RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MET (Homo sapiens)

Ensembl gene IDs: ENSG00000105976

Ensembl transcript IDs: ENST00000318493.11, ENST00000397752.8, ENST00000422097.1, ENST00000436117.2, ENST00000454623.1, ENST00000456159.1, ENST00000495962.1

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTaGTCCGTGGCCTGTGGGACCAAGCCTCTGGTTCTGATGCTCTGT +
Preference number: 1 (lower is better)
Translates to: FGLQYDRSVVTAAGH*SVACGTKPLVLMLC
Trigger: ACAGAGCATCAGAACCAGAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR TCA 90 bp CTGTTCTGGGGCTGCCGCTCCTGTCCTGAGCATTACTATCTCTTCTaGGTTTTCTGTGATCAAGAAGCCCTCAATATTTCCTGCTTCAAT +
Preference number: 1 (lower is better)
Translates to: LFWGCRSCPEHYYLF*VFCDQEALNISCFN
Trigger: ATTGAAGCAGGAAATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAGAGATAGTAATGCTCAGGACAGGAGCGGCAGCCCCAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTACGGCTGCAGGCCATTaGTCCGTGGCCTGTGGGACC +
Preference number: 2 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLTAAGH*SVACGT
Trigger: GGTCCCACAGGCCACGGACCAATGGCCTGCAGCCGT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGCTATTCGGGAGGCTTaGGCCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QKFCFQLLARWEPATETEAIREA*AWEVEV
Trigger: AACCTCCACCTCCCAGGCTCAAGCCTCCCGAATAGC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGAGTGTTGTCACGGCTaGAGGCCATTGGTCCGTGGC +
Preference number: 2 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLECCHG*RPLVRG
Trigger: GCCACGGACCAATGGCCTGCAGCCGTGACAACACTC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGGCCTGTTCTGGGGCTaGCGCTCCTGTCCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRGLFWG*RSCPEH
Trigger: ATGCTCAGGACAGGAGCGGCAGCCCCAGAACAGGCC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACAGGCCATTGGTCCGTaGCCTGTGGGACCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLQAIGP*PVGPSL
Trigger: GAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATTGGTCCGTGGCCTGTaGGACCAAGCCTCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRLVRGL*DQASGS
Trigger: AGAACCAGAGGCTTGGTCCCACAGGCCACGGACCAA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGGCCTGTTCTGGGGCTaGCGCTCCTGTCCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVGLFWG*RSCPEH
Trigger: ATGCTCAGGACAGGAGCGGCAGCCCCAGAACAGGCC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCAGGCCATTGGTCCGTaGCCTGTGGGACCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVQAIGP*PVGPSL
Trigger: GAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTTGGTCCGTGGCCTGTaGGACCAAGCCTCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SSAAGIGSDKYLILRRITLVRGL*DQASGS
Trigger: AGAACCAGAGGCTTGGTCCCACAGGCCACGGACCAA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCTTCTGAGTTTTCTGTaGTCAAGAAGCCCTCAATAT +
Preference number: 2 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLLLSFL*SRSPQY
Trigger: ATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCTTCTGAGTTTTCTGTaGTCAAGAAGCCCTCAATAT +
Preference number: 2 (lower is better)
Translates to: QKFCFQLLARWEPATETELLSFL*SRSPQY
Trigger: ATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGAATTCTAAATGAGTaGCCTGTTCTGGGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLRILNE*PVLGLP
Trigger: CGGCAGCCCCAGAACAGGCCACTCATTTAGAATTCT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATTTTGGACTCCAATATaGCAGGAGTGTTGTCACGGC +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRFWTPI*QECCHG
Trigger: GCCGTGACAACACTCCTGTCATATTGGAGTCCAAAA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTAGGTGGAGGTTGCAGTaGGCTATGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: SSAAGIGSDKYLILRRITRWRLQ*AMITPL
Trigger: CAGTGGTGTGATCATAGCTCACTGCAACCTCCACCT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTGTGTGATGCTATTTTaGAACTTTGACTGTATTGCC +
Preference number: 2 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLCVMLF*NFDCIA
Trigger: GGCAATACAGTCAAAGTTTCAAAATAGCATCACACA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGCCCTCAATATTTCCTaGTTCAATTTCCCATATGAA +
Preference number: 2 (lower is better)
Translates to: QKFCFQLLARWEPATETEALNIS*FNFPYE
Trigger: TTCATATGGGAAATTGAAGCAGGAAATATTGAGGGC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATGCTGGGTTAACCCTTaGCTTCAAGTCCTGATGATG +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRCWVNP*LQVLMM
Trigger: CATCATCAGGACTTGAAGCCAAGGGTTAACCCAGCA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTAGGTGGAGGTTGCAGTaGGCTATGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVRWRLQ*AMITPL
Trigger: CAGTGGTGTGATCATAGCTCACTGCAACCTCCACCT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGTTTTGTTTCCAATTaGTTGCGAGGTGGGAACCTG +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSFVSN*LRGGNL
Trigger: CAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCAATTGCTTGCGAGGTaGGAACCTGCCACCGAGACA +
Preference number: 2 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVQLLAR*EPATET
Trigger: TGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGAGGGTGGGGTGTATTaGCAATCAGTACATTTCCTT +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQREGGVY*QSVHFL
Trigger: AAGGAAATGTACTGATTGCCAATACACCCCACCCTC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGGTGGGTGGATTTCTTaGGTCCAGGAGTTTGAAACC +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVGGWIS*VQEFET
Trigger: GGTTTCAAACTCCTGGACTCAAGAAATCCACCCACC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATCTACCTATGAGCTGTaGTTGGAACCAATGAACCTT +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSTYEL*LEPMNL
Trigger: AAGGTTCATTGGTTCCAATCACAGCTCATAGGTAGA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR CAA 90 bp ACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCTGTaGATGGGATGTTTCCCCGAGTTCTTTCTATTGATGCGTTCATGC +
Preference number: 2 (lower is better)
Translates to: TLQCSQECIYKCVVL*MGCFPEFFLLMRSC
Trigger: GCATGAACGCATCAATAGAAAGAACTCGGGGAAACATCCCATCAACAGGACTACACACTTGTATATACATTCTTGAGAACACTGCAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTTGAGTCCAGGAGTTTaGAACCAGCCTTGGCAACAT +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLSPGV*NQPWQH
Trigger: ATGTTGCCAAGGCTGGTTTCAAACTCCTGGACTCAA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTTGTTTCCAATTGCTTaGGAGGTGGGAACCTGCCAC +
Preference number: 2 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVLFPIA*EVGTCH
Trigger: GTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACTTCAATTTCCCATATaGAATCAAGTGGTACCTGAT +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRLQFPI*NQVVPD
Trigger: ATCAGGTACCACTTGATTTCATATGGGAAATTGAAG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATGTGTGATGCTATTTTaGAACTTTGACTGTATTGCC +
Preference number: 2 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRCVMLF*NFDCIA
Trigger: GGCAATACAGTCAAAGTTTCAAAATAGCATCACACA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTCTTTGCTCTACCTATaGGCTGTGATTGGAACCAAT +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVSLLYL*AVIGTN
Trigger: ATTGGTTCCAATCACAGCTCATAGGTAGAGCAAAGA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTGCTATTCCATCTAGGTaGAATAGCTGGGATTTTCAA +
Preference number: 2 (lower is better)
Translates to: SSAAGIGSDKYLILRRITAIPSR*NSWDFQ
Trigger: TTGAAAATCCCAGCTATTTCACCTAGATGGAATAGC...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCAAAATTCCACAGAATaGAGCATCACAAAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SSAAGIGSDKYLILRRITQNSTE*SITKFC
Trigger: GCAGAACTTTGTGATGCTTCATTCTGTGGAATTTTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGAGGGTGGGGTGTATTaGCAATCAGTACATTTCCTT +
Preference number: 2 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVEGGVY*QSVHFL
Trigger: AAGGAAATGTACTGATTGCCAATACACCCCACCCTC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGTTTACCTAATGGGTaGATGACACCATCAGTAATG +
Preference number: 2 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVCLPNG*MTPSVM
Trigger: CATTACTGATGGTGTCATTCACCCATTAGGTAAACA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTCTTTGCTCTACCTATaGGCTGTGATTGGAACCAAT +
Preference number: 2 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSLLYL*AVIGTN
Trigger: ATTGGTTCCAATCACAGCTCATAGGTAGAGCAAAGA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCTTCTGGTAAGTCTCTaGACTATCAGAGAGCTTTTA +
Preference number: 2 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVLLVSL*TIRELL
Trigger: TAAAAGCTCTCTGATAGTGCAGAGACTTACCAGAAG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR CCA 72 bp TGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTaGGACCAAGCCTCTGGTTCTGATGCTCTGTCAGAT +
Preference number: 3 (lower is better)
Translates to: CCHGCRPLVRGL*DQASGSDALSD
Trigger: ATCTGACAGAGCATCAGAACCAGAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR CCA 72 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTaGTCCGTGGCCTGTGGGACCAAGCCTCTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: QYDRSVVTAAGH*SVACGTKPLVL
Trigger: CAGAACCAGAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACACGGCTGCAGGCCATaGGTCCGTGGCCTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRHGCRP*VRGLWD
Trigger: GTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCACGGCTGCAGGCCATaGGTCCGTGGCCTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVHGCRP*VRGLWD
Trigger: GTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCCCAGAATTCAAGTTTaGGACTCCAATATGACAGGA +
Preference number: 3 (lower is better)
Translates to: QKFCFQLLARWEPATETEPRIQV*DSNMTG
Trigger: TCCTGTCATATTGGAGTCCAAAACTTGAATTCTGGG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR TCA 72 bp GGCTGCCGCTCCTGTCCTGAGCATTACTATCTCTTCTaGGTTTTCTGTGATCAAGAAGCCCTCAATATTTCC +
Preference number: 3 (lower is better)
Translates to: GCRSCPEHYYLF*VFCDQEALNIS
Trigger: GGAAATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAGAGATAGTAATGCTCAGGACAGGAGCGGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR TCA 72 bp AAATTCAACCCAGAATTCAAGTTTTGGACTCCAATATaGCAGGAGTGTTGTCACGGCTGCAGGCCATTGGTC +
Preference number: 3 (lower is better)
Translates to: KFNPEFKFWTPI*QECCHGCRPLV
Trigger: GACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAACTTGAATTCTGGGTTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAAGTTTTGTTTCCAATaGCTTGCGAGGTGGGAACCT +
Preference number: 3 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLKFCFQ*LARWEP
Trigger: AGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAACTCCCCAAAAGTTTaGTTTCCAATTGCTTGCGAG +
Preference number: 3 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRNSPKV*FPIACE
