RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for METAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164024

Ensembl transcript IDs: ENST00000296411.11, ENST00000503247.5, ENST00000506238.5, ENST00000506548.1, ENST00000507537.5, ENST00000510107.5, ENST00000510133.5, ENST00000510209.5, ENST00000513097.1, ENST00000513199.5, ENST00000514051.1, ENST00000625963.1

Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTaGAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACAT +
Preference number: 1 (lower is better)
Translates to: KERCVSTHEGQLHLY*KVTVHKIPFSSLSH
Trigger: ATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR TCA 90 bp CAAAGATTCTCATTTCCAATGTTCACCTGGAAAGCAGATGGCTCTTaGTGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCAAGTT +
Preference number: 1 (lower is better)
Translates to: QRFSFPMFTWKADGS*WLFCGSDKSNYKQV
Trigger: AACTTGCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTTTCCAGGTGAACATTGGAAATGAGAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR-3UTR TCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCGCAGGGGGAGGGGGCTaGAGAGTTGAGCAATGTTTC +
Preference number: 2 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASAGGGG*RVEQCF
Trigger: GAAACATTGCTCAACTCTTCAGCCCCCTCCCCCTGC...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR-3UTR CCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACACACAGAGTCCACATTaGAGAAAGTCTCATTGGGTG +
Preference number: 2 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYTQSPH*RKSHWV
Trigger: CACCCAATGAGACTTTCTCCAATGTGGACTCTGTGT...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR TCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCAGGGGGCTGAAGAGTTaGGCAATGTTTCCTTTATTC +
Preference number: 2 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASRGLKS*AMFPLF
Trigger: GAATAAAGGAAACATTGCTCAACTCTTCAGCCCCCT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR-3UTR TCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCAGGGGGCTGAAGAGTTaGGCAATGTTTCCTTTATTC +
Preference number: 2 (lower is better)
Translates to: KQMALDGCFAAVIKATTSRGLKS*AMFPLF
Trigger: GAATAAAGGAAACATTGCTCAACTCTTCAGCCCCCT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR-3UTR TCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAGCAGGGGGAGGGGGCTaGAGAGTTGAGCAATGTTTC +
Preference number: 2 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSAGGGG*RVEQCF
Trigger: GAAACATTGCTCAACTCTTCAGCCCCCTCCCCCTGC...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR GCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACCAGGAATTAAATCACTaGAAACTATGGATCCATTTG +
Preference number: 2 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYQELNH*KLWIHL
Trigger: CAAATGGATCCATAGTTTGCAGTGATTTAATTCCTG...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCAGGACACACATCAAATaGTGTAGTCCTTTCTTATCT +
Preference number: 2 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASRTHIK*CSPFLS
Trigger: AGATAAGAAAGGACTACAGCATTTGATGTGTGTCCT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR-3UTR CCA 90 bp CTGTTCAGATTCAGACATTCCTGTGTTGCAAATTACCTATCTTCGCTGGGTGTCCCTTGTTGGCATCAGTaGATAATGTGGTCTGAGTTT +
Preference number: 2 (lower is better)
Translates to: LFRFRHSCVANYLSSLGVPCWHQ*IMWSEF
Trigger: AAACTCAGACCACATTATCCACTGATGCCAACAAGG...GACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTCTGAATCTGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
3UTR-3UTR TCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAAACTTCACGCTTCTCTaGGCACCTCCAAGGTATGCC +
Preference number: 2 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSNFTLL*APPRYA
Trigger: GGCATACCTTGGAGGTGCTCAGAGAAGCGTGAAGTT...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR TCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCTTATGTAGTAACTTGTaGGTAGCCCAACTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVLCSNL*VAQLPL
Trigger: TAAAGGAAGTTGGGCTACTCACAAGTTACTACATAA...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
3UTR-3UTR CCA 90 bp GACATTCCTGTGTTGCAAATTACCTATCTTCGCTGGGTGTCTCAGTATCATTATAGACGACCTGGTACTTaGTTTTCCATTCCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: DIPVLQITYLRWVSQYHYRRPGT*FSIPEL
Trigger: TAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCT...ATAATGATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503247.5
3UTR CAA 90 bp GGATTTCTTTATTTAATCCTCACACAAACCTATGATTCCAGCATCTaGGAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: GFLYLILTQTYDSSI*EVRLRITHGHKVWW
Trigger: CCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGATGCTGGAATCATAGGTTTGTGTGAGGATTAAATAAAGAAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
3UTR-3UTR GCA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATAGTATATCGATAACCTaGCCATGGGTCAGTATTAAT +
Preference number: 2 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNSISIT*PWVSIN
Trigger: ATTAATACTGACCCATGGGCAGGTTATCGATATACT...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
3UTR-3UTR GCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAGTGAGTGCTTCCCTATaGACAATTACAAGGGTAAAT +
Preference number: 2 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSVSASL*TITRVN
Trigger: ATTTACCCTTGTAATTGTGCATAGGGAAGCACTCAC...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR CAA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACATTTTAATAGCCCACTaGACCTCCTGGGTTCACAGC +
Preference number: 3 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYILIAH*TSWVHS
Trigger: GCTGTGAACCCAGGAGGTCAAGTGGGCTATTAAAAT...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR CAA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCCACACAGAGTCCACATaGGAGAAAGTCTCATTGGGT +
Preference number: 3 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLHTEST*EKVSLG
Trigger: ACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTG...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCTGGTGCAACACATATaGCTAAGTTTCAAAGATTCT +
Preference number: 3 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASLVQHI*LSFKDS
Trigger: AGAATCTTTGAAACTTAGCAATATGTGTTGCACCAG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
