RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METRN (Homo sapiens)

Ensembl gene IDs: ENSG00000103260

Ensembl transcript IDs: ENST00000219542.3, ENST00000564661.1, ENST00000567076.5, ENST00000568223.7, ENST00000568415.1, ENST00000570132.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGCACGGGCAGCCTCGTAGGCACGGCGGAACTCCTGGAATCGTaGGGCACAGCCCAGCCGGGCCTCCCCAAAGCGGCTCCAGCCCAT +
Preference number: 1 (lower is better)
Translates to: GSTGSLVGTAELLES*GTAQPGLPKAAPAH
Trigger: ATGGGCTGGAGCCGCTTTGGGGAGGCCCGGCTGGGCTGTGCCCCACGATTCCAGGAGTTCCGCCGTGCCTACGAGGCTGCCCGTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR CCA 90 bp GGAGGGGCAGAAGGTGGGAGAACCCCCACAGTGCATGACACCCAGTaGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: GGAEGGRTPTVHDTQ*LRSSPILISPAAGR
Trigger: CCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCCCACCTTCTGCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 90 bp GGGCAGAAGGTGGGAGAACCCCCACAGTGCATGACACCCAGTGGCTaGGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGAT +
Preference number: 1 (lower is better)
Translates to: GQKVGEPPQCMTPSG*APHPSSSALRQAGD
Trigger: ATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCCCACCTTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 90 bp CTGCGCCCAACCTCCCCACTCCTCTCCCGTCCACACCAGGCACTCTaGTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTG +
Preference number: 1 (lower is better)
Translates to: LRPTSPLLSRPHQAL*CLAFGHSAATCTCV
Trigger: CACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGGAGTGGGGAGGTTGGGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 90 bp CTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTaGAGCCACCTGTACCTGTGTGAACTGGCACTTGCCTGGCGGTGT +
Preference number: 1 (lower is better)
Translates to: LPSTPGTLLLGLWAL*SHLYLCELALAWRC
Trigger: ACACCGCCAGGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp TGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTGAACTaGCACTTGCCTGGCGGTGTCTGTGATCCACAGGCCCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: CLAFGHSAATCTCVN*HLPGGVCDPQAPGS
Trigger: GGAGCCTGGGGCCTGTGGATCACAGACACCGCCAGGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp CCCACTCCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTaGGCACTCTGCAGCCACCTGTACCTGTGTGAACTGGCACTTGCC +
Preference number: 1 (lower is better)
Translates to: PTPLPSTPGTLLLGL*ALCSHLYLCELALA
Trigger: GGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGGAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 90 bp CCCTATCTCCCATGCCACTTTGGCCACCTGTCCCCAGGGCAGGCATaGAGCCCCTGGTCTAATGCTCCAAGACCCATTTGGGCACCGTGG +
Preference number: 1 (lower is better)
Translates to: PYLPCHFGHLSPGQA*SPWSNAPRPIWAPW
Trigger: CCACGGTGCCCAAATGGGTCTTGGAGCATTAGACCAGGGGCTTCATGCCTGCCCTGGGGACAGGTGGCCAAAGTGGCATGGGAGATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 90 bp TCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTaGACTGGCACTTGCCTGGCGGTGTCTGTGATCCACAGGCCCCAG +
Preference number: 1 (lower is better)
Translates to: SAAWPLGTLQPPVPV*TGTCLAVSVIHRPQ
Trigger: CTGGGGCCTGTGGATCACAGACACCGCCAGGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp AGCCAGGGTTCGGCCAGGGCCCAGCCCAGGGTGTTTGTGAACAGGTaGACTTGGGTGTGGCTGAAAAGGAGAGGTTGTAGGAAGCTGGCC +
Preference number: 1 (lower is better)
Translates to: SQGSARAQPRVFVNR*TWVWLKRRGCRKLA
Trigger: GGCCAGCTTCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCTGGCCGAACCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 90 bp TGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTaGCAATGGGGCCAGTGGCGGGAAACGGTCCTTAGAGACCCCATT +
Preference number: 1 (lower is better)
Translates to: WPFMRLKGRGGRRRQ*QWGQWRETVLRDPI
Trigger: AATGGGGTCTCTAAGGACCGTTTCCCGCCACTGGCCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp AATTGGAGCCATCCTCACAGCTGCGAGGCAGGCCCAAGGCTGGGCTaGACACAGGAGACCAGGTCCACAGCAGCTTGCGTGAACAGAGTT +
Preference number: 1 (lower is better)
Translates to: NWSHPHSCEAGPRLG*TQETRSTAACVNRV
Trigger: AACTCTGTTCACGCAAGCTGCTGTGGACCTGGTCTCCTGTGTCCAGCCCAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATGGCTCCAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp TGGTCAGGGCTGAAGATGAAAAAGTGGAGGTTGTCCAAGGGTTATTaGAGGCTGCCCCAGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCG +
Preference number: 1 (lower is better)
Translates to: WSGLKMKKWRLSKGY*RLPQRSGPVPEPSA
Trigger: CGCTGAGGGCTCAGGCACAGGACCGCTCCTCTGGGGCAGCCTCCAATAACCCTTGGACAACCTCCACTTTTTCATCTTCAGCCCTGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp GCCAGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTaGCTGAAAAGGAGAGGTTGTAGGAAGCTGGCCAGAGAATCAGGG +
Preference number: 1 (lower is better)
Translates to: ARAQPRVFVNRWTWV*LKRRGCRKLARESG
Trigger: CCCTGATTCTCTGGCCAGCTTCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 90 bp GGTTCGGCCAGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTaGGTGTGGCTGAAAAGGAGAGGTTGTAGGAAGCTGGCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: GSARAQPRVFVNRWT*VWLKRRGCRKLARE
Trigger: TTCTCTGGCCAGCTTCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCTGGCCGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 90 bp GCAGCGGCCCCTCCCCGGAATGTGGGTGTAGCTCCTCCTGACATCTaGTCTCCCTCTCAGTTGCCAAATGGTCTTGAACAAGATACCATT +
Preference number: 1 (lower is better)
Translates to: AAAPPRNVGVAPPDI*SPSQLPNGLEQDTI
Trigger: AATGGTATCTTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCAGATGTCAGGAGGAGCTACACCCACATTCCGGGGAGGGGCCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 90 bp CAAGGCTGGGCTGGACACAGGAGACCAGGTCCACAGCAGCTTGCGTaGACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGG +
Preference number: 1 (lower is better)
Translates to: QGWAGHRRPGPQQLA*TEFLLIVPSPPKQW
Trigger: CCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCAAGCTGCTGTGGACCTGGTCTCCTGTGTCCAGCCCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp CCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCGCAGCTCAGCGTCGCTaGAGGGCCTGCAGGCACCGT +
Preference number: 2 (lower is better)
Translates to: PDRPAWNSGGVWRRTRAAAAQRR*RACRHR
Trigger: ACGGTGCCTGCAGGCCCTGCAGCGACGCTGAGCTGC...GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
3UTR-3UTR CCA 90 bp GCCCAGCCGGGCCTCCCCAAAGCGGCTCCAGCCCATGAAGAGGAAGGTGCCTGGAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: AQPGLPKAAPAHEEEGAWNSGGV*RRTRAA
Trigger: GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT...CCAGGCACCTTCCTCTTCATGGGCTGGAGCCGCTTTGGGGAGGCCCGGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR-3UTR GCA 90 bp AGGGTAAGTCTCTTGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGAGGTGACGGGAAGTCGGCACCCTaGCAGCCTGCAGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: RVSLLHVQWKSQGGAGGDGKSAP*QPAAPS
Trigger: GGAAGGGGCTGCAGGCTGGCAGGGTGCCGACTTCCC...GTCACCTCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR TCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGGACGGGGCCAAGGATaGCTCTGCGGGCTCACAGCA +
Preference number: 2 (lower is better)
Translates to: RPHQALCCLAFGHSAATCGRGQG*LCGLTA
Trigger: TGCTGTGAGCCCGCAGAGTCATCCTTGGCCCCGTCC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR TCA 90 bp CCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCAACCCCCACAGTGCATaGCACCCAGTGGCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: PLPSTPGTLLLGLWALCSNPHSA*HPVAAL
Trigger: GAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTT...GCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp GTGGGCAGCACGGGCAGCCTCGTAGGCACGGCGGAACTCCTGGAATCGTGGGGCGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTG +
Preference number: 2 (lower is better)
Translates to: VGSTGSLVGTAELLESWGVMTDS*SSTSWV
Trigger: CACCCATGACGTGGAGCTGCAGGAGTCTGTCATCAC...GCCCCACGATTCCAGGAGTTCCGCCGTGCCTACGAGGCTGCCCGTGCTGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR-3UTR GCA 90 bp ACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTGAACTGGTGCAGGTCCCCACGTaGCCCCCACCCAGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: TLLLGLWALCSHLYLCELVQVPT*PPPSSG
Trigger: GCCGCTGCTGGGTGGGGGGCACGTGGGGACCTGCAC...CAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp AGAGGAAGGTGCCTGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGAATGGTCCCGTGAATTACTGTaGGGAGGCATGTGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: RGRCLGPGGRHSAVGYEWSRELL*GGMWLR
Trigger: CCGCAGCCACATGCCTCCCCACAGTAATTCACGGGA...CCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR-3UTR CCA 90 bp CGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATTGCAGCTCCACGTCATaGGTGACCCCATGGATGATC +
Preference number: 2 (lower is better)
Translates to: RLEQRRCLAEDTGGHHSDCSSTS*VTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCA...ATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
3UTR-3UTR CCA 90 bp CCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGGGCAAGGACGGGGCTaGTGGGTGCAGCAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PTVHDTQWLRSSPILISPGQGRG*WVQQSR
Trigger: TCTGCTCTGCTGCACCCACCAGCCCCGTCCTTGCCC...AGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGGCACGGGAGGCAAGTaGGAGCCAGCCAGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RPHQALCCLAFGHSAATCGTGGK*EPAREA
Trigger: TGCTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 90 bp AGATACCATTCCCCTGAGCCTCAGTCTCCCGCCAGGAGGCAGGAATaGGAGCCATCCTCACAGCTGCGAGGCAGGCCCAAGGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RYHSPEPQSPARRQE*EPSSQLRGRPKAGL
Trigger: CAGCCCAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATGGCTCCAATTCCTGCCTCCTGGCGGGAGACTGAGGCTCAGGGGAATGGTATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 90 bp TCAGCCCTGCGGCAGGCAGGTGATCTGTGTGAAAGGGTAAGTCTCTaGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGAGGTGACCCC +
Preference number: 2 (lower is better)
Translates to: SALRQAGDLCERVSL*HVQWKSQGGAGGDP
