RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METRNL (Homo sapiens)

Ensembl gene IDs: ENSG00000176845, ENSG00000275031

Ensembl transcript IDs: ENST00000320095.12, ENST00000570778.5, ENST00000571814.1, ENST00000571940.1, ENST00000574053.1, ENST00000616599.2, ENST00000633735.1, ENST00000633913.1, ENST00000634158.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCGCCGGGCGGAGCAAGCGTGTCTGCCGAGGCAGGGTGGCGCCCTaGGGTACGTCCAGCGAGGCCCTGAACACGGGCCGTGGGCACCGG +
Preference number: 1 (lower is better)
Translates to: VAGRSKRVCRGRVAP*GTSSEALNTGRGHR
Trigger: CCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGACACGCTTGCTCCGCCCGGCGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp TCTGCCGAGGCAGGGTGGCGCCCTGGGGTACGTCCAGCGAGGCCCTaGACACGGGCCGTGGGCACCGGACCTGGCGAAAGACAGACTCCG +
Preference number: 1 (lower is better)
Translates to: SAEAGWRPGVRPARP*TRAVGTGPGERQTP
Trigger: CGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp CCTGCCGCCCCGCTGTGGGCTGGGCACCTGTGCTGTGGCGCCTGCTaGCAAAGGTGTGCTGACCACCAGCCACAGTGGGACCTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PAAPLWAGHLCCGAC*QRCADHQPQWDLAQ
Trigger: CTGGGCCAGGTCCCACTGTGGCTGGTGGTCAGCACACCTTTGCCAGCAGGCGCCACAGCACAGGTGCCCAGCCCACAGCGGGGCGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GGTGGCGCCCTGGGGTACGTCCAGCGAGGCCCTGAACACGGGCCGTaGGCACCGGACCTGGCGAAAGACAGACTCCGGCTTCTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: GGALGYVQRGPEHGP*APDLAKDRLRLLAG
Trigger: ACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAGGGCGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GGTACGTCCAGCGAGGCCCTGAACACGGGCCGTGGGCACCGGACCTaGCGAAAGACAGACTCCGGCTTCTGGCTGGTCGGATCCTCGTCT +
Preference number: 1 (lower is better)
Translates to: GTSSEALNTGRGHRT*RKTDSGFWLVGSSS
Trigger: AGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GATGGGGGCCGCCCTGGAGGGGAAGCAGTTGCTGTCCGGTGCAGGTaGGACAGGACCAGGCGTTCAGCGAGGACAATGCAGGCTGCGTTG +
Preference number: 1 (lower is better)
Translates to: DGGRPGGEAVAVRCR*DRTRRSARTMQAAL
Trigger: CAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGCTTCCCCTCCAGGGCGGCCCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp CCCAACCTGAGATGGCTTGACATGCCGGGGCCTCGGCCAGCCCTGTaGCGAGCTGGAAACCGAGTCACAGCTCCCATGGGGCCCAGCGTT +
Preference number: 1 (lower is better)
Translates to: PNLRWLDMPGPRPAL*RAGNRVTAPMGPSV
Trigger: AACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCCAGCTCGTCACAGGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CCCGCCACAGGCTCAGCCACACGGTGTCCAGTGCCCGGCCCTCCCTaGAGCCAGCTTTCCTTCTGGAACCGCAGGGAACCTCTGACAAAG +
Preference number: 1 (lower is better)
Translates to: PATGSATRCPVPGPP*SQLSFWNRREPLTK
Trigger: CTTTGTCAGAGGTTCCCTGCGGTTCCAGAAGGAAAGCTGGCTGCAGGGAGGGCCGGGCACTGGACACCGTGTGGCTGAGCCTGTGGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATaGAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGG +
Preference number: 1 (lower is better)
Translates to: LSGAGGTGPGVQRGQ*RLRCNPTAFLVALR
Trigger: CCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp GTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGCAGGCTaGGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGGGATGAG +
Preference number: 1 (lower is better)
Translates to: VQVGQDQAFSEDNAG*VAIRRPFWLLSGDE
Trigger: CTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GCCGTGGGCACCGGACCTGGCGAAAGACAGACTCCGGCTTCTGGCTaGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCG +
Preference number: 1 (lower is better)
Translates to: AVGTGPGERQTPASG*SDPRLYSRERKQPA
Trigger: CGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GGAGAAGCCACCGCCCCCGAGAGCTCCAAAGCCTCTGACTTGTCTTaGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGATGGGGG +
Preference number: 1 (lower is better)
Translates to: GEATAPESSKASDLS*VSLTALAAPGGRWG
Trigger: CCCCCATCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGCTTTGGAGCTCTCGGGGGCGGTGGCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTGGGCTCTaGTTGCTCTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACC +
Preference number: 1 (lower is better)
Translates to: GPAFADGGPAWSCGL*LLSASLSWPSADWT
Trigger: GGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp CCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTaGGCTCTGGTTGCTCTCAGCTTCTCTCTCATGGCCATCAGCCGA +
Preference number: 1 (lower is better)
Translates to: PMGPSVCRWGTSMEL*ALVALSFSLMAISR
Trigger: TCGGCTGATGGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GCTGGAAACCGAGTCACAGCTCCCATGGGGCCCAGCGTTTGCAGATaGGGGACCAGCATGGAGCTGTGGGCTCTGGTTGCTCTCAGCTTC +
Preference number: 1 (lower is better)
Translates to: AGNRVTAPMGPSVCR*GTSMELWALVALSF
Trigger: GAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp ACACATGTGAACACGGACCACATTCCTGCCCAACCTGAGATGGCTTaGCATGCCGGGGCCTCGGCCAGCCCTGTGACGAGCTGGAAACCG +
Preference number: 1 (lower is better)
Translates to: THVNTDHIPAQPEMA*HAGASASPVTSWKP
Trigger: CGGTTTCCAGCTCGTCACAGGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTGGGCAGGAATGTGGTCCGTGTTCACATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTGCCCGTGTaGATGTTCACGGCCGTGGGCTCCTGCAGGAGGACAGGTCCCAGA +
Preference number: 1 (lower is better)
Translates to: LDPLFFLGGHVDLPV*MFTAVGSCRRTGPR
Trigger: TCTGGGACCTGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp GCGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTaGTCTCCGGGGATGAGTTACACCCTGAGCCCCAGCCTTCTTGCC +
Preference number: 1 (lower is better)
Translates to: ARTMQAALQSDGLSG*SPGMSYTLSPSLLA
Trigger: GGCAAGAAGGCTGGGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTGGGCTCTGGTTaGTCTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAG +
Preference number: 1 (lower is better)
Translates to: QRLQMGDQHGAVGSG*SQLLSHGHQPTGPQ
Trigger: CTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp ACGGGCCGTGGGCACCGGACCTGGCGAAAGACAGACTCCGGCTTCTaGCTGGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACC +
Preference number: 1 (lower is better)
Translates to: TGRGHRTWRKTDSGF*LVGSSSLFSGTETT
Trigger: GGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp TCAGCCCCGCAGTCGGTGGTGATTTGTTCTGGTAGCCGCATCCTTTaGGGACATGGGGTCACCAACCTGGGTTCAGACCAGCTCCTGGGC +
Preference number: 1 (lower is better)
Translates to: SAPQSVVICSGSRIL*GHGVTNLGSDQLLG
Trigger: GCCCAGGAGCTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGAACAAATCACCACCGACTGCGGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATaGAGCTGTGGGCTCTGGTTGCTCTCAGCTTCTCTCTCATGGCCA +
Preference number: 1 (lower is better)
Translates to: SQLPWGPAFADGGPA*SCGLWLLSASLSWP
Trigger: TGGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp CATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: HFQSARASLAGSSWG*VWRERPQLRYQGQA
Trigger: GGCCTGACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR TCA 90 bp ACACACAGAGACACATGTGAACACGGACCACATTCCTGCCCAACCTaGGATGGCTTGACATGCCGGGGCCTCGGCCAGCCCTGTGACGAG +
Preference number: 1 (lower is better)
Translates to: THRDTCEHGPHSCPT*DGLTCRGLGQPCDE
Trigger: CTCGTCACAGGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTGGGCAGGAATGTGGTCCGTGTTCACATGTGTCTCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTaGCCGTGTGCATGTTCACGGCCGTGGGCTCCTGCAGGAGGACAG +
Preference number: 1 (lower is better)
Translates to: HSTLTLSFSSGDMWI*PCACSRPWAPAGGQ
Trigger: CTGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GAGCCCTGGAGGGAGAGGCTCTGCCCACACCGTGACTTTGGATTGTaGCCTCAGGAACTCAGAGAACGAGGTTGTTTCAGCCCCGCAGTC +
Preference number: 1 (lower is better)
Translates to: EPWRERLCPHRDFGL*PQELRERGCFSPAV
Trigger: GACTGCGGGGCTGAAACAACCTCGTTCTCTGAGTTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp ACACAGTGCTTACCCAGAGTGCCTGAGCATTTGGCAAGGCCGGCATaGTGCCCACTGACCACATCACCCTCTCCCAGGTCCCCTTTGCTC +
Preference number: 1 (lower is better)
Translates to: TQCLPRVPEHLARPA*CPLTTSPSPRSPLL
Trigger: GAGCAAAGGGGACCTGGGAGAGGGTGATGTGGTCAGTGGGCACCATGCCGGCCTTGCCAAATGCTCAGGCACTCTGGGTAAGCACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp CCCACACACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTaGATCTGCCCGTGTGCATGTTCACGGCCGTGGGCTCCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: PTHSTLTLSFSSGDM*ICPCACSRPWAPAG
Trigger: TCCTGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp CTCCACCTGACACCGGGTTCTGGCCTACCCCAGCATCCCTGTAATTaGGGAGAGGCTGCCAGCCTGAAACCCGACCTTCTTGTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: LHLTPGSGLPQHPCN*GEAASLKPDLLVLQ
Trigger: CTGCAGAACAAGAAGGTCGGGTTTCAGGCTGGCAGCCTCTCCTCAATTACAGGGATGCTGGGGTAGGCCAGAACCCGGTGTCAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CAGTGCTTACCCAGAGTGCCTGAGCATTTGGCAAGGCCGGCATGGTaGCCACTGACCACATCACCCTCTCCCAGGTCCCCTTTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: QCLPRVPEHLARPAW*PLTTSPSPRSPLLL
Trigger: TAAGAGCAAAGGGGACCTGGGAGAGGGTGATGTGGTCAGTGGGCACCATGCCGGCCTTGCCAAATGCTCAGGCACTCTGGGTAAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp GCTTCAGGTCCTCGCCCAGAAACACCTGCTTCTTGTTGTGACCTGTaGGAGCCTGCAGACCTGTGCTGGCTCAGATCTGAGCTGGTGCAC +
Preference number: 1 (lower is better)
Translates to: ASGPRPETPASCCDL*EPADLCWLRSELVH
Trigger: GTGCACCAGCTCAGATCTGAGCCAGCACAGGTCTGCAGGCTCCCACAGGTCACAACAAGAAGCAGGTGTTTCTGGGCGAGGACCTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp TTCAGCGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTaGTTGCTCTCCGGGGATGAGTTACACCCTGAGCCCCAGCCTTCT +
Preference number: 1 (lower is better)
Translates to: FSEDNAGCVAIRRPF*LLSGDELHPEPQPS
Trigger: AGAAGGCTGGGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp GAGAAGATGAAGCGTTCTCCCCTGGAGCCCTGGAGGGAGAGGCTCTaGCCACACCGTGACTTTGGATTGTGGCCTCAGGAACTCAGAGAA +
Preference number: 1 (lower is better)
Translates to: EKMKRSPLEPWRERL*PHRDFGLWPQELRE
Trigger: TTCTCTGAGTTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCAGGGCTCCAGGGGAGAACGCTTCATCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp TGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCGTaGCTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACCAAG +
Preference number: 1 (lower is better)
Translates to: CAQRPVLHPTAGQMP*LLTSLENSIRRHTK
Trigger: CTTGGTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR TCA 90 bp CTGGCCTACCCCAGCATCCCTGTAATTGAGGAGAGGCTGCCAGCCTaGAACCCGACCTTCTTGTTCTGCAGCCTTCTCCTGTCAGTCAAC +
Preference number: 1 (lower is better)
Translates to: LAYPSIPVIEERLPA*NPTFLFCSLLLSVN
Trigger: GTTGACTGACAGGAGAAGGCTGCAGAACAAGAAGGTCGGGTTTCAGGCTGGCAGCCTCTCCTCAATTACAGGGATGCTGGGGTAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 90 bp GCCTTCATGTGGAGCTCCCCAACCTTCTCTAGTAGCAAAGTCCAGTaGGCCAGGACCCCCTGCATTGGTGATGACCTAGTGAATCCAGGC +
Preference number: 1 (lower is better)
Translates to: AFMWSSPTFSSSKVQ*ARTPCIGDDLVNPG
Trigger: GCCTGGATTCACTAGGTCATCACCAATGCAGGGGGTCCTGGCTCACTGGACTTTGCTACTAGAGAAGGTTGGGGAGCTCCACATGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 90 bp CATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTaGCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCGTG +
Preference number: 1 (lower is better)
Translates to: HENNNSEWHLFTHPL*PTASASPNRRPDAV
Trigger: CACGGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR GCA 90 bp CCACCAGGAACCGCTGAGTGTGACCTTATTTGGAAATGGGGTCTTTaGGGACGTAATCGGTTTAAGACGAGGTCACTGGTGTGGGCCCCA +
Preference number: 1 (lower is better)
Translates to: PPGTAECDLIWKWGL*GRNRFKTRSLVWAP
Trigger: TGGGGCCCACACCAGTGACCTCGTCTTAAACCGATTACGTCCGCAAAGACCCCATTTCCAAATAAGGTCACACTCAGCGGTTCCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 90 bp AGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCG +
Preference number: 1 (lower is better)
Translates to: SLHFTAFPIGQGILG*KLMGLSVARTSTAS
Trigger: CGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR CCA 90 bp ATTATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATaGCACCTTTTCACACATCCACTGTGCCCAACGGCCAGTGCTTCA +
Preference number: 1 (lower is better)
Translates to: IIWLQNFRHENNNSE*HLFTHPLCPTASAS
Trigger: TGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR-3UTR CCA 90 bp AGCAGATGGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCTGGGGTGCCAGGCGCCGGGCTGCAGGCCTaGCTCAAAACCCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: SRWKPSGLGAAFTPGVPGAGLQA*LKTHLP
Trigger: GGGGAGGTGGGTTTTGAGCCAGGCCTGCAGCCCGGC...GCCTGGCACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCATCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR TCA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTAACCCACCTCCCCTGTaGAGCCCGCCTCAACCCTCA +
Preference number: 2 (lower is better)
Translates to: SQLPWGPAFADGGPAWSCNPPPL*SPPQPS
Trigger: TGAGGGTTGAGGCGGGCTTCACAGGGGAGGTGGGTT...ACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp GTGACGAGCTGGAAACCGAGTCACAGCTCCCATGGGGCCCAGCGTTaGCAGATGGGGGACCAGCATGGAGCTGTGGGCTCTGGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: VTSWKPSHSSHGAQR*QMGDQHGAVGSGCS
Trigger: AGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCCAGCTCGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR TCA 90 bp AGCAGATGGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCTGGGGTGCCAGGCGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 2 (lower is better)
Translates to: SRWKPSGLGAAFTPGVPGGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...GCCTGGCACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCATCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR GCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTACCACCCACCCTGGCCTaGCCAGGTCAGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVPPTLA*PGQMPP
Trigger: TGGGGGCATCTGACCTGGGCAGGCCAGGGTGGGTGG...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp CTCCTGGGAGAAGCCACCGCCCCCGAGAGCTCCAAAGCCTCTGACTaGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGA +
Preference number: 2 (lower is better)
Translates to: LLGEATAPESSKASD*SWVSLTALAAPGGR
Trigger: TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGCTTTGGAGCTCTCGGGGGCGGTGGCTTCTCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp CCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTGGGCTCTGGTaGCTCTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCA +
Preference number: 2 (lower is better)
Translates to: PAFADGGPAWSCGLW*LSASLSWPSADWTP
Trigger: TGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTACCTGAACACGGGCCGTaGGCACCGGACCTGGCGAAA +
Preference number: 2 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVPEHGP*APDLAK
Trigger: TTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGG...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp GCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: AFPIGQGILGWKLMG*SVARTSTASVPGSG
Trigger: GCCTGACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR CAA 90 bp CTGGAGCCCTGGAGGGAGAGGCTCTGCCCACACCGTGACTTTGGATaGTGGCCTCAGGAACTCAGAGAACGAGGTTGTTTCAGCCCCGCA +
Preference number: 2 (lower is better)
Translates to: LEPWRERLCPHRDFG*WPQELRERGCFSPA
Trigger: TGCGGGGCTGAAACAACCTCGTTCTCTGAGTTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCAGGGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp CTCCCCTGGAGCCCTGGAGGGAGAGGCTCTGCCCACACCGTGACTTaGGATTGTGGCCTCAGGAACTCAGAGAACGAGGTTGTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: LPWSPGGRGSAHTVT*DCGLRNSENEVVSA
Trigger: GGCTGAAACAACCTCGTTCTCTGAGTTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCAGGGCTCCAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp AGCGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTaGCTCTCCGGGGATGAGTTACACCCTGAGCCCCAGCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SEDNAGCVAIRRPFW*LSGDELHPEPQPSC
Trigger: GCAAGAAGGCTGGGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 90 bp AGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGCAGGCTGCGTaGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGGGATGAGTTAC +
Preference number: 2 (lower is better)
Translates to: RWDRTRRSARTMQAA*QSDGLSGCSPGMSY
Trigger: GTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CCA 90 bp ACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 2 (lower is better)
Translates to: THPLCPTASASPNRRPDAQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...GGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR-3UTR CCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAGCATGTTCACGGCCGTaGGCTCCTGCAGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRACSRP*APAGGQ
Trigger: CTGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGC...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR TCA 90 bp CGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGACCTGCTTCTTGTTGTaGCCTGTGGGAGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RGQCRLRCNPTAFLVALRTCFLL*PVGACR
Trigger: TCTGCAGGCTCCCACAGGTCACAACAAGAAGCAGGT...CCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAGATGCCCCCAGCAGATaGAAACCCTCAGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRDAPSR*KPSGLG
Trigger: ACCCAGCCCTGAGGGTTTCCATCTGCTGGGGGCATC...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR GCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTGTGCCCAACGGCCAGTaGTTCACCCAACCGCAGGCC +
Preference number: 2 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFVPNGQ*FTQPQA
Trigger: GGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCAC...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR-3UTR GCA 90 bp TCGGGGGACATGTGGATCTGCCCGTGTGCATGTTCACGGCCGTGGGCTCCTGCACTGTTTGGTAAGCTTTaGCTTCCCCTAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: SGDMWICPCACSRPWAPALFGKL*LPLDSG
Trigger: TCCAGAGTCTAGGGGAAGGCAAAGCTTACCAAACAG...TGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR GCA 90 bp ACCCACACACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTGCTGCACGGGAGGAACTaGCTGATTCATCAATGGGGA +
Preference number: 2 (lower is better)
Translates to: THTLNLDPLFFLGGHVDLLHGRN*LIHQWG
Trigger: TCCCCATTGATGAATCAGGCAGTTCCTCCCGTGCAG...CAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTAGAGTGTGACCTTATTTaGAAATGGGGTCTTTGCGGA +
Preference number: 2 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVECDLI*KWGLCG
Trigger: TCCGCAAAGACCCCATTTCCAAATAAGGTCACACTC...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp GCAGGGTGGCGCCCTGGGGTACGTCCAGCGAGGCCCTaGACACGGGCCGTGGGCACCGGACCTGGCGAAAGA +
Preference number: 3 (lower is better)
Translates to: AGWRPGVRPARP*TRAVGTGPGER
Trigger: TCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CGAGAACGTCCACAGCTTCGGTACCAGGGTCAGGCCTaGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCT +
Preference number: 3 (lower is better)
Translates to: RERPQLRYQGQA*AQGMRLPARGP
Trigger: AGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTGGTACCGAAGCTGTGGACGTTCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
3UTR CCA 72 bp CGGAGCAAGCGTGTCTGCCGAGGCAGGGTGGCGCCCTaGGGTACGTCCAGCGAGGCCCTGAACACGGGCCGT +
Preference number: 3 (lower is better)
Translates to: RSKRVCRGRVAP*GTSSEALNTGR
Trigger: ACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGACACGCTTGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp GAGCTGAGCAGGCAGCTGGACCTCACAGCCCTGTCCTaGCCCAGCGGAGAGACGAGGCCCCAGTCCCCCACC +
Preference number: 3 (lower is better)
Translates to: ELSRQLDLTALS*PSGETRPQSPT
Trigger: GGTGGGGGACTGGGGCCTCGTCTCTCCGCTGGGCCAGGACAGGGCTGTGAGGTCCAGCTGCCTGCTCAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp CAGCCCCCGCCACAGGCTCAGCCACACGGTGTCCAGTaGCCGGCCCTCCCTGCAGCCAGCTTTCCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: QPPPQAQPHGVQ*PALPAASFPSG
Trigger: TCCAGAAGGAAAGCTGGCTGCAGGGAGGGCCGGGCACTGGACACCGTGTGGCTGAGCCTGTGGCGGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp AGCGAGGCCCTGAACACGGGCCGTGGGCACCGGACCTaGCGAAAGACAGACTCCGGCTTCTGGCTGGTCGGA +
Preference number: 3 (lower is better)
Translates to: SEALNTGRGHRT*RKTDSGFWLVG
Trigger: TCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CTGGGGTACGTCCAGCGAGGCCCTGAACACGGGCCGTaGGCACCGGACCTGGCGAAAGACAGACTCCGGCTT +
Preference number: 3 (lower is better)
Translates to: LGYVQRGPEHGP*APDLAKDRLRL
Trigger: AAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACGTACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CCGCTGTGGGCTGGGCACCTGTGCTGTGGCGCCTGCTaGCAAAGGTGTGCTGACCACCAGCCACAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: PLWAGHLCCGAC*QRCADHQPQWD
Trigger: GTCCCACTGTGGCTGGTGGTCAGCACACCTTTGCCAGCAGGCGCCACAGCACAGGTGCCCAGCCCACAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp CAAGCGTGTCTGCCGAGGCAGGGTGGCGCCCTGGGGTACGTCCAGCGAGGCCCTTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 3 (lower is better)
Translates to: QACLPRQGGALGYVQRGPWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...AGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGACACGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp ATGTGGAGGGAGTCGAGGTCGAGGGAGGATGAGGGGTaGGCCAGGACTGTCCCTGCCACCCCAGCGTCCCAG +
Preference number: 3 (lower is better)
Translates to: MWRESRSREDEG*ARTVPATPASQ
Trigger: CTGGGACGCTGGGGTGGCAGGGACAGTCCTGGCTCACCCCTCATCCTCCCTCGACCTCGACTCCCTCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp AGATGGCTTGACATGCCGGGGCCTCGGCCAGCCCTGTaGCGAGCTGGAAACCGAGTCACAGCTCCCATGGGG +
Preference number: 3 (lower is better)
Translates to: RWLDMPGPRPAL*RAGNRVTAPMG
Trigger: CCCCATGGGAGCTGTGACTCGGTTTCCAGCTCGTCACAGGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp GATCTGCCCGTGTGCATGTTCACGGCCGTGGGCTCCTaGAGGAGGACAGGTCCCAGAGCTGAGCAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: DLPVCMFTAVGS*RRTGPRAEQAA
Trigger: AGCTGCCTGCTCAGCTCTGGGACCTGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CACCCTGGCCTGCCCAGGTCAGATGCCCCCAGCAGATaGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCT +
Preference number: 3 (lower is better)
Translates to: HPGLPRSDAPSR*KPSGLGAAFTP
Trigger: AGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCATCTGCTGGGGGCATCTGACCTGGGCAGGCCAGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp AACACGGACCACATTCCTGCCCAACCTGAGATGGCTTaGCATGCCGGGGCCTCGGCCAGCCCTGTGACGAGC +
Preference number: 3 (lower is better)
Translates to: NTDHIPAQPEMA*HAGASASPVTS
Trigger: GCTCGTCACAGGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTGGGCAGGAATGTGGTCCGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp CCCAGAGTGCCTGAGCATTTGGCAAGGCCGGCATGGTaGCCACTGACCACATCACCCTCTCCCAGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: PRVPEHLARPAW*PLTTSPSPRSP
Trigger: AGGGGACCTGGGAGAGGGTGATGTGGTCAGTGGGCACCATGCCGGCCTTGCCAAATGCTCAGGCACTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp GGAAACCGAGTCACAGCTCCCATGGGGCCCAGCGTTTaGAGATGGGGGACCAGCATGGAGCTGTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: GNRVTAPMGPSV*RWGTSMELWAL
Trigger: CAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CGAGTCACAGCTCCCATGGGGCCCAGCGTTTGCAGATaGGGGACCAGCATGGAGCTGTGGGCTCTGGTTGCT +
Preference number: 3 (lower is better)
Translates to: RVTAPMGPSVCR*GTSMELWALVA
Trigger: AGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CCCTGTGACGAGCTGGAAACCGAGTCACAGCTCCCATaGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGG +
Preference number: 3 (lower is better)
Translates to: PCDELETESQLP*GPAFADGGPAW
Trigger: CCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCCAGCTCGTCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp GACACATGTGAACACGGACCACATTCCTGCCCAACCTaGGATGGCTTGACATGCCGGGGCCTCGGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: DTCEHGPHSCPT*DGLTCRGLGQP
Trigger: GGGCTGGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTGGGCAGGAATGTGGTCCGTGTTCACATGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp GGACCAGGCGTTCAGCGAGGACAATGCAGGCTGCGTTaGAATCCGACGGCCTTTCTGGTTGCTCTCCGGGGA +
Preference number: 3 (lower is better)
Translates to: GPGVQRGQCRLR*NPTAFLVALRG
Trigger: TCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATaGAGCTGTGGGCTCTGGTTGCTCTCAGCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: PWGPAFADGGPA*SCGLWLLSASL
Trigger: GAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp TCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCACAGCTTCGGTACCAG +
Preference number: 3 (lower is better)
Translates to: SARASLAGSSWG*VWRERPQLRYQ
Trigger: CTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR GCA 72 bp AAGCGTTCTCCCCTGGAGCCCTGGAGGGAGAGGCTCTaGCCACACCGTGACTTTGGATTGTGGCCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: KRSPLEPWRERL*PHRDFGLWPQE
Trigger: TTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCAGGGCTCCAGGGGAGAACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp CTCTTTTTCCTCGGGGGACATGTGGATCTGCCCGTGTaGATGTTCACGGCCGTGGGCTCCTGCAGGAGGACA +
Preference number: 3 (lower is better)
Translates to: LFFLGGHVDLPV*MFTAVGSCRRT
Trigger: TGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp ATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTaGTCTCCGGGGATGAGTTACACCCTGAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: MQAALQSDGLSG*SPGMSYTLSPS
Trigger: GCTGGGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp GGACAGGACCAGGCGTTCAGCGAGGACAATGCAGGCTaGGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: GQDQAFSEDNAG*VAIRRPFWLLS
Trigger: GGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp GCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATaGAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: AGGTGPGVQRGQ*RLRCNPTAFLV
Trigger: AACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp GGGCACCGGACCTGGCGAAAGACAGACTCCGGCTTCTaGCTGGTCGGATCCTCGTCTTTATTCTCGGGAACG +
Preference number: 3 (lower is better)
Translates to: GHRTWRKTDSGF*LVGSSSLFSGT
Trigger: CGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp CCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTaGGCTCTGGTTGCTCTCAGCTTCTCTCTCATGGCC +
Preference number: 3 (lower is better)
Translates to: PSVCRWGTSMEL*ALVALSFSLMA
Trigger: GGCCATGAGAGAGAAGCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp CAGAAGCCTCCCGTGAAGCGTGACTTCTACTCCACCTaGCACCGGGTTCTGGCCTACCCCAGCATCCCTGTA +
Preference number: 3 (lower is better)
Translates to: QKPPVKRDFYST*HRVLAYPSIPV
Trigger: TACAGGGATGCTGGGGTAGGCCAGAACCCGGTGTCAGGTGGAGTAGAAGTCACGCTTCACGGGAGGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp TTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTaGCCGTGTGCATGTTCACGGCCGTGGGCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: LTLSFSSGDMWI*PCACSRPWAPA
Trigger: TGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp ATGGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCTaGGGTGCCAGGCAGGGTCATGATATCAAGTCCCCA +
Preference number: 3 (lower is better)
Translates to: METLRAGCSIHP*GARQGHDIKSP
Trigger: TGGGGACTTGATATCATGACCCTGCCTGGCACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp GACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTaGTTGCTCTCCGGGGATGAGTTACACCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: DNAGCVAIRRPF*LLSGDELHPEP
Trigger: GGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp AGCAGATGGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCTGGGGTGCCAGGCGTGGACACTTTCTGTTaGGTAAGCTTTGCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: SRWKPSGLGAAFTPGVPGVDTFC*VSFAFP
Trigger: GGGGAAGGCAAAGCTTACCAAACAGAAAGTGTCCAC...GCCTGGCACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp GCAGTTGCTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGCCCACACACTCAACCTaGACCCTCTCTTTTTCCTCG +
Preference number: 3 (lower is better)
Translates to: AVAVRCRWDRTRRSARTMPTHST*TLSFSS
Trigger: CGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGG...CATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp CCCTTTGCTCTTAGCGGCTGCACGGGAGGAACTGCCTaGTTCATCAATGGGGATGCAGGCTGGGGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: PFALSGCTGGTA*FINGDAGWGLV
Trigger: AACCAGACCCCAGCCTGCATCCCCATTGATGAATCAGGCAGTTCCTCCCGTGCAGCCGCTAAGAGCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp ACACCGGGTTCTGGCCTACCCCAGCATCCCTGTAATTaGGGAGAGGCTGCCAGCCTGAAACCCGACCTTCTT +
Preference number: 3 (lower is better)
Translates to: TPGSGLPQHPCN*GEAASLKPDLL
Trigger: AAGAAGGTCGGGTTTCAGGCTGGCAGCCTCTCCTCAATTACAGGGATGCTGGGGTAGGCCAGAACCCGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp TCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTaGATCTGCCCGTGTGCATGTTCACGGCCGTGGGCT +
Preference number: 3 (lower is better)
Translates to: STLTLSFSSGDM*ICPCACSRPWA
Trigger: AGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp CGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 3 (lower is better)
Translates to: RILVFILGNGNNRRPEKDWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...GTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR-3UTR CAA 90 bp AGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACTCGGCCAGGGCATCCTaGGCTGGAAGCTCATGGGGT +
Preference number: 3 (lower is better)
Translates to: RPDAVTPNVFREQYQTAHSARAS*AGSSWG
Trigger: ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA...GTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR TCA 72 bp CGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCGTaGCTCCTAACGTCTTTAGAGAACAGTATCAGACGG +
Preference number: 3 (lower is better)
Translates to: RPVLHPTAGQMP*LLTSLENSIRR
Trigger: CCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR TCA 72 bp CCCAGCATCCCTGTAATTGAGGAGAGGCTGCCAGCCTaGAACCCGACCTTCTTGTTCTGCAGCCTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: PSIPVIEERLPA*NPTFLFCSLLL
Trigger: CAGGAGAAGGCTGCAGAACAAGAAGGTCGGGTTTCAGGCTGGCAGCCTCTCCTCAATTACAGGGATGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp ACCGGACCTGGCGAAAGACAGACTCCGGCTTCTGGCTaGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAA +
Preference number: 3 (lower is better)
Translates to: TGPGERQTPASG*SDPRLYSRERK
Trigger: TTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGTCTTTCGCCAGGTCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CCA 72 bp GTCTGGTTAACTGACACTCCCAGGGACCCCCTGTGCTaGGGCATGGTGTACCCCAAATTTCATGTCCACCAG +
Preference number: 3 (lower is better)
Translates to: VWLTDTPRDPLC*GMVYPKFHVHQ
Trigger: CTGGTGGACATGAAATTTGGGGTACACCATGCCCCAGCACAGGGGGTCCCTGGGAGTGTCAGTTAACCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp CAGAGAACGAGGTTGTTTCAGCCCCGCAGTCGGTGGTaGTTTGTTCTGGTAGCCGCATCCTTTGGGGACATG +
Preference number: 3 (lower is better)
Translates to: QRTRLFQPRSRW*FVLVAASFGDM
Trigger: CATGTCCCCAAAGGATGCGGCTACCAGAACAAATCACCACCGACTGCGGGGCTGAAACAACCTCGTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR TCA 72 bp TGGAGCTCCCCAACCTTCTCTAGTAGCAAAGTCCAGTaGGCCAGGACCCCCTGCATTGGTGATGACCTAGTG +
Preference number: 3 (lower is better)
Translates to: WSSPTFSSSKVQ*ARTPCIGDDLV
Trigger: CACTAGGTCATCACCAATGCAGGGGGTCCTGGCTCACTGGACTTTGCTACTAGAGAAGGTTGGGGAGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR GCA 72 bp AACAACTCTGAATGGCACCTTTTCACACATCCACTGTaGCCAACGGCCAGTGCTTCACCCAACCGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: NNSEWHLFTHPL*PTASASPNRRP
Trigger: TGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
3UTR CCA 72 bp TTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCC +
Preference number: 3 (lower is better)
Translates to: FTAFPIGQGILG*KLMGLSVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR GCA 72 bp ACCGCTGAGTGTGACCTTATTTGGAAATGGGGTCTTTaGGGACGTAATCGGTTTAAGACGAGGTCACTGGTG +
Preference number: 3 (lower is better)
Translates to: TAECDLIWKWGL*GRNRFKTRSLV
Trigger: CACCAGTGACCTCGTCTTAAACCGATTACGTCCGCAAAGACCCCATTTCCAAATAAGGTCACACTCAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGATTAAGACACGGGAATTaGTTTCCTATGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRLRHGN*FPMDIS
Trigger: AGAAATGTCCATAGGAAACAAATTCCCGTGTCTTAA...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR-3UTR CAA 90 bp CTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATTTAAGACACGGGAATTaGTTTCCTATGGACATTTCT +
Preference number: 3 (lower is better)
Translates to: LQNFRHENNNSEWHLFTHLRHGN*FPMDIS
Trigger: AGAAATGTCCATAGGAAACAAATTCCCGTGTCTTAA...ATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCTGCCGGCCACAGGTaGCACACGGACCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ACGSQRAALTARPHQDRSAAGHR*HTDPCP
Trigger: CGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGC...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGTPAAS*RAPASG
Trigger: GCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGT...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTATPAAS*RAPASG