Trigger: CTCGCAAGCAATTGGAAACAAAACTTTTGGGGAGTT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR TCA 72 bp GCAAAGAATATCGATGGCCTTTTAAAGGTCAGGCAGTaGAAAAACCATTGGACAAAGTGTGGACTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: AKNIDGLLKVRQ*KNHWTKCGLLL
Trigger: AAGCAACAGTCCACACTTTGTCCAATGGTTTTTTCACTGCCTGACCTTTAAAAGGCCATCGATATTCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR TCA 72 bp ATCCATCCACCCTTTCTTTGCTCTACCTATGAGCTGTaGTTGGAACCAATGAACCTTTTAGTAAAATGTATC +
Preference number: 3 (lower is better)
Translates to: IHPPFLCSTYEL*LEPMNLLVKCI
Trigger: GATACATTTTACTAAAAGGTTCATTGGTTCCAATCACAGCTCATAGGTAGAGCAAAGAAAGGGTGGATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGCCAGGCGACCAGACTaGGGCGCTCGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEARRPD*GARLPA
Trigger: GGCGGGCAGGCGAGCGCCTCAGTCTGGTCGCCTGGC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGCCAGGCGACCAGACTaGGGCGCTCGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLARRPD*GARLPA
Trigger: GGCGGGCAGGCGAGCGCCTCAGTCTGGTCGCCTGGC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGCTATTCGGGAGGCTTaGGCCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGAIREA*AWEVEV
Trigger: AACCTCCACCTCCCAGGCTCAAGCCTCCCGAATAGC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGACTGAGGCGCTCGCCTaGCCGCCCCAGCACGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPTEALA*PPQHVS
Trigger: AGACACGTGCTGGGGCGGGCAGGCGAGCGCCTCAGT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGACGGCTGCAGGCCATTaGTCCGTGGCCTGTGGGACC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPTAAGH*SVACGT
Trigger: GGTCCCACAGGCCACGGACCAATGGCCTGCAGCCGT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCACGAGGATGCCAGGTaGAAGCACAGCGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPHEDAR*KHSGGL
Trigger: AAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGGAAAGACATGTCGCTaGCAGGTCCCTCTGTTGACG +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGGKTCR*QVPLLT
Trigger: CGTCAACAGAGGGACCTGCCAGCGACATGTCTTTCC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCAGATGAAAGGACTTTaGCTCCCAGGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGQMKGL*LPGRSP
Trigger: TGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTTGCTGCTGCAGTCCTaGCATGGGAAACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLLLQS*HGKQSG
Trigger: CCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTTCCCACACGCGCGCTaGCCTGCCAGTGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLFPHAR*PASDSA
Trigger: GGCTGAGTCACTGGCAGGGCAGCGCGCGTGTGGGAA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGGCAGACAGATCTGTTaGGTCCATGTCCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPGRQIC*VHVPLR
Trigger: CCTGAGCGGGACATGGACTCAACAGATCTGTCTGCC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGGCCCAATCACTACATaGTGCACTGCCTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPGPITT*CTAWTS
Trigger: GCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGGCAGATCGATCCATTaGTTCGGCAGAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGGRSIH*FGRIWL
Trigger: AAGCCAGATTCTGCCGAACCAATGGATCGATCTGCC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTACGTCAGGATAAGGTaGGGCTCCTCTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGYVRIR*GSSCHQ
Trigger: CTGATGACAAGAGGAGCCCCACCTTATCCTGACGTA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCATGAAGCGACCCTCTaGTGTCCCAAGATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGHEATL*CPKISY
Trigger: ATAGCTAATCTTGGGACATCAGAGGGTCGCTTCATG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGATCTTCACGGTAACTaGAGATGCTTGTCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGDLHGN*RCLSLG
Trigger: ACCGAGAGACAAGCATCTTCAGTTACCGTGAAGATC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGATAGTACTAGCACTATaGTGTCTCCCAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGIVLAL*CLPEGG
Trigger: GCCTCCTTCTGGGAGACATCATAGTGCTAGTACTAT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGTGCCCAGGAACCAGTaGAGAAGTCAGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLVPRNQ*RSQRRK
Trigger: CTTGCGCCGCTGACTTCTCCACTGGTTCCTGGGCAC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTGTAGAATGACATTCTaGATGGGTGTTTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGCRMTF*MGVSAV
Trigger: CACCGCGGAAACACCCATCCAGAATGTCATTCTACA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAGTCAGGACACTGGCTaGGCTCTTCTATCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPSQDTG*ALLSVG
Trigger: CCCCACAGATAGAAGAGCCCAGCCAGTGTCCTGACT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTGCGCTGCCCTGCCAGTaGCTCAGCCGGGCATCGGCG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITALPCQ*LSRASA
Trigger: CGCCGATGCCCGGCTGAGTCACTGGCAGGGCAGCGC...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGGTGTTTCCGCGGTaGAGTTGGGAAGCTGATACT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPWVFPR*SWEADT
Trigger: AGTATCAGCTTCCCAACTTCACCGCGGAAACACCCA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTTGCTGCTGCAGTCCTaGCATGGGAAACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLLLQS*HGKQSG
Trigger: CCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAGGACTTCGCTGAATTaGCCCATGAATAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGRTSLN*PMNKST
Trigger: CGTTGACTTATTCATGGGTCAATTCAGCGAAGTCCT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAAACCACAACCTGCATaGAGCGACCCTCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPKPQPA*SDPLMS
Trigger: GGACATCAGAGGGTCGCTTCATGCAGGTTGTGGTTT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAGGAGAAAATTCACATaGGGGGTTGATGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGRRKFT*GVDGPD
Trigger: ATCAGGACCATCAACCCCTCATGTGAATTTTCTCCT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTCTCGGGACACTAACTaGATTCAGGTTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGSRDTN*IQVFPN
Trigger: GTTGGGAAAAACCTGAATTCAGTTAGTGTCCCGAGA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCTGCCGCTCCTGTCCTaGGCATTACTATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLPLLS*ALLSLL
Trigger: CAGAAGAGATAGTAATGCTCAGGACAGGAGCGGCAG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAACTGAGGCGCTCGCCTaGCCGCCCCAGCACGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRTEALA*PPQHVS
Trigger: AGACACGTGCTGGGGCGGGCAGGCGAGCGCCTCAGT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGCCCAAGCCATTCAATaGGATCTTCGTGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGAQAIQ*DLRDLL
Trigger: AAGAAGATCACGAAGATCCCATTGAATGGCTTGGGC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCTCTTTGTAGCTTGCTaGGTTAACCCTTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLFVAC*VNPWLQ
Trigger: TTGAAGCCAAGGGTTAACCCAGCAAGCTACAAAGAG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCTGACATACGCAGCCTaGAGTATATTAAACACTTCC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLTYAA*SILNTS
Trigger: GGAAGTGTTTAATATACTTCAGGCTGCGTATGTCAG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGGGGCAGAGAGGCATTaGCTGCAGGACTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEGAERH*LQDWKC
Trigger: ACATTTCCAGTCCTGCAGTCAATGCCTCTCTGCCCC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGGGGCAGAGAGGCATTaGCTGCAGGACTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLGAERH*LQDWKC
Trigger: ACATTTCCAGTCCTGCAGTCAATGCCTCTCTGCCCC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGATGCCTTTGGCTACTTaGAGACCAAAGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGMPLAT*RPKPIR
Trigger: TCTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCAT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATTCCCACACGCGCGCTaGCCTGCCAGTGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLFPHAR*PASDSA
Trigger: GGCTGAGTCACTGGCAGGGCAGCGCGCGTGTGGGAA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAATAAGTCAACGCGCTaGAAAGCTGTGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGNKSTR*KAVVNS
Trigger: AGAGTTTACCACAGCTTTGCAGCGCGTTGACTTATT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCAGAGAGGCATTGACTaGAGGACTGGAAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPQRGID*RTGNVC
Trigger: GCAGACATTTCCAGTCCTGCAGTCAATGCCTCTCTG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCAACACCTGTTATTGTaGTCCCACCACTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPQHLLL*SHHWQS
Trigger: GCTTTGCCAGTGGTGGGAGCACAATAACAGGTGTTG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318493.11
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGTTTTCAGGGGGAGTTaGAGATTCAGCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPVFRGS*RFSCCR
Trigger: CCTGCAACAGCTGAATCTGCAACTCCCCCTGAAAAC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTTGTTTCCAATTGCTTaGGAGGTGGGAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLFPIA*EVGTCH
Trigger: GTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGGCAGATCGATCCATTaGTTCGGCAGAATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPGRSIH*FGRIWL
Trigger: AAGCCAGATTCTGCCGAACCAATGGATCGATCTGCC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGCGCTGCCCTGCCAGTaGCTCAGCCGGGCATCGGCG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVALPCQ*LSRASA
Trigger: CGCCGATGCCCGGCTGAGTCACTGGCAGGGCAGCGC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGTGAAGTTGGGAAGCTaGTACTTCATATTCACATTC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGVKLGS*YFIFTF
Trigger: GAATGTGAATATGAAGTATCAGCTTCCCAACTTCAC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGATCTTCACGGTAACTaGAGATGCTTGTCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPDLHGN*RCLSLG
Trigger: ACCGAGAGACAAGCATCTTCAGTTACCGTGAAGATC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGATTTTCATTGCCCATTaGGATCATCACTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGIFIAH*DHHWLF
Trigger: GAAAAGCCAGTGATGATCTCAATGGGCAATGAAAAT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTCCAACAAAGTCCCATaGTATACACAACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGSNKVP*YTQPKC
Trigger: GCATTTTGGTTGTGTATATCATGGGACTTTGTTGGA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGATAGTACTAGCACTATaGTGTCTCCCAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPIVLAL*CLPEGG
Trigger: GCCTCCTTCTGGGAGACATCATAGTGCTAGTACTAT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCTTCTGAGTTTTCTGTaGTCAAGAAGCCCTCAATAT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLLSFL*SRSPQY
Trigger: ATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAGGTGGAGGTTGCAGTaGGCTATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETERWRLQ*AMITPL