Trigger: GGGGTCACCTCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCTTTCACACAGATCACCTGCCTGCCGCAGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp GGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCTGCGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTG +
Preference number: 2 (lower is better)
Translates to: GGVWRRTRAATTVMTDSCVMTDS*SSTSWV
Trigger: CACCCATGACGTGGAGCTGCAGGAGTCTGTCATCAC...GCAGGAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
3UTR-3UTR CCA 90 bp CATGAAGAGGAAGGTGCCTGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGTGCAGCTCCACGTCATaGGTGACCCCATGGATGATC +
Preference number: 2 (lower is better)
Translates to: HEEEGAWARVDATAQWGTCSSTS*VTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCA...CGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR-3UTR CCA 90 bp ACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTGAACTGCAGGGCCAGGTGTCCTaGAACACCCCCACCCAGGGG +
Preference number: 2 (lower is better)
Translates to: TLLLGLWALCSHLYLCELQGQVS*NTPTQG
Trigger: CCCCTGGGTGGGGGTGTTCCAGGACACCTGGCCCTG...CAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 90 bp TGCCCACCTGCTCACCCACACTGTCTCCCTATCTCCCATGCCACTTaGGCCACCTGTCCCCAGGGCAGGCATGAAGCCCCTGGTCTAATG +
Preference number: 2 (lower is better)
Translates to: CPPAHPHCLPISHAT*ATCPQGRHEAPGLM
Trigger: CATTAGACCAGGGGCTTCATGCCTGCCCTGGGGACAGGTGGCCAAAGTGGCATGGGAGATAGGGAGACAGTGTGGGTGAGCAGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR TCA 90 bp GGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCTGCAGCCCATGGATGATCCCGTaGATTACTGTGGGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: GVWRRTRAATTVMTDSCSPWMIP*ITVGRH
Trigger: ATGCCTCCCCACAGTAATTCACGGGATCATCCATGG...GCTGCAGGAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR-3UTR TCA 90 bp GCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGACAATGGGGGAGCAGAAGCTTGCATaGGTGCAGGTCCCCACGTGC +
Preference number: 2 (lower is better)
Translates to: ALYAAERPRRKAETVTMGEQKLA*VQVPTC
Trigger: GCACGTGGGGACCTGCACTCATGCAAGCTTCTGCTC...CCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGAGCCATCCTCACAGCTaGGAGGCAGGCCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRSHPHS*EAGPRL
Trigger: CAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATGGCT...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGCTCGCCACGTCTGGATaGTCAGCACGTCGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRLATSG*SARRRG
Trigger: GCCCCTTCGACGTGCTGAGCATCCAGACGTGGCGAG...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp CCTGGTCTAATGCTCCAAGACCCATTTGGGCACCGTGGTGCTCCTGTGGCCCTGTTAGAGACCCCATTGTaGACCCCGCCCGCCGGAAAC +
Preference number: 2 (lower is better)
Translates to: PGLMLQDPFGHRGAPVALLETPL*TPPAGN
Trigger: GTTTCCGGCGGGCGGGGTGCACAATGGGGTCTCTAA...CAGGGCCACAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGCATTAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGCCTGAGCCCTCAGCGTaGCACAGTTGGGAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQPEPSA*HSWERR
Trigger: TCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGG...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGCAGGATCCGAGGGGTTaGGGTGAGAGGAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRQDPRG*GERRQL
Trigger: GAGCTGCCTCCTCTCACCCCAACCCCTCGGATCCTG...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGAAAGGACCGTGTTTGTaGGCCCTGCACAGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLKGPCL*ALHSCV
Trigger: GACACAGCTGTGCAGGGCCCACAAACACGGTCCTTT...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp CCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGTCCACAGAGGGCATaGCACTCATCAGGCATCTGC +
Preference number: 2 (lower is better)
Translates to: PSTPGTLLLGLWALCSHLCPQRA*HSSGIC
Trigger: GCAGATGCCTGATGAGTGCCATGCCCTCTGTGGACA...CAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 90 bp AGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTaGCTCGGCCCACGGGAAAGCCTCTCCAAGACAGGAGTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: RKLARESGQVPKVRG*LGPRESLSKTGVEE
Trigger: CTCCTCCACTCCTGTCTTGGAGAGGCTTTCCCGTGGGCCGAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGTTCCCCCTTGAAAGCTaGGGGCTTCATCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQFPLES*GLHLPG
Trigger: CCCAGGCAGATGAAGCCCCCAGCTTTCAAGGGGGAA...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp AGGGGACCCCACACCCTTCGGGCTCCTCGCCACGTCTGGATGCTCAGCACGTCGAGGTCCACAGCAGCTTaGGTGAACAGAGTTCTTATT +
Preference number: 2 (lower is better)
Translates to: RGPHTLRAPRHVWMLSTSRSTAA*VNRVLI
Trigger: AATAAGAACTCTGTTCACGCAAGCTGCTGTGGACCT...CGACGTGCTGAGCATCCAGACGTGGCGAGGAGCCCGAAGGGTGTGGGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGCATCCTCATCAGCCCTaGGGCAGGCAGGTGATCTGT +
Preference number: 2 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRHPHQP*GRQVIC
Trigger: ACAGATCACCTGCCTGCCGCAGGGCTGATGAGGATG...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGATGGAAAGCCATTTCTaGGGCTCAGCCCAGGGGTCC +
Preference number: 2 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRMESHF*GSAQGS
Trigger: GGACCCCTGGGCTGAGCCCCAGAAATGGCTTTCCAT...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGTTTGCAGAAGTGTTTaGGCTGGGGGCAGATGGATG +
Preference number: 2 (lower is better)
Translates to: RPHQALCCLAFGHSAATCVCRSV*AGGRWM
Trigger: CATCCATCTGCCCCCAGCCCAAACACTTCTGCAAAC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp TGTAGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTTGCTCGGAGAACCCCCACAGTaGATGACACCCAGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: CRKLARESGQVPKVRGLLGEPPQ*MTPSGC
Trigger: GCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCC...GAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGAGAAGACAGCTGGTTaGAAAGCCAGGGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RPHQALCCLAFGHSAATCEKTAG*KARAFS
Trigger: AGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp ACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTGAACTGCGGCCCAGGCGAGAATaGAAAGCCATTTCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: TLLLGLWALCSHLYLCELRPRRE*KAISGA
Trigger: AGCCCCAGAAATGGCTTTCCATTCTCGCCTGGGCCG...CAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR GCA 90 bp CACAGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATTTACGAAGTCGCTGGTaGATGCGGCCAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: HSDDRLLQLHVMGDPMDDLRSRW*MRPGAA
Trigger: AGCTGCTCCTGGCCGCATGCACCAGCGACTTCGTAA...ATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
3UTR-3UTR TCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCGGGTGTAGCTCCTCCTaGCATCTGCTCTCCCTCTCA +
Preference number: 2 (lower is better)
Translates to: THQASASANLEKGPCLWAGCSSS*HLLSLS
Trigger: TGAGAGGGAGAGCAGATGTCAGGAGGAGCTACACCC...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CCA 90 bp CACAGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATGAATTACGAAGTCGCTaGTGCATGCGGCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: HSDDRLLQLHVMGDPMDDELRSR*CMRPGA
Trigger: TGCTCCTGGCCGCATGCACCAGCGACTTCGTAATTC...ATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
3UTR-3UTR TCA 90 bp CGGAGCCTTGGGCTGTGGCTGTCCCAAACCTCACTGGCCCTTTATGCGGCTGAACCACAGCAGCTTGCGTaGACAGAGTTCTTATTGATA +
Preference number: 2 (lower is better)
Translates to: RSLGLWLSQTSLALYAAEPQQLA*TEFLLI
Trigger: TATCAATAAGAACTCTGTTCACGCAAGCTGCTGTGG...TTCAGCCGCATAAAGGGCCAGTGAGGTTTGGGACAGCCACAGCCCAAGGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 90 bp CGGAATGTGGGTGTAGCTCCTCCTGACATCTGCTCTCCCTCTCAGTaGCCAAATGGTCTTGAACAAGATACCATTCCCCTGAGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: RNVGVAPPDICSPSQ*PNGLEQDTIPLSLS
Trigger: ACTGAGGCTCAGGGGAATGGTATCTTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCAGATGTCAGGAGGAGCTACACCCACATTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR TCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCGTTGCCAAATGGTCTTaGACAAGATACCATTCCCCT +
Preference number: 2 (lower is better)
Translates to: THQASASANLEKGPCLWAVAKWS*TRYHSP
Trigger: AGGGGAATGGTATCTTGTTCAAGACCATTTGGCAAC...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp CTTCCCTCACAGGCCTGGCTCAGAGCCGGAGCGCTGTaGGCCCGCCTGCCCCCACCGTACCCGAGGGACCCT +
Preference number: 3 (lower is better)
Translates to: LPSQAWLRAGAL*ARLPPPYPRDP
Trigger: AGGGTCCCTCGGGTACGGTGGGGGCAGGCGGGCGCACAGCGCTCCGGCTCTGAGCCAGGCCTGTGAGGGAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp TCCCCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCCACCACAGTGATGACA +
Preference number: 3 (lower is better)
Translates to: SPDRPAWNSGGV*RRTRAATTVMT
Trigger: TGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
3UTR CCA 72 bp GAAGGTGCCTGGGCCCGGGTGGACGCCACAGCGCAGTaGGGTACGAATGGAGGTCAGCCCCTGGTCCCCGGA +
Preference number: 3 (lower is better)
Translates to: EGAWARVDATAQ*GTNGGQPLVPG
Trigger: TCCGGGGACCAGGGGCTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR GCA 72 bp GACCCCACACCCTTCGGGCTCCTCGCCACGTCTGGATaGTCAGCACGTCGAAGGGGCCTGAGGACAGAGGGG +
Preference number: 3 (lower is better)
Translates to: DPTPFGLLATSG*SARRRGLRTEG
Trigger: CCCCTCTGTCCTCAGGCCCCTTCGACGTGCTGAGCATCCAGACGTGGCGAGGAGCCCGAAGGGTGTGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp CCCACCCCGGCCCAGGCGAGAATGGAAAGCCATTTCTaGGGCTCAGCCCAGGGGTCCCTGGCCCTTGAGCCA +
Preference number: 3 (lower is better)
Translates to: PTPAQARMESHF*GSAQGSLALEP
Trigger: TGGCTCAAGGGCCAGGGACCCCTGGGCTGAGCCCCAGAAATGGCTTTCCATTCTCGCCTGGGCCGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp TGCCCCTTTCCTCTCCTGCTGAGCCCCAGAAGCACCTaGCACGGGAGGCAAGTGGGAGCCAGCCAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: CPFPLLLSPRST*HGRQVGASQGS
Trigger: GCTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCTCAGCAGGAGAGGAAAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp GTGGGAGAACCCCCACAGTGCATGACACCCAGTGGCTaGGCTCCTCACCCATCCTCATCAGCCCTGCGGCAG +