Trigger: GCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGT...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPTPAAS*RAPASG
Trigger: GCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGT...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGATTCCTGTGTGCCTCGTaGGTCAGCCCGCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGFLCAS*VSPPAA
Trigger: CGCGGCCGGCGGGCTGACGCACGAGGCACACAGGAA...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570778.5
ENST00000616599.2
CDS-3UTR CCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCAGCTGCACCGGTCGCTaGAGTACTGCGCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRSCTGR*STARPR
Trigger: GCGCGGGCGCGCAGTACTCCAGCGACCGGTGCAGCT...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCACACCAAGAGCCATGGTaGGGCGGGGCCGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPHQEPW*GGAELP
Trigger: CGGGAGCTCGGCCCCGCCCCACCATGGCTCTTGGTG...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCACACCAAGAGCCATGGTaGGGCGGGGCCGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAHQEPW*GGAELP
Trigger: CGGGAGCTCGGCCCCGCCCCACCATGGCTCTTGGTG...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCCCTGCAGCCGGACTCTaGCCCCTCAGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTPAAGL*PLSRAS
Trigger: GGAGGCCCTGCTGAGGGGCCAGAGTCCGGCTGCAGG...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGATCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCATCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGCGCAGACAGCTCGTaGAGGTCCGACGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPGADSS*RSDALC
Trigger: GCACAGGGCGTCGGACCTGCACGAGCTGTCTGCGCC...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCACCTCGGTGTCACTaGAGGGACGGCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTAPRCH*RDGTAQ
Trigger: CTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGC...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAGCACCTCGGTGTCACTaGAGGGACGGCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGAPRCH*RDGTAQ
Trigger: CTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGC...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCACGGGAGTGCAGGCGGTaGTTGTCCCCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPRECRR*LSPGPP
Trigger: TGGAGGGCCTGGGGACAAGCACCGCCTGCACTCCCG...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTGCACCAAGAGCCATaGTGGGGCGGGGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDLHQEP*WGGAEL
Trigger: GAGCTCGGCCCCGCCCCACCATGGCTCTTGGTGCAG...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCTGCACCAAGAGCCATaGTGGGGCGGGGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRLHQEP*WGGAEL
Trigger: GAGCTCGGCCCCGCCCCACCATGGCTCTTGGTGCAG...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGCCGGGCTGCAGGCCTaGCTCAAAACCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHAGLQA*LKTHLP
Trigger: GGGGAGGTGGGTTTTGAGCCAGGCCTGCAGCCCGGC...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACTGCTCTTGCAGCACCTaGGGGACGATGGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHCSCST*GTMGAA
Trigger: GGCGGCCCCCATCGTCCCCCAGGTGCTGCAAGAGCA...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCCTCGGCCAGCCCTGTaGCGAGCTGGAAACCGAGTC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDPRPAL*RAGNRV
Trigger: GACTCGGTTTCCAGCTCGTCACAGGGCTGGCCGAGG...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: ACGSQRAALTARPHQDRSRPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQRPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCACGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPRPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACAC +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTKRKSP*PGRTPH
Trigger: GTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTT...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACAC +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRKRKSP*PGRTPH
Trigger: GTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTT...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACAC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHKRKSP*PGRTPH
Trigger: GTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTT...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTGCCCAACGGCCAGTaGTTCACCCAACCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHVPNGQ*FTQPQA
Trigger: GGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCAC...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCCCAGCCCCAGCCTGCTaGTTCAGGTCCTCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTPAPAC*FRSSPR
Trigger: TCTGGGCGAGGACCTGAAGCAGCAGGCTGGGGCTGG...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCGTGCCCGGCCCTCCCTaGAGCCAGCTTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRVPGPP*SQLSFW
Trigger: CCAGAAGGAAAGCTGGCTGCAGGGAGGGCCGGGCAC...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCCACACGGTGTCCAGTaGCCGGCCCTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTPHGVQ*PALPAA
Trigger: GGCTGCAGGGAGGGCCGGGCACTGGACACCGTGTGG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGTATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQYPAAA*PPRTGR
Trigger: GCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATA...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACTATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHYPAAA*PPRTGR
Trigger: GCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATA...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCTATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRYPAAA*PPRTGR
Trigger: GCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATA...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCACTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACCCTGAACACGGGCCGTaGGCACCGGACCTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHPEHGP*APDLAK
Trigger: TTTCGCCAGGTCCGGTGCCCACGGCCCGTGTTCAGG...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCAACCCTGGTTCCAGATaGCCACGAGGGCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRNPGSR*PRGLGR
Trigger: GCGTCCCAGCCCTCGTGGTCATCTGGAACCAGGGTT...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGAGGTCGAGGGAGGATaGGGGGTGAGCCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDEVEGG*GVSQDC
Trigger: ACAGTCCTGGCTCACCCCTCATCCTCCCTCGACCTC...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCCGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: ACGSQRAALTARPHQDRSRRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGGAGGAGCCCTGGGATaGAACCTGCCCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTGGALG*NLPREQ
Trigger: CTGCTCTCTGGGCAGGTTGCATCCCAGGGCTCCTCC...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGGAGGAGCCCTGGGATaGAACCTGCCCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDGGALG*NLPREQ
Trigger: CTGCTCTCTGGGCAGGTTGCATCCCAGGGCTCCTCC...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTTCCTGTGTGCCTCGTaGGTCAGCCCGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTFLCAS*VSPLQR
Trigger: CCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAA...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGTCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARSRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCTCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRSRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCATCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTASRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGGTCCCTGAATCAGGGTaGCTGGAGGTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQVPESG*LEVLGQ
Trigger: CTGCCCCAGCACCTCCAGCCACCCTGATTCAGGGAC...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTCCCTGAATCAGGGTaGCTGGAGGTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHVPESG*LEVLGQ
Trigger: CTGCCCCAGCACCTCCAGCCACCCTGATTCAGGGAC...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCCAGGGAGAAGCCGTGTaGCCACGGAGGCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: ACGSQRAALTARPHQDRSQGEAV*PRRQRL
Trigger: CAGTCTCTGCCTCCGTGGCCACACGGCTTCTCCCTG...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCTCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTASSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGTCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGTGCTGGCTCAGATCTaGGCTGGTGCACACCTGAGC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDVLAQI*AGAHLS
Trigger: GCTCAGGTGTGCACCAGCTCAGATCTGAGCCAGCAC...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGAGGTCCGACGCCCTGTaGCTCCTAACCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTRSDAL*LLTSSY
Trigger: GTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAAGGTCCGACGCCCTGTaGCTCCTAACCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGRSDAL*LLTSSY
Trigger: GTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAAGGTCCGACGCCCTGTaGCTCCTAACCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPRSDAL*LLTSSY
Trigger: GTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGTGGATGGCTGAGTCCTaGCGCTCAGGCTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARWMAES*RSGSWV
Trigger: TACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCA...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTGGATGGCTGAGTCCTaGCGCTCAGGCTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTWMAES*RSGSWV
Trigger: TACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCA...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCGTGCGTCAGCCCGCTaGAGAGGAGAGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARRASAR*RGETLS
Trigger: TGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACG...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGTGCGTCAGCCCGCTaGAGAGGAGAGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGRASAR*RGETLS
Trigger: TGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACG...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCACCTCCTTCCTGTGTaGCTCGTGCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTHLLPV*LVRQPA
Trigger: GGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570778.5
ENST00000616599.2
CDS-3UTR GCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGAGCCCCAGCCTTCTTaGCTTCATGTGGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHEPQPS*LHVELP
Trigger: GGGGAGCTCCACATGAAGGCAAGAAGGCTGGGGCTC...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGAGTGCCTGAGCATTTaGCAAGGCCGGCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAECLSI*QGRHGA
Trigger: GGCACCATGCCGGCCTTGCCAAATGCTCAGGCACTC...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARSACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTASACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRSACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDSACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGGGGCCCCACCACGTGTaGAGGAGGAGCCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEGPHHV*RRSPGM
Trigger: CATCCCAGGGCTCCTCCTTCACACGTGGTGGGGCCC...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCCCCACAGAGAGTCAGTaGGGACGATACCCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRPTESQ*GRYPLQ
Trigger: TTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGGG...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGCCCACAGAGAGTCAGTaGGGACGATACCCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTPTESQ*GRYPLQ
Trigger: TTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGGG...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGGCCTCCCGTGAAGCGTaGCTTCTACTCCACCTGACA +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQASREA*LLLHLT
Trigger: TGTCAGGTGGAGTAGAAGTCACGCTTCACGGGAGGC...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCACCTCCTTCCTGTGTaGCTCGTGCGTCAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTHLLPV*LVRQPA
Trigger: AGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCATCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTASADRV*SRAGGW
Trigger: CCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGA...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTSADRV*SRAGGW
Trigger: CCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGA...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGCTGCCGGCCACAGGTaGCACACGGACCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKAAGHR*HTDPCP
Trigger: CGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGC...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAGCTGCACCGGTCGCTaGAGTACTGCGCGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERSCTGR*STARPR
Trigger: GCGCGGGCGCGCAGTACTCCAGCGACCGGTGCAGCT...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGCGTACTGGAAGCCTGTaGTCCTCCGGCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTRTGSL*SSGRYP
Trigger: AGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGTACTGGAAGCCTGTaGTCCTCCGGCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQRTGSL*SSGRYP
Trigger: AGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRLTSSY*KPVVLR
Trigger: CCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAG...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHLTSSY*KPVVLR
Trigger: CCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAG...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARLTSSY*KPVVLR
Trigger: CCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAG...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCG +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTSWVTC*MEPRTA
Trigger: CGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCG +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQSWVTC*MEPRTA
Trigger: CGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGATCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCG +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGSWVTC*MEPRTA
Trigger: CGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTSWVTC*MEPRTA
Trigger: CGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGAGGTAAAGCGAAGGTaGGGCCCCACCACGTGTGAA +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPEVKRR*GPTTCE
Trigger: TTCACACGTGGTGGGGCCCCACCTTCGCTTTACCTC...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGGATGACCACGAGGGCTaGGACGCTAGAGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQDDHEG*DARGKA
Trigger: CGCTTTACCTCTAGCGTCCCAGCCCTCGTGGTCATC...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCGATGACCACGAGGGCTaGGACGCTAGAGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRDDHEG*DARGKA
Trigger: CGCTTTACCTCTAGCGTCCCAGCCCTCGTGGTCATC...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCATGGGGTCACCAACCTaGGTTCAGACCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTMGSPT*VQTSSW
Trigger: CCAGGAGCTGGTCTGAACCCAGGTTGGTGACCCCAT...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGTPAAS*RAPASG
Trigger: GCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGT...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGCAGGCCAGATGCCGTaGCTCCTAACGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: WAQGMRLPARGPHRTAPPAGQMP*LLTSLE
Trigger: CTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGC...TGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCACCTGCTTCTTGTTGTaGCCTGTGGGAGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTTCFLL*PVGACR
Trigger: TCTGCAGGCTCCCACAGGTCACAACAAGAAGCAGGT...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCCAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACCAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQERPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGGCGCAGACAGCTCGTaGAGGTCCGACGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEGADSS*RSDALC
Trigger: GCACAGGGCGTCGGACCTGCACGAGCTGTCTGCGCC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCAGTCTGCGCCTCTGCTaGCGTAGCGTCAAACACCAA +
Preference number: 4 (lower is better)
Translates to: ACGSQRAALTARPHQDRSSLRLC*RSVKHQ
Trigger: TTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACT...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGAAGAGTCTGCGCCTCTaGTGCCGTAGCGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTKSLRL*CRSVKH