Trigger: CAGTGGTGTGATCATAGCTCACTGCAACCTCCACCT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACACGAGGATGCCAGGTaGAAGCACAGCGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLHEDAR*KHSGGL
Trigger: AAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTCCCCATTGCTCCTCTaGACCAAGGTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETESPLLL*TKVNRS
Trigger: GCTCCTGTTTACCTTGGTGCAGAGGAGCAATGGGGA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCCCTCCTTCAAGGGGTaGACTATTTGGGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPPSFKG*TIWENL
Trigger: AAGGTTTTCCCAAATAGTGCACCCCTTGAAGGAGGG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGACATGGGAAACAATCTaGGTGTTCCAGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETETWETI*VFQHRP
Trigger: GGGCCTGTGCTGGAACACCCAGATTGTTTCCCATGT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACAGGCCATTGGTCCGTaGCCTGTGGGACCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRQAIGP*PVGPSL
Trigger: GAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGGGCCCCAGGCTTGCTaGCATACGCAGCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRGPQAC*HTQPEV
Trigger: TACTTCAGGCTGCGTATGTCAGCAAGCCTGGGGCCC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGGGCCCCAGGCTTGCTaGCATACGCAGCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLGPQAC*HTQPEV
Trigger: TACTTCAGGCTGCGTATGTCAGCAAGCCTGGGGCCC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATGGCACCAGCCACACTaGACAAAGGGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLWHQPH*TKGGAE
Trigger: CTCTGCCCCACCCTTTGTTCAGTGTGGCTGGTGCCA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGAGTCTCATTTCGAATaGAATTTCGAAGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGESHFE*NFEDLH
Trigger: ATGGAGATCTTCGAAATTTCATTCGAAATGAGACTC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGCTATTCGGGAGGCTTaGGCCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRAIREA*AWEVEV
Trigger: AACCTCCACCTCCCAGGCTCAAGCCTCCCGAATAGC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGGTGGGTGGATTTCTTaGGTCCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLGGWIS*VQEFET
Trigger: GGTTTCAAACTCCTGGACTCAAGAAATCCACCCACC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTTGCAAGATATTTCATaGCTTTGGCTACTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLQDIS*LWLLED
Trigger: GTCTTCAAGTAGCCAAAGGCATGAAATATCTTGCAA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTACACAGTCAGGACACTaGCTGGGCTCTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLTQSGH*LGSSIC
Trigger: ACAGATAGAAGAGCCCAGCCAGTGTCCTGACTGTGT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAGCAGTGCTCATGATTaGGTCCGTAAAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPSSAHD*VRKNAG
Trigger: TCCAGCATTTTTACGGACCCAATCATGAGCACTGCT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCACTTCTGGAGACACTaGATGGGAGTCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLHFWRH*MGVQEK
Trigger: TTTCTCCTGGACTCCCATCCAGTGTCTCCAGAAGTG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCTCCACAATCACTTCTaGAGACACTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLLHNHF*RHWMGV
Trigger: GACTCCCATCCAGTGTCTCCAGAAGTGATTGTGGAG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCCCTCGGTCAGAAATTaGGAAACTTCTCCTATGTCA +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPPSVRN*ETSPMS
Trigger: TGACATAGGAGAAGTTTCCCAATTTCTGACCGAGGG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAGAATTCTAAATGAGTaGCCTGTTCTGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETERILNE*PVLGLP
Trigger: CGGCAGCCCCAGAACAGGCCACTCATTTAGAATTCT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTAACAGCAAACTCAGTTaGAATGGTTTGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLNSKLS*NGLGWG
Trigger: ACCCCAGCCCAAACCATTTCAACTGAGTTTGCTGTT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTTTTGGACTCCAATATaGCAGGAGTGTTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEFWTPI*QECCHG
Trigger: GCCGTGACAACACTCCTGTCATATTGGAGTCCAAAA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAGGTTTATCTTTCGGTaGCCAGGAACCAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETERFIFR*PGTSGE
Trigger: TTCTCCACTGGTTCCTGGGCACCGAAAGATAAACCT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAATTGGCTTTGCTGCTaGAGTCCTGACATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETENWLCC*SPDMGN
Trigger: GTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCCCTCCTTCAAGGGGTaGACTATTTGGGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEPSFKG*TIWENL
Trigger: AAGGTTTTCCCAAATAGTGCACCCCTTGAAGGAGGG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGATGTGGACAGTATTTTaGAGTAATGGACTGGATATA +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGMWTVF*SNGLDI
Trigger: TATATCCAGTCCATTACTGCAAAATACTGTCCACAT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTGTGGACAAACTTTTTaGTTGCAAGATATTTCATGC +
Preference number: 4 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGCGQTF*LQDISC
Trigger: GCATGAAATATCTTGCAAGCAAAAAGTTTGTCCACA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGGGCTCTTCTATCTGTaGGGAGAATATGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLGLFYL*GEYAVN
Trigger: GTTCACTGCATATTCTCCCCACAGATAGAAGAGCCC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAGCCATCCACTTCACTaGCAGCTTTGCACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETESHPLH*QLCTCF
Trigger: AAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCAGTTCAGAAAAGGATaGGCGCATTTCGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEQFRKG*AHFGFR
Trigger: CCTAAAGCCGAAATGCGCCCATCCTTTTCTGAACTG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCAGGCCATTGGTCCGTaGCCTGTGGGACCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITQAIGP*PVGPSL
Trigger: GAGGCTTGGTCCCACAGGCCACGGACCAATGGCCTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTACAAGCCTATCCAAATaGGGAGTGTGTACTCTTGCA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLTSLSK*GVCTLA
Trigger: TGCAAGAGTACACACTCCTCATTTGGATAGGCTTGT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGAGAGGACATTGGGATaGCTAAAATCTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPERTLG*LKSFMM
Trigger: CATCATGAAAGATTTTAGTCATCCCAATGTCCTCTC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCTTCTGAGTTTTCTGTaGTCAAGAAGCCCTCAATAT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLLSFL*SRSPQY
Trigger: ATATTGAGGGCTTCTTGATCACAGAAAACTCAGAAG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCTGATAAATTGGCTTTaGTGCTGCAGTCCTGACATG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETELINWL*CCSPDM
Trigger: CATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTATCTGGCTTGCTTTGTaGGAACACCCCGAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLIWLAL*EHPEKN
Trigger: ATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGAT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTAGAGCGATGTTGACATaGCACTGTAAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLRAMLT*HCKVPS
Trigger: GGAAGGAACTTTACAGTGGCATGTCAACATCGCTCT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCTTCTGGTAAGTCTCTaGACTATCAGAGAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLLVSL*TIRELL
Trigger: TAAAAGCTCTCTGATAGTGCAGAGACTTACCAGAAG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGCACTGAGGTCAATGTaGACAGTATTTTGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPALRSM*TVFCSN
Trigger: ATTACTGCAAAATACTGTCCACATTGACCTCAGTGC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCCCTCGGTCAGAAATTaGGAAACTTCTCCTATGTCA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLPSVRN*ETSPMS
Trigger: TGACATAGGAGAAGTTTCCCAATTTCTGACCGAGGG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGCAGCCAAGTCTCTGTaGACAAACTTTTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLAAKSL*TNFLLA
Trigger: TGCAAGCAAAAAGTTTGTCCACAGAGACTTGGCTGC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTAAGTTCTGCTCAGGGTaGCTATTCCATCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLKFCSG*LFHLGE
Trigger: TTCACCTAGATGGAATAGCCACCCTGAGCAGAACTT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGAGGGTGGGGTGTATTaGCAATCAGTACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEEGGVY*QSVHFL
Trigger: AAGGAAATGTACTGATTGCCAATACACCCCACCCTC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCTGACATACGCAGCCTaGAGTATATTAAACACTTCC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETELTYAA*SILNTS
Trigger: GGAAGTGTTTAATATACTTCAGGCTGCGTATGTCAG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGACAACAGATTATCTCTaGATTAGAGCGATGTTGACA +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPTTDYL*IRAMLT
Trigger: TGTCAACATCGCTCTAATTCAGAGATAATCTGTTGT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTTTTCCAAGGACGGTTaGAGAAATTGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLFSKDG*RNCLLP
Trigger: TGGAAGCAAGCAATTTCTTCAACCGTCCTTGGAAAA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAAAGGACCACACATCTaGCTTGGTGGTAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEKGPHI*LGGKLL
Trigger: CAAAAGTTTACCACCAAGTCAGATGTGTGGTCCTTT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTGTGGACTGTTGCTTTaGCATAGTACTAGCACTATG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETECGLLL*HSTSTM
Trigger: CATAGTGCTAGTACTATGTCAAAGCAACAGTCCACA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCTTCAATTTCCCATATaGAATCAAGTGGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPLQFPI*NQVVPD
Trigger: ATCAGGTACCACTTGATTTCATATGGGAAATTGAAG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGTGTGATGCTATTTTaGAACTTTGACTGTATTGCC +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPCVMLF*NFDCIA
Trigger: GGCAATACAGTCAAAGTTTCAAAATAGCATCACACA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTCTTTGCTCTACCTATaGGCTGTGATTGGAACCAAT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLSLLYL*AVIGTN
Trigger: ATTGGTTCCAATCACAGCTCATAGGTAGAGCAAAGA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATCCCCATTGCTCCTCTaGACCAAGGTAAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSPLLL*TKVNRS
Trigger: GCTCCTGTTTACCTTGGTGCAGAGGAGCAATGGGGA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAATAAGTCAACGCGCTaGAAAGCTGTGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETENKSTR*KAVVNS
Trigger: AGAGTTTACCACAGCTTTGCAGCGCGTTGACTTATT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCACTTAAAGTCAAGGTaGAGCTCTCATTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLHLKSR*SSHFQG
Trigger: TCCTTGGAAATGAGAGCTGCACCTTGACTTTAAGTG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTCAATGTATTCATCGTaGTCTCACTTAAAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPSMYSS*SHLKSR