Preference number: 3 (lower is better)
Translates to: VGEPPQCMTPSG*APHPSSSALRQ
Trigger: CTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp CATCCTCACAGCTGCGAGGCAGGCCCAAGGCTGGGCTaGACACAGGAGACCAGGTCCACAGCAGCTTGCGTG +
Preference number: 3 (lower is better)
Translates to: HPHSCEAGPRLG*TQETRSTAACV
Trigger: CACGCAAGCTGCTGTGGACCTGGTCTCCTGTGTCCAGCCCAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp GGAGCCATCCTCACAGCTGCGAGGCAGGCCCAAGGCTaGGCTGGACACAGGAGACCAGGTCCACAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: GAILTAARQAQG*AGHRRPGPQQL
Trigger: AAGCTGCTGTGGACCTGGTCTCCTGTGTCCAGCCCAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATGGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp CAGGGAAGCAGGCAAGGGTGCGGGCAAGGACGGGGCTaGTGGGTGCAGCAGAGCAGAAGCTTGCATGAGTGC +
Preference number: 3 (lower is better)
Translates to: QGSRQGCGQGRG*WVQQSRSLHEC
Trigger: GCACTCATGCAAGCTTCTGCTCTGCTGCACCCACCAGCCCCGTCCTTGCCCGCACCCTTGCCTGCTTCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp GCCAGTGGCGGGAAACGGTCCTTAGAGACCCCATTGTaGACCCCGCCCGCCGGAAACAGGCAACAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: ASGGKRSLETPL*TPPAGNRQQAG
Trigger: TCCTGCTTGTTGCCTGTTTCCGGCGGGCGGGGTGCACAATGGGGTCTCTAAGGACCGTTTCCCGCCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 72 bp AGGAGGGGCAGAAGGTGGGAGAACCCCCACAGTGCATaGCACCCAGTGGCTGCGCTCCTCACCCATCCTCAT +
Preference number: 3 (lower is better)
Translates to: RRGRRWENPHSA*HPVAALLTHPH
Trigger: ATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCCCACCTTCTGCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 72 bp ATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTaGCAATGGGGCCAGTGGCGGGAAACGGTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: MRLKGRGGRRRQ*QWGQWRETVLR
Trigger: TCTAAGGACCGTTTCCCGCCACTGGCCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp AGGACACGGGCGGCCACCACAGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTGACCCCATGGATGATC +
Preference number: 3 (lower is better)
Translates to: RTRAATTVMTDS*SSTSWVTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
3UTR-3UTR CAA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGGAAAGGGTAAGTCTCTaGCACGTGCAGTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLERVSL*HVQWKS
Trigger: GGACTTCCACTGCACGTGCAAGAGACTTACCCTTTC...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 72 bp AGCTCCACGTCATGGGTGACCCCATGGATGATCCCGTaGATTACTGTGGGGAGGCATGTGGCTGCGGTAGGC +
Preference number: 3 (lower is better)
Translates to: SSTSWVTPWMIP*ITVGRHVAAVG
Trigger: GCCTACCGCAGCCACATGCCTCCCCACAGTAATTCACGGGATCATCCATGGGGTCACCCATGACGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
3UTR TCA 72 bp CCATGCCACTTTGGCCACCTGTCCCCAGGGCAGGCATaGAGCCCCTGGTCTAATGCTCCAAGACCCATTTGG +
Preference number: 3 (lower is better)
Translates to: PCHFGHLSPGQA*SPWSNAPRPIW
Trigger: CCAAATGGGTCTTGGAGCATTAGACCAGGGGCTTCATGCCTGCCCTGGGGACAGGTGGCCAAAGTGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 72 bp TGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTaGACTGGCACTTGCCTGGCGGTGTCTGTGATCCAC +
Preference number: 3 (lower is better)
Translates to: WPLGTLQPPVPV*TGTCLAVSVIH
Trigger: GTGGATCACAGACACCGCCAGGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp ACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTaGAGCCACCTGTACCTGTGTGAACTGGCACTTGCC +
Preference number: 3 (lower is better)
Translates to: TPGTLLLGLWAL*SHLYLCELALA
Trigger: GGCAAGTGCCAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp TCGGCCAGGGCCCAGCCCAGGGTGTTTGTGAACAGGTaGACTTGGGTGTGGCTGAAAAGGAGAGGTTGTAGG +
Preference number: 3 (lower is better)
Translates to: SARAQPRVFVNR*TWVWLKRRGCR
Trigger: CCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCTGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CAA 90 bp TGTAGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTTGCTCCTCAGCGTGCCACAGTaGGGAGAGGAGAGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: CRKLARESGQVPKVRGLLLSVPQ*GEERSS
Trigger: GCTGCTTCTCTCCTCTCCCAACTGTGGCACGCTGAG...GAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CAA 90 bp CCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCAGTTGCCAAATGGTCTaGAACAAGATACCATTCCCC +
Preference number: 3 (lower is better)
Translates to: PLPSTPGTLLLGLWALCSSCQMV*NKIPFP
Trigger: GGGGAATGGTATCTTGTTCAAGACCATTTGGCAACT...GCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp TCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTaGGCCCTGCACAGCTGTGTCCCTCACACAGCCTCA +
Preference number: 3 (lower is better)
Translates to: SASANLEKGPCL*ALHSCVPHTAS
Trigger: TGAGGCTGTGTGAGGGACACAGCTGTGCAGGGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTaGGTGTGGCTGAAAAGGAGAGGTTGTAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RAQPRVFVNRWT*VWLKRRGCRKL
Trigger: CAGCTTCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp CCCTGGTCTAATGCTCCAAGACCCATTTGGGCACCGTaGTGCTCCTGTGGCCCTGTGTCTCATGAGAAGACA +
Preference number: 3 (lower is better)
Translates to: PWSNAPRPIWAP*CSCGPVSHEKT
Trigger: TGTCTTCTCATGAGACACAGGGCCACAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGCATTAGACCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR GCA 72 bp TGGTCTAATGCTCCAAGACCCATTTGGGCACCGTGGTaGTCCTGTGGCCCTGTGTCTCATGAGAAGACAGCT +
Preference number: 3 (lower is better)
Translates to: WSNAPRPIWAPW*SCGPVSHEKTA
Trigger: AGCTGTCTTCTCATGAGACACAGGGCCACAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGCATTAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CCA 72 bp CAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTaGCTGAAAAGGAGAGGTTGTAGGAAGCTGGCCAGA +
Preference number: 3 (lower is better)
Translates to: QPRVFVNRWTWV*LKRRGCRKLAR
Trigger: TCTGGCCAGCTTCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR-3UTR CAA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACATGCTCTCCCTCTCAGTaGCCAAATGGTCTTGAACAA +
Preference number: 3 (lower is better)
Translates to: QTSLALYAAERPRRKAETCSPSQ*PNGLEQ
Trigger: TTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCA...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR TCA 72 bp GCTGGACACAGGAGACCAGGTCCACAGCAGCTTGCGTaGACAGAGTTCTTATTGATAGTCCCATCACCTCCA +
Preference number: 3 (lower is better)
Translates to: AGHRRPGPQQLA*TEFLLIVPSPP
Trigger: TGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCAAGCTGCTGTGGACCTGGTCTCCTGTGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCGTGCCTGGGCCCGGGTaGACGCCACAGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PDRPAWNSGGVWRRTRAAVPGPG*TPQRSG
Trigger: CCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCAC...GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp CCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCTCGCAGGGGTGGAGGTaGGCAGCACGGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PDRPAWNSGGVWRRTRAASQGWR*AARAAS
Trigger: CGAGGCTGCCCGTGCTGCCCACCTCCACCCCTGCGA...GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR GCA 90 bp GCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGGTGCGGCGTGGCCTaGCCCTCCAGCTGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: APPGTAAVSGGGHGRPPQWCGVA*PSSCSA
Trigger: AGCGCTGCAGCTGGAGGGGCAGGCCACGCCGCACCA...CTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR CCA 90 bp CGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCAAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RIAPPGTAAVSGGGHGRPNSGGV*RRTRAA
Trigger: GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT...TGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp CCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGCGGCGGCTGATGTCCTaGTGCGGCGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PAWNSGGVWRRTRAATTVRRLMS*CGVACP
Trigger: GGGGCAGGCCACGCCGCACCAGGACATCAGCCGCCG...CACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR GCA 90 bp AGGCCTGGCTCAGAGCCGGAGCGCTGTGCGCCCGCCTGCCCCCACCGTACCCGACGCTGCCCCTCCAGCTaGAGCGCTCCTCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RPGSEPERCAPACPHRTRRCPSS*SAPRSS
Trigger: GCTACTCCGAGGAGCGCTGCAGCTGGAGGGGCAGCG...TCGGGTACGGTGGGGGCAGGCGGGCGCACAGCGCTCCGGCTCTGAGCCAGGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGCGGCTGATGTCCTGGTaGGGCGTGGCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAWNSGGVWRRTRAATTVRLMSW*GVACPS
Trigger: GGAGGGGCAGGCCACGCCGCACCAGGACATCAGCCG...CACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR TCA 90 bp CAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCGGCCACGCGGCGGCTaGTGTCCTGGTGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QRRCLAEDTGGHHSDDRLRPRGG*CPGAAW
Trigger: CCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCG...GAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR GCA 90 bp CGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATCTCCAGGGCGCCCCCTaGGCGCTCCGCGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RLEQRRCLAEDTGGHHSDLQGAP*ALREDL
Trigger: CAGGTCTTCGCGGAGCGCGCAGGGGGCGCCCTGGAG...ATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR GCA 90 bp TGCCTGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGAATGGAGGTCAGCCTGGTGCGGCGTGGCCTaGAGGAAGAGGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CLGPGGRHSAVGYEWRSAWCGVA*RKRARR
Trigger: GCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCA...GGCTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp CCCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCGCAGTGGGGTACGAATaGAGGTCAGCCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGSPRLEQRRCLAEDTGGAVGYE*RSAPGP
Trigger: GGGACCAGGGGCTGACCTCCATTCGTACCCCACTGC...GCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR TCA 90 bp AACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACCGGCCACGCGGCGGCTaGTGTCCTGGTGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NSGGVWRRTRAATTVMTDRPRGG*CPGAAW