Trigger: GTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTT...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCAAGAGTCTGCGCCTCTaGTGCCGTAGCGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRKSLRL*CRSVKH
Trigger: GTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTT...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGTTCCTGTGTGCCTCGTaGGTCAGCCCGCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKFLCAS*VSPPAA
Trigger: CGCGGCCGGCGGGCTGACGCACGAGGCACACAGGAA...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570778.5
ENST00000616599.2
CDS-3UTR GCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACTTGGGTAAGTCTCACTaGTCTTGCAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHLGKSH*SCSTWG
Trigger: CCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAA...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTGCCCTCAGTGTCAGCTaGAGTGCTAATGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTALSVS*SANEGP
Trigger: GGGCCCCTCATTAGCACTGCAGCTGACACTGAGGGC...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCGATGAGAGCACCTGTTaGGTACATCCACTCCACGGC +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRDESTC*VHPLHG
Trigger: GCCGTGGAGTGGATGTACCCAACAGGTGCTCTCATC...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VRPGPRACGSQRAALTARQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACATGCAGGCTGGGGTCTaGTTAACTGACACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHMQAGV*LTDTPR
Trigger: CCTGGGAGTGTCAGTTAACCAGACCCCAGCCTGCAT...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTSACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TCGGGGGACATGTGGATCTGCCCGTGTGCATGTTCACGGCCGTGGGCTCCTGCATGCAGCAGCAGGCGCTaGGGGACAGTCGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SGDMWICPCACSRPWAPACSSRR*GTVAGR
Trigger: CCGCCCGGCGACTGTCCCTCAGCGCCTGCTGCTGCA...TGCAGGAGCCCACGGCCGTGAACATGCACACGGGCAGATCCACATGTCCCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGACGGGAGGAACTGCCTaGTTCATCAATGGGGATGCA +
Preference number: 4 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTTGGTA*FINGDA
Trigger: TGCATCCCCATTGATGAATCAGGCAGTTCCTCCCGT...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCTCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGERPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERRPISC*GVASTN
Trigger: GTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQERRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTSADRV*SRAGGW
Trigger: CCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGA...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGTGCCCAACGGCCAGTaGTTCACCCAACCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEVPNGQ*FTQPQA
Trigger: GGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCAC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTTCACACATCCACTGTaGCCAACGGCCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTFTHPL*PTASAS
Trigger: TGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAA...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTTCCTTCCAGTGCACCTaGACCAAGAGCCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTSFQCT*TKSHGG
Trigger: CCCACCATGGCTCTTGGTGCAGGTGCACTGGAAGGA...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCACCTCCTTCCTGTGTaGCTCGTGCGTCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERHLLPV*LVRQPA
Trigger: GGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570778.5
ENST00000616599.2
CDS-3UTR CCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSYPAAA*PPRTGR
Trigger: GCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCG +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTSWVTC*MEPRTA
Trigger: CGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGTCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQESRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCACTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACTCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCTCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCCCCAGGGAAGGGATaGATTCCTCCAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: PGHAAPSARPSPHGPTRTAPGKG*IPPEYH
Trigger: GTGATATTCTGGAGGAATCCATCCCTTCCCTGGGGC...GGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCACGATGGGGGCCGCCCTaGAGGGGAAGCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSRWGPP*RGSSCC
Trigger: ACAGCAACTGCTTCCCCTCCAGGGCGGCCCCCATCG...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCACGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSRRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERRRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGTGGATGGCTGAGTCCTaGCGCTCAGGCTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEWMAES*RSGSWV
Trigger: TACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCA...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGTTCCTGTGTGCCTCGTaGGTCAGCCCGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEFLCAS*VSPLQR
Trigger: CCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAA...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCACCACAGGGCAGGACCTaGATTAATGGAAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTAPQGRT*INGNAA
Trigger: TGCTGCATTTCCATTAATGCAGGTCCTGCCCTGTGG...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCAAGGCCGGCATGGTaGCCACTGACCACATCACCC +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEARPAW*PLTTSP
Trigger: GGGTGATGTGGTCAGTGGGCACCATGCCGGCCTTGC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGATGGGGCCCAGCGTTTaGAGATGGGGGACCAGCATG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEMGPSV*RWGTSM
Trigger: CATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCAT...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGTCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGESRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCGTTTTCTGCAAGCCTaGAGACCCTGCACTGCCGAC +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQERFLQA*RPCTAD
Trigger: GTCGGCAGTGCAGGGTCTTCAGGCTTGCAGAAAACG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGATACCCGCTCCAAATaGTGGCGGCTCCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEDTRSK*WRLLDP
Trigger: TGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCCCCGCAGTCGGTGGTaGTTTGTTCTGGTAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERPRSRW*FVLVAA
Trigger: TGCGGCTACCAGAACAAATCACCACCGACTGCGGGG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGCGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCCGACCTTCTTGTTCTaGAGCCTTCTCCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTPTFLF*SLLLSV
Trigger: GACTGACAGGAGAAGGCTGCAGAACAAGAAGGTCGG...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CAAGCGTGTCTGCCGAGGCAGGGTGGCGCCCTGGGGTACGTCCAGCGAGGCCCTGGGGACATGTGGATCTaGCCGTGTGCATGTTCACGG +
Preference number: 4 (lower is better)
Translates to: QACLPRQGGALGYVQRGPGDMWI*PCACSR
Trigger: CCGTGAACATGCACACGGGCAGATCCACATGTCCCC...AGGGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGACACGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCGTACTGGAAGCCTGTaGTCCTCCGGCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQERTGSL*SSGRYP
Trigger: AGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQECRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCACGTGACTTTGGATTGTaGCCTCAGGAACTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GHAAPSARPSPHGPTRTARDFGL*PQELRE
Trigger: TTCTCTGAGTTCCTGAGGCCACAATCCAAAGTCACG...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAGGGACCCCCTGTGCTaGGGCATGGTGTACCCCAAA +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERRDPLC*GMVYPK
Trigger: TTTGGGGTACACCATGCCCCAGCACAGGGGGTCCCT...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERSACGQ*RGSRHA
Trigger: GGCATGGCGACTTCCTCTTCACTGGCCACATGCACT...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCTCAAAGTAATGACTTaGCCGTTTTCTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRACGSQRAALTARPHQDLKVMT*PFSASL
Trigger: CAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAG...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCCTGGCAAAGGTGTGCTaGCCACCAGCCACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGLAKVC*PPATVG
Trigger: TCCCACTGTGGCTGGTGGTCAGCACACCTTTGCCAG...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGCAGCATCCCTGTAATTaGGGAGAGGCTGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEQHPCN*GEAASL
Trigger: CAGGCTGGCAGCCTCTCCTCAATTACAGGGATGCTG...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGACTTCTACTCCACCTaGCACCGGGTTCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSDFYST*HRVLAY
Trigger: GTAGGCCAGAACCCGGTGTCAGGTGGAGTAGAAGTC...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp AGCAGATGGAAACCCTCAGGGCTGGGTGCAGCATTCACCCCTGGGGTGCCAGGCCAACCTGAGATGGCTTaGCATGCCGGGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRWKPSGLGAAFTPGVPGQPEMA*HAGASA
Trigger: GGCCGAGGCCCCGGCATGTCAAGCCATCTCAGGTTG...GCCTGGCACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGTTTCCATCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GAGTCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCAGGGAGGATGAGGGGTaGGCCAGGACTGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESQLPWGPAFADGGPAWSREDEG*ARTVPA
Trigger: GGCAGGGACAGTCCTGGCTCACCCCTCATCCTCCCT...GCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGAGGTCCGACGCCCTGTaGCTCCTAACCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKRSDAL*LLTSSY
Trigger: GTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCAACACTCAAGAGTCTaGGCCTCTGCTGCCGTAGCG +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERQHSRV*ASAAVA
Trigger: CGCTACGGCAGCAGAGGCGCAGACTCTTGAGTGTTG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATCCTTCCAGTGCACCTaGACCAAGAGCCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSSFQCT*TKSHGG
Trigger: CCCACCATGGCTCTTGGTGCAGGTGCACTGGAAGGA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCCCAGTTCCTTCCAGTaGACCTGCACCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEPSSFQ*TCTKSH
Trigger: ATGGCTCTTGGTGCAGGTGCACTGGAAGGAACTGGG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTTCTGCCGAGGCAGGGTaGCGCCCTGGGGTACGTCCA +
Preference number: 4 (lower is better)
Translates to: SQLPWGPAFADGGPAWSCSAEAG*RPGVRP
Trigger: TGGACGTACCCCAGGGCGCCACCCTGCCTCGGCAGA...ACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGCGTTTTCTGCAAGCCTaGAGACCCTGCACTGCCGAC +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKRFLQA*RPCTAD
Trigger: GTCGGCAGTGCAGGGTCTTCAGGCTTGCAGAAAACG...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKSADRV*SRAGGW
Trigger: CCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGA...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCCGGAGCAAGCGTGTCTaGCGAGGCAGGGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVRSKRV*RGRVAP
Trigger: GGGCGCCACCCTGCCTCGGCAGACACGCTTGCTCCG...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKLTSSY*KPVVLR
Trigger: CCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAG...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCGAGGTAAAGCGAAGGTaGGGCCCCACCACGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGEVKRR*GPTTCE
Trigger: TTCACACGTGGTGGGGCCCCACCTTCGCTTTACCTC...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGCCCTGTGCTGGGGCATaGTGTACCCCAAATTTCATG +
Preference number: 4 (lower is better)
Translates to: RTAPPGPQRPPQPVTHQEPCAGA*CTPNFM
Trigger: CATGAAATTTGGGGTACACCATGCCCCAGCACAGGG...CTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTGCCTCTGACTTGTCTTaGGTAAGTCTCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GPHRTAPPGPQRPPQPVTASDLS*VSLTAL
Trigger: AAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC...AGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCGTCCAGCGAGGCCCTaGACACGGGCCGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: RILVFILGNGNNRRPEKDRPARP*TRAVGT
Trigger: GGTGCCCACGGCCCGTGTTCAGGGCCTCGCTGGACG...GTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGAGGCAGAGACTGGAGTaGTGCAGCCACCATCAAGGA +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKRQRLE*CSHHQG
Trigger: TCCTTGATGGTGGCTGCATCACTCCAGTCTCTGCCT...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGCAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCAGTTGCTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGCGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: AVAVRCRWDRTRRSARTMRRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...CATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCTTCTGGCTGGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: ASGWSDPRLYSRERKQPAVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...CGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCAGTCTGCGCCTCTGCTaGCGTAGCGTCAAACACCAA +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGSLRLC*RSVKHQ
Trigger: TTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACT...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCCCCAGTTCCTTCCAGTaGACCTGCACCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGPSSFQ*TCTKSH
Trigger: ATGGCTCTTGGTGCAGGTGCACTGGAAGGAACTGGG...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp AGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGCTCCTGTGGGCTGGGCACCTGTaGTGTGGCGCCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRILWGHGVTNLGSDQLLWAGHL*CGACWQ
Trigger: TTGCCAGCAGGCGCCACAGCACAGGTGCCCAGCCCA...CAGGAGCTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GAGTCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCCCTGCCCAGGTCAGATaGCCCCAGCAGATGGAAACC +
Preference number: 4 (lower is better)
Translates to: ESQLPWGPAFADGGPAWSPAQVR*PQQMET
Trigger: GGTTTCCATCTGCTGGGGGCATCTGACCTGGGCAGG...GCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGATGAGAGCACCTGTTaGGTACATCCACTCCACGGC +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKDESTC*VHPLHG
Trigger: GCCGTGGAGTGGATGTACCCAACAGGTGCTCTCATC...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: VGSSSLFSGTETTGGLKRTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...CCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCT +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGSWVTC*MEPRTA
Trigger: AGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGA...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574053.1
CDS-3UTR CCA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGACTCCGGCTTCTGGCTaGTCGGATCCTCGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HGPTRTAAPTAACDSSGETPASG*SDPRLY
Trigger: ATAAAGACGAGGATCCGACCAGCCAGAAGCCGGAGT...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAAGGTGTAGGCGTCTaGGCATCCAACAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERKGVGV*ASNKQE
Trigger: CTCCTGCTTGTTGGATGCCCAGACGCCTACACCTTT...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GAGTCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCGATGGGGGACCAGCATaGAGCTGTGGGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ESQLPWGPAFADGGPAWSDGGPA*SCGLWL
Trigger: CAACCAGAGCCCACAGCTCCATGCTGGTCCCCCATC...GCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp TCACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCGGCGAAGTCGCTGGTaGAGACGGCTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: SHIHCAQRPVLHPTAGQMRRSRW*RRLGAP
Trigger: AGGTGCTCCTAGCCGTCTGCACCAGCGACTTCGCCG...CATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp AATGGAAATGCAGCAGCAGGCGCTGAGGGACAGTCGCCGGGCGGAGCAAGCGTGGAGCCTGCAGACCTGTaGTGGCTCAGATCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NGNAAAGAEGQSPGGASVEPADL*WLRSEL
Trigger: CAGCTCAGATCTGAGCCAGCACAGGTCTGCAGGCTC...CACGCTTGCTCCGCCCGGCGACTGTCCCTCAGCGCCTGCTGCTGCATTTCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCTCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAAATAACAACTCTGAATaGCACCTTTTCACACATCCA +
Preference number: 4 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGNNNSE*HLFTHP
Trigger: TGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATT...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp GCAGTTGCTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGTGCTGTGGCGCCTGCTaGCAAAGGTGTGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AVAVRCRWDRTRRSARTMCCGAC*QRCADH