Trigger: CCTTGACTTTAAGTGAGAGCACGATGAATACATTGA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTGGCAGGACCAACTGTaGATTTCAATGTATTCATCG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEWQDQL*ISMYSS
Trigger: CGATGAATACATTGAAATGCACAGTTGGTCCTGCCA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGGCCTGTTCTGGGGCTaGCGCTCCTGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVGLFWG*RSCPEH
Trigger: ATGCTCAGGACAGGAGCGGCAGCCCCAGAACAGGCC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCAAACTCAGTTGAAATaGTTTGGGCTGGGGTATAAC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEQTQLK*FGLGYN
Trigger: GTTATACCCCAGCCCAAACCATTTCAACTGAGTTTG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCTCCCAGAAGGAGGCTaGTCGTGTGTCCACCTCATC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITLPEGG*SCVHLI
Trigger: GATGAGGTGGACACACGACCAGCCTCCTTCTGGGAG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACGGGGGCCTTCATTATaGGAGGTTTATCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLRGPSL*EVYLSV
Trigger: CACCGAAAGATAAACCTCTCATAATGAAGGCCCCCG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTACTCAGCAACCTTCTaGAGGTCTTCCTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEYSATF*RSSSFK
Trigger: TTTAAATGAGGAAGACCTTCAGAAGGTTGCTGAGTA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTGGCACCAGCCACACTaGACAAAGGGTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVWHQPH*TKGGAE
Trigger: CTCTGCCCCACCCTTTGTTCAGTGTGGCTGGTGCCA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCAGCAATCAATCCTGTaGAATTCTGATCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLQQSIL*NSDLVE
Trigger: TTCAACCAGATCAGAATTTCACAGGATTGATTGCTG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCTTCTCCTATGTCAGTaGTTCTGTTCAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLLLLCQ*FCSRIS
Trigger: TGAAATCCTTGAACAGAATCACTGACATAGGAGAAG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGTAGAGAAGATCGCTaGTATCCGGGACACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSREDR*YPGHQF
Trigger: GAACTGGTGTCCCGGATATCAGCGATCTTCTCTACT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGTAGAGAAGATCGCTaGTATCCGGGACACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLSREDR*YPGHQF
Trigger: GAACTGGTGTCCCGGATATCAGCGATCTTCTCTACT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGGTGGGTGGATTTCTTaGGTCCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRGGWIS*VQEFET
Trigger: GGTTTCAAACTCCTGGACTCAAGAAATCCACCCACC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCAAAATTCCACAGAATaGAGCATCACAAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLQNSTE*SITKFC
Trigger: GCAGAACTTTGTGATGCTTCATTCTGTGGAATTTTG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCGGCAGAATCTGGCTTaGTTTGTGCGAACACCCCGA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITRQNLA*FVRTPR
Trigger: TCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGATATTTGATAGGGAATaGACACATGGCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEIFDRE*THGRSI
Trigger: GATCGATCTGCCATGTGTGCATTCCCTATCAAATAT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACGAGAAACCACAACCTaGATGAAGCGACCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRRETTT*MKRPSD
Trigger: ATCAGAGGGTCGCTTCATGCAGGTTGTGGTTTCTCG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACAGAGAGGCATTGACTaGAGGACTGGAAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLQRGID*RTGNVC
Trigger: GCAGACATTTCCAGTCCTGCAGTCAATGCCTCTCTG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATCTGTCAGAGGATACTaGACTTGTCGGCATGAACCG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSVRGY*TCRHEP
Trigger: CGGTTCATGCCGACAAGTGCAGTATCCTCTGACAGA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGGCCCAATCACTACATaGTGCACTGCCTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVGPITT*CTAWTS
Trigger: GCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGATTTCGGCTTTAGGGTaGCAGCATTTTAGCATTACT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEISALG*QHFSIT
Trigger: AGTAATGCTAAAATGCTGGCACCCTAAAGCCGAAAT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTATTTCGGCTTTAGGGTaGCAGCATTTTAGCATTACT +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLISALG*QHFSIT
Trigger: AGTAATGCTAAAATGCTGGCACCCTAAAGCCGAAAT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGAGTGTTGTCACGGCTaGAGGCCATTGGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLECCHG*RPLVRG
Trigger: GCCACGGACCAATGGCCTGCAGCCGTGACAACACTC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGTGCCCAGGAACCAGTaGAGAAGTCAGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLVPRNQ*RSQRRK
Trigger: CTTGCGCCGCTGACTTCTCCACTGGTTCCTGGGCAC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGCACAATCAGGCTACTaGGCCCAATCACTACATGCT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLAQSGY*AQSLHA
Trigger: AGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATACGTCAGGATAAGGTaGGGCTCCTCTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRYVRIR*GSSCHQ
Trigger: CTGATGACAAGAGGAGCCCCACCTTATCCTGACGTA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCAATTGCTTGCGAGGTaGGAACCTGCCACCGAGACA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITQLLAR*EPATET
Trigger: TGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCCGGTCCTTTACAGATaGAAGGACTTTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITPVLYR*KDFGSQ
Trigger: CTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGGCAGACAGATCTGTTaGGTCCATGTCCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLGRQIC*VHVPLR
Trigger: CCTGAGCGGGACATGGACTCAACAGATCTGTCTGCC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATTTTGGACTCCAATATaGCAGGAGTGTTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLFWTPI*QECCHG
Trigger: GCCGTGACAACACTCCTGTCATATTGGAGTCCAAAA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATTGAGTCCAGGAGTTTaGAACCAGCCTTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRLSPGV*NQPWQH
Trigger: ATGTTGCCAAGGCTGGTTTCAAACTCCTGGACTCAA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAATTGGCTTTGCTGCTaGAGTCCTGACATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLNWLCC*SPDMGN
Trigger: GTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGGACTGGAAATGTCTaGAGCCCAAGCCATTCAATG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRRTGNV*SPSHSM
Trigger: CATTGAATGGCTTGGGCTGCAGACATTTCCAGTCCT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTCAATGTATTCATCGTaGTCTCACTTAAAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLSMYSS*SHLKSR
Trigger: CCTTGACTTTAAGTGAGAGCACGATGAATACATTGA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATGCAGATTCAGCTGTTaGAGGGAAGGAGTGGTACAA +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLCRFSC*REGVVQ
Trigger: TTGTACCACTCCTTCCCTGCAACAGCTGAATCTGCA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGCACTTCACCTTTAACTaGTTCAGGGTCAATATCATT +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEHFTFN*FRVNII
Trigger: AATGATATTGACCCTGAAGCAGTTAAAGGTGAAGTG...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGGTCATTGGGGACCGTaGATAAAACGGCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLGHWGP*IKRLQN
Trigger: ATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCCAATCACTACATGCTaGACTGCCTGGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITPITTC*TAWTSS
Trigger: AGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTATACACAACCAAAATaGCCTCTTCCTATGACTTCA +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEYTQPK*PLPMTS
Trigger: TGAAGTCATAGGAAGAGGGCATTTTGGTTGTGTATA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACACCTCCTGATAAATTaGCTTTGCTGCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLHLLIN*LCCCSP
Trigger: AGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGGGCTCTTCTATCTGTaGGGAGAATATGCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLGLFYL*GEYAVN
Trigger: GTTCACTGCATATTCTCCCCACAGATAGAAGAGCCC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACTCCCAGAAGGAGGCTaGTCGTGTGTCCACCTCATC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLLPEGG*SCVHLI
Trigger: GATGAGGTGGACACACGACCAGCCTCCTTCTGGGAG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATGCTGGGTTAACCCTTaGCTTCAAGTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLCWVNP*LQVLMM
Trigger: CATCATCAGGACTTGAAGCCAAGGGTTAACCCAGCA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTGGGGAGAATATGCAGTaGACCTCCGACTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITGENMQ*TSDCMS
Trigger: TGACATACAGTCGGAGGTTCACTGCATATTCTCCCC...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCCGGTCCTTTACAGATaGAAGGACTTTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVPVLYR*KDFGSQ
Trigger: CTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGGACTTCGCTGAATTaGCCCATGAATAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLRTSLN*PMNKST
Trigger: CGTTGACTTATTCATGGGTCAATTCAGCGAAGTCCT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCTGCCGCTCCTGTCCTaGGCATTACTATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLPLLS*ALLSLL
Trigger: CAGAAGAGATAGTAATGCTCAGGACAGGAGCGGCAG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACTGATAAATTGGCTTTaGTGCTGCAGTCCTGACATG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRLINWL*CCSPDM
Trigger: CATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACGGCAGAATCTGGCTTaGTTTGTGCGAACACCCCGA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLRQNLA*FVRTPR
Trigger: TCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGAGCGATGTTGACATaGCACTGTAAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRRAMLT*HCKVPS
Trigger: GGAAGGAACTTTACAGTGGCATGTCAACATCGCTCT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTATGTGGACAGTATTTTaGAGTAATGGACTGGATATA +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLMWTVF*SNGLDI
Trigger: TATATCCAGTCCATTACTGCAAAATACTGTCCACAT...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCCAATCACTACATGCTaGACTGCCTGGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVPITTC*TAWTSS
Trigger: AGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGTTTTGTTTCCAATTaGTTGCGAGGTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLSFVSN*LRGGNL
Trigger: CAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGCATCACAAAGTTCTaGTCAGGGTGGCTATTCCAT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLSITKF*SGWLFH
Trigger: ATGGAATAGCCACCCTGAGCAGAACTTTGTGATGCT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGGAAAGACATGTCGCTaGCAGGTCCCTCTGTTGACG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVGKTCR*QVPLLT