Trigger: CCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCG...GTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp GGAAGGTGCCTGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGAATGGAGGAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRCLGPGGRHSAVGYEWRNSGGV*RRTRAA
Trigger: GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT...CCTCCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR TCA 90 bp AGGCCTGGCTCAGAGCCGGAGCGCTGTGCGCCCGCCTGCCCCCACCGTACCCGACCACCTGTACCTGTGTaGACTGGCACTTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RPGSEPERCAPACPHRTRPPVPV*TGTCLA
Trigger: CGCCAGGCAAGTGCCAGTTCACACAGGTACAGGTGG...TCGGGTACGGTGGGGGCAGGCGGGCGCACAGCGCTCCGGCTCTGAGCCAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp GCCCAGCCGGGCCTCCCCAAAGCGGCTCCAGCCCATGAAGAGGAAGGTGCCTGGCGCTGCCCCTCCAGCTaGAGCGCTCCTCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AQPGLPKAAPAHEEEGAWRCPSS*SAPRSS
Trigger: GCTACTCCGAGGAGCGCTGCAGCTGGAGGGGCAGCG...CCAGGCACCTTCCTCTTCATGGGCTGGAGCCGCTTTGGGGAGGCCCGGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR GCA 90 bp AGAGGAAGGTGCCTGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGAATGGGCCGCAGACAGGCGATaGCGGGCCGCGCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGRCLGPGGRHSAVGYEWAADRR*RAALWD
Trigger: ATCCCAGAGCGCGGCCCGGCATCGCCTGTCTGCGGC...CCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR GCA 90 bp GTGGGCAGCACGGGCAGCCTCGTAGGCACGGCGGAACTCCTGGAATCGTGGGGCCGTCGCTGCAGGGCCTaGAGGCACCGTCTACGCCGA +
Preference number: 4 (lower is better)
Translates to: VGSTGSLVGTAELLESWGRRCRA*RHRLRR
Trigger: TCGGCGTAGACGGTGCCTGCAGGCCCTGCAGCGACG...GCCCCACGATTCCAGGAGTTCCGCCGTGCCTACGAGGCTGCCCGTGCTGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp TGGGCCCGGGTGGACGCCACAGCGCAGTGGGGTACGAATGGAGGTCAGCCCCTGTGTCCTGGTGCGGCGTaGCCTGCAGGAAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WARVDATAQWGTNGGQPLCPGAA*PAGRGP
Trigger: GGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACA...CAGGGGCTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTCCACCCGGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp CCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCTCCCGTGAATTACTGTaGGGAGGCATGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PDRPAWNSGGVWRRTRAASRELL*GGMWLR
Trigger: CCGCAGCCACATGCCTCCCCACAGTAATTCACGGGA...GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp AGGCCTGGCTCAGAGCCGGAGCGCTGTGCGCCCGCCTGCCCCCACCGTACCCGAGACGCCACAGCGCAGTaGGGTACGAATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RPGSEPERCAPACPHRTRDATAQ*GTNGGQ
Trigger: CTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTC...TCGGGTACGGTGGGGGCAGGCGGGCGCACAGCGCTCCGGCTCTGAGCCAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATTGTCCTGGTGCGGCGTaGCCTGCCCCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLEQRRCLAEDTGGHHSDCPGAA*PAPPAA
Trigger: TGCAGCTGGAGGGGCAGGCCACGCCGCACCAGGACA...ATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR TCA 90 bp AGGCCTGGCTCAGAGCCGGAGCGCTGTGCGCCCGCCTGCCCCCACCGTACCCGACATCTCCTGACCTCATaGTCTGCTTGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPGSEPERCAPACPHRTRHLLTS*SACLGL
Trigger: GAGGCCCAGGCAAGCAGATCATGAGGTCAGGAGATG...TCGGGTACGGTGGGGGCAGGCGGGCGCACAGCGCTCCGGCTCTGAGCCAGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCGTCGCTGCAGGGCCTaGAGGCACCGTCTACGCCGA +
Preference number: 4 (lower is better)
Translates to: QRRCLAEDTGGHHSDDRLRRCRA*RHRLRR
Trigger: TCGGCGTAGACGGTGCCTGCAGGCCCTGCAGCGACG...GAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR GCA 90 bp CTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACGCCTGCCCCTCCAGCTaGAGCGCTCCTCGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEQRRCLAEDTGGHHSDDACPSS*SAPRSS
Trigger: GCTACTCCGAGGAGCGCTGCAGCTGGAGGGGCAGGC...GTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR CCA 90 bp CCGGATCGCCCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCTGCAGCTCCACGTCATaGGTGACCCCATGGATGATC +
Preference number: 4 (lower is better)
Translates to: PDRPAWNSGGVWRRTRAACSSTS*VTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCA...GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGGGCGATCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp AGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCCCTGTCCTGGTGCGGCGTaGCCTGCAGGAAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPITSKAVGPPSLLPAPPCPGAA*PAGRGP
Trigger: GGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACA...GGGAGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp AGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCGTGCCACAGTTGGGAGAGGAGAGCGGCGGCTGATGTCCTaGTGCGGCGTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGAVLCLSPQRATVGRGERRLMS*CGVACR
Trigger: CCTGCAGGCCACGCCGCACCAGGACATCAGCCGCCG...CTCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GCTGAGCCCCAGAAGCACCTGGCACGGGAGGCAAGTGGGAGCCAGCCAGGGAAGGGCACGGGAGGCAAGTaGGAGCCAGCCAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AEPQKHLAREASGSQPGKGTGGK*EPAREA
Trigger: TGCTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCC...CTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp AGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCCCCAGGGCCAGGTGTCCTaGAACACCCCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPITSKAVGPPSLLPAPPQGQVS*NTPTQG
Trigger: CCCCTGGGTGGGGGTGTTCCAGGACACCTGGCCCTG...GGGAGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGGAGCGGTCCTGTGCCTaGGCCCTCAGCGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLERSCA*ALSVPQ
Trigger: CTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTC...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp GGCGGAGACAGTGACAATGGGGCCAGTGGCGGGAAACGGTCCTTAGAGACCCCAGCCGCAGACAGGCGATaGCGGGCCGCGCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGDSDNGASGGKRSLETPAADRR*RAALWD
Trigger: ATCCCAGAGCGCGGCCCGGCATCGCCTGTCTGCGGC...TGGGGTCTCTAAGGACCGTTTCCCGCCACTGGCCCCATTGTCACTGTCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGTGGTGCGGCGTGGCCTaGAGGAAGAGGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQWCGVA*RKRARR
Trigger: GCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCA...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACCGGCTGATGTCCTGGTaGGGCGTGGCCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NSGGVWRRTRAATTVMTDRLMSW*GVACRK
Trigger: CTTCCTGCAGGCCACGCCGCACCAGGACATCAGCCG...GTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR GCA 90 bp TTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCGTGCAGGTCCCCACGTaGCCCCCACCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LIVPSPPKQWAHPPSYQPVQVPT*PPPSSG
Trigger: GCCGCTGCTGGGTGGGGGGCACGTGGGGACCTGCAC...GGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCTGGCAGTGGGGTACGAATaGAGGTCAGCCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RRCLAEDTGGHHSDDRLLAVGYE*RSAPGP
Trigger: GGGACCAGGGGCTGACCTCCATTCGTACCCCACTGC...CAGGAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTTCGCAGGGGTGGAGGTaGGCAGCACGGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RPHQALCCLAFGHSAATCSQGWR*AARAAS
Trigger: CGAGGCTGCCCGTGCTGCCCACCTCCACCCCTGCGA...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CCCGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGGAATTACGAAGTCGCTaGTGCATGCGGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PAWNSGGVWRRTRAATTVELRSR*CMRPGA
Trigger: TGCTCCTGGCCGCATGCACCAGCGACTTCGTAATTC...CACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR TCA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGCACGTCGAAGGGGCCTaGGGACAGAGGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLHVEGA*GQRGPF
Trigger: GAATGGGCCCCTCTGTCCTCAGGCCCCTTCGACGTG...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp GCTGAGCCCCAGAAGCACCTGGCACGGGAGGCAAGTGGGAGCCAGCCAGGGAAGTCCCCAGGGCAGGCATaGAGCCCCTGGTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: AEPQKHLAREASGSQPGKSPGQA*SPWSNA
Trigger: AGCATTAGACCAGGGGCTTCATGCCTGCCCTGGGGA...CTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCGGCTGATGTCCTGGTaGGGCGTGGCCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLPSTPGTLLLGLWALCSRLMSW*GVACRK
Trigger: CTTCCTGCAGGCCACGCCGCACCAGGACATCAGCCG...GCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGGGTAAGTCTCTTGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGAGGTGACGCAGCTCAGCGTCGCTaGAGGGCCTGCAGGCACCGT +
Preference number: 4 (lower is better)
Translates to: RVSLLHVQWKSQGGAGGDAAQRR*RACRHR
Trigger: ACGGTGCCTGCAGGCCCTGCAGCGACGCTGAGCTGC...GTCACCTCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CGCCTGGAACAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATTTACGAAGTCGCTGGTaGATGCGGCCAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLEQRRCLAEDTGGHHSDLRSRW*MRPGAA
Trigger: AGCTGCTCCTGGCCGCATGCACCAGCGACTTCGTAA...ATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTTCCAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570132.1
CDS-3UTR GCA 90 bp TTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCACCCAGCCCCTCAGTaGAGCGCCACCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LIVPSPPKQWAHPPSYQPHPAPQ*SATSQG
Trigger: CCCCTGCGAGGTGGCGCTGCACTGAGGGGCTGGGTG...GGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR GCA 90 bp GAGACCCCATTGTGCACCCCGCCCGCCGGAAACAGGCAACAAGCAGGACCCTGCACCCGAGGGACCCTATaGCCCTCTGCCCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ETPLCTPPAGNRQQAGPCTRGTL*PSAPFL
Trigger: GAGGAAAGGGGCAGAGGGGCATAGGGTCCCTCGGGT...GCAGGGTCCTGCTTGTTGCCTGTTTCCGGCGGGCGGGGTGCACAATGGGGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp GATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTGGGAAGTCGGCACCCTaGCAGCCTGCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DSPITSKAVGPPSLLPAPGKSAP*QPAAPS