Trigger: GTGGTCAGCACACCTTTGCCAGCAGGCGCCACAGCA...CATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGGCATGTTCACGGCCGTaGGCTCCTGCAGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: RGQCRLRCNPTAFLVALRACSRP*APAGGQ
Trigger: CTGTCCTCCTGCAGGAGCCCACGGCCGTGAACATGC...CCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 72 bp AGGACCAGGCGTTCAGCGAGGACAATGCAGGCTGCGTaGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RTRRSARTMQAA*QSDGLSGCSPG
Trigger: CCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAACGCCTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 72 bp TGGAAACCGAGTCACAGCTCCCATGGGGCCCAGCGTTaGCAGATGGGGGACCAGCATGGAGCTGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WKPSHSSHGAQR*QMGDQHGAVGS
Trigger: AGAGCCCACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTCGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTGGGCCCCACCACGTGTaGAGGAGGAGCCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSGPHHV*RRSPGM
Trigger: CATCCCAGGGCTCCTCCTTCACACGTGGTGGGGCCC...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TCTGGTAGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGTTCCTGTGTGCCTCGTaGGTCAGCCCGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SGSRILWGHGVTNLGSDQFLCAS*VSPLPF
Trigger: GAAGGGGAGCGGGCTGACGCACGAGGCACACAGGAA...CTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTGCACCTCGGTGTCACTaGAGGGACGGCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSAPRCH*RDGTAQ
Trigger: CTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGC...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCCGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGCCTGGACCCACCCGCTaGCGGCCACAGGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGPGPTR*RPQVPH
Trigger: GTGTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGG...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAGGAGCAGATTCCCTaGCGCCCCGCTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RILVFILGNGNNRRPEKDQEQIP*RPAVGW
Trigger: CCAGCCCACAGCGGGGCGGCAGGGAATCTGCTCCTG...GTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGCCACCCACCCTGGCCTaGCCAGGTCAGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VGSSSLFSGTETTGGLKRPPTLA*PGQMPP
Trigger: TGGGGGCATCTGACCTGGGCAGGCCAGGGTGGGTGG...CCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCGCAGTTGCTGTCCGGTaGAGGTGGGACAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVAVAVR*RWDRTR
Trigger: CCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGACCACCCCACATAGGCTaGCCCCTCGACCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRPPHIG*PLDPQS
Trigger: ACTCTGCGGGTCGAGGGGGCAGCCTATGTGGGGTGG...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTAGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGAGAGTGTTGGCAGTTTaGGGGGAAGGAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: APPGPQRPPQPVTHQERKRVLAV*GEGGCR
Trigger: TCTACAACCTCCTTCCCCCCAAACTGCCAACACTCT...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp AGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACGGCAGGGTGGCGCCCTaGGGTACGTCCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPDAVTPNVFREQYQTAHGRVAP*GTSSEA
Trigger: GGCCTCGCTGGACGTACCCCAGGGCGCCACCCTGCC...GTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCAGTTGCTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGGAGTCACAGCTCCCATaGGGCCCAGCGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: AVAVRCRWDRTRRSARTMESQLP*GPAFAD
Trigger: ATCTGCAAACGCTGGGCCCCATGGGAGCTGTGACTC...CATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp AGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RPDAVTPNVFREQYQTAHTPAAS*RAPASG
Trigger: GCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGT...GTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp CTTTTCACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: LFTHPLCPTASASPNRRPSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...TGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp TCACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SHIHCAQRPVLHPTAGQMGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...CATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp TCTGGTAGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGTGGGGTCTGGTTAACTaGCACTCCCAGGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: SGSRILWGHGVTNLGSDQWGLVN*HSQGPP
Trigger: AGGGGGTCCCTGGGAGTGTCAGTTAACCAGACCCCA...CTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAAACCCACCTCCCCTGTaGAGCCCGCCTCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRNPPPL*SPPQPS
Trigger: TGAGGGTTGAGGCGGGCTTCACAGGGGAGGTGGGTT...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTTGCCAGGCAGGGTCATaGTATCAAGTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQLPWGPAFADGGPAWSCCQAGS*YQVPRK
Trigger: CTTCCTGGGGACTTGATATCATGACCCTGCCTGGCA...ACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCCAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: THPLCPTASASPNRRPDAQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...GGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCTGGATGGCTGAGTCCTaGCGCTCAGGCTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVWMAES*RSGSWV
Trigger: TACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCA...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: THPLCPTASASPNRRPDAHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...GGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTCCTGGACCCACCCGCTaGCGGCCACAGGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGPGPTR*RPQVPH
Trigger: GTGTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGG...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAGTGGATCTGCCCGTGTaGATGTTCACGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRVDLPV*MFTAVG
Trigger: GCCCACGGCCGTGAACATGCACACGGGCAGATCCAC...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GCAGTTGCTGTCCGGTGCAGGTGGGACAGGACCAGGCGTTCAGCGAGGACAATGCAATGCAGGCTGCGTTaGAATCCGACGGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AVAVRCRWDRTRRSARTMQCRLR*NPTAFL
Trigger: CAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTG...CATTGTCCTCGCTGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGCAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSEVLEA*GTAEPR
Trigger: GCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTC...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCGTGAAGGAGGAGCCCTaGGATGCAACCTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVVKEEP*DATCPE
Trigger: CTCTGGGCAGGTTGCATCCCAGGGCTCCTCCTTCAC...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGGCACTGTGGGCAGGCTaGGGCCACAGGGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGALWAG*GHRAGP
Trigger: AGGTCCTGCCCTGTGGCCCCAGCCTGCCCACAGTGC...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 72 bp ATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCA +
Preference number: 4 (lower is better)
Translates to: IGQGILGWKLMG*SVARTSTASVP
Trigger: TGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
3UTR CAA 72 bp GCCGGTACACAGTGCTTACCCAGAGTGCCTGAGCATTaGGCAAGGCCGGCATGGTGCCCACTGACCACATCA +
Preference number: 4 (lower is better)
Translates to: AGTQCLPRVPEH*ARPAWCPLTTS
Trigger: TGATGTGGTCAGTGGGCACCATGCCGGCCTTGCCAAATGCTCAGGCACTCTGGGTAAGCACTGTGTACCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 72 bp AATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTaGCTCTCCGGGGATGAGTTACACCCTGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: NAGCVAIRRPFW*LSGDELHPEPQ
Trigger: CTGGGGCTCAGGGTGTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTAACCCTGGTTCCAGATaGCCACGAGGGCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSNPGSR*PRGLGR
Trigger: GCGTCCCAGCCCTCGTGGTCATCTGGAACCAGGGTT...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGACTTACCCAGAGTGCCTaGGCATTTGGCAAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRLTQSA*AFGKAG
Trigger: GCCGGCCTTGCCAAATGCTCAGGCACTCTGGGTAAG...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RILVFILGNGNNRRPEKDMHTVR*RAGEKV
Trigger: CACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT...GTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTGGCGCAGACAGCTCGTaGAGGTCCGACGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGGADSS*RSDALC
Trigger: GCACAGGGCGTCGGACCTGCACGAGCTGTCTGCGCC...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTAAAGCACCTCGGTGTCACTaGAGGGACGGCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LGNGNNRRPEKDQSSSFKAPRCH*RDGTAQ
Trigger: CTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGC...TTTAAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTGCACCTCGGTGTCACTaGAGGGACGGCACGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFAPRCH*RDGTAQ
Trigger: CTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGC...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACAC +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGKRKSP*PGRTPH
Trigger: GTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTT...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp AGTGCTTCACCCAACCGCAGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAAAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACAC +
Preference number: 4 (lower is better)
Translates to: SASPNRRPDAVTPNVFREKRKSP*PGRTPH
Trigger: GTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTT...TTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp ACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGCCAGTGCTTACCCAGAGTaGCTGAGCATTTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: THPLCPTASASPNRRPDASAYPE*LSIWQG
Trigger: GCCTTGCCAAATGCTCAGGCACTCTGGGTAAGCACT...GGCATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTATGGAGGGGAAGCAGTTaGTGTCCGGTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVWRGSS*CPVQVG
Trigger: TCCCACCTGCACCGGACAGCAACTGCTTCCCCTCCA...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTCTGGGAACCCAGCTGTaGAGCCCCCGCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFLGTQL*SPRHRL
Trigger: GAGCCTGTGGCGGGGGCTGCACAGCTGGGTTCCCAG...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATACGCGCCCCTGCCAGTaGCCGTCACCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHTRPCQ*PSPSGT
Trigger: GGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGT...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTAATGATGGCGGCTCCTaGACCCACCCGCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGNDGGS*THPLPA
Trigger: GGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATT...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGCATCCTTTGGGGACATaGGGTCACCAACCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RGQCRLRCNPTAFLVALRHPLGT*GHQPGF
Trigger: GAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATG...CCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGCCATCAAGGAGCACCTaGAGCCCCCAGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GRILVFILGNGNNRRPEKPSRST*SPQRPR
Trigger: CCTTGGCCTCTGGGGGCTCCAGGTGCTCCTTGATGG...CTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CTCAGCTTCTCTCTCATGGCCATCAGCCGACTGGACCCCAGGGTGAAAGGTGTACCCAGCGTTTGCAGATaGGGGACCAGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSFSLMAISRLDPRVKGVPSVCR*GTSMEL
Trigger: CAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGG...TACACCTTTCACCCTGGGGTCCAGTCGGCTGATGGCCATGAGAGAGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GCTTCTGGCTGGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGAGGCCAAGGAGAAGATaGAGAGTCCTCCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASGWSDPRLYSRERKQPARPRRR*RVLPWQ
Trigger: CTGCCAGGGGAGGACTCTTCATCTTCTCCTTGGCCT...CGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CGAGGACAATGCAGGCTGCGTTGCAATCCGACGGCCTTTCTGGTTGCTCTCCGGAACAGAAGCCTCCCGTaGAGCGTGACTTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: RGQCRLRCNPTAFLVALRNRSLP*SVTSTP
Trigger: TGGAGTAGAAGTCACGCTTCACGGGAGGCTTCTGTT...CCGGAGAGCAACCAGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTCCTGTGTGCCTCGTaGGTCAGCCCGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGFLCAS*VSPLPF
Trigger: GAAGGGGAGCGGGCTGACGCACGAGGCACACAGGAA...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGGTCCTGACGCGCCCCTaGCAGTGGCCGTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKVLTRP*QWPSPS
Trigger: CGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGAC...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGTTCCAGATGCCGGGCTaGAGGCCTGGCTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: GRILVFILGNGNNRRPEKFQMPG*RPGSKP
Trigger: GGGTTTTGAGCCAGGCCTGCAGCCCGGCATCTGGAA...CTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp AGTGCTTCACCCAACCGCAGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAAACCCTCAGGGCTGGGTaGAGCATTCACCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SASPNRRPDAVTPNVFRETLRAG*SIHPWG
Trigger: ACCCCAGGGGTGAATGCTGCACCCAGCCCTGAGGGT...TTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp TCTGGTAGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGAAGTCTCACTGCTCTTaGAGCACCTGGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: SGSRILWGHGVTNLGSDQKSHCS*STWGTM
Trigger: CATCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTT...CTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGGAACGGCGAAGTCGCTaGTGCAGACGGCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VGSSSLFSGTETTGGLKRERRSR*CRRLGA
Trigger: TGCTCCTAGCCGTCTGCACCAGCGACTTCGCCGTTC...CCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp CTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTAAACTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LGNGNNRRPEKDQSSSFKLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...TTTAAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTCTCACAGCCCTGTCCTaGCCCAGCGGAGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: LFSGTETTGGLKRTKAHPLTALS*PSGETR
Trigger: CCTCGTCTCTCCGCTGGGCCAGGACAGGGCTGTGAG...AGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGATGCCCCCAGCAGATaGAAACCCTCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRILVFILGNGNNRRPEKDAPSR*KPSGLG
Trigger: ACCCAGCCCTGAGGGTTTCCATCTGCTGGGGGCATC...CTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAACCAGCATGGAGCTGTaGGCTCTGGTTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRTSMEL*ALVALS
Trigger: GCTGAGAGCAACCAGAGCCCACAGCTCCATGCTGGT...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
3UTR CAA 72 bp GAAGCCACCGCCCCCGAGAGCTCCAAAGCCTCTGACTaGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: EATAPESSKASD*SWVSLTALAAP
Trigger: AGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGCTTTGGAGCTCTCGGGGGCGGTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGCTCTGCCCACACCGTaGCTTTGGATTGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRILVFILGNGNNRRPEKALPTP*LWIVAS
Trigger: TGAGGCCACAATCCAAAGTCACGGTGTGGGCAGAGC...CTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp TCTGGTAGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGCCACACACTCAACCTTaGCCCTCTCTTTTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SGSRILWGHGVTNLGSDQPHTQP*PSLFPR
Trigger: CCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGG...CTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTCGCTCCCCTTCCAGCTaGACCGGTCGCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGRSPSS*TGRWST
Trigger: AGTACTCCAGCGACCGGTGCAGCTGGAAGGGGAGCG...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTCCAGGCCAAAACACTaGACCCGGCCGGGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKSRPKH*TRPGLP
Trigger: CGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GGCCCCAATCCAGTGACCAATGTCCTAGAGAAAGATCTGGACACAGACACAGGGAGGTCCGACGCCCTGTaGCTCCTAACCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GPNPVTNVLEKDLDTDTGRSDAL*LLTSSY
Trigger: GTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT...CCCTGTGTCTGTGTCCAGATCTTTCTCTAGGACATTGGTCACTGGATTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGGGCGCAGACAGCTCGTaGAGGTCCGACGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKGADSS*RSDALC
Trigger: GCACAGGGCGTCGGACCTGCACGAGCTGTCTGCGCC...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTCGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTCGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATCGGGAGTGCAGGCGGTaGTTGTCCCCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHRECRR*LSPGPP