3UTR GCA 72 bp TGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTaGAAGGTTACAGTACACAAAATTCCTTTCTCATCA +
Preference number: 3 (lower is better)
Translates to: CVSTHEGQLHLY*KVTVHKIPFSS
Trigger: TGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR CAA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAGAAAGCAGATGGCTCTaGATGGCTGTTTTGCGGCAG +
Preference number: 3 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSESRWL*MAVLRQ
Trigger: CTGCCGCAAAACAGCCATCAAGAGCCATCTGCTTTC...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR CCA 72 bp TCAGACATTCCTGTGTTGCAAATTACCTATCTTCGCTaGGTGTCTCAGTATCATTATCTAAGGGATGATCAG +
Preference number: 3 (lower is better)
Translates to: SDIPVLQITYLR*VSQYHYLRDDQ
Trigger: CTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
3UTR-3UTR CAA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCATTGGAGAAAGTCTCATaGGGTGAGTGCTTCCCTATG +
Preference number: 3 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSLEKVS*GECFPM
Trigger: CATAGGGAAGCACTCACCCAATGAGACTTTCTCCAA...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
3UTR-3UTR CAA 90 bp GCAAGAATAGCCAGGAAAATTCTAAGGGATGATCAGCATAATCTGGTCTTTGAATATGATTCCAGCATCTaGGAGGTGAGACTTAGAATA +
Preference number: 3 (lower is better)
Translates to: ARIARKILRDDQHNLVFEYDSSI*EVRLRI
Trigger: TATTCTAAGTCTCACCTCCAAGATGCTGGAATCATA...TTCAAAGACCAGATTATGCTGATCATCCCTTAGAATTTTCCTGGCTATTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
3UTR-3UTR CAA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCACTGGTGCAACACATATaGCTAAGTTTCAAAGATTCT +
Preference number: 3 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSLVQHI*LSFKDS
Trigger: AGAATCTTTGAAACTTAGCAATATGTGTTGCACCAG...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACCCACGGCCGCCATGCTaGCTGCCCGCTGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYPRPPC*LPAGRA
Trigger: CGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGG...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCGGCCGCCATGCTGCCTaGCCGCTGGAAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLGRHAA*PLEERL
Trigger: GAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCC...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAGGCCGCCATGCTGCCTaGCCGCTGGAAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSGRHAA*PLEERL
Trigger: GAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCC...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507537.5
CDS-3UTR GCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGCCACGGCCGCCATGCTaGCTGCCCGCTGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLPRPPC*LPAGRA
Trigger: CGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGG...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507537.5
CDS-3UTR CCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACTGGGACACTGGAGCTTaGCCTCACTGCTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYWDTGA*PHCCSR
Trigger: ACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCA...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCTCTCCACGGCCGCCATaGTGCCTGCCCGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLSPRPP*CLPAGR
Trigger: TCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGGAGA...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCCTGGATGCCCAGCTTaGTGCAAGTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASPGCPA*CKWDTG
Trigger: TCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CTCCTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTGCTTGGCCTCACTGCTaGAGCCGTCTGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: LLLVSETTWYLVFHSRVTAWPHC*SRLSRT
Trigger: TGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGC...AGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR GCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGGGAGCTTGGCCTCACTaGTGCAGCCGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLGAWPH*CSRLSR
Trigger: GCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCC...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CCA 90 bp CTCCTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTGGGACACTGGAGCTTaGCCTCACTGCTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LLLVSETTWYLVFHSRVTWDTGA*PHCCSR
Trigger: ACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCA...AGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR TCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGCAGGGGGAGGGGGCTaGAGAGTTGAGCAATGTTTC +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSAGGGG*RVEQCF
Trigger: GAAACATTGCTCAACTCTTCAGCCCCCTCCCCCTGC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCGCTTGGCCTCACTGCTaGAGCCGTCTGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLAWPHC*SRLSRT
Trigger: TGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGC...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCGCTTGGCCTCACTGCTaGAGCCGTCTGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVAWPHC*SRLSRT
Trigger: TGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGC...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR GCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGGCTTGGCCTCACTGCTaGAGCCGTCTGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLAWPHC*SRLSRT
Trigger: TGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGC...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR GCA 90 bp AATCTGAGAAGTACCTTTAAGAGCCTGTGTTGCAAATTACCTATCTTCGCTGGGGGAGCTTGGCCTCACTaGTGCAGCCGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: NLRSTFKSLCCKLPIFAGGAWPH*CSRLSR
Trigger: GCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCC...CCCAGCGAAGATAGGTAATTTGCAACACAGGCTCTTAAAGGTACTTCTCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506238.5
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCATGAAGTGAGGCCGTaGACTGTCAAGTCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSHEVRP*TVKSPG
Trigger: ACCCGGCGACTTGACAGTGCACGGCCTCACTTCATG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCTGGGACACTGGAGCTTaGCCTCACTGCTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVWDTGA*PHCCSR