Trigger: CGTCAACAGAGGGACCTGCCAGCGACATGTCTTTCC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAGTCAGGACACTGGCTaGGCTCTTCTATCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSQDTG*ALLSVG
Trigger: CCCCACAGATAGAAGAGCCCAGCCAGTGTCCTGACT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACAGATGAAAGGACTTTaGCTCCCAGGGCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLQMKGL*LPGRSP
Trigger: TGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTGGTTCGGCAGAATCTaGCTTGCTTTGTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITWFGRI*LALCEH
Trigger: GTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGCAGTGCTCATGATTaGGTCCGTAAAAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSSAHD*VRKNAG
Trigger: TCCAGCATTTTTACGGACCCAATCATGAGCACTGCT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTATTGTGTTGTCCCGTaGCCATTTGAAATAATTATG +
Preference number: 4 (lower is better)
Translates to: QKFCFQLLARWEPATETEYCVVP*PFEIIM
Trigger: CATAATTATTTCAAATGGCCACGGGACAACACAATA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTATTGTGTTGTCCCGTaGCCATTTGAAATAATTATG +
Preference number: 4 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLYCVVP*PFEIIM
Trigger: CATAATTATTTCAAATGGCCACGGGACAACACAATA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGTTGCAGGGAAGGAGTaGTACAACAGATTATCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRVAGKE*YNRLSL
Trigger: CAGAGATAATCTGTTGTACCACTCCTTCCCTGCAAC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGTTGCAGGGAAGGAGTaGTACAACAGATTATCTCTG +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLVAGKE*YNRLSL
Trigger: CAGAGATAATCTGTTGTACCACTCCTTCCCTGCAAC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAACCATTTCTGTAGTTaGGCTTACACTTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLNHFCS*AYTSGT
Trigger: AGTGCCCGAAGTGTAAGCCCAACTACAGAAATGGTT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGGGGAGAATATGCAGTaGACCTCCGACTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVGENMQ*TSDCMS
Trigger: TGACATACAGTCGGAGGTTCACTGCATATTCTCCCC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCATGAAGCGACCCTCTaGTGTCCCAAGATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITHEATL*CPKISY
Trigger: ATAGCTAATCTTGGGACATCAGAGGGTCGCTTCATG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAAAACCACAACCTGCATaGAGCGACCCTCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLKPQPA*SDPLMS
Trigger: GGACATCAGAGGGTCGCTTCATGCAGGTTGTGGTTT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATGTGGACTGTTGCTTTaGCATAGTACTAGCACTATG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRCGLLL*HSTSTM
Trigger: CATAGTGCTAGTACTATGTCAAAGCAACAGTCCACA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGTTTTCAGGGGGAGTTaGAGATTCAGCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVVFRGS*RFSCCR
Trigger: CCTGCAACAGCTGAATCTGCAACTCCCCCTGAAAAC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAATGACTTCATTGAAATaGACAATCAGGCTACTGGGC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLMTSLK*TIRLLG
Trigger: GCCCAGTAGCCTGATTGTGCATTTCAATGAAGTCAT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTTGTTTCCAATTGCTTaGGAGGTGGGAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLFPIA*EVGTCH
Trigger: GTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGCTGCAGTCCTGACATaGGAAACAATCTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVAAVLT*ETIWVF
Trigger: GAACACCCAGATTGTTTCCCATGTCAGGACTGCAGC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAAGGGGTGCACTATTTaGGAAAACCTTGTAGATTGC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLKGCTI*ENLVDC
Trigger: GCAATCTACAAGGTTTTCCCAAATAGTGCACCCCTT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAAGTCCCAGCCACATATaGTCAGCCTTGTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSPSHI*SALSLL
Trigger: AAGGAGGGACAAGGCTGACCATATGTGGCTGGGACT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACAAACTCAGTTGAAATaGTTTGGGCTGGGGTATAAC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRQTQLK*FGLGYN
Trigger: GTTATACCCCAGCCCAAACCATTTCAACTGAGTTTG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATTGTGCTCCCACCACTaGCAAAGCAAAATAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLLCSHH*QSKIEN
Trigger: GTTTTCTATTTTGCTTTGCCAGTGGTGGGAGCACAA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318493.11
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTATTTCAGCAGGTCATTaGGGACCGTGCATAAAACGG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITISAGH*GPCIKR
Trigger: CCGTTTTATGCACGGTCCCCAATGACCTGCTGAAAT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCAGTTCAGAAAAGGATaGGCGCATTTCGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITQFRKG*AHFGFR
Trigger: CCTAAAGCCGAAATGCGCCCATCCTTTTCTGAACTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTGCTGGGTTAACCCTTaGCTTCAAGTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITCWVNP*LQVLMM
Trigger: CATCATCAGGACTTGAAGCCAAGGGTTAACCCAGCA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGTGAAGTTGGGAAGCTaGTACTTCATATTCACATTC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRVKLGS*YFIFTF
Trigger: GAATGTGAATATGAAGTATCAGCTTCCCAACTTCAC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTCTCGGGACACTAACTaGATTCAGGTTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITSRDTN*IQVFPN
Trigger: GTTGGGAAAAACCTGAATTCAGTTAGTGTCCCGAGA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACAGCAATCAATCCTGTaGAATTCTGATCTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRQQSIL*NSDLVE
Trigger: TTCAACCAGATCAGAATTTCACAGGATTGATTGCTG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGAGAGGACATTGGGATaGCTAAAATCTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRERTLG*LKSFMM
Trigger: CATCATGAAAGATTTTAGTCATCCCAATGTCCTCTC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTATCTGGCTTGCTTTGTaGGAACACCCCGAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITIWLAL*EHPEKN
Trigger: ATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGAT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAATATTTGATAGGGAATaGACACATGGCAGATCGATC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRIFDRE*THGRSI
Trigger: GATCGATCTGCCATGTGTGCATTCCCTATCAAATAT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACGAGAAACCACAACCTaGATGAAGCGACCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLRETTT*MKRPSD
Trigger: ATCAGAGGGTCGCTTCATGCAGGTTGTGGTTTCTCG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCTGTCAGAGGATACTaGACTTGTCGGCATGAACCG +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSVRGY*TCRHEP
Trigger: CGGTTCATGCCGACAAGTGCAGTATCCTCTGACAGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTACCCTCTTTGTAGCTTaGTGGGTTAACCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVTLFVA*WVNPWL
Trigger: AAGCCAAGGGTTAACCCAGCAAGCTACAAAGAGGGT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGTAGAATGACATTCTaGATGGGTGTTTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVCRMTF*MGVSAV
Trigger: CACCGCGGAAACACCCATCCAGAATGTCATTCTACA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTGGTTCGGCAGAATCTaGCTTGCTTTGTGCGAACAC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVWFGRI*LALCEH
Trigger: GTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACACTTCTGGAGACACTaGATGGGAGTCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLHFWRH*MGVQEK
Trigger: TTTCTCCTGGACTCCCATCCAGTGTCTCCAGAAGTG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACTCCACAATCACTTCTaGAGACACTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLLHNHF*RHWMGV
Trigger: GACTCCCATCCAGTGTCTCCAGAAGTGATTGTGGAG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGCACTGAGGTCAATGTaGACAGTATTTTGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRALRSM*TVFCSN
Trigger: ATTACTGCAAAATACTGTCCACATTGACCTCAGTGC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAACATGCTGCACTGCCTaGACCAGCTCTGGATTTAGA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLTCCTA*TSSGFR
Trigger: TCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTAGCCATCCACTTCACTaGCAGCTTTGCACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVSHPLH*QLCTCF
Trigger: AAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATGTTTTTCCACCAATTaGAATGTGTCTAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRCFSTN*NVSRIP
Trigger: GGGAATTCTAGACACATTTCAATTGGTGGAAAAACA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAACAGCAAACTCAGTTaGAATGGTTTGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVNSKLS*NGLGWG
Trigger: ACCCCAGCCCAAACCATTTCAACTGAGTTTGCTGTT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTTTTCCAAGGACGGTTaGAGAAATTGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITFSKDG*RNCLLP
Trigger: TGGAAGCAAGCAATTTCTTCAACCGTCCTTGGAAAA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTACAAGCCTATCCAAATaGGGAGTGTGTACTCTTGCA +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVTSLSK*GVCTLA
Trigger: TGCAAGAGTACACACTCCTCATTTGGATAGGCTTGT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTATGCCTTTGGCTACTTaGAGACCAAAGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITMPLAT*RPKPIR
Trigger: TCTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCAT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATTGAGTCCAGGAGTTTaGAACCAGCCTTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLLSPGV*NQPWQH
Trigger: ATGTTGCCAAGGCTGGTTTCAAACTCCTGGACTCAA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTCTGTGGGGAGAATATaGAGTGAACCTCCGACTGTA +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSVGRI*SEPPTV
Trigger: TACAGTCGGAGGTTCACTGCATATTCTCCCCACAGA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCTGTGGGGAGAATATaGAGTGAACCTCCGACTGTA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSVGRI*SEPPTV
Trigger: TACAGTCGGAGGTTCACTGCATATTCTCCCCACAGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAGGACTGGAAATGTCTaGAGCCCAAGCCATTCAATG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVRTGNV*SPSHSM
Trigger: CATTGAATGGCTTGGGCTGCAGACATTTCCAGTCCT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTGCAGATTCAGCTGTTaGAGGGAAGGAGTGGTACAA +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVCRFSC*REGVVQ
Trigger: TTGTACCACTCCTTCCCTGCAACAGCTGAATCTGCA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGGTCATTGGGGACCGTaGATAAAACGGCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLGHWGP*IKRLQN
Trigger: ATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATATACACAACCAAAATaGCCTCTTCCTATGACTTCA +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLYTQPK*PLPMTS