Trigger: TGGAGGGCCTGGGGACAAGCACCGCCTGCACTCCCG...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGAATGATGGCGGCTCCTaGACCCACCCGCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKNDGGS*THPLPA
Trigger: GGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATT...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTGGTAGCCGCATCCTTTaGGGACATGGGGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSGSRIL*GHGVTN
Trigger: GTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACC...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TCTGGTAGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGTGCCTGATTCATCAATaGGGATGCAGGCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGSRILWGHGVTNLGSDQCLIHQ*GCRLGS
Trigger: AGACCCCAGCCTGCATCCCCATTGATGAATCAGGCA...CTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCTACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTGGGCACCTGTGCTGTaGCGCCTGCTGGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LFSGTETTGGLKRTKAHPWAPVL*RLLAKV
Trigger: CACCTTTGCCAGCAGGCGCCACAGCACAGGTGCCCA...AGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTCCTGACACCGGGTTCTaGCCTACCCCAGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: LFSGTETTGGLKRTKAHPPDTGF*PTPASL
Trigger: CAGGGATGCTGGGGTAGGCCAGAACCCGGTGTCAGG...AGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTCCCCAGGAAGGAGCTaGGGGTGCAGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSPGRS*GCRSAG
Trigger: GCCTGCAGATCTGCACCCCCAGCTCCTTCCTGGGGA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGCTGCCCAACCTGAGATaGCTTGACATGCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGLPNLR*LDMPGP
Trigger: AGGCCCCGGCATGTCAAGCCATCTCAGGTTGGGCAG...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGCAGGCCAGATGCCGTaGCTCCTAACGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GRILVFILGNGNNRRPEKAGQMP*LLTSLE
Trigger: CTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGC...CTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGGTCCTCCCCCTGGCTaGGAAGATGAAGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVGPPPG*EDEGSS
Trigger: GGAGGAACCTTCATCTTCTCAGCCAGGGGGAGGACC...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTCAGCGCAGATACACCTaGTCCACCTCCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSQRRYT*STSFLC
Trigger: ACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTG...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTGGATGGCTGAGTCCTaGCGCTCAGGCTCGTGGGTA +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVWMAES*RSGSWV
Trigger: TACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTGGAGTATCACAGGAATaGCAGCAGGCCCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSGVSQE*QQALCT
Trigger: GGTACACAGGGCCTGCTGGCATTCCTGTGATACTCC...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGCAACACTCAAGAGTCTaGGCCTCTGCTGCCGTAGCG +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGQHSRV*ASAAVA
Trigger: CGCTACGGCAGCAGAGGCGCAGACTCTTGAGTGTTG...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ACCCACACACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTGATCCGACGGCCTTTCTaGTTGCTCTCCGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: THTLNLDPLFFLGGHVDLIRRPF*LLSGDE
Trigger: CTCATCCCCGGAGAGCAACCAGAAAGGCCGTCGGAT...CAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: ILQHFQSARASLAGSSWGGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTCTCTGCGATGTCCCTaGATCAGGGTGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSLRCP*IRVAGG
Trigger: ACCTCCAGCCACCCTGATTCAGGGACATCGCAGAGA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGAGGCTGCCAGCCTaGAACCCGACCTTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVERLPA*NPTFLF
Trigger: GAACAAGAAGGTCGGGTTTCAGGCTGGCAGCCTCTC...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp GGCCCCAATCCAGTGACCAATGTCCTAGAGAAAGATCTGGACACAGACACAGGGAGTAGCAAAGTCCAGTaGGCCAGGACCCCCTGCATT +
Preference number: 4 (lower is better)
Translates to: GPNPVTNVLEKDLDTDTGSSKVQ*ARTPCI
Trigger: AATGCAGGGGGTCCTGGCTCACTGGACTTTGCTACT...CCCTGTGTCTGTGTCCAGATCTTTCTCTAGGACATTGGTCACTGGATTGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTCATTCCTGCCCAACCTaGGATGGCTTGACATGCCGG +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFHSCPT*DGLTCR
Trigger: CCGGCATGTCAAGCCATCTCAGGTTGGGCAGGAATG...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp TTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LFSGTETTGGLKRTKAHPSADRV*SRAGGW
Trigger: CCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGA...AGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATCGCGCCTCCCCGAAGTaGATGTGGCCAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHRASPK*MWPVKR
Trigger: CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCCTGTTTGGTAAGCTTTaGCTTCCCCTAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVLFGKL*LPLDSG
Trigger: TCCAGAGTCTAGGGGAAGGCAAAGCTTACCAAACAG...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTGAGGACAATGCAGGCTaGGTTGCAATCCGACGGCCT +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFEDNAG*VAIRRP
Trigger: AGGCCGTCGGATTGCAACGCAGCCTGCATTGTCCTC...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFLTSSY*KPVVLR
Trigger: CCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAG...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATTCACGCGCAGGTGGATaGCTGAGTCCTGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHSRAGG*LSPAAQ
Trigger: CTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGA...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTTGGCAAGGCCGGCATaGTGCCCACTGACCACATCA +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVLARPA*CPLTTS
Trigger: TGATGTGGTCAGTGGGCACCATGCCGGCCTTGCCAA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTTCCTCGGGGGACATGTaGATCTGCCCGTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFSSGDM*ICPCAC
Trigger: ACATGCACACGGGCAGATCCACATGTCCCCCGAGGA...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGGCTGTCCGGTGCAGGTaGGACAGGACCAGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKAVRCR*DRTRRS
Trigger: TGAACGCCTGGTCCTGTCCCACCTGCACCGGACAGC...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTAGCCCTGTGACGAGCTaGAAACCGAGTCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSPVTS*KPSHSS
Trigger: GGAGCTGTGACTCGGTTTCCAGCTCGTCACAGGGCT...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKSSGSP*SVGHSR
Trigger: TCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR TCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGGATACCCGCTCCAAATaGTGGCGGCTCCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKDTRSK*WRLLDP
Trigger: TGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATC...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACCCACACACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTGTTCACACATCCACTGTaGCCAACGGCCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: THTLNLDPLFFLGGHVDLFTHPL*PTASAS
Trigger: TGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGAA...CAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp GAAGCTCATGGGGTTGAGTGTGGCGAGAACGTCCACAGCTTCGGTACCAGGGTCTGGAAATGGGGTCTTTaGGGACGTAATCGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: EAHGVECGENVHSFGTRVWKWGL*GRNRFK
Trigger: CTTAAACCGATTACGTCCGCAAAGACCCCATTTCCA...GACCCTGGTACCGAAGCTGTGGACGTTCTCGCCACACTCAACCCCATGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGCCCAGGGACCCCCTGTaGTGGGGCATGGTGTACCCC +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLPRDPL*WGMVYP
Trigger: GGGGTACACCATGCCCCAGCACAGGGGGTCCCTGGG...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGACGGCCTTTCTGGTTaGTCTCCGGGGATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVDGLSG*SPGMSY
Trigger: GTAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTC...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp TTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTGTTCAGCGAGGACAATaGAGGCTGCGTTGCAATCCG +
Preference number: 4 (lower is better)
Translates to: LFSGTETTGGLKRTKAHPVQRGQ*RLRCNP
Trigger: CGGATTGCAACGCAGCCTGCATTGTCCTCGCTGAAC...AGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCCCCACCCGTGGGACCTaGAGCCGGACTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: IWLQNFRHENNNSEWHLFPTRGT*SRTLAP
Trigger: AGGGGCCAGAGTCCGGCTGCAGGTCCCACGGGTGGG...GAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTCTTGTTGTGACCTGTaGGAGCCTGCAGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSCCDL*EPADLC
Trigger: GCACAGGTCTGCAGGCTCCCACAGGTCACAACAAGA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp AGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACGACCCGCAGAGTTCTTaGAAAACCTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RPDAVTPNVFREQYQTAHDPQSS*KTSRAS
Trigger: GGAAGCCCTGGAGGTTTTCCAAGAACTCTGCGGGTC...GTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp AGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACAGTATCAGACGGCACACAAACAACCGGCGGCCTaGAAAGGACCAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: RPDAVTPNVFREQYQTAHKQPAA*KGPKLI
Trigger: GATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTT...GTGTGCCGTCTGATACTGTTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTCTCTGCGATGTCCCTaGATCAGGGTGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKSLRCP*IRVAGG
Trigger: ACCTCCAGCCACCCTGATTCAGGGACATCGCAGAGA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATCGTACTGGAAGCCTGTaGTCCTCCGGCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHRTGSL*SSGRYP
Trigger: AGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCGTACTGGAAGCCTGTaGTCCTCCGGCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKRTGSL*SSGRYP
Trigger: AGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp CTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTAAATCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGNGNNRRPEKDQSSSFKSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...TTTAAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTCCCTGTACATCCTCTaGAAGTCCTTGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVSLYIL*KSLKRG
Trigger: CCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATACAGACTCCGGCTTCTaGCTGGTCGGATCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHTDSGF*LVGSSS
Trigger: AGACGAGGATCCGACCAGCCAGAAGCCGGAGTCTGT...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTTTAAGACGAGGTCACTaGTGTGGGCCCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFLRRGH*CGPQSS
Trigger: ACTGGATTGGGGCCCACACCAGTGACCTCGTCTTAA...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp AGTGCTTCACCCAACCGCAGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACTTCTTGCCTTCATGTaGAGCTCCCCAACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SASPNRRPDAVTPNVFRELLAFM*SSPTFS
Trigger: AGAGAAGGTTGGGGAGCTCCACATGAAGGCAAGAAG...TTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GACGGCACACCAAGGCGTTTTAAGACACGGGAATTTGTTTCCTATGGACATTTCGGGCAATCCTCACGCTaGGAGCAAGGAGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DGTPRRFKTREFVSYGHFGQSSR*EQGGAL
Trigger: CAAGGCTCCTCCTTGCTCCCAGCGTGAGGATTGCCC...GAAATGTCCATAGGAAACAAATTCCCGTGTCTTAAAACGCCTTGGTGTGCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTGAGTCTCAAAGTAATGACTTaGCCGTTTTCTGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAFPIGQGILGWKLMGLSLKVMT*PFSASL
Trigger: CAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAG...ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTCGCTCCCCTTCCAGCTaGACCGGTCGCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: TSVMRITTLNGTFSHIHCRSPSS*TGRWST
Trigger: AGTACTCCAGCGACCGGTGCAGCTGGAAGGGGAGCG...ACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGAGTATCACAGGAATaGCAGCAGGCCCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHGVSQE*QQALCT
Trigger: GGTACACAGGGCCTGCTGGCATTCCTGTGATACTCC...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTCAAACACCAATCTCTaGGATGTCCCTGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGSNTNL*DVPESG
Trigger: CCCTGATTCAGGGACATCGCAGAGATTGGTGTTTGA...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR GCA 90 bp ACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTGAAGCCACTTCCAGATaGCGGGCTGCAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSVMRITTLNGTFSHIHCEATSR*RAAGLA
Trigger: AGCCAGGCCTGCAGCCCGGCATCTGGAAGTGGCTTC...ACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGGATGAGAGCACCTGTTaGGTACATCCACTCCACGGC +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKDESTC*VHPLHG
Trigger: GCCGTGGAGTGGATGTACCCAACAGGTGCTCTCATC...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCCTGCTCACGCGCAGGTaGATGGCTGAGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IWLQNFRHENNNSEWHLFLLTRR*MAESCR
Trigger: GCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAG...GAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTAGAGTGTTGGCAGTTTaGGGGGAAGGAGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVRVLAV*GEGGCR
Trigger: TCTACAACCTCCTTCCCCCCAAACTGCCAACACTCT...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp ATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCCGTGGGCACCGGACCTaGCGAAAGACAGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: IWLQNFRHENNNSEWHLFRGHRT*RKTDSG
Trigger: GCCGGAGTCTGTCTTTCGCCAGGTCCGGTGCCCACG...GAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp ACCCACACACTCAACCTTGACCCTCTCTTTTTCCTCGGGGGACATGTGGATCTGAATCAATTAGCGAGGTaGAAGCCCTCAGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: THTLNLDPLFFLGGHVDLNQLAR*KPSVSA
Trigger: AGCTGACACTGAGGGCTTCCACCTCGCTAATTGATT...CAGATCCACATGTCCCCCGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACTGCCGCTCAGGCTCGTaGGTAACTTGCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GSKTSVMRITTLNGTFSHCRSGS*VTCWME
Trigger: CTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCA...GTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGCCCCAGGGAAGGGATaGATTCCTCCAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHAPGKG*IPPEYH
Trigger: GTGATATTCTGGAGGAATCCATCCCTTCCCTGGGGC...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR TCA 90 bp GACGGCACACCAAGGCGTTTTAAGACACGGGAATTTGTTTCCTATGGACATTTCAAACAACCGGCGGCCTaGAAAGGACCAAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: DGTPRRFKTREFVSYGHFKQPAA*KGPKLI
Trigger: GATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTT...GAAATGTCCATAGGAAACAAATTCCCGTGTCTTAAAACGCCTTGGTGTGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR TCA 90 bp TTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGAGCTCCAAAGCCTCTaGCTTGTCTTGGGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: FAFYSISNRPGHPWLEAHELQSL*LVLGKS
Trigger: AGACTTACCCAAGACAAGTCAGAGGCTTTGGAGCTC...ATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACG +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLGSWVT*WMEPRT
Trigger: CGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCC...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTGGAGGGAGAGGCTCTaGCCACACCGTGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLWRERL*PHRDFG
Trigger: TCCAAAGTCACGGTGTGGGCAGAGCCTCTCCCTCCA...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR TCA 90 bp ATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCGGAAGCTCATGGGGTTaGGTGTGGCGAGAACGTCCA +
Preference number: 4 (lower is better)
Translates to: IWLQNFRHENNNSEWHLFGSSWG*VWRERP
Trigger: TGGACGTTCTCGCCACACTCAACCCCATGAGCTTCC...GAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp ACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSVMRITTLNGTFSHIHCHGVSP*QPHKGS
Trigger: TGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTG...ACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTCAAACACCAATCTCTaGGATGTCCCTGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKSNTNL*DVPESG
Trigger: CCCTGATTCAGGGACATCGCAGAGATTGGTGTTTGA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGCAGGGCATCCTTGGCTaGAAGCTCATGGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLQGILG*KLMGLS
Trigger: ACTCAACCCCATGAGCTTCCAGCCAAGGATGCCCTG...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CCA 90 bp ACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTAGCCAGCTTTCCTTCTaGAACCGCAGGGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: TSVMRITTLNGTFSHIHCSQLSF*NRREPL