Trigger: ACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCA...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR TCA 90 bp CTGTTCAGATTCAGACATTCCTGTGTTGCAAATTACCTATCTTCGCTGGGTGTCCCTGGATGCCCAGCTTaGTGCAAGTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: LFRFRHSCVANYLSSLGVPGCPA*CKWDTG
Trigger: TCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGG...GACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTCTGAATCTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR TCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGCCTGGATGCCCAGCTTaGTGCAAGTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLPGCPA*CKWDTG
Trigger: TCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGG...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR TCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACCACTCATATGTGGTCTaGACAAGTTTCCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYHSYVV*TSFRAP
Trigger: TGGAGCACGGAAACTTGTTCAGACCACATATGAGTG...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCAGGGTGTGCTCAAACTaGGCAGACCGCTTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSRVCSN*ADRFPS
Trigger: AGACGGAAAGCGGTCTGCTCAGTTTGAGCACACCCT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATGGAGCTTGGCCTCACTaGTGCAGCCGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNGAWPH*CSRLSR
Trigger: GCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCC...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR GCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCCATGAAGTGAGGCCGTaGACTGTCAAGTCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLHEVRP*TVKSPG
Trigger: ACCCGGCGACTTGACAGTGCACGGCCTCACTTCATG...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCATGCAAGTGGGACACTaGAGCTTGGCCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSMQVGH*SLASLL
Trigger: CAGCAGTGAGGCCAAGCTCCAGTGTCCCACTTGCAT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp GACATTCCTGTGTTGCAAATTACCTATCTTCGCTGGGTGTCTCAGTATCATTATTGGGACACTGGAGCTTaGCCTCACTGCTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: DIPVLQITYLRWVSQYHYWDTGA*PHCCSR
Trigger: ACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCA...ATAATGATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR TCA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCCTGGATGCCCAGCTTaGTGCAAGTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNPGCPA*CKWDTG
Trigger: TCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGG...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR TCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCACTCATATGTGGTCTaGACAAGTTTCCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASHSYVV*TSFRAP
Trigger: TGGAGCACGGAAACTTGTTCAGACCACATATGAGTG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR TCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACATTAAAATTGAGACATaGAGTGAGGCCGTGCACTGT +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYIKIET*SEAVHC
Trigger: ACAGTGCACGGCCTCACTTCATGTCTCAATTTTAAT...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCAACTTCACGCTTCTCTaGGCACCTCCAAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLNFTLL*APPRYA
Trigger: GGCATACCTTGGAGGTGCTCAGAGAAGCGTGAAGTT...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCCTTTAAAACATTCCTaGGAGCAGAAGTACGAGCCC +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASPLKHS*EQKYEP
Trigger: GGGCTCGTACTTCTGCTCGCAGGAATGTTTTAAAGG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACCAGCTGCATCTCTACTaGAAGGTTACAGTACACAAA +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYQLHLY*KVTVHK
Trigger: TTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTG...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAA +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVQKYEP*MPSLMQ
Trigger: TTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTG...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAA +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLQKYEP*MPSLMQ
Trigger: TTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTG...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACTCGATAACCTGCCCATaGGTCAGTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYSITCP*VSINIT
Trigger: GGTGATATTAATACTGACCCATGGGCAGGTTATCGA...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCGCTTCACTGCATCAATaGCTTGCATCAGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASASLHQ*LASGTH
Trigger: ATGAGTGCCTGATGCAAGCCATTGATGCAGTGAAGC...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACAATGACTTCATTCACTaGGGTACAACAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYNDFIH*GTTRLW
Trigger: CCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATT...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp ATCTTGGAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTGGTGGAGCCAGCCTCACACAAACCTATaGTTCCAGCATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ILEVRLRITHGHKVWWSQPHTNL*FQHLGG
Trigger: ACCTCCAAGATGCTGGAATCATAGGTTTGTGTGAGG...CTGGCTCCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR GCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAGGAGCTTGGCCTCACTaGTGCAGCCGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSGAWPH*CSRLSR
Trigger: GCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCC...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCTGAACAAGTTTCCGTaGTCCATCATCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSLNKFP*SIIHFS
Trigger: GGAGAAGTGGATGATGGAGCACGGAAACTTGTTCAG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCACACGAAGGACAGCTaGATCTCTACTGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSHTKDS*ISTARL
Trigger: TAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp AATCTGAGAAGTACCTTTAAGAGCCTGTGTTGCAAATTACCTATCTTCGCTGGGCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAA +
Preference number: 4 (lower is better)
Translates to: NLRSTFKSLCCKLPIFAGQKYEP*MPSLMQ
Trigger: TTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTG...CCCAGCGAAGATAGGTAATTTGCAACACAGGCTCTTAAAGGTACTTCTCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506238.5