Trigger: GGAAGGGGCTGCAGGCTGGCAGGGTGCCGACTTCCC...AGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp GCTGAGCCCCAGAAGCACCTGGCACGGGAGGCAAGTGGGAGCCAGCCAGGGAAGTTAGAGACCCCATTGTaGACCCCGCCCGCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: AEPQKHLAREASGSQPGKLETPL*TPPAGN
Trigger: GTTTCCGGCGGGCGGGGTGCACAATGGGGTCTCTAA...CTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCGTGCCACAGTTGGGAGAGGAGAGACAGGCGTGAGCCACTaGGCCCAACCTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RGAVLCLSPQRATVGRGETGVSH*AQPPHS
Trigger: GGAGTGGGGAGGTTGGGCGCAGTGGCTCACGCCTGT...CTCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQNSGGV*RRTRAA
Trigger: GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCCTGGACGCCACAGCGCAGTaGGGTACGAATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RRCLAEDTGGHHSDDRLLDATAQ*GTNGGQ
Trigger: CTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTC...CAGGAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGCCTGGGCCCGGGTaGACGCCACAGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QTSLALYAAERPRRKAETVPGPG*TPQRSG
Trigger: CCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCAC...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCGGCCCAAGGCTGGGCTaGACACAGGAGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLPSTPGTLLLGLWALCSGPRLG*TQETRS
Trigger: GGACCTGGTCTCCTGTGTCCAGCCCAGCCTTGGGCC...GCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 72 bp TCCCCTGAGCCTCAGTCTCCCGCCAGGAGGCAGGAATaGGAGCCATCCTCACAGCTGCGAGGCAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SPEPQSPARRQE*EPSSQLRGRPK
Trigger: CTTGGGCCTGCCTCGCAGCTGTGAGGATGGCTCCAATTCCTGCCTCCTGGCGGGAGACTGAGGCTCAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp GCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGACAATGGGGGGACGGGGCCAAGGATaGCTCTGCGGGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: ALYAAERPRRKAETVTMGGRGQG*LCGLTA
Trigger: TGCTGTGAGCCCGCAGAGTCATCCTTGGCCCCGTCC...CCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CAGCGGCGGTGTCTGGCGGAGGACACGGGCGGCCACCACAGTGATGACAGACTCGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: QRRCLAEDTGGHHSDDRLVMTDS*SSTSWV
Trigger: CACCCATGACGTGGAGCTGCAGGAGTCTGTCATCAC...GAGTCTGTCATCACTGTGGTGGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR GCA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGGGAGAACCCCCACAGTaGATGACACCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLGEPPQ*MTPSGC
Trigger: GCAGCCACTGGGTGTCATGCACTGTGGGGGTTCTCC...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGCGGCAGGCAGGTGATCTGCCTGAGCCCTCAGCGTaGCACAGTTGGGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGCAPHPSSSALRQAGDLPEPSA*HSWERR
Trigger: TCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGG...CAGATCACCTGCCTGCCGCAGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGAGAGGAGCGGTCCTGTaGCTGAGCCCTCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQRGAVL*LSPQRA
Trigger: GGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CAGCTCCACGTCATGGGTGACCCCATGGATGATCCCGTGAATTACTGTGGGGAGCGGCGGCTGATGTCCTaGTGCGGCGTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLHVMGDPMDDPVNYCGERRLMS*CGVACR
Trigger: CCTGCAGGCCACGCCGCACCAGGACATCAGCCGCCG...CTCCCCACAGTAATTCACGGGATCATCCATGGGGTCACCCATGACGTGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp ATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCGCAGTGGGGTACGAATaGAGGTCAGCCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IVPSPPKQWAHPPSYQPLAVGYE*RSAPGP
Trigger: GGGACCAGGGGCTGACCTCCATTCGTACCCCACTGC...GAGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR TCA 90 bp GTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCCGGCCACGCGGCGGCTaGTGTCCTGGTGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VNRVLIDSPITSKAVGPPRPRGG*CPGAAW
Trigger: CCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCG...GGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGGGAAGGCGGAGACAGTaGCAATGGGGCCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRGRRRQ*QWGQWR
Trigger: CCGCCACTGGCCCCATTGTCACTGTCTCCGCCTTCC...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp GAGACCCCATTGTGCACCCCGCCCGCCGGAAACAGGCAACAAGCAGGACCCTGCCCTCAGTTTCCCCCTTaGAAGCTGGGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ETPLCTPPAGNRQQAGPCPQFPP*KLGASS
Trigger: AGATGAAGCCCCCAGCTTTCAAGGGGGAAACTGAGG...GCAGGGTCCTGCTTGTTGCCTGTTTCCGGCGGGCGGGGTGCACAATGGGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCGTGCCACAGTTGGGAGAGGAGAGCACCAGGCACTCTGCTaGTTGGCCTTTGGGCACTCT +
Preference number: 4 (lower is better)
Translates to: RGAVLCLSPQRATVGRGEHQALC*LAFGHS
Trigger: AGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTG...CTCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp ATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCCCTCCAAGGCAGGAATaGACACAGACGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVPSPPKQWAHPPSYQPLPPRQE*TQTWAW
Trigger: CCAGGCCCACGTCTGTGTGCATTCCTGCCTTGGAGG...GAGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR CCA 90 bp CACAGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATTCTACGCCGAGACCGTaGGCCTGCGGGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HSDDRLLQLHVMGDPMDDSTPRP*ACGGSS
Trigger: CGAGCTGCCCCCGCAGGCCCACGGTCTCGGCGTAGA...ATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR CCA 90 bp ATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCGAAGAGGAAGGTGCCTaGGCCCGGGTGGACGCCACA +
Preference number: 4 (lower is better)
Translates to: IDSPITSKAVGPPSLLPAEEEGA*ARVDAT
Trigger: TGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCTTC...GGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp TTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGTCGCAGGGGTGGAGGTaGGCAGCACGGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LLIVPSPPKQWAHPPSYQSQGWR*AARAAS
Trigger: CGAGGCTGCCCGTGCTGCCCACCTCCACCCCTGCGA...CTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp CCTGGTCTAATGCTCCAAGACCCATTTGGGCACCGTGGTGCTCCTGTGGCCCTGAGCCCCAGAAGCACCTaGCACGGGAGGCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLMLQDPFGHRGAPVALSPRST*HGRQVG
Trigger: TCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCT...CAGGGCCACAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGCATTAGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCGGAGCCTTGGGCTGTaGCTGTCCCAAACCTCACTG +
Preference number: 4 (lower is better)
Translates to: DSPITSKAVGPPSLLPAPRSLGL*LSQTSL
Trigger: CAGTGAGGTTTGGGACAGCCACAGCCCAAGGCTCCG...AGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCACACAGACGTGGGCCTaGGGGCCATGCCTAGCGATC +
Preference number: 4 (lower is better)
Translates to: LIVPSPPKQWAHPPSYQPTQTWA*GPCLAI
Trigger: GATCGCTAGGCATGGCCCCCAGGCCCACGTCTGTGT...GGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568415.1
3UTR CAA 72 bp GCTCACCCACACTGTCTCCCTATCTCCCATGCCACTTaGGCCACCTGTCCCCAGGGCAGGCATGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AHPHCLPISHAT*ATCPQGRHEAP
Trigger: AGGGGCTTCATGCCTGCCCTGGGGACAGGTGGCCAAAGTGGCATGGGAGATAGGGAGACAGTGTGGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 72 bp CCACTCCTCTCCCGTCCACACCAGGCACTCTGCTGCTaGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGT +
Preference number: 4 (lower is better)
Translates to: PLLSRPHQALCC*AFGHSAATCTC
Trigger: ACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAAACCCCCACAGTGCATaGCACCCAGTGGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: QTSLALYAAERPRRKAETNPHSA*HPVAAL
Trigger: GAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGTT...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CACAGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATGCAGCTCAGCGTCGCTaGAGGGCCTGCAGGCACCGT +
Preference number: 4 (lower is better)
Translates to: HSDDRLLQLHVMGDPMDDAAQRR*RACRHR
Trigger: ACGGTGCCTGCAGGCCCTGCAGCGACGCTGAGCTGC...ATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000570132.1
CDS-3UTR GCA 90 bp CCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PSTPGTLLLGLWALCSHLVMTDS*SSTSWV
Trigger: CACCCATGACGTGGAGCTGCAGGAGTCTGTCATCAC...CAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCCACCCAGCCCCTCAGTaGAGCGCCACCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: THQASASANLEKGPCLWAHPAPQ*SATSQG
Trigger: CCCCTGCGAGGTGGCGCTGCACTGAGGGGCTGGGTG...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAAGCCATCCTCACAGCTaGGAGGCAGGCCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTSLALYAAERPRRKAETSHPHS*EAGPRL
Trigger: CAGCCTTGGGCCTGCCTCGCAGCTGTGAGGATGGCT...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGGGTAAGTCTCTTGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGAGGTGACCATCCTCATCAGCCCTaGGGCAGGCAGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: RVSLLHVQWKSQGGAGGDHPHQP*GRQVIC
Trigger: ACAGATCACCTGCCTGCCGCAGGGCTGATGAGGATG...GTCACCTCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGGGAGGGTCTGTAGGTaGAAGGCTCAGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RPHQALCCLAFGHSAATCGRVCR*KAQALP
Trigger: AGGAAGTGCCTGAGCCTTGCACCTACAGACCCTCCC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp ACCCCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCATTTGGGCACCGTGGTaGTCCTGTGGCCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TPTVHDTQWLRSSPILISIWAPW*SCGPVS
Trigger: AGACACAGGGCCACAGGAGCACCACGGTGCCCAAAT...GCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCACGTCGCTGCAGGGCCTaGAGGCACCTCCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPRRCRA*RHLQGR
Trigger: CCTGCCTTGGAGGTGCCTGCAGGCCCTGCAGCGACG...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR GCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCAGCTCAGCGTCGCTaGAGGGCCTGCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPAAQRR*RACRHL
Trigger: GAGGTGCCTGCAGGCCCTGCAGCGACGCTGAGCTGC...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR CCA 90 bp GTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTAAACAGCGGCGGTGTCTaGCGGAGGACACGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VLIDSPITSKAVGPPSLLNSGGV*RRTRAA