Trigger: CAGAGGTTCCCTGCGGTTCCAGAAGGAAAGCTGGCT...ACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR GCA 90 bp ATTTGGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCCCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: IWLQNFRHENNNSEWHLFPARRP*FSADRV
Trigger: GACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG...GAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR GCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGCTGCACGGGAGGAACTaGCTGATTCATCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLLHGRN*LIHQWG
Trigger: TCCCCATTGATGAATCAGGCAGTTCCTCCCGTGCAG...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp GGCTCCAAAACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACGAGTGTGACCTTATTTaGAAATGGGGTCTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GSKTSVMRITTLNGTFSHECDLI*KWGLCG
Trigger: TCCGCAAAGACCCCATTTCCAAATAAGGTCACACTC...GTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTTTTGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CCA 90 bp AACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGAATAACAACTCTGAATaGCACCTTTTCACACATCCA +
Preference number: 4 (lower is better)
Translates to: NFRHENNNSEWHLFTHPLNNNSE*HLFTHP
Trigger: TGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATT...CAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS TCA 90 bp GACCCACCCGCTGCCGGCCACAGGTGCCACACGGACCCCTGCCCGTaGGGCAGGCCGGCGCCATCTCCGCCCTTCGGCACAAGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: DPPAAGHRCHTDPCP*GRPAPSPPFGTRAP
Trigger: TGGGGCCCTTGTGCCGAAGGGCGGAGATGGCGCCGGCCTGCCTCACGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGCGGGTGGGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAGAGTGCAGGCGGTGCTaGTCCCCAGGCCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGECRRC*SPGPPD
Trigger: GTCTGGAGGGCCTGGGGACAAGCACCGCCTGCACTC...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 90 bp GGAAGTCGCCATGCCCCGGCCGCACGCCACACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGCCGTCACCCTCGGGCACCGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GSRHAPAARHTPAAS*RAPASGRHPRAPAR
Trigger: TCGAGCCGGTGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGTGTGGCGTGCGGCCGGGGCATGGCGACTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGATCGGCCAGGGCATCCTaGGCTGGAAGCTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGSARAS*AGSSWG
Trigger: ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATG +
Preference number: 5 (lower is better)
Translates to: ACGSQRAALTARPHQDRSAGEKV*GRRLTM
Trigger: CATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGC...GCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATG +
Preference number: 5 (lower is better)
Translates to: GSGLGPGHAAPSARPSPHAGEKV*GRRLTM
Trigger: CATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGC...GTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATG +
Preference number: 5 (lower is better)
Translates to: PRACGSQRAALTARPHQDAGEKV*GRRLTM
Trigger: CATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGC...GTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATG +
Preference number: 5 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTAGEKV*GRRLTM
Trigger: CATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGC...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp CGCGCCTCCCCGAAGTGCATGTGGCCAGTGAAGAGGAAGTCGCCATaGCCCGGCCGCACGCCACACTCCAGCAGCGTCCTGACGCGCCCC +
Preference number: 5 (lower is better)
Translates to: RASPKCMWPVKRKSP*PGRTPHSSSVLTRP
Trigger: GGGGCGCGTCAGGACGCTGCTGGAGTGTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp GGACGATACCCGCTCCAAATGATGGCGGCTCCTGGACCCACCCGCTaGCGGCCACAGGTGCCACACGGACCCCTGCCCGTGAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GRYPLQMMAAPGPTR*RPQVPHGPLPVRQA
Trigger: GGCCTGCCTCACGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 90 bp GGCCCCACCCAGTTCCTTCCAGTGCACCTGCACCAAGAGCCATGGTaGGGCGGGGCCGAGCTCCCGGGAGTGCAGGCGGTGCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GPTQFLPVHLHQEPW*GGAELPGVQAVLVP
Trigger: GGGGACAAGCACCGCCTGCACTCCCGGGAGCTCGGCCCCGCCCCACCATGGCTCTTGGTGCAGGTGCACTGGAAGGAACTGGGTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRRLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VRPGPRACGSQRAALTARRLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...CCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GHAAPSARPSPHGPTRTARLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...TGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGAAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: AQGMRLPARGPHRTAPPGRLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...TCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CAGGGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 5 (lower is better)
Translates to: QGQAWAQGMRLPARGPHRWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...GCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCGCCGACCCGCAGAGTTCTaGGAAAACCTCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: MRLPARGPHRTAPPGPQRRPAEF*ENLQGF
Trigger: GAAGCCCTGGAGGTTTTCCAAGAACTCTGCGGGTCG...GCGCTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp CACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAGTGCAGGCGGTGCTaGTCCCCAGGCCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: HGPTRTAAPTAACDSSGEECRRC*SPGPPD
Trigger: GTCTGGAGGGCCTGGGGACAAGCACCGCCTGCACTC...CTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGGCCCCACCAGGACCGCAGCCCACACACTCAACCTaGACCCTCTCTTTTTCCTCG +
Preference number: 5 (lower is better)
Translates to: GMRLPARGPHRTAPPGPQPTHST*TLSFSS
Trigger: CGAGGAAAAAGAGAGGGTCAAGGTTGAGTGTGTGGG...CTGCGGTCCTGGTGGGGCCGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp TCACCGCACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCATCGGCCAGGGCATCCTaGGCTGGAAGCTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: SPHGPTRTAAPTAACDSSSARAS*AGSSWG
Trigger: ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA...TGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGTGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGTCGGCCAGGGCATCCTaGGCTGGAAGCTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERSARAS*AGSSWG
Trigger: ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS TCA 90 bp TCAGCCCCCTCTCCTGGGCATCCCTGTACATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGAGCCGCGCGCCACACTCCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SAPSPGHPCTSSGSP*SVGHSRAARHTPAA
Trigger: CGCTGCTGGAGTGTGGCGCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGATGCCCAGGAGAGGGGGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574053.1
ENST00000633735.1
CDS TCA 90 bp CACCCGCACCCACAGAGAGTCAGTGAGGACGATACCCGCTCCAAATaGTGGCGGCTCCTGGACCCACCCGCTGCCGGCCACAGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: HPHPQRVSEDDTRSK*WRLLDPPAAGHRCH
Trigger: GTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGGGTGCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 90 bp GCCCCTGCCAGTGGCCGTCACCCTCGGGCACCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTCTGCTCACGCGCAGGTGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: APASGRHPRAPARRP*FSADRVCSRAGGWL
Trigger: CAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGGTGCCCGAGGGTGACGGCCACTGGCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS CCA 90 bp AGCTCGTGCAGGTCCGACGCCCTGTGCCTCCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGGCCGATATCCTGCTGCGGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSCRSDALCLLTSSY*KPVVLRPISCCGVA
Trigger: GGCCACGCCGCAGCAGGATATCGGCCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCTGCACGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 90 bp AGAGAGTCAGTGAGGACGATACCCGCTCCAAATGATGGCGGCTCCTaGACCCACCCGCTGCCGGCCACAGGTGCCACACGGACCCCTGCC +
Preference number: 5 (lower is better)
Translates to: RESVRTIPAPNDGGS*THPLPATGATRTPA
Trigger: GGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATCGTCCTCACTGACTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 90 bp CCGGAGCTCCCGTCACACACCCCACCCGCACCCACAGAGAGTCAGTaGGGACGATACCCGCTCCAAATGATGGCGGCTCCTGGACCCACC +
Preference number: 5 (lower is better)
Translates to: PELPSHTPPAPTESQ*GRYPLQMMAAPGPT
Trigger: GGTGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGGGTGCGGGTGGGGTGTGTGACGGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 90 bp ACCAGCTCGTACTGGAAGCCTGTGGTCCTCCGGCCGATATCCTGCTaGGGCGTGGCCTCCACGAACAGGCCGCCCTGCTCCAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: TSSYWKPVVLRPISC*GVASTNRPPCSRPK
Trigger: TTTTGGCCTGGAGCAGGGCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCGGAGGACCACAGGCTTCCAGTACGAGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp ACACCTGCTCCACCTCCTTCCTGTGTGCCTCGTGCGTCAGCCCGCTaGAGAGGAGAGACACTGTCAGCCAGGCCCGGAGCTCCCGTCACA +
Preference number: 5 (lower is better)
Translates to: TPAPPPSCVPRASAR*RGETLSARPGAPVT
Trigger: TGTGACGGGAGCTCCGGGCCTGGCTGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGGAGCAGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 90 bp GCACAGCGCAGATACACCTGCTCCACCTCCTTCCTGTGTGCCTCGTaGGTCAGCCCGCTGCAGAGGAGAGACACTGTCAGCCAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AQRRYTCSTSFLCAS*VSPLQRRDTVSQAR
Trigger: CCGGGCCTGGCTGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 90 bp CGTACTGGAAGCCTGTGGTCCTCCGGCCGATATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGCCCTGCTCCAGGCCAAAACACTGCA +
Preference number: 5 (lower is better)
Translates to: RTGSLWSSGRYPAAA*PPRTGRPAPGQNTA
Trigger: TGCAGTGTTTTGGCCTGGAGCAGGGCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCGGAGGACCACAGGCTTCCAGTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ACGGCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TAPPGPQRPPQPVTHQERRLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...CCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp CGCAGGTGGATGGCTGAGTCCTGCCGCTCAGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACGGCGAAGTCGCTGGTGCAGACGGCT +
Preference number: 5 (lower is better)
Translates to: RRWMAESCRSGSWVT*WMEPRTAKSLVQTA
Trigger: AGCCGTCTGCACCAGCGACTTCGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCACCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp CCTCGGGCACCGGCTCGAAGACCCTGCTTTTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGGCTGAGTCCTGCCGCTCAGGCTCGT +
Preference number: 5 (lower is better)
Translates to: PRAPARRPCFSADRV*SRAGGWLSPAAQAR
Trigger: ACGAGCCTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGGTGCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp ACCCGCCGCACAGCGCAGATACACCTGCTCCACCTCCTTCCTGTGTaGCTCGTGCGTCAGCCCGCTGCAGAGGAGAGACACTGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TRRTAQIHLLHLLPV*LVRQPAAEERHCQP
Trigger: TGGCTGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGGAGCAGGTGTATCTGCGCTGTGCGGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCAGGCTCGTGGGTAACTaGCTGGATGGAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGRLVGN*LDGASN
Trigger: GTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCT...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCCCCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 5 (lower is better)
Translates to: APPGPQRPPQPVTHQERKWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...CTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS GCA 90 bp TTGGCCCCCGAGGAGTCCGTGAAGGACCTGATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTGTTGGGCCGCAGGTTAACGATGAGA +
Preference number: 5 (lower is better)
Translates to: LAPEESVKDLMHTVR*RAGEKVLGRRLTMR
Trigger: TCTCATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCATCAGGTCCTTCACGGACTCCTCGGGGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 90 bp TTCCAGATGACCACGAGGGCTGGGACGCTAGAGGTAAAGCGAAGGTaGGGCCCCACCACGTGTGAAGGAGGAGCCCTGGGATGCAACCTG +
Preference number: 5 (lower is better)
Translates to: FQMTTRAGTLEVKRR*GPTTCEGGALGCNL
Trigger: CAGGTTGCATCCCAGGGCTCCTCCTTCACACGTGGTGGGGCCCCACCTTCGCTTTACCTCTAGCGTCCCAGCCCTCGTGGTCATCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GGTCAGGCCTGGGCCCAGGGCATGCGGCTCCCAGCGCGCGGCCCTCACCGCACGTTAAGACACGGGAATTaGTTTCCTATGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: GQAWAQGMRLPARGPHRTLRHGN*FPMDIS
Trigger: AGAAATGTCCATAGGAAACAAATTCCCGTGTCTTAA...CGTGCGGTGAGGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS TCA 90 bp CCTGCTTTTCTGCCGATAGAGTCTGCTCACGCGCAGGTGGATGGCTaGGTCCTGCCGCTCAGGCTCGTGGGTAACTTGCTGGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: PAFLPIESAHAQVDG*VLPLRLVGNLLDGA
Trigger: GGCTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS CCA 90 bp AGGCGAGAAGGTGTTGGGCCGCAGGTTAACGATGAGAGCACCTGTTaGGTACATCCACTCCACGGCACCCGCCGCACAGCGCAGATACAC +
Preference number: 5 (lower is better)
Translates to: RREGVGPQVNDESTC*VHPLHGTRRTAQIH
Trigger: GTGTATCTGCGCTGTGCGGCGGGTGCCGTGGAGTGGATGTACCCAACAGGTGCTCTCATCGTTAACCTGCGGCCCAACACCTTCTCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 90 bp CGGAGTCAGTCCGTGCCAACCTCACAAGGGTTCAGCCCCCTCTCCTaGGCATCCCTGTACATCCTCTGGAAGTCCTTGAAGCGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: RSQSVPTSQGFSPLS*ASLYILWKSLKRGA
Trigger: TGCCCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGATGCCCAGGAGAGGGGGCTGAACCCTTGTGAGGTTGGCACGGACTGACTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp TCACACATCCACTGTGCCCAACGGCCAGTGCTTCACCCAACCGCAGGCCAGATGGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATG +
Preference number: 5 (lower is better)
Translates to: SHIHCAQRPVLHPTAGQMAGEKV*GRRLTM
Trigger: CATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGC...CATCTGGCCTGCGGTTGGGTGAAGCACTGGCCGTTGGGCACAGTGGATGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CAA 90 bp AGCCGCATCCTTTGGGGACATGGGGTCACCAACCTGGGTTCAGACCAGCTCCTGAGAGTGCCTGAGCATTaGGCAAGGCCGGCATGGTGC +
Preference number: 5 (lower is better)
Translates to: SRILWGHGVTNLGSDQLLRVPEH*ARPAWC
Trigger: GCACCATGCCGGCCTTGCCAAATGCTCAGGCACTCT...CAGGAGCTGGTCTGAACCCAGGTTGGTGACCCCATGTCCCCAAAGGATGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS GCA 90 bp TCAAGAGTCTGCGCCTCTGCTGCCGTAGCGTCAAACACCAATCTCTaGGATGTCCCTGAATCAGGGTGGCTGGAGGTGCTGGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SRVCASAAVASNTNL*DVPESGWLEVLGQW
Trigger: CCACTGCCCCAGCACCTCCAGCCACCCTGATTCAGGGACATCGCAGAGATTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCTTCTGGCTGGTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGCATGGGGCCCAGCGTTaGCAGATGGGGGACCAGCAT +
Preference number: 5 (lower is better)
Translates to: ASGWSDPRLYSRERKQPAHGAQR*QMGDQH
Trigger: ATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATG...CGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGACCAGCCAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAGAGCAAGGAGGAGCCTaGCCAACTCCCCTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: ASDLSWVSLTALAAPGGREQGGA*PTPLPL
Trigger: TAAGGGGAGGGGAGTTGGCAAGGCTCCTCCTTGCTC...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS CCA 90 bp TCACGGAGTATCACAGGAATGCCAGCAGGCCCTGTGTACCAACCCTaGTTCCAGATGACCACGAGGGCTGGGACGCTAGAGGTAAAGCGA +
Preference number: 5 (lower is better)
Translates to: SRSITGMPAGPVYQP*FQMTTRAGTLEVKR
Trigger: TCGCTTTACCTCTAGCGTCCCAGCCCTCGTGGTCATCTGGAACCAGGGTTGGTACACAGGGCCTGCTGGCATTCCTGTGATACTCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CCACCAGGACCGCAGCGCCCACCGCAGCCTGTGACTCATCAGGAGAGGAAGGGCTCTCAAAGTAATGACTaGACCGTTTTCTGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: PPGPQRPPQPVTHQERKGSQSND*TVFCKP
Trigger: AGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGA...GCCCTTCCTCTCCTGATGAGTCACAGGCTGCGGTGGGCGCTGCGGTCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp GCCTCTGACTTGTCTTGGGTAAGTCTCACTGCTCTTGCAGCACCTGGGGGACGAACTCAGAGAACGAGGTaGTTTCAGCCCCGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: ASDLSWVSLTALAAPGGRTQRTR*FQPRSR
Trigger: CCGACTGCGGGGCTGAAACAACCTCGTTCTCTGAGT...TCGTCCCCCAGGTGCTGCAAGAGCAGTGAGACTTACCCAAGACAAGTCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTGTGGACACTTTCTGTTaGGTAAGCTTTGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQLPWGPAFADGGPAWSCVDTFC*VSFAFP