CDS-3UTR CCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCTTCAGTAGTTACACCTaGTTTAATCATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASFSSYT*FNHAGS
Trigger: GCTGCCGGCATGATTAAACCAGGTGTAACTACTGAA...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACTTGATATGTCTTCACTaGATACACTCCTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYLICLH*IHSYLD
Trigger: GTCCAAGTAGGAGTGTATCCAGTGAAGACATATCAA...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR TCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCATTAAAATTGAGACATaGAGTGAGGCCGTGCACTGT +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASIKIET*SEAVHC
Trigger: ACAGTGCACGGCCTCACTTCATGTCTCAATTTTAAT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGTCTCATTGGGTGAGTaGTTCCCTATGCACAATTAC +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSVSLGE*FPMHNY
Trigger: GTAATTGTGCATAGGGAAGCACTCACCCAATGAGAC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCACACAGAGTCCACATTaGAGAAAGTCTCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSTQSPH*RKSHWV
Trigger: CACCCAATGAGACTTTCTCCAATGTGGACTCTGTGT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR TCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCAGGGGGCTGAAGAGTTaGGCAATGTTTCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLRGLKS*AMFPLF
Trigger: GAATAAAGGAAACATTGCTCAACTCTTCAGCCCCCT...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCGTCTCATTGGGTGAGTaGTTCCCTATGCACAATTAC +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLVSLGE*FPMHNY
Trigger: GTAATTGTGCATAGGGAAGCACTCACCCAATGAGAC...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp CTTCCTTTAAAACATTCCCACAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGTCGATAACCTGCCCATaGGTCAGTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: LPLKHSHSLAPTCKRDDLSITCP*VSINIT
Trigger: GGTGATATTAATACTGACCCATGGGCAGGTTATCGA...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGTGGGAATGTTTTAAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCTTCAGTAGTTACACCTaGTTTAATCATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVFSSYT*FNHAGS
Trigger: GCTGCCGGCATGATTAAACCAGGTGTAACTACTGAA...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CCA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCATTCAGTAGTTACACCTaGTTTAATCATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSFSSYT*FNHAGS
Trigger: GCTGCCGGCATGATTAAACCAGGTGTAACTACTGAA...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000507537.5
CDS-3UTR CCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGAAAACCCATTTGCTTaGGCATGCTTCTGGATAATG +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSENPFA*ACFWIM
Trigger: CATTATCCAGAAGCATGCCCAAGCAAATGGGTTTTC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCTCAATTGTAAATACATaGCCCGACTTCATCACTCCA +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASSIVNT*PDFITP
Trigger: TGGAGTGATGAAGTCGGGCCATGTATTTACAATTGA...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CCA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCGGATACACTCCTACTTaGACAACTGCTGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLGYTPT*TTAERN
Trigger: GTTCCTTTCAGCAGTTGTCCAAGTAGGAGTGTATCC...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCTATTTTCTGCATCAATaGCTTGCATCAGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASYFLHQ*LASGTH
Trigger: ATGAGTGCCTGATGCAAGCCATTGATGCAGAAAATA...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514051.1
CDS-3UTR TCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAAGGGTGTGCTCAAACTaGGCAGACCGCTTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSRVCSN*ADRFPS
Trigger: AGACGGAAAGCGGTCTGCTCAGTTTGAGCACACCCT...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCAGTATATCGATAACCTaGCCATGGGTCAGTATTAAT +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASSISIT*PWVSIN
Trigger: ATTAATACTGACCCATGGGCAGGTTATCGATATACT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGTGAGTGCTTCCCTATaGACAATTACAAGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSVSASL*TITRVN
Trigger: ATTTACCCTTGTAATTGTGCATAGGGAAGCACTCAC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCAACTGCTTTATTTTCTaGATCAATGGCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASNCFIF*INGLHQ
Trigger: CTGATGCAAGCCATTGATGCAGAAAATAAAGCAGTT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514051.1
CDS-3UTR CCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGTCGATAACCTGCCCATaGGTCAGTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLSITCP*VSINIT
Trigger: GGTGATATTAATACTGACCCATGGGCAGGTTATCGA...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CCA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCATCGATAACCTGCCCATaGGTCAGTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSSITCP*VSINIT
Trigger: GGTGATATTAATACTGACCCATGGGCAGGTTATCGA...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCCCTTGTTGGCATCAGTaGATAATGTGGTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVPCWHQ*IMWSEF
Trigger: AAACTCAGACCACATTATCCACTGATGCCAACAAGG...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CCA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGCCTTGTTGGCATCAGTaGATAATGTGGTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLPCWHQ*IMWSEF
Trigger: AAACTCAGACCACATTATCCACTGATGCCAACAAGG...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CCA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCAGACGACCTGGTACTTaGTTTTCCATTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVRRPGT*FSIPEL
Trigger: TAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCT...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CCA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAAGACGACCTGGTACTTaGTTTTCCATTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSRRPGT*FSIPEL
Trigger: TAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCT...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR GCA 90 bp GCAAGAATAGCCAGGAAAATTCTAAGGGATGATCAGCATAATCTGGTCTTTGAACCTTTAAAACATTCCTaGGAGCAGAAGTACGAGCCC +
Preference number: 4 (lower is better)
Translates to: ARIARKILRDDQHNLVFEPLKHS*EQKYEP