Trigger: TGAAGTCATAGGAAGAGGGCATTTTGGTTGTGTATA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAGCCCTCAATATTTCCTaGTTCAATTTCCCATATGAA +
Preference number: 4 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLALNIS*FNFPYE
Trigger: TTCATATGGGAAATTGAAGCAGGAAATATTGAGGGC...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGCCCTCAATATTTCCTaGTTCAATTTCCCATATGAA +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRALNIS*FNFPYE
Trigger: TTCATATGGGAAATTGAAGCAGGAAATATTGAGGGC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAACCCTCTTTGTAGCTTaGTGGGTTAACCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLTLFVA*WVNPWL
Trigger: AAGCCAAGGGTTAACCCAGCAAGCTACAAAGAGGGT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCACCTCCTGATAAATTaGCTTTGCTGCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVHLLIN*LCCCSP
Trigger: AGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTCTGGAGACACTGGATaGGAGTCCAGGAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSGDTG*ESRRKF
Trigger: GAATTTTCTCCTGGACTCCCATCCAGTGTCTCCAGA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCTGGAGACACTGGATaGGAGTCCAGGAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSGDTG*ESRRKF
Trigger: GAATTTTCTCCTGGACTCCCATCCAGTGTCTCCAGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAATTTCAGCAGGTCATTaGGGACCGTGCATAAAACGG +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLISAGH*GPCIKR
Trigger: CCGTTTTATGCACGGTCCCCAATGACCTGCTGAAAT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTAACCATTTCTGTAGTTaGGCTTACACTTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVNHFCS*AYTSGT
Trigger: AGTGCCCGAAGTGTAAGCCCAACTACAGAAATGGTT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTAGGAAACTGATCTTCTaGAAAAGTAGCTCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITRKLIF*KSSSVV
Trigger: GACTACCGAGCTACTTTTCCAGAAGATCAGTTTCCT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCTCTTTGTAGCTTGCTaGGTTAACCCTTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLFVAC*VNPWLQ
Trigger: TTGAAGCCAAGGGTTAACCCAGCAAGCTACAAAGAG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAGGAGAAAATTCACATaGGGGGTTGATGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVRRKFT*GVDGPD
Trigger: ATCAGGACCATCAACCCCTCATGTGAATTTTCTCCT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACTGGATTTAGAGCACTaGGGTCAATGTGGACAGTAT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLLDLEH*GQCGQY
Trigger: ATACTGTCCACATTGACCTCAGTGCTCTAAATCCAG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCTGGATTTAGAGCACTaGGGTCAATGTGGACAGTAT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVLDLEH*GQCGQY
Trigger: ATACTGTCCACATTGACCTCAGTGCTCTAAATCCAG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCTTCTCCTATGTCAGTaGTTCTGTTCAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITLLLCQ*FCSRIS
Trigger: TGAAATCCTTGAACAGAATCACTGACATAGGAGAAG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAATAAATTGGCTTTGCTaGTGCAGTCCTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLINWLC*CSPDMG
Trigger: TCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTAT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCATAAATTGGCTTTGCTaGTGCAGTCCTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVINWLC*CSPDMG
Trigger: TCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTAT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGAAAACCTTGTAGATTaGAGGCAGACAGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVENLVD*RQTDLL
Trigger: CAACAGATCTGTCTGCCTGCAATCTACAAGGTTTTC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTTCCTTCCTGCTTCATaGACATTTATGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITFLPAS*TFMTIL
Trigger: GAGAATGGTCATAAATGTGCATGAAGCAGGAAGGAA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATGTGGACAAACTTTTTaGTTGCAAGATATTTCATGC +
Preference number: 4 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRCGQTF*LQDISC
Trigger: GCATGAAATATCTTGCAAGCAAAAAGTTTGTCCACA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAGCATCACAAAGTTCTaGTCAGGGTGGCTATTCCAT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSITKF*SGWLFH
Trigger: ATGGAATAGCCACCCTGAGCAGAACTTTGTGATGCT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGCCCAAGCCATTCAATaGGATCTTCGTGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLAQAIQ*DLRDLL
Trigger: AAGAAGATCACGAAGATCCCATTGAATGGCTTGGGC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTTTGCAGTAATGGACTaGATATATCAGAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVFAVMD*IYQSPH
Trigger: GTGGGGACTCTGATATATCCAGTCCATTACTGCAAA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAAAGTTCTGCTCAGGGTaGCTATTCCATCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLKFCSG*LFHLGE
Trigger: TTCACCTAGATGGAATAGCCACCCTGAGCAGAACTT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR CAA 72 bp TGTTCTCAAGAATGTATATACAAGTGTGTAGTCCTGTaGATGGGATGTTTCCCCGAGTTCTTTCTATTGATG +
Preference number: 4 (lower is better)
Translates to: CSQECIYKCVVL*MGCFPEFFLLM
Trigger: CATCAATAGAAAGAACTCGGGGAAACATCCCATCAACAGGACTACACACTTGTATATACATTCTTGAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTACTCAGCAACCTTCTaGAGGTCTTCCTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVYSATF*RSSSFK
Trigger: TTTAAATGAGGAAGACCTTCAGAAGGTTGCTGAGTA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGAATTAGAGCGATGTTaGCATGCCACTGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLELERC*HATVKF
Trigger: GAACTTTACAGTGGCATGTCAACATCGCTCTAATTC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGAATTAGAGCGATGTTaGCATGCCACTGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVELERC*HATVKF
Trigger: GAACTTTACAGTGGCATGTCAACATCGCTCTAATTC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTATTTTCATTGCCCATTaGGATCATCACTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVIFIAH*DHHWLF
Trigger: GAAAAGCCAGTGATGATCTCAATGGGCAATGAAAAT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTGTCTACAGATTCATTTaGAACCATTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITVYRFI*NHFCSW
Trigger: CCAACTACAGAAATGGTTTCAAATGAATCTGTAGAC...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAAAGGACCACACATCTaGCTTGGTGGTAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVKGPHI*LGGKLL
Trigger: CAAAAGTTTACCACCAAGTCAGATGTGTGGTCCTTT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTGTGTGATGCTATTTTaGAACTTTGACTGTATTGCC +
Preference number: 4 (lower is better)
Translates to: SSAAGIGSDKYLILRRITCVMLF*NFDCIA
Trigger: GGCAATACAGTCAAAGTTTCAAAATAGCATCACACA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCTACCTATGAGCTGTaGTTGGAACCAATGAACCTT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSTYEL*LEPMNL
Trigger: AAGGTTCATTGGTTCCAATCACAGCTCATAGGTAGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGAAAACCTTGTAGATTaGAGGCAGACAGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVENLVD*RQTDLL
Trigger: CAACAGATCTGTCTGCCTGCAATCTACAAGGTTTTC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTGGCAGGACCAACTGTaGATTTCAATGTATTCATCG +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVWQDQL*ISMYSS
Trigger: CGATGAATACATTGAAATGCACAGTTGGTCCTGCCA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCATGACTTCATTGAAATaGACAATCAGGCTACTGGGC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVMTSLK*TIRLLG
Trigger: GCCCAGTAGCCTGATTGTGCATTTCAATGAAGTCAT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCTTCTGGTAAGTCTCTaGACTATCAGAGAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLLVSL*TIRELL
Trigger: TAAAAGCTCTCTGATAGTGCAGAGACTTACCAGAAG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATTTGCAGTAATGGACTaGATATATCAGAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLFAVMD*IYQSPH
Trigger: GTGGGGACTCTGATATATCCAGTCCATTACTGCAAA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
3UTR CAA 72 bp AATATTTGGATTGTAATAGCTCTTCAGTACAATTCCTaGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NIWIVIALQYNS*CLLVSLCTIRE
Trigger: CTCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCTATTACAATCCAAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGTCCCGTGGCCATTTaGAATAATTATGGACATATT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVCPVAI*NNYGHI
Trigger: AATATGTCCATAATTATTTCAAATGGCCACGGGACA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGTTTTTCCACCAATTaGAATGTGTCTAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVCFSTN*NVSRIP
Trigger: GGGAATTCTAGACACATTTCAATTGGTGGAAAAACA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCCAACAAAGTCCCATaGTATACACAACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSNKVP*YTQPKC
Trigger: GCATTTTGGTTGTGTATATCATGGGACTTTGTTGGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCTTCAATTTCCCATATaGAATCAAGTGGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLQFPI*NQVVPD
Trigger: ATCAGGTACCACTTGATTTCATATGGGAAATTGAAG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGCTATTCCATCTAGGTaGAATAGCTGGGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVAIPSR*NSWDFQ
Trigger: TTGAAAATCCCAGCTATTTCACCTAGATGGAATAGC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTTCCTTCCTGCTTCATaGACATTTATGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVFLPAS*TFMTIL
Trigger: GAGAATGGTCATAAATGTGCATGAAGCAGGAAGGAA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCACTTCACCTTTAACTaGTTCAGGGTCAATATCATT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVHFTFN*FRVNII
Trigger: AATGATATTGACCCTGAAGCAGTTAAAGGTGAAGTG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTTGCAAGATATTTCATaGCTTTGGCTACTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLQDIS*LWLLED
Trigger: GTCTTCAAGTAGCCAAAGGCATGAAATATCTTGCAA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGCTTGTCTCTCGGTTaGCTAAGTCAATTTTCAATT +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVCLSLG*LSQFSI
Trigger: AATTGAAAATTGACTTAGCCAACCGAGAGACAAGCA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAACAACAGATTATCTCTaGATTAGAGCGATGTTGACA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLTTDYL*IRAMLT
Trigger: TGTCAACATCGCTCTAATTCAGAGATAATCTGTTGT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGTCTACAGATTCATTTaGAACCATTTCTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLVYRFI*NHFCSW
Trigger: CCAACTACAGAAATGGTTTCAAATGAATCTGTAGAC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR TCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGAGTCTCATTTCGAATaGAATTTCGAAGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVESHFE*NFEDLH