Trigger: GGCCGCCCGTGTCCTCCGCCAGACACCGCCGCTGTT...TAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp GAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCGGGGCTTCATCTGCCTaGGCAGGGCCTCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EFLLIVPSPPKQWAHPPSGASSA*AGPLAS
Trigger: GGAGGCCAGAGGCCCTGCCCAGGCAGATGAAGCCCC...GGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 72 bp CGGCAGGCAGGTGATCTGTGTGAAAGGGTAAGTCTCTaGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RQAGDLCERVSL*HVQWKSQGGAG
Trigger: TCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCTTTCACACAGATCACCTGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp ACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTACCTGTGTGAACTGGGGGTCCCTGGCCCTTaGGCCATGGCTGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TLLLGLWALCSHLYLCELGVPGP*AMAVSF
Trigger: GAAAGAGACAGCCATGGCTCAAGGGCCAGGGACCCC...CAGTTCACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp ACCCCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCAGCCCAGGGTGTTTGTaGACAGGTGGACTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TPTVHDTQWLRSSPILISSPGCL*TGGLGC
Trigger: ACACCCAAGTCCACCTGTTCACAAACACCCTGGGCT...GCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCGCCTGGCGGTGTCTGTaGTCCACAGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: THQASASANLEKGPCLWAAWRCL*STGPRL
Trigger: GAGCCTGGGGCCTGTGGATCACAGACACCGCCAGGC...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CTCATGAGAAGACAGCTGGTTGCAAAGCCAGGGCTTTCTCTGGGAGGGTCTGTACGTCGCTGCAGGGCCTaGAGGCACCGTCTACGCCGA +
Preference number: 4 (lower is better)
Translates to: LMRRQLVAKPGLSLGGSVRRCRA*RHRLRR
Trigger: TCGGCGTAGACGGTGCCTGCAGGCCCTGCAGCGACG...TACAGACCCTCCCAGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTCATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGCGTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCAGTGCCTGGGCCCGGGTaGACGCCACAGCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CVNRVLIDSPITSKAVGPVPGPG*TPQRSG
Trigger: CCCACTGCGCTGTGGCGTCCACCCGGGCCCAGGCAC...TGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp CACAGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATGAAGAGGAAGGTGCCTaGGCCCGGGTGGACGCCACA +
Preference number: 4 (lower is better)
Translates to: HSDDRLLQLHVMGDPMDDEEEGA*ARVDAT
Trigger: TGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCTTC...ATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp CCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGAATTACGAAGTCGCTaGTGCATGCGGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PTVHDTQWLRSSPILISPELRSR*CMRPGA
Trigger: TGCTCCTGGCCGCATGCACCAGCGACTTCGTAATTC...AGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGGGGCAAGGACGGGGCTaGTGGGTGCAGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLIVPSPPKQWAHPPSYQGQGRG*WVQQSR
Trigger: TCTGCTCTGCTGCACCCACCAGCCCCGTCCTTGCCC...CTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCGGCCCAGGCGAGAATaGAAAGCCATTTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LIVPSPPKQWAHPPSYQPRPRRE*KAISGA
Trigger: AGCCCCAGAAATGGCTTTCCATTCTCGCCTGGGCCG...GGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp ATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCTCTCCCATGCCACTTTaGCCACCTGTCCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IDSPITSKAVGPPSLLPASPMPL*PPVPRA
Trigger: TGCCCTGGGGACAGGTGGCCAAAGTGGCATGGGAGA...GGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCAGCGATCAGCTGTCCTaGGCCGCCCTCCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: EFLLIVPSPPKQWAHPPSSDQLS*AALLHS
Trigger: GGAGTGCAGGAGGGCGGCCCAGGACAGCTGATCGCT...GGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR CCA 90 bp ATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCGAATGCACACAGACGTaGGCCTGGGGGCCATGCCTA +
Preference number: 4 (lower is better)
Translates to: IDSPITSKAVGPPSLLPAECTQT*AWGPCL
Trigger: TAGGCATGGCCCCCAGGCCCACGTCTGTGTGCATTC...GGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568415.1
3UTR CAA 72 bp GCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTaGCTCGGCCCACGGGAAAGCCTCTCCAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ARESGQVPKVRG*LGPRESLSKTG
Trigger: TCCTGTCTTGGAGAGGCTTTCCCGTGGGCCGAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGGACTTGGGTGTGGCTaGAAAGGAGAGGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RPHQALCCLAFGHSAATCGLGCG*KGEVVG
Trigger: TCCTACAACCTCTCCTTTTCAGCCACACCCAAGTCC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCAGTGGGGTACGAATaGAGGTCAGCCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPAVGYE*RSAPGP
Trigger: GGGACCAGGGGCTGACCTCCATTCGTACCCCACTGC...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp CAGCTCCACGTCATGGGTGACCCCATGGATGATCCCGTGAATTACTGTGGGGAGGACGCCACAGCGCAGTaGGGTACGAATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLHVMGDPMDDPVNYCGEDATAQ*GTNGGQ
Trigger: CTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTC...CTCCCCACAGTAATTCACGGGATCATCCATGGGGTCACCCATGACGTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR CCA 90 bp TTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACGAAGAGGAAGGTGCCTaGGCCCGGGTGGACGCCACA +
Preference number: 4 (lower is better)
Translates to: FLLIVPSPPKQWAHPPSYEEEGA*ARVDAT
Trigger: TGTGGCGTCCACCCGGGCCCAGGCACCTTCCTCTTC...GTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp ACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCGGCTCACAGCAGCCATaGGGGAAGTCGGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: TEFLLIVPSPPKQWAHPPGSQQP*GKSAPC
Trigger: GCAGGGTGCCGACTTCCCCCATGGCTGCTGTGAGCC...GGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCAGGATCCGAGGGGTTaGGGTGAGAGGAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLIVPSPPKQWAHPPSYQQDPRG*GERRQL
Trigger: GAGCTGCCTCCTCTCACCCCAACCCCTCGGATCCTG...CTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGTGTCCACAGAGGGCATaGCACTCATCAGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQCPQRA*HSSGIC
Trigger: GCAGATGCCTGATGAGTGCCATGCCCTCTGTGGACA...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CGGAGCCTTGGGCTGTGGCTGTCCCAAACCTCACTGGCCCTTTATGCGGCTGAAATGGGCCCCAGGGAGTaGTCAGGGCTGAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: RSLGLWLSQTSLALYAAEMGPRE*SGLKMK
Trigger: TTTCATCTTCAGCCCTGACCACTCCCTGGGGCCCAT...TTCAGCCGCATAAAGGGCCAGTGAGGTTTGGGACAGCCACAGCCCAAGGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGACAATGGGGTGTACCTGTGTGAACTaGCACTTGCCTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ALYAAERPRRKAETVTMGCTCVN*HLPGGV
Trigger: GACACCGCCAGGCAAGTGCCAGTTCACACAGGTACA...CCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp TGTTTGGGCTGGGGGCAGATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGATGGTCTCCATCTCCTaGCCTCATGATCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: CLGWGQMDVRLWAPGSGQMVSIS*PHDLLA
Trigger: GGCAAGCAGATCATGAGGTCAGGAGATGGAGACCAT...CTGACCACTCCCTGGGGCCCATAGCCTTACATCCATCTGCCCCCAGCCCAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp ATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCTCCTGCACTCCCATCTaGCATATGCACCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: IDSPITSKAVGPPSLLPASCTPI*HMHPSI
Trigger: GATGCTGGGGTGCATATGTCAGATGGGAGTGCAGGA...GGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR GCA 90 bp GAACAAGATACCATTCCCCTGAGCCTCAGTCTCCCGCCAGGAGGCAGGAATTGGTTACGAAGTCGCTGGTaGATGCGGCCAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EQDTIPLSLSLPPGGRNWLRSRW*MRPGAA
Trigger: AGCTGCTCCTGGCCGCATGCACCAGCGACTTCGTAA...CCAATTCCTGCCTCCTGGCGGGAGACTGAGGCTCAGGGGAATGGTATCTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTCGCCACGTCTGGATaGTCAGCACGTCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVLIDSPITSKAVGPPSLLATSG*SARRRG
Trigger: GCCCCTTCGACGTGCTGAGCATCCAGACGTGGCGAG...GAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCCCTGAGAAGACAGCTGGTTaGAAAGCCAGGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTVHDTQWLRSSPILISPEKTAG*KARAFS
Trigger: AGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTC...AGGGCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCTGGGCCTGGGGGCCATaGCTAGCGATCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVLIDSPITSKAVGPPSLWAWGP*LAISCP
Trigger: AGGACAGCTGATCGCTAGGCATGGCCCCCAGGCCCA...GAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR CCA 90 bp TGTAGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTTGCTCGCTCCTCGCCACGTCTaGATGCTCAGCACGTCGAAG +
Preference number: 4 (lower is better)
Translates to: CRKLARESGQVPKVRGLLAPRHV*MLSTSK
Trigger: CTTCGACGTGCTGAGCATCCAGACGTGGCGAGGAGC...GAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCCCCATTTGGGCACCGTaGTGCTCCTGTGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: THQASASANLEKGPCLWAPIWAP*CSCGPV
Trigger: CACAGGGCCACAGGAGCACCACGGTGCCCAAATGGG...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGGGTGTAGCTCCTCCTaGCATCTGCTCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPGCSSS*HLLSLS
Trigger: TGAGAGGGAGAGCAGATGTCAGGAGGAGCTACACCC...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCATTACGAAGTCGCTGGTaGATGCGGCCAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPLRSRW*MRPGAA
Trigger: AGCTGCTCCTGGCCGCATGCACCAGCGACTTCGTAA...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR GCA 90 bp ACTCATCAGGCATCTGCATCCGCTAACCTAGAGAAAGGACCGTGTTTGTGGGCCAGGGTTATTGGAGGCTaGCCCAGAGGAGCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: THQASASANLEKGPCLWARVIGG*PRGAVL
Trigger: CAGGACCGCTCCTCTGGGGCAGCCTCCAATAACCCT...GGCCCACAAACACGGTCCTTTCTCTAGGTTAGCGGATGCAGATGCCTGATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GAACAAGATACCATTCCCCTGAGCCTCAGTCTCCCGCCAGGAGGCAGGAATTGGAAAGGACCGTGTTTGTaGGCCCTGCACAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EQDTIPLSLSLPPGGRNWKGPCL*ALHSCV