Trigger: GGGCTCGTACTTCTGCTCGCAGGAATGTTTTAAAGG...TTCAAAGACCAGATTATGCTGATCATCCCTTAGAATTTTCCTGGCTATTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR GCA 90 bp CTCCTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTAGTATATCGATAACCTaGCCATGGGTCAGTATTAAT +
Preference number: 4 (lower is better)
Translates to: LLLVSETTWYLVFHSRVTSISIT*PWVSIN
Trigger: ATTAATACTGACCCATGGGCAGGTTATCGATATACT...AGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCTTCATCACTCCAACTaGTTTATTTTTAGCATAGTG +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASLHHSN*FIFSIV
Trigger: CACTATGCTAAAAATAAAGCAGTTGGAGTGATGAAG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCAGGACACACATCAAATaGTGTAGTCCTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSRTHIK*CSPFLS
Trigger: AGATAAGAAAGGACTACAGCATTTGATGTGTGTCCT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR GCA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCAGGAATTAAATCACTaGAAACTATGGATCCATTTG +
Preference number: 4 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASQELNH*KLWIHL
Trigger: CAAATGGATCCATAGTTTGCAGTGATTTAATTCCTG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCACAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAA +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSQKYEP*MPSLMQ
Trigger: TTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTG...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAAGTATATCGATAACCTaGCCATGGGTCAGTATTAAT +
Preference number: 4 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSSISIT*PWVSIN
Trigger: ATTAATACTGACCCATGGGCAGGTTATCGATATACT...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR GCA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCAGGAATTAAATCACTaGAAACTATGGATCCATTTG +
Preference number: 4 (lower is better)
Translates to: KQMALDGCFAAVIKATTSQELNH*KLWIHL
Trigger: CAAATGGATCCATAGTTTGCAGTGATTTAATTCCTG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CCA 90 bp GCAAGAATAGCCAGGAAAATTCTAAGGGATGATCAGCATAATCTGGTCTTTGAATTCAGTAGTTACACCTaGTTTAATCATGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARIARKILRDDQHNLVFEFSSYT*FNHAGS
Trigger: GCTGCCGGCATGATTAAACCAGGTGTAACTACTGAA...TTCAAAGACCAGATTATGCTGATCATCCCTTAGAATTTTCCTGGCTATTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CCA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATAGACGACCTGGTACTTaGTTTTCCATTCCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNRRPGT*FSIPEL
Trigger: TAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCT...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR GCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCACTGAACAAGTTTCCGTaGTCCATCATCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSLNKFP*SIIHFS
Trigger: GGAGAAGTGGATGATGGAGCACGGAAACTTGTTCAG...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAAACACCAGGCTTCACTaGATCAATGGCTTGCATCAG +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSNTRLH*INGLHQ
Trigger: CTGATGCAAGCCATTGATGCAGTGAAGCCTGGTGTT...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp TTCGCCTTTTCATCTTTATGCATGGTACACATGCTAAGCACTTCTCATGGATTTCCTTGTTGGCATCAGTaGATAATGTGGTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: FAFSSLCMVHMLSTSHGFPCWHQ*IMWSEF
Trigger: AAACTCAGACCACATTATCCACTGATGCCAACAAGG...AAATCCATGAGAAGTGCTTAGCATGTGTACCATGCATAAAGATGAAAAGGCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CCA 90 bp CATGGTACACATGCTAAGCACTTCTCATGGATTTCTTTATTTAATCCTCACACATCGATAACCTGCCCATaGGTCAGTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: HGTHAKHFSWISLFNPHTSITCP*VSINIT
Trigger: GGTGATATTAATACTGACCCATGGGCAGGTTATCGA...TGTGTGAGGATTAAATAAAGAAATCCATGAGAAGTGCTTAGCATGTGTACCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAAGGTCTGAGGCACTCTaGGAAAGATGTTCTCTTACA +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSRSEAL*ERCSLT
Trigger: TGTAAGAGAACATCTTTCCCAGAGTGCCTCAGACCT...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp TTCGCCTTTTCATCTTTATGCATGGTACACATGCTAAGCACTTCTCATGGATTTGGTCACAAAGTTTGGTaGAGCCAGTTTAAGACATTA +
Preference number: 4 (lower is better)
Translates to: FAFSSLCMVHMLSTSHGFGHKVW*SQFKTL
Trigger: TAATGTCTTAAACTGGCTCCACCAAACTTTGTGACC...AAATCCATGAGAAGTGCTTAGCATGTGTACCATGCATAAAGATGAAAAGGCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CCA 90 bp TTTCTTTATTTAATCCTCACACAAACCTATGATTCCAGCATCTTGGAGGTGAGACATGGTCACAAAGTTTaGTGGAGCCAGTTTAAGACA +
Preference number: 4 (lower is better)
Translates to: FLYLILTQTYDSSILEVRHGHKV*WSQFKT
Trigger: TGTCTTAAACTGGCTCCACCAAACTTTGTGACCATG...TCTCACCTCCAAGATGCTGGAATCATAGGTTTGTGTGAGGATTAAATAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CCA 90 bp TTTCTTTATTTAATCCTCACACAAACCTATGATTCCAGCATCTTGGAGGTGAGAGACATTCCCTGTTCCTaGACAGGAAGACTCAATATT +
Preference number: 4 (lower is better)
Translates to: FLYLILTQTYDSSILEVRDIPCS*TGRLNI
Trigger: AATATTGAGTCTTCCTGTCCAGGAACAGGGAATGTC...TCTCACCTCCAAGATGCTGGAATCATAGGTTTGTGTGAGGATTAAATAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
3UTR CAA 72 bp TATTTAATCCTCACACAAACCTATGATTCCAGCATCTaGGAGGTGAGACTTAGAATAACCCATGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: YLILTQTYDSSI*EVRLRITHGHK
Trigger: TTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGATGCTGGAATCATAGGTTTGTGTGAGGATTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR TCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAGTATTCCATGGCAAATaGCTTCATTCACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSVFHGK*LHSLRY
Trigger: GTACCTCAGTGAATGAAGTCATTTGCCATGGAATAC...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCACCTTGTTGGCATCAGTaGATAATGTGGTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSPCWHQ*IMWSEF
Trigger: AAACTCAGACCACATTATCCACTGATGCCAACAAGG...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp CATGGTACACATGCTAAGCACTTCTCATGGATTTCTTTATTTAATCCTCACACAAGTATATCGATAACCTaGCCATGGGTCAGTATTAAT +
Preference number: 4 (lower is better)
Translates to: HGTHAKHFSWISLFNPHTSISIT*PWVSIN
Trigger: ATTAATACTGACCCATGGGCAGGTTATCGATATACT...TGTGTGAGGATTAAATAAAGAAATCCATGAGAAGTGCTTAGCATGTGTACCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR TCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCATTATGTAGTAACTTGTaGGTAGCCCAACTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSLCSNL*VAQLPL