Trigger: GGGGAAGGCAAAGCTTACCAAACAGAAAGTGTCCAC...ACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp ATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGACCAAAGCTCATCCTTTCTGGAGGGGAAGCAGTaGCTGTCCGGTGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ILGNGNNRRPEKDQSSSFLEGKQ*LSGAGG
Trigger: CCCACCTGCACCGGACAGCAACTGCTTCCCCTCCAG...AAAGGATGAGCTTTGGTCCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp GTCGGATCCTCGTCTTTATTCTCGGGAACGGAAACAACCGGCGGCCTGAAAAGGGCCCACACCGTGACTTaGGATTGTGGCCTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VGSSSLFSGTETTGGLKRAHTVT*DCGLRN
Trigger: GTTCCTGAGGCCACAATCCAAAGTCACGGTGTGGGC...CCTTTTCAGGCCGCCGGTTGTTTCCGTTCCCGAGAATAAAGACGAGGATCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp TCACAGCTCCCATGGGGCCCAGCGTTTGCAGATGGGGGACCAGCATGGAGCTGTTCCAAAGCCTCTGACTaGTCTTGGGTAAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: SQLPWGPAFADGGPAWSCSKASD*SWVSLT
Trigger: AGTGAGACTTACCCAAGACAAGTCAGAGGCTTTGGA...ACAGCTCCATGCTGGTCCCCCATCTGCAAACGCTGGGCCCCATGGGAGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp AGTGCTTCACCCAACCGCAGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAATGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 5 (lower is better)
Translates to: SASPNRRPDAVTPNVFREWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...TTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS-3UTR CAA 90 bp AGTGCTTCACCCAACCGCAGGCCAGATGCCGTGACTCCTAACGTCTTTAGAGAACGACGGCCTTTCTGGTaGCTCTCCGGGGATGAGTTA +
Preference number: 5 (lower is better)
Translates to: SASPNRRPDAVTPNVFRERRPFW*LSGDEL
Trigger: TAACTCATCCCCGGAGAGCAACCAGAAAGGCCGTCG...TTCTCTAAAGACGTTAGGAGTCACGGCATCTGGCCTGCGGTTGGGTGAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp TTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 5 (lower is better)
Translates to: FYSISNRPGHPWLEAHGVWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...AACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTCGGCCAGGGCATCCTaGGCTGGAAGCTCATGGGGT +
Preference number: 5 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKSARAS*AGSSWG
Trigger: ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp CATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGACAATGCAGGCTGCGTaGCAATCCGACGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: HFTAFPIGQGILGWKLMGTMQAA*QSDGLS
Trigger: AGAAAGGCCGTCGGATTGCAACGCAGCCTGCATTGT...CCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633913.1
CDS-3UTR CAA 90 bp CTTAGTTTGCATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGTGGAAGCTCATGGGGTaGAGTGTGGCGAGAACGTCC +
Preference number: 5 (lower is better)
Translates to: LSLHFTAFPIGQGILGWKWKLMG*SVARTS
Trigger: GGACGTTCTCGCCACACTCAACCCCATGAGCTTCCA...CTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAATGCAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320095.12
ENST00000571814.1
ENST00000574053.1
ENST00000633913.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ATTTTACAGCATTTCCAATCGGCCAGGGCATCCTTGGCTGGAAGCTCATGGGGTTCTCAAAGTAATGACTaGACCGTTTTCTGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: ILQHFQSARASLAGSSWGSQSND*TVFCKP
Trigger: AGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGA...ACCCCATGAGCTTCCAGCCAAGGATGCCCTGGCCGATTGGAAATGCTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 90 bp ACCTCATTAAGCATAGATGTTTGTACATTTCTCAAAGTAATGACTTaGCCGTTTTCTGCAAGCCTGAAGACCCTGCACTGCCGACGGTAT +
Preference number: 5 (lower is better)
Translates to: TSLSIDVCTFLKVMT*PFSASLKTLHCRRY
Trigger: ATACCGTCGGCAGTGCAGGGTCTTCAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGAAATGTACAAACATCTATGCTTAATGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 90 bp CATAGATGTTTGTACATTTCTCAAAGTAATGACTTGACCGTTTTCTaGAAGCCTGAAGACCCTGCACTGCCGACGGTATTTGTAAATATA +
Preference number: 5 (lower is better)
Translates to: HRCLYISQSNDLTVF*KPEDPALPTVFVNI
Trigger: TATATTTACAAATACCGTCGGCAGTGCAGGGTCTTCAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGAAATGTACAAACATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS-3UTR CAA 90 bp ACTTCCGTCATGAGAATAACAACTCTGAATGGCACCTTTTCACACATCCACTGTTTAAGACACGGGAATTaGTTTCCTATGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: TSVMRITTLNGTFSHIHCLRHGN*FPMDIS
Trigger: AGAAATGTCCATAGGAAACAAATTCCCGTGTCTTAA...ACAGTGGATGTGTGAAAAGGTGCCATTCAGAGTTGTTATTCTCATGACGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS CCA 72 bp GCGTCAGCCCGCTCCCCTTCCAGCTGCACCGGTCGCTaGAGTACTGCGCGCCCGCGCCGCCCAGCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: ASARSPSSCTGR*STARPRRPAAR
Trigger: CCGGGCTGCTGGGCGGCGCGGGCGCGCAGTACTCCAGCGACCGGTGCAGCTGGAAGGGGAGCGGGCTGACGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320095.12
ENST00000633913.1
CDS TCA 72 bp CATGCCCCGGCCGCACGCCACACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGCCGTCACCCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: HAPAARHTPAAS*RAPASGRHPRA
Trigger: TGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGTGTGGCGTGCGGCCGGGGCATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS TCA 72 bp CACAGCCGAGCCGCGCGCCACACTCCAGCAGCGTCCTaGCGCGCCCCTGCCAGTGGCCGTCACCCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: HSRAARHTPAAS*RAPASGRHPRA
Trigger: TGCCCGAGGGTGACGGCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGTGTGGCGCGCGGCTCGGCTGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574053.1
ENST00000633735.1
CDS TCA 72 bp GCTGCCGGCCACAGGTGCCACACGGACCCCTGCCCGTaGGGCAGGCCGGCGCCATCTCCGCCCTTCGGCACA +
Preference number: 6 (lower is better)
Translates to: AAGHRCHTDPCP*GRPAPSPPFGT
Trigger: TGTGCCGAAGGGCGGAGATGGCGCCGGCCTGCCTCACGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp CCGCTCCAAATGATGGCGGCTCCTGGACCCACCCGCTaGCGGCCACAGGTGCCACACGGACCCCTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: PLQMMAAPGPTR*RPQVPHGPLPV
Trigger: CACGGGCAGGGGTCCGTGTGGCACCTGTGGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATTTGGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 72 bp AGCCGAGCCGCGCCTCCCCGAAGTGCATGTGGCCAGTaGAGAGGAAGTCGCCATGCCCCGGCCGCACGCCAC +
Preference number: 6 (lower is better)
Translates to: SRAAPPRSACGQ*RGSRHAPAARH
Trigger: GTGGCGTGCGGCCGGGGCATGGCGACTTCCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCGGCTCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp AGATACACCTGCTCCACCTCCTTCCTGTGTGCCTCGTaGGTCAGCCCGCCGGCCGCGCTGCAGGCGCGCCTC +
Preference number: 6 (lower is better)
Translates to: RYTCSTSFLCAS*VSPPAALQARL
Trigger: GAGGCGCGCCTGCAGCGCGGCCGGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGGAGCAGGTGTATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570778.5
ENST00000616599.2
CDS GCA 72 bp GCTTCCTCGAAGGGCAGACACTCCCCACAGCTCTGCTaGCCACTTCCCTGGGTCGCGACGGCAGCGGCACCC +
Preference number: 6 (lower is better)
Translates to: ASSKGRHSPQLC*PLPWVATAAAP
Trigger: GGGTGCCGCTGCCGTCGCGACCCAGGGAAGTGGGCAGCAGAGCTGTGGGGAGTGTCTGCCCTTCGAGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571940.1
CDS CCA 72 bp AGCCTGTGGTCCTCCGGCCGATATCCTGCTGCGGCGTaGCCTCCACGAACAGGCCGCCCTGCTCCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: SLWSSGRYPAAA*PPRTGRPAPGQ
Trigger: TTGGCCTGGAGCAGGGCGGCCTGTTCGTGGAGGCCACGCCGCAGCAGGATATCGGCCGGAGGACCACAGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 72 bp CAGTTCCTTCCAGTGCACCTGCACCAAGAGCCATGGTaGGGCGGGGCCGAGCTCCCGGGAGTGCAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: QFLPVHLHQEPW*GGAELPGVQAV
Trigger: CACCGCCTGCACTCCCGGGAGCTCGGCCCCGCCCCACCATGGCTCTTGGTGCAGGTGCACTGGAAGGAACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 72 bp ACCCAGTTCCTTCCAGTGCACCTGCACCAAGAGCCATaGTGGGGCGGGGCCGAGCTCCCGGGAGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: TQFLPVHLHQEP*WGGAELPGVQA
Trigger: CGCCTGCACTCCCGGGAGCTCGGCCCCGCCCCACCATGGCTCTTGGTGCAGGTGCACTGGAAGGAACTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp AGGAGAGGAAGGGCAGCGGCCCACGGAGTCAGTCCGTaGCAACCTCACAAGGGTTCAGCCCCCTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RRGRAAAHGVSP*QPHKGSAPSPG
Trigger: CCCAGGAGAGGGGGCTGAACCCTTGTGAGGTTGGCACGGACTGACTCCGTGGGCCGCTGCCCTTCCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp CCACCTCCTTCCTGTGTGCCTCGTGCGTCAGCCCGCTaGAGAGGAGAGACACTGTCAGCCAGGCCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: PPPSCVPRASAR*RGETLSARPGA
Trigger: AGCTCCGGGCCTGGCTGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 72 bp CCACAGAGAGTCAGTGAGGACGATACCCGCTCCAAATaGTGGCGGCTCCTGGACCCACCCGCTGCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: PQRVSEDDTRSK*WRLLDPPAAGH
Trigger: GTGGCCGGCAGCGGGTGGGTCCAGGAGCCGCCATCATTTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 72 bp GGCATCCCTGTACATCCTCTGGAAGTCCTTGAAGCGTaGGGCACAGCCGAGCCGCGCGCCACACTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GIPVHPLEVLEA*GTAEPRATLQQ
Trigger: CTGCTGGAGTGTGGCGCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGATGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574053.1
ENST00000633735.1
CDS TCA 72 bp TCTCCTGGGCATCCCTGTACATCCTCTGGAAGTCCTTaGAGCGTGGGGCACAGCCGAGCCGCGCGCCACACT +
Preference number: 6 (lower is better)
Translates to: SPGHPCTSSGSP*SVGHSRAARHT
Trigger: AGTGTGGCGCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTCCAGAGGATGTACAGGGATGCCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574053.1
ENST00000633735.1
CDS GCA 72 bp GAGGAGTCCGTGAAGGACCTGATGCACACGGTCAGGTaGCGGGCAGGCGAGAAGGTGTTGGGCCGCAGGTTA +
Preference number: 6 (lower is better)
Translates to: EESVKDLMHTVR*RAGEKVLGRRL
Trigger: TAACCTGCGGCCCAACACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCATCAGGTCCTTCACGGACTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp AGTGGCCGTCACCCTCGGGCACCGGCTCGAAGACCCTaGTTTTCTGCCGATAGAGTCTGCTCACGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: SGRHPRAPARRP*FSADRVCSRAG
Trigger: ACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGGTGCCCGAGGGTGACGGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS CCA 72 bp GGTGTTGGGCCGCAGGTTAACGATGAGAGCACCTGTTaGGTACATCCACTCCACGGCACCCGCCGCACAGCG +
Preference number: 6 (lower is better)
Translates to: GVGPQVNDESTC*VHPLHGTRRTA
Trigger: CGCTGTGCGGCGGGTGCCGTGGAGTGGATGTACCCAACAGGTGCTCTCATCGTTAACCTGCGGCCCAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 72 bp AGGTCCGACGCCCTGTGCCTCCTAACCAGCTCGTACTaGAAGCCTGTGGTCCTCCGGCCGATATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSDALCLLTSSY*KPVVLRPISCC
Trigger: GCAGCAGGATATCGGCCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS CCA 72 bp GCTGAGTCCTGCCGCTCAGGCTCGTGGGTAACTTGCTaGATGGAGCCTCGAACGGCGAAGTCGCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: AESCRSGSWVTC*MEPRTAKSLVQ
Trigger: CTGCACCAGCGACTTCGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCAGGACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS TCA 72 bp CTGCCGATAGAGTCTGCTCACGCGCAGGTGGATGGCTaGGTCCTGCCGCTCAGGCTCGTGGGTAACTTGCTG +
Preference number: 6 (lower is better)
Translates to: LPIESAHAQVDG*VLPLRLVGNLL
Trigger: CAGCAAGTTACCCACGAGCCTGAGCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS TCA 72 bp CCGTCACACACCCCACCCGCACCCACAGAGAGTCAGTaGGGACGATACCCGCTCCAAATGATGGCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PSHTPPAPTESQ*GRYPLQMMAAP
Trigger: AGGAGCCGCCATCATTTGGAGCGGGTATCGTCCTCACTGACTCTCTGTGGGTGCGGGTGGGGTGTGTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp ATGGCTGAGTCCTGCCGCTCAGGCTCGTGGGTAACTTaGTGGATGGAGCCTCGAACGGCGAAGTCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: MAESCRSGSWVT*WMEPRTAKSLV
Trigger: CACCAGCGACTTCGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCAGGACTCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp CCGGCTCGAAGACCCTGCTTTTCTGCCGATAGAGTCTaGTCACGCGCAGGTGGATGGCTGAGTCCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: PARRPCFSADRV*SRAGGWLSPAA
Trigger: AGCGGCAGGACTCAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000571940.1
ENST00000574053.1
ENST00000616599.2
ENST00000633735.1
ENST00000633913.1
ENST00000634158.1
CDS CAA 72 bp ATGCACACGGTCAGGTGCCGGGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATGAGAGCACCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: MHTVRCRAGEKV*GRRLTMRAPVG
Trigger: CCCAACAGGTGCTCTCATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp AGATACACCTGCTCCACCTCCTTCCTGTGTGCCTCGTaGGTCAGCCCGCTGCAGAGGAGAGACACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: RYTCSTSFLCAS*VSPLQRRDTVS
Trigger: GCTGACAGTGTCTCTCCTCTGCAGCGGGCTGACGCACGAGGCACACAGGAAGGAGGTGGAGCAGGTGTATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 72 bp TGTGTACCAACCCTGGTTCCAGATGACCACGAGGGCTaGGACGCTAGAGGTAAAGCGAAGGTGGGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: CVPTLVPDDHEG*DARGKAKVGPH
Trigger: GTGGGGCCCCACCTTCGCTTTACCTCTAGCGTCCCAGCCCTCGTGGTCATCTGGAACCAGGGTTGGTACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CAA 90 bp AAGGACCTGATGCACACGGTCAGGTGCCGGGCAGGCGAGAAGGTGTaGGGCCGCAGGTTAACGATGAGAGCACCTGTTGGGTACATCCAC +
Preference number: 6 (lower is better)
Translates to: KDLMHTVRCRAGEKV*GRRLTMRAPVGYIH
Trigger: GTGGATGTACCCAACAGGTGCTCTCATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGCCCGGCACCTGACCGTGTGCATCAGGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320095.12
ENST00000570778.5
ENST00000571814.1
ENST00000616599.2
ENST00000633913.1
ENST00000634158.1
CDS GCA 72 bp TGCGCCTCTGCTGCCGTAGCGTCAAACACCAATCTCTaGGATGTCCCTGAATCAGGGTGGCTGGAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CASAAVASNTNL*DVPESGWLEVL
Trigger: CAGCACCTCCAGCCACCCTGATTCAGGGACATCGCAGAGATTGGTGTTTGACGCTACGGCAGCAGAGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp CCAGGCCCTCCAGACACCCTCCAACACTCAAGAGTCTaGGCCTCTGCTGCCGTAGCGTCAAACACCAATCTC +
Preference number: 6 (lower is better)
Translates to: PGPPDTLQHSRV*ASAAVASNTNL
Trigger: GAGATTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTTGAGTGTTGGAGGGTGTCTGGAGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CCA 72 bp TCAAACACCAATCTCTGCGATGTCCCTGAATCAGGGTaGCTGGAGGTGCTGGGGCAGTGGGATGGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: SNTNLCDVPESG*LEVLGQWDGAP
Trigger: TGGGGCTCCATCCCACTGCCCCAGCACCTCCAGCCACCCTGATTCAGGGACATCGCAGAGATTGGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp AGACACCCTCCAACACTCAAGAGTCTGCGCCTCTGCTaGCGTAGCGTCAAACACCAATCTCTGCGATGTCCC +
Preference number: 6 (lower is better)
Translates to: RHPPTLKSLRLC*RSVKHQSLRCP
Trigger: GGGACATCGCAGAGATTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTTGAGTGTTGGAGGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp TCCAGACACCCTCCAACACTCAAGAGTCTGCGCCTCTaGTGCCGTAGCGTCAAACACCAATCTCTGCGATGT +
Preference number: 6 (lower is better)
Translates to: SRHPPTLKSLRL*CRSVKHQSLRC
Trigger: ACATCGCAGAGATTGGTGTTTGACGCTACGGCAGCAGAGGCGCAGACTCTTGAGTGTTGGAGGGTGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS GCA 72 bp TGGATTCCTCCAGAATATCACGGAGTATCACAGGAATaGCAGCAGGCCCTGTGTACCAACCCTGGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: WIPPEYHGVSQE*QQALCTNPGSR
Trigger: TCTGGAACCAGGGTTGGTACACAGGGCCTGCTGGCATTCCTGTGATACTCCGTGATATTCTGGAGGAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CAA 90 bp CACCTCATTAAGCATAGATGTTTGTACATTTCTCAAAGTAATGACTaGACCGTTTTCTGCAAGCCTGAAGACCCTGCACTGCCGACGGTA +
Preference number: 6 (lower is better)
Translates to: HLIKHRCLYISQSND*TVFCKPEDPALPTV
Trigger: TACCGTCGGCAGTGCAGGGTCTTCAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGAAATGTACAAACATCTATGCTTAATGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS TCA 72 bp AGCATAGATGTTTGTACATTTCTCAAAGTAATGACTTaGCCGTTTTCTGCAAGCCTGAAGACCCTGCACTGC +
Preference number: 6 (lower is better)
Translates to: SIDVCTFLKVMT*PFSASLKTLHC
Trigger: GCAGTGCAGGGTCTTCAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGAAATGTACAAACATCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1
CDS CAA 72 bp AAGCATAGATGTTTGTACATTTCTCAAAGTAATGACTaGACCGTTTTCTGCAAGCCTGAAGACCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: KHRCLYISQSND*TVFCKPEDPAL
Trigger: CAGTGCAGGGTCTTCAGGCTTGCAGAAAACGGTCAAGTCATTACTTTGAGAAATGTACAAACATCTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571814.1
ENST00000634158.1