATGGTAGAAGGCATATaGTACATACTCCACCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IHTPPFPEKWQNRHVYTYMVEGI*YILHPF Trigger: GAAAGGGTGGAGTATGTATCATATGCCTTCTACCAT...ATATGTGTACACATGCCTATTCTGCCATTTCTCAGGAAAGGGTGGAGTATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324871.12 |
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| CDS CCA 90 bp | TGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTaGGATCCTACTTTGTGTTTGTGCTTAGCGCAGCGTGTGGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: WGTSSPSPETGCLMH*DPTLCLCLAQRVVR Trigger: GCGGACCACACGCTGCGCTAAGCACAAACACAAAGTAGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS CCA 90 bp | TCCACTCTCCAGGGCAAAGGTCACAGACCCAGAGTAGAGGGTAGGTaGAGCCTCTCCATGCTGATGTCACCAGTGTCTAACAGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: STLQGKGHRPRVEGR*SLSMLMSPVSNRPP Trigger: TGGTGGCCTGTTAGACACTGGTGACATCAGCATGGAGAGGCTCCACCTACCCTCTACTCTGGGTCTGTGACCTTTGCCCTGGAGAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548681.1 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTGGCTTCACAGGGCTGCCCAACTCCACTTCTGGCGGTTGATGTGACCGATCCTACTTTGTGTTaGTGCTTAGCGCAGCGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SPLASQGCPTPLLAVDVTDPTLC*CLAQRV Trigger: CACACGCTGCGCTAAGCACAAACACAAAGTAGGATC...GGTCACATCAACCGCCAGAAGTGGAGTTGGGCAGCCCTGTGAAGCCAGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS GCA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTaGCTAATGCACTGGGATCCTACTTTGTGTTTGTGCTTAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: NCPFWGTSSPSPETG*LMHWDPTLCLCLAQ Trigger: CTGCGCTAAGCACAAACACAAAGTAGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CAA 90 bp | CCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTGGCTGATGATTCGCCACTaGTGCTTTGTCCGCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PFWGTSSPSPETGCLMHWLMIRH*CFVRLK Trigger: TTTCAAGCGGACAAAGCACAAGTGGCGAATCATCAG...CCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CAA 90 bp | AACTGCCCTTTCTGGGGCACAAGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTGGGATCCTACTTaGTGTTTGTGCTTAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: NCPFWGTSSPSPETGCLMHWDPT*CLCLAQ Trigger: CTGCGCTAAGCACAAACACAAAGTAGGATCCCAGTG...CATTAGGCAGCCAGTCTCGGGAGAAGGGGAACTTGTGCCCCAGAAAGGGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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| CDS-3UTR CAA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGAAGAGGAAGAACATCTTaGTCAGCTAACAGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRRGRTS*SANRPP Trigger: TGGTGGCCTGTTAGCTGACAAAGATGTTCTTCCTCT...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257848.7 |
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| CDS-3UTR CAA 90 bp | CCAGGATCCACAAAGCAAACAGAAGTGGTAATTGAGCCTAGCAAGCAGTTTAGACTGATGATTCGCCACTaGTGCTTTGTCCGCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PGSTKQTEVVIEPSKQFRLMIRH*CFVRLK Trigger: TTTCAAGCGGACAAAGCACAAGTGGCGAATCATCAG...TCTAAACTGCTTGCTAGGCTCAATTACCACTTCTGTTTGCTTTGTGGATCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257848.7 ENST00000324871.12 |
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| CDS CCA 72 bp | CAGGGCAAAGGTCACAGACCCAGAGTAGAGGGTAGGTaGAGCCTCTCCATGCTGATGTCACCAGTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QGKGHRPRVEGR*SLSMLMSPVSG Trigger: TCCAGACACTGGTGACATCAGCATGGAGAGGCTCCACCTACCCTCTACTCTGGGTCTGTGACCTTTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549773.1 |
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| CDS CCA 72 bp | CAGGGCAAAGGTCACAGACCCAGAGTAGAGGGTAGGTaGAGCCTCTCCATGCTGATGTCACCAGTGTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: QGKGHRPRVEGR*SLSMLMSPVSN Trigger: GTTAGACACTGGTGACATCAGCATGGAGAGGCTCCACCTACCCTCTACTCTGGGTCTGTGACCTTTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548681.1 |
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| CDS CCA 72 bp | AGTTCCCCTTCTCCCGAGACTGGCTGCCTAATGCACTaGGATCCTACTTTGTGTTTGTGCTTAGCGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: SSPSPETGCLMH*DPTLCLCLAQR Trigger: ACGCTGCGCTAAGCACAAACACAAAGTAGGATCCCAGTGCATTAGGCAGCCAGTCTCGGGAGAAGGGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553125.5 |
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