Trigger: TAAAGGAAGTTGGGCTACTCACAAGTTACTACATAA...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR GCA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCAAGGACACACATCAAATaGTGTAGTCCTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSRTHIK*CSPFLS
Trigger: AGATAAGAAAGGACTACAGCATTTGATGTGTGTCCT...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS GCA 90 bp TGCAGCCGTCTGTCTCGCACACCCGCGTCTCCACGGCCGCCATGCTaGCTGCCCGCTGGAAGAGCGCCTCACCGAGGAAGAGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: CSRLSRTPASPRPPC*LPAGRAPHRGRGGG
Trigger: GCCGCCGCCTCTTCCTCGGTGAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGGAGACGCGGGTGTGCGAGACAGACGGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510209.5
CDS GCA 90 bp TGCTGCAGCCGTCTGTCTCGCACACCCGCGTCTCCACGGCCGCCATaGTGCCTGCCCGCTGGAAGAGCGCCTCACCGAGGAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: CCSRLSRTPASPRPP*CLPAGRAPHRGRGG
Trigger: GCCGCCTCTTCCTCGGTGAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGGAGACGCGGGTGTGCGAGACAGACGGCTGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510209.5
CDS CCA 90 bp AGCCTCTGGTTCCTTCCACGTTGCTGCGAGCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAAGTGGGACACTGGAGCTTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLWFLPRCCEQKYEP*MPSLMQVGHWSLAS
Trigger: TGAGGCCAAGCTCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTGCTCGCAGCAACGTGGAAGGAACCAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
ENST00000625963.1
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGTGGGACACTGGAGCTaGGCCTCACTGCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSVGHWS*ASLLQP
Trigger: CGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCAC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp CTCCTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTGTGGGACACTGGAGCTaGGCCTCACTGCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LLLVSETTWYLVFHSRVTVGHWS*ASLLQP
Trigger: CGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCAC...AGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAGTGGGACACTGGAGCTaGGCCTCACTGCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSVGHWS*ASLLQP
Trigger: CGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCAC...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp GGAGAGGTGTGTTTCCACACACGAAGGACAGCTGCATCTCTACTGCAAGGTTACACCGCTTTCCGTCTCTaGTCACCGCAGTCCAACCAT +
Preference number: 5 (lower is better)
Translates to: GEVCFHTRRTAASLLQGYTAFRL*SPQSNH
Trigger: ATGGTTGGACTGCGGTGACAAGAGACGGAAAGCGGT...GTAACCTTGCAGTAGAGATGCAGCTGTCCTTCGTGTGTGGAAACACACCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCCCTGGATGCCCAGCTaGATGCAAGTGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSPWMPS*MQVGHW
Trigger: CCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGGG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATGTGGGACACTGGAGCTaGGCCTCACTGCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNVGHWS*ASLLQP
Trigger: CGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCAC...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCACCGCTTTCCGTCTCTaGTCACCGCAGTCCAACCAT +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASTAFRL*SPQSNH
Trigger: ATGGTTGGACTGCGGTGACAAGAGACGGAAAGCGGT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCGAAAGCAGATGGCTCTaGATGGCTGTTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASESRWL*MAVLRQ
Trigger: CTGCCGCAAAACAGCCATCAAGAGCCATCTGCTTTC...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp CTTCCTTTAAAACATTCCCACAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGCTGGTTCCTTCCACGTaGCTGCGAGCAGAAGTACGA +
Preference number: 5 (lower is better)
Translates to: LPLKHSHSLAPTCKRDDLLVPST*LRAEVR
Trigger: TCGTACTTCTGCTCGCAGCAACGTGGAAGGAACCAG...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGTGGGAATGTTTTAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGAAAGCAGATGGCTCTaGATGGCTGTTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSESRWL*MAVLRQ
Trigger: CTGCCGCAAAACAGCCATCAAGAGCCATCTGCTTTC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp CTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTGGTCCTGGTTCCTTCCACGTaGCTGCGAGCAGAAGTACGA +
Preference number: 5 (lower is better)
Translates to: LRWVSQYHYLRDDQHNLVLVPST*LRAEVR
Trigger: TCGTACTTCTGCTCGCAGCAACGTGGAAGGAACCAG...GACCAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCACTGGTTCCTTCCACGTaGCTGCGAGCAGAAGTACGA +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSLVPST*LRAEVR
Trigger: TCGTACTTCTGCTCGCAGCAACGTGGAAGGAACCAG...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCAACTGAAAACCCATTaGCTTGGGCATGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASQLKTH*LGHASG
Trigger: TCCAGAAGCATGCCCAAGCAAATGGGTTTTCAGTTG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCTTGGAGAAAGTCTCATaGGGTGAGTGCTTCCCTATG +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASLEKVS*GECFPM
Trigger: CATAGGGAAGCACTCACCCAATGAGACTTTCTCCAA...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCCACACAGAGTCCACATaGGAGAAAGTCTCATTGGGT +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASHTEST*EKVSLG
Trigger: ACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTG...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS TCA 90 bp AAGGTACTGAGATGTGCCATCTTGGGAGAAATTAAAATTGAGACATaGAGTGAGGCCGTGCACTGTCAAGTCGCCGGGTTAGGATTTCAC +
Preference number: 5 (lower is better)
Translates to: KVLRCAILGEIKIET*SEAVHCQVAGLGFH
Trigger: GTGAAATCCTAACCCGGCGACTTGACAGTGCACGGCCTCACTTCATGTCTCAATTTTAATTTCTCCCAAGATGGCACATCTCAGTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296411.11
ENST00000510133.5
ENST00000514051.1
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCGTCTTTGAATATAACTaGGCACTGGCCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSVFEYN*ALALLA