Trigger: GACACAGCTGTGCAGGGCCCACAAACACGGTCCTTT...CCAATTCCTGCCTCCTGGCGGGAGACTGAGGCTCAGGGGAATGGTATCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CTCATGAGAAGACAGCTGGTTGCAAAGCCAGGGCTTTCTCTGGGAGGGTCTGTAGTGCATGACACCCAGTaGCTGCGCTCCTCACCCATC +
Preference number: 4 (lower is better)
Translates to: LMRRQLVAKPGLSLGGSVVHDTQ*LRSSPI
Trigger: GATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCAC...TACAGACCCTCCCAGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GATGGATGTAAGGCTATGGGCCCCAGGGAGTGGTCAGGGCTGAAGATGAAAAAGTCTCCAAGACAGGAGTaGAGGAGGCGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DGCKAMGPREWSGLKMKKSPRQE*RRRCRR
Trigger: CCTCCTGCACCGCCTCCTCCACTCCTGTCTTGGAGA...CTTTTTCATCTTCAGCCCTGACCACTCCCTGGGGCCCATAGCCTTACATCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp ACCCCCACAGTGCATGACACCCAGTGGCTGCGCTCCTCACCCATCCTCATCAGCGTGTTTGTGAACAGGTaGACTTGGGTGTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TPTVHDTQWLRSSPILISVFVNR*TWVWLK
Trigger: TTTCAGCCACACCCAAGTCCACCTGTTCACAAACAC...GCTGATGAGGATGGGTGAGGAGCGCAGCCACTGGGTGTCATGCACTGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp AGTGATGACAGACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATCCCCCATGGATGATCCCGTaGATTACTGTGGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SDDRLLQLHVMGDPMDDPPWMIP*ITVGRH
Trigger: ATGCCTCCCCACAGTAATTCACGGGATCATCCATGG...GGGATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219542.3
CDS-3UTR TCA 90 bp ATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGCCCCTCCCACAGCAGCTTGCGTaGACAGAGTTCTTATTGATA +
Preference number: 4 (lower is better)
Translates to: IVPSPPKQWAHPPSYQPLPQQLA*TEFLLI
Trigger: TATCAATAAGAACTCTGTTCACGCAAGCTGCTGTGG...GAGGGGCTGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAAGCAGAGCAGAAGCTTaGATGAGTGCAGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPSRAEA*MSAGPH
Trigger: GTGGGGACCTGCACTCATGCAAGCTTCTGCTCTGCT...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGTAGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTTGCTCTGCAGCTCCACGTCATaGGTGACCCCATGGATGATC +
Preference number: 4 (lower is better)
Translates to: CRKLARESGQVPKVRGLLCSSTS*VTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCA...GAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp AACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCGACGCCACAGCGCAGTaGGGTACGAATGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NRVLIDSPITSKAVGPPSDATAQ*GTNGGQ
Trigger: CTGACCTCCATTCGTACCCCACTGCGCTGTGGCGTC...GGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp GTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTAATGGAAAGCCATTTCTaGGGCTCAGCCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLIDSPITSKAVGPPSLLMESHF*GSAQGS
Trigger: GGACCCCTGGGCTGAGCCCCAGAAATGGCTTTCCAT...TAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 72 bp AGGGAGTGGTCAGGGCTGAAGATGAAAAAGTGGAGGTaGTCCAAGGGTTATTGGAGGCTGCCCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: REWSGLKMKKWR*SKGYWRLPQRS
Trigger: GCTCCTCTGGGGCAGCCTCCAATAACCCTTGGACAACCTCCACTTTTTCATCTTCAGCCCTGACCACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp AGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTCCCATCTGACATATaGACCCCAGCATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: RVLIDSPITSKAVGPPSLLPSDI*TPASGT
Trigger: GGTCCCAGATGCTGGGGTGCATATGTCAGATGGGAG...GAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR CCA 90 bp AGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCTGCAGCTCCACGTCATaGGTGACCCCATGGATGATC +
Preference number: 4 (lower is better)
Translates to: RVLIDSPITSKAVGPPSLCSSTS*VTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCA...GAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp ACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCGAATTACGAAGTCGCTaGTGCATGCGGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TEFLLIVPSPPKQWAHPPELRSR*CMRPGA
Trigger: TGCTCCTGGCCGCATGCACCAGCGACTTCGTAATTC...GGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp CTCATGAGAAGACAGCTGGTTGCAAAGCCAGGGCTTTCTCTGGGAGGGTCTGTATTGTCCAAGGGTTATTaGAGGCTGCCCCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LMRRQLVAKPGLSLGGSVLSKGY*RLPQRS
Trigger: GCTCCTCTGGGGCAGCCTCCAATAACCCTTGGACAA...TACAGACCCTCCCAGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR TCA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTTGCCAAATGGTCTTaGACAAGATACCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QTSLALYAAERPRRKAETVAKWS*TRYHSP
Trigger: AGGGGAATGGTATCTTGTTCAAGACCATTTGGCAAC...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp TGCGTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCAGGCCTTTGGGCACTCTaGAGCCACCTGTACCTGTGT +
Preference number: 4 (lower is better)
Translates to: CVNRVLIDSPITSKAVGPGLWAL*SHLYLC
Trigger: ACACAGGTACAGGTGGCTGCAGAGTGCCCAAAGGCC...TGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp CCTGACATCTGCTCTCCCTCTCAGTTGCCAAATGGTCTTGAACAAGATACCATTCTCTTGCACGTGCAGTaGAAGTCCCAGGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: PDICSPSQLPNGLEQDTILLHVQ*KSQGGA
Trigger: AGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAG...AATGGTATCTTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCAGATGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GGCGGAGACAGTGACAATGGGGCCAGTGGCGGGAAACGGTCCTTAGAGACCCCACTGAAGATGAAAAAGTaGAGGTTGTCCAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GGDSDNGASGGKRSLETPLKMKK*RLSKGY
Trigger: ATAACCCTTGGACAACCTCCACTTTTTCATCTTCAG...TGGGGTCTCTAAGGACCGTTTCCCGCCACTGGCCCCATTGTCACTGTCTCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACGTTTGCAGAAGTGTTTaGGCTGGGGGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: FLLIVPSPPKQWAHPPSYVCRSV*AGGRWM
Trigger: CATCCATCTGCCCCCAGCCCAAACACTTCTGCAAAC...GTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGCGTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCAGCTCCAAGACCCATTTaGGCACCGTGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CVNRVLIDSPITSKAVGPAPRPI*APWCSC
Trigger: ACAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGC...TGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp GAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCACGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: EFLLIVPSPPKQWAHPPSTVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCGT...GGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CCA 90 bp TGCGTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCAATGCACCCCAGCATCTaGGACCCCTCTAGTTTCCCG +
Preference number: 4 (lower is better)
Translates to: CVNRVLIDSPITSKAVGPMHPSI*DPSSFP
Trigger: CGGGAAACTAGAGGGGTCCCAGATGCTGGGGTGCAT...TGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568415.1
CDS-3UTR TCA 90 bp CCTGACATCTGCTCTCCCTCTCAGTTGCCAAATGGTCTTGAACAAGATACCATTGAGCAGAAGCTTGCATaGGTGCAGGTCCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: PDICSPSQLPNGLEQDTIEQKLA*VQVPTC
Trigger: GCACGTGGGGACCTGCACTCATGCAAGCTTCTGCTC...AATGGTATCTTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCAGATGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp TGCGTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCAGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: CVNRVLIDSPITSKAVGPVMTDS*SSTSWV
Trigger: CACCCATGACGTGGAGCTGCAGGAGTCTGTCATCAC...TGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568223.7
ENST00000568415.1
CDS-3UTR CCA 90 bp ACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCAGGTGGACTTGGGTGTaGCTGAAAAGGAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TEFLLIVPSPPKQWAHPPRWTWV*LKRRGC
Trigger: ACAACCTCTCCTTTTCAGCCACACCCAAGTCCACCT...GGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
3UTR CAA 72 bp GGTGTAGCTCCTCCTGACATCTGCTCTCCCTCTCAGTaGCCAAATGGTCTTGAACAAGATACCATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVAPPDICSPSQ*PNGLEQDTIPL
Trigger: CAGGGGAATGGTATCTTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCAGATGTCAGGAGGAGCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR GCA 90 bp CTCATGAGAAGACAGCTGGTTGCAAAGCCAGGGCTTTCTCTGGGAGGGTCTGTAAGGTCCACAGCAGCTTaGGTGAACAGAGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: LMRRQLVAKPGLSLGGSVRSTAA*VNRVLI
Trigger: AATAAGAACTCTGTTCACGCAAGCTGCTGTGGACCT...TACAGACCCTCCCAGAGAAAGCCCTGGCTTTGCAACCAGCTGTCTTCTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS CCA 90 bp CGAAGGGCCGCACCGGCCGCAGACAGGCGATGCCGGGCCGCGCTCTaGGATCGGGGCCGCCCAGGGTCAGGCGCAGCGCCCCAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: RRAAPAADRRCRAAL*DRGRPGSGAAPQPG
Trigger: ACCCGGCTGGGGCGCTGCGCCTGACCCTGGGCGGCCCCGATCCCAGAGCGCGGCCCGGCATCGCCTGTCTGCGGCCGGTGCGGCCCTTCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219542.3
ENST00000567076.5
ENST00000568223.7
CDS GCA 90 bp AGACCTGGGCGCCCGCGAAGGGCCGCACCGGCCGCAGACAGGCGATaGCGGGCCGCGCTCTGGGATCGGGGCCGCCCAGGGTCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: RPGRPRRAAPAADRR*RAALWDRGRPGSGA
Trigger: TGCGCCTGACCCTGGGCGGCCCCGATCCCAGAGCGCGGCCCGGCATCGCCTGTCTGCGGCCGGTGCGGCCCTTCGCGGGCGCCCAGGTCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219542.3
ENST00000567076.5
ENST00000568223.7
CDS GCA 90 bp CGCAGCTCAAAGCGGAAGGCGGCCACGCGGCGGCTGATGTCCTGGTaGGGCGTGGCCTGCAGGAAGAGGGCCCGGCGCTCGCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: RSSKRKAATRRLMSW*GVACRKRARRSRGP
Trigger: GGGTCCCCGCGAGCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCGCCTTCCGCTTTGAGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219542.3
ENST00000567076.5
ENST00000568223.7
CDS TCA 90 bp GCCCGTCCTCGCGCAGCTCAAAGCGGAAGGCGGCCACGCGGCGGCTaGTGTCCTGGTGCGGCGTGGCCTGCAGGAAGAGGGCCCGGCGCT +
Preference number: 5 (lower is better)
Translates to: ARPRAAQSGRRPRGG*CPGAAWPAGRGPGA
Trigger: AGCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCGCCTTCCGCTTTGAGCTGCGCGAGGACGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219542.3