Trigger: TGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGAC...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp CTTCCTTTAAAACATTCCCACAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGGTCTTTGAATATAACTaGGCACTGGCCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LPLKHSHSLAPTCKRDDLVFEYN*ALALLA
Trigger: TGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGAC...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGTGGGAATGTTTTAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CAA 90 bp ATCTTGGAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTGGTGGAGCCAGGTCTTTGAATATAACTaGGCACTGGCCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: ILEVRLRITHGHKVWWSQVFEYN*ALALLA
Trigger: TGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGAC...CTGGCTCCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCTGGGAGAAATTAAAATaGAGACATGAAGTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASWEKLK*RHEVRP
Trigger: CGGCCTCACTTCATGTCTCAATTTTAATTTCTCCCA...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCTTGGAGAAAGTCTCATaGGGTGAGTGCTTCCCTATG +
Preference number: 5 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLLEKVS*GECFPM
Trigger: CATAGGGAAGCACTCACCCAATGAGACTTTCTCCAA...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATTTTAATAGCCCACTaGACCTCCTGGGTTCACAGC +
Preference number: 5 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLILIAH*TSWVHS
Trigger: GCTGTGAACCCAGGAGGTCAAGTGGGCTATTAAAAT...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp CCAACTTCCTTTAAAACATTCAGCTTAGCTCCTACTTGTAAGCGAGACGACCTGGTCTTTGAATATAACTaGGCACTGGCCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PTSFKTFSLAPTCKRDDLVFEYN*ALALLA
Trigger: TGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGAC...CAGGTCGTCTCGCTTACAAGTAGGAGCTAAGCTGAATGTTTTAAAGGAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAGTCTTTGAATATAACTaGGCACTGGCCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSVFEYN*ALALLA
Trigger: TGCCAACAAGGCCAGTGCCAAGTTATATTCAAAGAC...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp TTCACTGACACACAGAGTCCACATTGGAGAAAGTCTCATTGGGTGAGTGCTTCCAGCATAATCTGGTCTTaGAATATAACTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: FTDTQSPHWRKSHWVSASSIIWS*NITWHW
Trigger: CCAGTGCCAAGTTATATTCAAAGACCAGATTATGCT...GGAAGCACTCACCCAATGAGACTTTCTCCAATGTGGACTCTGTGTGTCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCTGGGAGAAATTAAAATaGAGACATGAAGTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLWEKLK*RHEVRP
Trigger: CGGCCTCACTTCATGTCTCAATTTTAATTTCTCCCA...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCCTGAGATGTGCCATCTaGGGAGAAATTAAAATTGAG +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSLRCAI*GEIKIE
Trigger: CTCAATTTTAATTTCTCCCAAGATGGCACATCTCAG...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000514051.1
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCATCAGACATTCCTGTGTaGCAAATTACCTATCTTCGC +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSSDIPV*QITYLR
Trigger: GCGAAGATAGGTAATTTGCAACACAGGAATGTCTGA...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAAGCATAATCTGGTCTTaGAATATAACTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSSIIWS*NITWHW
Trigger: CCAGTGCCAAGTTATATTCAAAGACCAGATTATGCT...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
CDS-3UTR CAA 90 bp AAGCAGATGGCTCTTGATGGCTGTTTTGCGGCAGTGATAAAAGCAACTACAAGCAAGGGTAGCAATTTCTaGCAATACATGCTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: KQMALDGCFAAVIKATTSKGSNF*QYMLSV
Trigger: TACACTTAGCATGTATTGCAAGAAATTGCTACCCTT...GCTTGTAGTTGCTTTTATCACTGCCGCAAAACAGCCATCAAGAGCCATCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS CCA 90 bp ATTCAGACATTCCCTGTTCCTGTGTTGCAAATTACCTATCTTCGCTaGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATCTG +
Preference number: 5 (lower is better)
Translates to: IQTFPVPVLQITYLR*VSQYHYLRDDQHNL
Trigger: CAGATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAACAGGGAATGTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510209.5
CDS CCA 90 bp AGCATCTTGGAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTaGTGGAGCCAGTTTAAGACATTACATAACACCTTCTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: SILEVRLRITHGHKV*WSQFKTLHNTFSLL
Trigger: AAGCAAAGAGAAGGTGTTATGTAATGTCTTAAACTGGCTCCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CAA 90 bp CTACTTGTAAGCGAGACGACCTGGTACTTGGTTTTCCATTCCAGAGTTACTTCAAAGGGTAGCAATTTCTaGCAATACATGCTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LLVSETTWYLVFHSRVTSKGSNF*QYMLSV
Trigger: TACACTTAGCATGTATTGCAAGAAATTGCTACCCTT...TGAAGTAACTCTGGAATGGAAAACCAAGTACCAGGTCGTCTCGCTTACAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507537.5
CDS-3UTR CAA 90 bp CGAAGGACAGCTGCATCTCTACTGCAAGGTTACAGTACACAAAATTCCTTTCTCCTGGTGCAACACATATaGCTAAGTTTCAAAGATTCT +
Preference number: 5 (lower is better)
Translates to: RRTAASLLQGYSTQNSFLLVQHI*LSFKDS
Trigger: AGAATCTTTGAAACTTAGCAATATGTGTTGCACCAG...GAGAAAGGAATTTTGTGTACTGTAACCTTGCAGTAGAGATGCAGCTGTCCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS TCA 90 bp TGTCACCTTCTTGTAAGGGCCTTCTGTCTGGTATTCCATGGCAAATaGCTTCATTCACTGAGGTACAACAAGACTTTGGGAAATTATAAT +
Preference number: 5 (lower is better)
Translates to: CHLLVRAFCLVFHGK*LHSLRYNKTLGNYN
Trigger: ATTATAATTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATTTGCCATGGAATACCAGACAGAAGGCCCTTACAAGAAGGTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296411.11
ENST00000510133.5
ENST00000513097.1
CDS CCA 90 bp ATCTTGGAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTGGTaGAGCCAGTTTAAGACATTACATAACACCTTCTCTTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: ILEVRLRITHGHKVW*SQFKTLHNTFSLLS
Trigger: AGAAAGCAAAGAGAAGGTGTTATGTAATGTCTTAAACTGGCTCCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTCCAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CAA 90 bp GACATTCCTGTGTTGCAAATTACCTATCTTCGCTGGGTGTCTCAGTATCATTATAGCATAATCTGGTCTTaGAATATAACTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: DIPVLQITYLRWVSQYHYSIIWS*NITWHW
Trigger: CCAGTGCCAAGTTATATTCAAAGACCAGATTATGCT...ATAATGATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503247.5
CDS-3UTR CAA 90 bp ACCTATCTTCGCTGGGTGTCTCAGTATCATTATCTAAGGGATGATCAGCATAATAGCATAATCTGGTCTTaGAATATAACTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: TYLRWVSQYHYLRDDQHNSIIWS*NITWHW
Trigger: CCAGTGCCAAGTTATATTCAAAGACCAGATTATGCT...ATTATGCTGATCATCCCTTAGATAATGATACTGAGACACCCAGCGAAGATAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503247.5
ENST00000506238.5
CDS-3UTR CAA 90 bp TTCGCCTTTTCATCTTTATGCATGGTACACATGCTAAGCACTTCTCATGGATTTAGCATAATCTGGTCTTaGAATATAACTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: FAFSSLCMVHMLSTSHGFSIIWS*NITWHW
Trigger: CCAGTGCCAAGTTATATTCAAAGACCAGATTATGCT...AAATCCATGAGAAGTGCTTAGCATGTGTACCATGCATAAAGATGAAAAGGCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS-3UTR CAA 90 bp GCAAGAATAGCCAGGAAAATTCTAAGGGATGATCAGCATAATCTGGTCTTTGAAGTCAACAGGATAATTTaGAGAACCAGACAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ARIARKILRDDQHNLVFEVNRII*RTRQAD
Trigger: ATCAGCTTGTCTGGTTCTCAAAATTATCCTGTTGAC...TTCAAAGACCAGATTATGCTGATCATCCCTTAGAATTTTCCTGGCTATTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS GCA 90 bp TTGAAAGTGTTAAATGGAGTAACACGTGCAAAGAACTTAGCACAGTaGCTAAGGGATGATCAGCATAATCTGGTCTTTGAATATAACTTG +
Preference number: 5 (lower is better)
Translates to: LKVLNGVTRAKNLAQ*LRDDQHNLVFEYNL
Trigger: CAAGTTATATTCAAAGACCAGATTATGCTGATCATCCCTTAGGCACTGTGCTAAGTTCTTTGCACGTGTTACTCCATTTAACACTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513199.5
CDS-3UTR CAA 90 bp ACTGCAAGGTTACAGTACACAAAATTCCTTTCTCATCACTATCACATTTACTCACTGAGATGTGCCATCTaGGGAGAAATTAAAATTGAG +
Preference number: 5 (lower is better)
Translates to: TARLQYTKFLSHHYHIYSLRCAI*GEIKIE
Trigger: CTCAATTTTAATTTCTCCCAAGATGGCACATCTCAG...TGAGTAAATGTGATAGTGATGAGAAAGGAATTTTGTGTACTGTAACCTTGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296411.11
CDS GCA 72 bp CGTCTGTCTCGCACACCCGCGTCTCCACGGCCGCCATaGTGCCTGCCCGCTGGAAGAGCGCCTCACCGAGGA +
Preference number: 6 (lower is better)
Translates to: RLSRTPASPRPP*CLPAGRAPHRG
Trigger: TCCTCGGTGAGGCGCTCTTCCAGCGGGCAGGCAGCATGGCGGCCGTGGAGACGCGGGTGTGCGAGACAGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510209.5
CDS CAA 72 bp TGGATGCCCAGCTTGATGCAAGTGGGACACTGGAGCTaGGCCTCACTGCTGCAGCCGTCTGTCTCGCACACC +
Preference number: 6 (lower is better)
Translates to: WMPSLMQVGHWS*ASLLQPSVSHT
Trigger: GGTGTGCGAGACAGACGGCTGCAGCAGTGAGGCCAAGCTCCAGTGTCCCACTTGCATCAAGCTGGGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296411.11
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
ENST00000510209.5
ENST00000625963.1
CDS TCA 72 bp CAGCCAGTGTCTGTGACCAGGAGGGTGTGCTCAAACTaGGCAGACCGCTTTCCGTCTCTTGTCACCGCAGTC +
Preference number: 6 (lower is better)
Translates to: QPVSVTRRVCSN*ADRFPSLVTAV
Trigger: GACTGCGGTGACAAGAGACGGAAAGCGGTCTGCTCAGTTTGAGCACACCCTCCTGGTCACAGACACTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296411.11
ENST00000510133.5
ENST00000514051.1
CDS CCA 72 bp TTCCTTCCACGTTGCTGCGAGCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAAGTGGGACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: FLPRCCEQKYEP*MPSLMQVGHWS
Trigger: GCTCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTGCTCGCAGCAACGTGGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503247.5
ENST00000506238.5
ENST00000507537.5
ENST00000625963.1
CDS CCA 72 bp CCTTTAAAACATTCCTGCGAGCAGAAGTACGAGCCCTaGATGCCCAGCTTGATGCAAGTGGGACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: PLKHSCEQKYEP*MPSLMQVGHWS
Trigger: GCTCCAGTGTCCCACTTGCATCAAGCTGGGCATCCAGGGCTCGTACTTCTGCTCGCAGGAATGTTTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296411.11
ENST00000510209.5
CDS TCA 72 bp AGATGTGCCATCTTGGGAGAAATTAAAATTGAGACATaGAGTGAGGCCGTGCACTGTCAAGTCGCCGGGTTA +
Preference number: 6 (lower is better)
Translates to: RCAILGEIKIET*SEAVHCQVAGL
Trigger: TAACCCGGCGACTTGACAGTGCACGGCCTCACTTCATGTCTCAATTTTAATTTCTCCCAAGATGGCACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296411.11
ENST00000510133.5
ENST00000514051.1
CDS GCA 72 bp TATGCAGTCATTAGAAGTAATGAAATTAGGTCGTGCTaGTCGTGTCAGTCAACACGGAGGCAGAGGAATCGG +
Preference number: 6 (lower is better)
Translates to: YAVIRSNEIRSC*SCQSTRRQRNR
Trigger: CCGATTCCTCTGCCTCCGTGTTGACTGACACGAGCAGCACGACCTAATTTCATTACTTCTAATGACTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506548.1
CDS GCA 72 bp AGCCTGTTCAGATTCAGACATTCCCTGTTCCTGTGTTaGAAATTACCTATCTTCGCTGGGTGTCTCAGTATC +
Preference number: 6 (lower is better)
Translates to: SLFRFRHSLFLC*KLPIFAGCLSI
Trigger: GATACTGAGACACCCAGCGAAGATAGGTAATTTGCAACACAGGAACAGGGAATGTCTGAATCTGAACAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510209.5
CDS GCA 72 bp ATCTATGCAGTCATTAGAAGTAATGAAATTAGGTCGTaGTGCTCGTGTCAGTCAACACGGAGGCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: IYAVIRSNEIRS*CSCQSTRRQRN
Trigger: ATTCCTCTGCCTCCGTGTTGACTGACACGAGCAGCACGACCTAATTTCATTACTTCTAATGACTGCATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506548.1
CDS CCA 72 bp ATTCAGACATTCCTCAGCAGTGTTGAAAGTGTTAAATaGAGTAACACGTGCAAAGAACTTAGCACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: IQTFLSSVESVK*SNTCKELSTVP
Trigger: AGGCACTGTGCTAAGTTCTTTGCACGTGTTACTCCATTTAACACTTTCAACACTGCTGAGGAATGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513199.5
CDS CCA 72 bp GAGGTGAGACTTAGAATAACCCATGGTCACAAAGTTTaGTGGAGCCAGTTTAAGACATTACATAACACCTTC +
Preference number: 6 (lower is better)
Translates to: EVRLRITHGHKV*WSQFKTLHNTF
Trigger: GAAGGTGTTATGTAATGTCTTAAACTGGCTCCACCAAACTTTGTGACCATGGGTTATTCTAAGTCTCACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510107.5
CDS GCA 72 bp TTAAATGGAGTAACACGTGCAAAGAACTTAGCACAGTaGCTAAGGGATGATCAGCATAATCTGGTCTTTGAA +
Preference number: 6 (lower is better)
Translates to: LNGVTRAKNLAQ*LRDDQHNLVFE
Trigger: TTCAAAGACCAGATTATGCTGATCATCCCTTAGGCACTGTGCTAAGTTCTTTGCACGTGTTACTCCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513199.5
CDS TCA 72 bp TCTGTCTGGTATTCCATGGCAAATGACTTCATTCACTaGGGTACAACAAGACTTTGGGAAATTATAATAATT +
Preference number: 6 (lower is better)
Translates to: SVWYSMANDFIH*GTTRLWEIIII
Trigger: AATTATTATAATTTCCCAAAGTCTTGTTGTACCTCAGTGAATGAAGTCATTTGCCATGGAATACCAGACAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296411.11
ENST00000510133.5
ENST00000513097.1