ENST00000567076.5
ENST00000568223.7
CDS CCA 90 bp GGCCTGCAGGCACCTCCAAGGCAGGAATGCACACAGACGTGGGCCTaGGGGCCATGCCTAGCGATCAGCTGTCCTGGGCCGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLQAPPRQECTQTWA*GPCLAISCPGPPSC
Trigger: GCAGGAGGGCGGCCCAGGACAGCTGATCGCTAGGCATGGCCCCCAGGCCCACGTCTGTGTGCATTCCTGCCTTGGAGGTGCCTGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS-3UTR CAA 90 bp AGGGGACCCCACACCCTTCGGGCTCCTCGCCACGTCTGGATGCTCAGCACGTCGCCAAAGGTAAGGGGGTaGCTCGGCCCACGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: RGPHTLRAPRHVWMLSTSPKVRG*LGPRES
Trigger: GCTTTCCCGTGGGCCGAGCAACCCCCTTACCTTTGG...CGACGTGCTGAGCATCCAGACGTGGCGAGGAGCCCGAAGGGTGTGGGGTCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp GCTGAGCCCCAGAAGCACCTGGCACGGGAGGCAAGTGGGAGCCAGCCAGGGAAGGCCAGGAGGCAGGAATaGGAGCCATCCTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: AEPQKHLAREASGSQPGKARRQE*EPSSQL
Trigger: CAGCTGTGAGGATGGCTCCAATTCCTGCCTCCTGGC...CTTCCCTGGCTGGCTCCCACTTGCCTCCCGTGCCAGGTGCTTCTGGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS CCA 90 bp CACACAGACGTGGGCCTGGGGGCCATGCCTAGCGATCAGCTGTCCTaGGCCGCCCTCCTGCACTCCCATCTGACATATGCACCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: HTDVGLGAMPSDQLS*AALLHSHLTYAPQH
Trigger: ATGCTGGGGTGCATATGTCAGATGGGAGTGCAGGAGGGCGGCCCAGGACAGCTGATCGCTAGGCATGGCCCCCAGGCCCACGTCTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS-3UTR CAA 90 bp GAGACCCCATTGTGCACCCCGCCCGCCGGAAACAGGCAACAAGCAGGACCCTGCAGGGGTCCCTGGCCCTaGAGCCATGGCTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: ETPLCTPPAGNRQQAGPCRGPWP*SHGCLF
Trigger: AAAGAGACAGCCATGGCTCAAGGGCCAGGGACCCCT...GCAGGGTCCTGCTTGTTGCCTGTTTCCGGCGGGCGGGGTGCACAATGGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp AGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCGTGCCACAGTTGGGAGAGGAGAGCAGGCACTCTGCTGCTaGGCCTTTGGGCACTCTGCA +
Preference number: 5 (lower is better)
Translates to: RGAVLCLSPQRATVGRGEQALCC*AFGHSA
Trigger: TGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTG...CTCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGTCCTTAGAGACCCCATaGTGCACCCCGCCCGCCGGA +
Preference number: 5 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRSLETP*CTPPAG
Trigger: TCCGGCGGGCGGGGTGCACAATGGGGTCTCTAAGGA...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp CCTCTCCCGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCGTTGTCCAAGGGTTATaGGAGGCTGCCCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PLPSTPGTLLLGLWALCSVVQGL*EAAPEE
Trigger: CTCCTCTGGGGCAGCCTCCAATAACCCTTGGACAAC...GCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS TCA 90 bp TGCCTAGCGATCAGCTGTCCTGGGCCGCCCTCCTGCACTCCCATCTaGCATATGCACCCCAGCATCTGGGACCCCTCTAGTTTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: CLAISCPGPPSCTPI*HMHPSIWDPSSFPD
Trigger: ATCCGGGAAACTAGAGGGGTCCCAGATGCTGGGGTGCATATGTCAGATGGGAGTGCAGGAGGGCGGCCCAGGACAGCTGATCGCTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS-3UTR CAA 90 bp GGCGGAGACAGTGACAATGGGGCCAGTGGCGGGAAACGGTCCTTAGAGACCCCAGCCTCAGTTTCCCCCTaGAAAGCTGGGGGCTTCATC +
Preference number: 5 (lower is better)
Translates to: GGDSDNGASGGKRSLETPASVSP*KAGGFI
Trigger: GATGAAGCCCCCAGCTTTCAAGGGGGAAACTGAGGC...TGGGGTCTCTAAGGACCGTTTCCCGCCACTGGCCCCATTGTCACTGTCTCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp GCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGACAATGGGGCTCAGCGTGCCACAGTaGGGAGAGGAGAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ALYAAERPRRKAETVTMGLSVPQ*GEERSS
Trigger: GCTGCTTCTCTCCTCTCCCAACTGTGGCACGCTGAG...CCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS TCA 90 bp GACTCCTGCAGCTCCACGTCATGGGTGACCCCATGGATGATCCCGTaGATTACTGTGGGGAGGCATGTGGCTGCGGTAGGCATTCAGGGG +
Preference number: 5 (lower is better)
Translates to: DSCSSTSWVTPWMIP*ITVGRHVAAVGIQG
Trigger: CCCCTGAATGCCTACCGCAGCCACATGCCTCCCCACAGTAATTCACGGGATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219542.3
ENST00000564661.1
CDS-3UTR CAA 90 bp CGGAGCCTTGGGCTGTGGCTGTCCCAAACCTCACTGGCCCTTTATGCGGCTGAAGACCTCATGATCTGCTaGCCTGGGCCTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: RSLGLWLSQTSLALYAAEDLMIC*PGPPKV
Trigger: CACTTTGGGAGGCCCAGGCAAGCAGATCATGAGGTC...TTCAGCCGCATAAAGGGCCAGTGAGGTTTGGGACAGCCACAGCCCAAGGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp AGAGGAGCGGTCCTGTGCCTGAGCCCTCAGCGTGCCACAGTTGGGAGAGGAGAGCAGGTCCACAGCAGCTaGCGTGAACAGAGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: RGAVLCLSPQRATVGRGEQVHSS*REQSSY
Trigger: ATAAGAACTCTGTTCACGCAAGCTGCTGTGGACCTG...CTCTCCTCTCCCAACTGTGGCACGCTGAGGGCTCAGGCACAGGACCGCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp CGTCCACACCAGGCACTCTGCTGCTTGGCCTTTGGGCACTCTGCAGCCACCTGTGAAAGGGTAAGTCTCTaGCACGTGCAGTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RPHQALCCLAFGHSAATCERVSL*HVQWKS
Trigger: GGACTTCCACTGCACGTGCAAGAGACTTACCCTTTC...ACAGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGAGTGCCTGGTGTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp GCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACAGTGACAATGGGGGACGGTTTCACCATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: ALYAAERPRRKAETVTMGDGFTM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGGTGAAACCGTC...CCCCATTGTCACTGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS TCA 90 bp GACATATGCACCCCAGCATCTGGGACCCCTCTAGTTTCCCGGATCTaGGGTCTGAAGAGCAGCAGCCCAGCTAGGGTGATAGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: DICTPASGTPLVSRI*GLKSSSPARVIGSG
Trigger: CCCACTTCCTATCACCCTAGCTGGGCTGCTGCTCTTCAGACCTCAGATCCGGGAAACTAGAGGGGTCCCAGATGCTGGGGTGCATATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564661.1
CDS-3UTR CAA 90 bp GAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTGCTCCAAGACCCATTaGGGCACCGTGGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: EFLLIVPSPPKQWAHPPSCSKTH*GTVVLL
Trigger: CAGGAGCACCACGGTGCCCAAATGGGTCTTGGAGCA...GGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp AGGGCCCAGCCCAGGGTGTTTGTGAACAGGTGGACTTGGGTGTGGCTGAAAAGGTGTGTGAACTGGCACTaGCCTGGCGGTGTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RAQPRVFVNRWTWVWLKRCVNWH*PGGVCD
Trigger: ATCACAGACACCGCCAGGCAAGTGCCAGTTCACACA...CCTTTTCAGCCACACCCAAGTCCACCTGTTCACAAACACCCTGGGCTGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp AGGGTAAGTCTCTTGCACGTGCAGTGGAAGTCCCAGGGCGGCGCTGGAGGTGACTGCTCTCCCTCTCAGTaGCCAAATGGTCTTGAACAA +
Preference number: 5 (lower is better)
Translates to: RVSLLHVQWKSQGGAGGDCSPSQ*PNGLEQ
Trigger: TTGTTCAAGACCATTTGGCAACTGAGAGGGAGAGCA...GTCACCTCCAGCGCCGCCCTGGGACTTCCACTGCACGTGCAAGAGACTTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp CTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCCTACCAGAGAAAGGACCGTGTTaGTGGGCCCTGCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: LIDSPITSKAVGPPSLLPEKGPC*WALHSC
Trigger: ACAGCTGTGCAGGGCCCACAAACACGGTCCTTTCTC...TGGTAGGAGGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp CAAACCTCACTGGCCCTTTATGCGGCTGAAAGGCCGAGGAGGAAGGCGGAGACATGTGAACAGGTGGACTaGGGTGTGGCTGAAAAGGAG +
Preference number: 5 (lower is better)
Translates to: QTSLALYAAERPRRKAETCEQVD*GVAEKE
Trigger: CTCCTTTTCAGCCACACCCAAGTCCACCTGTTCACA...TGTCTCCGCCTTCCTCCTCGGCCTTTCAGCCGCATAAAGGGCCAGTGAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp ACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCTCCCTCTGCTGCTTGGCCTTaGGGCACTCTGCAGCCACCT +
Preference number: 5 (lower is better)
Translates to: TEFLLIVPSPPKQWAHPPSAAWP*GTLQPP
Trigger: AGGTGGCTGCAGAGTGCCCAAAGGCCAAGCAGCAGA...GGGAGGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp TGTAGGAAGCTGGCCAGAGAATCAGGGCAAGTGCCAAAGGTAAGGGGGTTGCTCTGTTTGCAGAAGTGTTaGGGCTGGGGGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: CRKLARESGQVPKVRGLLCLQKC*GWGQMD
Trigger: ATCCATCTGCCCCCAGCCCAAACACTTCTGCAAACA...GAGCAACCCCCTTACCTTTGGCACTTGCCCTGATTCTCTGGCCAGCTTCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS-3UTR CAA 90 bp GTGAACAGAGTTCTTATTGATAGTCCCATCACCTCCAAAGCAGTGGGCCCACCCAGTTGCCAAATGGTCTaGAACAAGATACCATTCCCC +
Preference number: 5 (lower is better)
Translates to: VNRVLIDSPITSKAVGPPSCQMV*NKIPFP
Trigger: GGGGAATGGTATCTTGTTCAAGACCATTTGGCAACT...GGGTGGGCCCACTGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568223.7
CDS GCA 72 bp AAGCGGAAGGCGGCCACGCGGCGGCTGATGTCCTGGTaGGGCGTGGCCTGCAGGAAGAGGGCCCGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: KRKAATRRLMSW*GVACRKRARRS
Trigger: CGAGCGCCGGGCCCTCTTCCTGCAGGCCACGCCGCACCAGGACATCAGCCGCCGCGTGGCCGCCTTCCGCTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219542.3
ENST00000567076.5
ENST00000568223.7
CDS CCA 72 bp GCACCTCCAAGGCAGGAATGCACACAGACGTGGGCCTaGGGGCCATGCCTAGCGATCAGCTGTCCTGGGCCG +
Preference number: 6 (lower is better)
Translates to: APPRQECTQTWA*GPCLAISCPGP
Trigger: CGGCCCAGGACAGCTGATCGCTAGGCATGGCCCCCAGGCCCACGTCTGTGTGCATTCCTGCCTTGGAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS CCA 72 bp GTGGGCCTGGGGGCCATGCCTAGCGATCAGCTGTCCTaGGCCGCCCTCCTGCACTCCCATCTGACATATGCA +
Preference number: 6 (lower is better)
Translates to: VGLGAMPSDQLS*AALLHSHLTYA
Trigger: TGCATATGTCAGATGGGAGTGCAGGAGGGCGGCCCAGGACAGCTGATCGCTAGGCATGGCCCCCAGGCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS TCA 72 bp ATCAGCTGTCCTGGGCCGCCCTCCTGCACTCCCATCTaGCATATGCACCCCAGCATCTGGGACCCCTCTAGT +
Preference number: 6 (lower is better)
Translates to: ISCPGPPSCTPI*HMHPSIWDPSS
Trigger: ACTAGAGGGGTCCCAGATGCTGGGGTGCATATGTCAGATGGGAGTGCAGGAGGGCGGCCCAGGACAGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564661.1
ENST00000568415.1
CDS GCA 72 bp AAAGCAGTGGGCCCACCCACAGTGATGACAGACTCCTaGAGCTCCACGTCATGGGTGACCCCATGGATGATC +
Preference number: 6 (lower is better)
Translates to: KAVGPPTVMTDS*SSTSWVTPWMI
Trigger: GATCATCCATGGGGTCACCCATGACGTGGAGCTGCAGGAGTCTGTCATCACTGTGGGTGGGCCCACTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567076.5