Trigger: ATGGAGATCTTCGAAATTTCATTCGAAATGAGACTC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCATGGACATATTGAAATaGTTATTCATGGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVMDILK*LFMAGP
Trigger: TGGTCCTGCCATGAATAAGCATTTCAATATGTCCAT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAATGGACATATTGAAATaGTTATTCATGGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLMDILK*LFMAGP
Trigger: TGGTCCTGCCATGAATAAGCATTTCAATATGTCCAT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTGTTGAAGAAATTGCTTaGTTCCACTCTATATTTAGC +
Preference number: 4 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVVEEIA*FHSIFS
Trigger: GCTAAATATAGAGTGGAAGCAAGCAATTTCTTCAAC...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CCA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATGCTTGTCTCTCGGTTaGCTAAGTCAATTTTCAATT +
Preference number: 4 (lower is better)
Translates to: KSYNSAILARAKNIDGLLCLSLG*LSQFSI
Trigger: AATTGAAAATTGACTTAGCCAACCGAGAGACAAGCA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR GCA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGTTGAAGAAATTGCTTaGTTCCACTCTATATTTAGC +
Preference number: 4 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVVEEIA*FHSIFS
Trigger: GCTAAATATAGAGTGGAAGCAAGCAATTTCTTCAAC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp CTGTCGCCCCGCATCTGGCTCGCGCCCTCCACTCGGCTCCGCATCTaGTCACAAAGCGCTCGGGGCGCCGCGGGCGGCGAGGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LSPRIWLAPSTRLRI*SQSARGAAGGEGLR
Trigger: CCGGAGGCCCTCGCCGCCCGCGGCGCCCCGAGCGCTTTGTGAGCAGATGCGGAGCCGAGTGGAGGGCGCGAGCCAGATGCGGGGCGACAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000456159.1
CDS CCA 90 bp GCGCCTCCCCGCCTCCTCTCAGCAAGTCAGCTGTCGCCCCGCATCTaGCTCGCGCCCTCCACTCGGCTCCGCATCTGCTCACAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: APPRLLSASQLSPRI*LAPSTRLRICSQSA
Trigger: AGCGCTTTGTGAGCAGATGCGGAGCCGAGTGGAGGGCGCGAGCCAGATGCGGGGCGACAGCTGACTTGCTGAGAGGAGGCGGGGAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000456159.1
CDS CCA 90 bp TTTGATTTACTCTTCATCACCACCCTTTCGGTGCCCAGGAACCAGTaGAGAAGTCAGCGGCGCAAGGACCACACGCGCGCTCCGCGCCTC +
Preference number: 5 (lower is better)
Translates to: FDLLFITTLSVPRNQ*RSQRRKDHTRAPRL
Trigger: GAGGCGCGGAGCGCGCGTGTGGTCCTTGCGCCGCTGACTTCTCCACTGGTTCCTGGGCACCGAAAGGGTGGTGATGAAGAGTAAATCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCACGGCTGCAGGCCATaGGTCCGTGGCCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPHGCRP*VRGLWD
Trigger: GTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CCA 90 bp GGACTTTGGCTCCCAGGGCGCTCACCACACAGTCAGGACACTGGCTaGGCTCTTCTATCTGTGGGGAGAATATGCAGTGAACCTCCGACT +
Preference number: 5 (lower is better)
Translates to: GLWLPGRSPHSQDTG*ALLSVGRICSEPPT
Trigger: AGTCGGAGGTTCACTGCATATTCTCCCCACAGATAGAAGAGCCCAGCCAGTGTCCTGACTGTGTGGTGAGCGCCCTGGGAGCCAAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGGGTTTTCAGGGGGAGTaGCAGATTCAGCTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGGFQGE*QIQLLQ
Trigger: CTGCAACAGCTGAATCTGCAACTCCCCCTGAAAACC...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp GGCACCAGCCACACTGAACAAAGGGTGGGGCAGAGAGGCATTGACTaGAGGACTGGAAATGTCTGCAGCCCAAGCCATTCAATGGGATCT +
Preference number: 5 (lower is better)
Translates to: GTSHTEQRVGQRGID*RTGNVCSPSHSMGS
Trigger: AGATCCCATTGAATGGCTTGGGCTGCAGACATTTCCAGTCCTGCAGTCAATGCCTCTCTGCCCCACCCTTTGTTCAGTGTGGCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTCGGCAGAATCTGGCTaGCTTTGTGCGAACACCCCG +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPSAESG*LCANTP
Trigger: CGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGGGCAGAGAGGCATaGACTGCAGGACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPWGREA*TAGLEM
Trigger: CATTTCCAGTCCTGCAGTCAATGCCTCTCTGCCCCA...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAGGCAGACAGATCTGTaGAGTCCATGTCCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPRQTDL*SPCPAQ
Trigger: CTGAGCGGGACATGGACTCAACAGATCTGTCTGCCT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp ATTGCTCCTCTGCACCAAGGTAAACAGGAGCACGAGGATGCCAGGTaGAAGCACAGCGGGGGCCTTCATTATGAGAGGTTTATCTTTCGG +
Preference number: 5 (lower is better)
Translates to: IAPLHQGKQEHEDAR*KHSGGLHYERFIFR
Trigger: CCGAAAGATAAACCTCTCATAATGAAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTGCTCCTGTTTACCTTGGTGCAGAGGAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp ATCTCGGACTTTGCTAGTGCCTCTTTACACTCCCCATTGCTCCTCTaGACCAAGGTAAACAGGAGCACGAGGATGCCAGGTGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: ISDFASASLHSPLLL*TKVNRSTRMPGAST
Trigger: TGTGCTTGCACCTGGCATCCTCGTGCTCCTGTTTACCTTGGTGCAGAGGAGCAATGGGGAGTGTAAAGAGGCACTAGCAAAGTCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCATTCATCTCGGACTTaGCTAGTGCCTCTTTACACT +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGHSSRT*LVPLYT
Trigger: AGTGTAAAGAGGCACTAGCAAAGTCCGAGATGAATG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTGGCAGGTCCCTCTGTaGACGCTGCCACAGCTAATG +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEWQVPL*TLPQLM
Trigger: CATTAGCTGTGGCAGCGTCAACAGAGGGACCTGCCA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTCGGCAGAATCTGGCTaGCTTTGTGCGAACACCCCG +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETESAESG*LCANTP
Trigger: CGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAATTCACATGAGGGGTaGATGGTCCTGATCGAGAAA +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGNSHEG*MVLIEK
Trigger: TTTCTCGATCAGGACCATCAACCCCTCATGTGAATT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGGGTTTTCAGGGGGAGTaGCAGATTCAGCTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPGFQGE*QIQLLQ
Trigger: CTGCAACAGCTGAATCTGCAACTCCCCCTGAAAACC...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCATGCCTTTGGCTACTaGAAGACCAAAGCCAATAAG +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGHAFGY*KTKANK
Trigger: CTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCATG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAAGTTTTGTTTCCAATaGCTTGCGAGGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGKFCFQ*LARWEP
Trigger: AGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp ATTCTGCTAAACTCTTTGATTTACTCTTCATCACCACCCTTTCGGTaGCCAGGAACCAGTGGAGAAGTCAGCGGCGCAAGGACCACACGC +
Preference number: 5 (lower is better)
Translates to: ILLNSLIYSSSPPFR*PGTSGEVSGARTTR
Trigger: GCGTGTGGTCCTTGCGCCGCTGACTTCTCCACTGGTTCCTGGGCACCGAAAGGGTGGTGATGAAGAGTAAATCAAAGAGTTTAGCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS GCA 90 bp ATTGCTCCTCTGCACCAAGGTAAACAGGAGCACGAGGATGCCAGGTaGAAGCACAGCGGGGGCCTTCATTATGAGAGGTTTATCATATGG +
Preference number: 5 (lower is better)
Translates to: IAPLHQGKQEHEDAR*KHSGGLHYERFIIW
Trigger: CCATATGATAAACCTCTCATAATGAAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTGCTCCTGTTTACCTTGGTGCAGAGGAGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS CCA 90 bp TGCACAATCAGGCTACTGGGCCCAATCACTACATGCTGCACTGCCTaGACCAGCTCTGGATTTAGAGCACTGAGGTCAATGTGGACAGTA +
Preference number: 5 (lower is better)
Translates to: CTIRLLGPITTCCTA*TSSGFRALRSMWTV
Trigger: TACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGACAGTGCTGTTGATATaGAGACAACACCAGCAATCA +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGTVLLI*RQHQQS
Trigger: TGATTGCTGGTGTTGTCTCAATATCAACAGCACTGT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGAGCCAAACTCAACTATaGAGTTTCAGTGTGACACAC +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGSQTQL*SFSVTH
Trigger: GTGTGTCACACTGAAACTCAATAGTTGAGTTTGGCT...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTGGCAGATCGATCCATaGGTTCGGCAGAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEWQIDP*VRQNLA
Trigger: AGCCAGATTCTGCCGAACCAATGGATCGATCTGCCA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCCAAAATCAGCAACCTaGACTGTGAATTTTTCATCC +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGPKSAT*TVNFSS
Trigger: GGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp TCTTTCCAAACACCTCCTGATAAATTGGCTTTGCTGCTGCAGTCCTaGCATGGGAAACAATCTGGGTGTTCCAGCACAGGCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SFQTPPDKLALLLQS*HGKQSGCSSTGPVL
Trigger: CAAGACTGGGCCTGTGCTGGAACACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTGTTTGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS TCA 90 bp GTTCACATGGACATAGTGCTCCCCAATGAAAGTAGAGAAGATCGCTaGTATCCGGGACACCAGTTCAGAAAAGGATGGGCGCATTTCGGC +
Preference number: 5 (lower is better)
Translates to: VHMDIVLPNESREDR*YPGHQFRKGWAHFG
Trigger: GCCGAAATGCGCCCATCCTTTTCTGAACTGGTGTCCCGGATATCAGCGATCTTCTCTACTTTCATTGGGGAGCACTATGTCCATGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp ATGCACACATGGCAGATCGATCCATTGGTTCGGCAGAATCTGGCTTaGTTTGTGCGAACACCCCGAAAAGAATGTCATCATTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: MHTWQIDPLVRQNLA*FVRTPRKECHHSGW
Trigger: CCAGCCTGAATGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 90 bp TCATTGAAATGCACAATCAGGCTACTGGGCCCAATCACTACATGCTaGACTGCCTGGACCAGCTCTGGATTTAGAGCACTGAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: SLKCTIRLLGPITTC*TAWTSSGFRALRSM
Trigger: CATTGACCTCAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp ACTTCATTGAAATGCACAATCAGGCTACTGGGCCCAATCACTACATaGTGCACTGCCTGGACCAGCTCTGGATTTAGAGCACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSLKCTIRLLGPITT*CTAWTSSGFRALRS
Trigger: TGACCTCAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTTCAATGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGTTGTTGACGATCTTGTaGAAGAAGTCGTTGACATAT +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGLLTIL*KKSLTY
Trigger: ATATGTCAACGACTTCTTCAACAAGATCGTCAACAA...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGTGGCCTGTGGGCATCTCACATTGTTTTaGTTGACGATCTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QYDRSVVTAAGHWSVACGHLTLF*LTILLK
Trigger: CTTCAACAAGATCGTCAACAAAAACAATGTGAGATG...CCCACAGGCCACGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAATTCACATGAGGGGTaGATGGTCCTGATCGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPNSHEG*MVLIEK
Trigger: TTTCTCGATCAGGACCATCAACCCCTCATGTGAATT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAATATGACAGGAGTGTaGTCACGGCTGCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETENMTGV*SRLQAI
Trigger: AATGGCCTGCAGCCGTGACAACACTCCTGTCATATT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGTTTGTTTCCAATTGCTaGCGAGGTGGGAACCTGCCA +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEFVSNC*RGGNLP
Trigger: TGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAA...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp TATGGTATTGCCTACAAAGAAGTTGATGAACCGGTCCTTTACAGATaGAAGGACTTTGGCTCCCAGGGCGCTCACCACACAGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: YGIAYKEVDEPVLYR*KDFGSQGAHHTVRT
Trigger: TGTCCTGACTGTGTGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGGTTCATCAACTTCTTTGTAGGCAATACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS TCA 90 bp GGAGCACGAGGATGCCAGGTGCAAGCACAGCGGGGGCCTTCATTATaGGAGGTTTATCATATGGGAAGCATTCTGCTAAACTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: GARGCQVQAQRGPSL*EVYHMGSILLNSLI
Trigger: AATCAAAGAGTTTAGCAGAATGCTTCCCATATGATAAACCTCTCATAATGAAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS CCA 90 bp AGGGAATGCACACATGGCAGATCGATCCATTGGTTCGGCAGAATCTaGCTTGCTTTGTGCGAACACCCCGAAAAGAATGTCATCATTCAG +
Preference number: 5 (lower is better)
Translates to: RECTHGRSIHWFGRI*LALCEHPEKNVIIQ
Trigger: CTGAATGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAACAGATGAAAGGACTTaGGCTCCCAGGGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRTDERT*APRALT
Trigger: GGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGATGTACTGTATTGTGTaGTCCCGTGGCCATTTGAAA +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPMYCIV*SRGHLK
Trigger: TTTCAAATGGCCACGGGACAACACAATACAGTACAT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACACGGCTGCAGGCCATaGGTCCGTGGCCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLHGCRP*VRGLWD
Trigger: GTCCCACAGGCCACGGACCAATGGCCTGCAGCCGTG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGAACTCCCCAAAAGTTTaGTTTCCAATTGCTTGCGAG +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPNSPKV*FPIACE
Trigger: CTCGCAAGCAATTGGAAACAAAACTTTTGGGGAGTT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp CCTTCACTTCGCAGGCAGATTCCCAGGAGCGAGAGGACATTGGGATaGCTAAAATCTTTCATGATGATTCCCTCGGTCAGAAATTGGGAA +
Preference number: 5 (lower is better)
Translates to: PSLRRQIPRSERTLG*LKSFMMIPSVRNWE
Trigger: TTCCCAATTTCTGACCGAGGGAATCATCATGAAAGATTTTAGTCATCCCAATGTCCTCTCGCTCCTGGGAATCTGCCTGCGAAGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp ATTGGACAAAGTGTGGACTGTTGCTTTGACATAGTACTAGCACTATaGTGTCTCCCAGAAGGAGGCTGGTCGTGTGTCCACCTCATCATC +
Preference number: 5 (lower is better)
Translates to: IGQSVDCCFDIVLAL*CLPEGGWSCVHLII
Trigger: GATGATGAGGTGGACACACGACCAGCCTCCTTCTGGGAGACATCATAGTGCTAGTACTATGTCAAAGCAACAGTCCACACTTTGTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CCA 90 bp GTTGACATATTTGATAGGGAATGCACACATGGCAGATCGATCCATTaGTTCGGCAGAATCTGGCTTGCTTTGTGCGAACACCCCGAAAAG +
Preference number: 5 (lower is better)
Translates to: VDIFDRECTHGRSIH*FGRIWLALCEHPEK
Trigger: CTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CCA 90 bp CAACAAGTAAACAGTTATATCAAAGGTGTTTACGTCAGGATAAGGTaGGGCTCCTCTTGTCATCAGCTCCCAGAGGAGCACGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: QQVNSYIKGVYVRIR*GSSCHQLPEEHAKG
Trigger: TCCTTTGGCGTGCTCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTTATCCTGACGTAAACACCTTTGATATAACTGTTTACTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGCCACAGCTAATGAGTaGATCATCATAGTAGGTGTC +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEATANE*IIIVGV
Trigger: GACACCTACTATGATGATCAACTCATTAGCTGTGGC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCAGGCTGGCTCCTATTaGTCTAGCAAGCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITQAGSY*SSKLGP
Trigger: GGGGCCCAGCTTGCTAGACAAATAGGAGCCAGCCTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAGGCAGACAGATCTGTaGAGTCCATGTCCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLRQTDL*SPCPAQ
Trigger: CTGAGCGGGACATGGACTCAACAGATCTGTCTGCCT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGGAAAACCTTGTAGATaGCAGGCAGACAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEGKPCR*QADRSV
Trigger: AACAGATCTGTCTGCCTGCAATCTACAAGGTTTTCC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGGAAAACCTTGTAGATaGCAGGCAGACAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLGKPCR*QADRSV
Trigger: AACAGATCTGTCTGCCTGCAATCTACAAGGTTTTCC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTCAAGGGGTGCACTATTaGGGAAAACCTTGTAGATTG +
Preference number: 5 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLQGVHY*GKPCRL
Trigger: CAATCTACAAGGTTTTCCCAAATAGTGCACCCCTTG...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTACACATATGGTCAGCCTaGTCCCTCCTTCAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLHIWSA*SLLQGV
Trigger: CACCCCTTGAAGGAGGGACAAGGCTGACCATATGTG...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGATGCTTGTCTCTCGGTaGGCTAAGTCAATTTTCAAT +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPMLVSR*AKSIFN
Trigger: ATTGAAAATTGACTTAGCCAACCGAGAGACAAGCAT...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GTTTTGGACTCCAATATGACAGGAGTGTTGTCACGGCTGCAGGCCATTGGTCCGCATTTTCATTGCCCATaGAGATCATCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VLDSNMTGVLSRLQAIGPHFHCP*RSSLAF
Trigger: AAAAGCCAGTGATGATCTCAATGGGCAATGAAAATG...CGGACCAATGGCCTGCAGCCGTGACAACACTCCTGTCATATTGGAGTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAAGTTTTGTTTCCAATaGCTTGCGAGGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEKFCFQ*LARWEP
Trigger: AGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTTGCCTACAAAGAAGTaGATGAACCGGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLLPTKK*MNRSFT
Trigger: TGTAAAGGACCGGTTCATCAACTTCTTTGTAGGCAA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTCAGGCTGGCTCCTATTaGTCTAGCAAGCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVQAGSY*SSKLGP
Trigger: GGGGCCCAGCTTGCTAGACAAATAGGAGCCAGCCTG...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTATGGCAGATCGATCCATaGGTTCGGCAGAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLWQIDP*VRQNLA
Trigger: AGCCAGATTCTGCCGAACCAATGGATCGATCTGCCA...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGGACGGTTGAAGAAATaGCTTGCTTCCACTCTATAT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEGRLKK*LASTLY
Trigger: ATATAGAGTGGAAGCAAGCAATTTCTTCAACCGTCC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTAAGGTGGGGCTCCTCTaGTCATCAGCTCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITKVGLL*SSAPRG
Trigger: TCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp CCTTCCTGCTTCATGCACATTTATGACCATTCTCGGGACACTAACTaGATTCAGGTTTTTCCCAACACCTGTTATTGTGCTCCCACCACT +
Preference number: 5 (lower is better)
Translates to: PSCFMHIYDHSRDTN*IQVFPNTCYCAPTT
Trigger: AGTGGTGGGAGCACAATAACAGGTGTTGGGAAAAACCTGAATTCAGTTAGTGTCCCGAGAATGGTCATAAATGTGCATGAAGCAGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
CDS TCA 90 bp TCACTACATGCTGCACTGCCTGGACCAGCTCTGGATTTAGAGCACTaGGGTCAATGTGGACAGTATTTTGCAGTAATGGACTGGATATAT +
Preference number: 5 (lower is better)
Translates to: SLHAALPGPALDLEH*GQCGQYFAVMDWIY
Trigger: ATATATCCAGTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAGAATCTGGCTTGCTTaGTGCGAACACCCCGAAAAG +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRRIWLA*CEHPEK
Trigger: CTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGAAGTCGTTGACATATTaGATAGGGAATGCACACATG +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEKSLTY*IGNAHM
Trigger: CATGTGTGCATTCCCTATCAAATATGTCAACGACTT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTTGGAGACATCTCACATaGTTTTTGTTGACGATCTTG +
Preference number: 5 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLWRHLT*FLLTIL
Trigger: CAAGATCGTCAACAAAAACAATGTGAGATGTCTCCA...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGGGTAAACTTTTGAGTTaGCAGACTTTCCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETEGKLLS*QTFQSH
Trigger: ATGGCTTTGGAAAGTCTGCAAACTCAAAAGTTTACC...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAATATGACAGGAGTGTaGTCACGGCTGCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLNMTGV*SRLQAI
Trigger: AATGGCCTGCAGCCGTGACAACACTCCTGTCATATT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATTTGTTTCCAATTGCTaGCGAGGTGGGAACCTGCCA +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRFVSNC*RGGNLP
Trigger: TGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGATGCGTTCATGCTCTaGACCCTGGTAGAGACAGTT +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRDAFML*TLVETV
Trigger: AACTGTCTCTACCAGGGTCAAGAGCATGAACGCATC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS GCA 90 bp GTTGACGATCTTGTTGAAGAAGTCGTTGACATATTTGATAGGGAATaGACACATGGCAGATCGATCCATTGGTTCGGCAGAATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: VDDLVEEVVDIFDRE*THGRSIHWFGRIWL
Trigger: AAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 90 bp ACCAGCTCTGGATTTAGAGCACTGAGGTCAATGTGGACAGTATTTTaGAGTAATGGACTGGATATATCAGAGTCCCCACTAGTTAGGATG +
Preference number: 5 (lower is better)
Translates to: TSSGFRALRSMWTVF*SNGLDISESPLVRM
Trigger: CATCCTAACTAGTGGGGACTCTGATATATCCAGTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS-3UTR CAA 90 bp CAAAAGTTTTGTTTCCAATTGCTTGCGAGGTGGGAACCTGCCACCGAGACAGAGACAACTAGAGCCATGTaGATGTTATCTTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: QKFCFQLLARWEPATETETTRAM*MLSFQT
Trigger: TGTTTGGAAAGATAACATCAACATGGCTCTAGTTGT...CTCTGTCTCGGTGGCAGGTTCCCACCTCGCAAGCAATTGGAAACAAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATGGCAGGTCCCTCTGTaGACGCTGCCACAGCTAATG +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLWQVPL*TLPQLM
Trigger: CATTAGCTGTGGCAGCGTCAACAGAGGGACCTGCCA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAACAGATGAAAGGACTTaGGCTCCCAGGGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLTDERT*APRALT
Trigger: GGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTGGGGCAGAGAGGCATaGACTGCAGGACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVWGREA*TAGLEM
Trigger: CATTTCCAGTCCTGCAGTCAATGCCTCTCTGCCCCA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATCCGATCGCACACATTaGTCGTGGCACCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLSDRTH*SWHQPH
Trigger: GTGTGGCTGGTGCCACGACAAATGTGTGCGATCGGA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTCCCAACACCTGTTATaGTGCTCCCACCACTGGCAA +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITSQHLL*CSHHWQ
Trigger: TTGCCAGTGGTGGGAGCACAATAACAGGTGTTGGGA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318493.11
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAATTTCAGCAGGTCATaGGGGACCGTGCATAAAACG +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLNFSRS*GTVHKT
Trigger: CGTTTTATGCACGGTCCCCAATGACCTGCTGAAATT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAAATTTCAGCAGGTCATaGGGGACCGTGCATAAAACG +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRNFSRS*GTVHKT
Trigger: CGTTTTATGCACGGTCCCCAATGACCTGCTGAAATT...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATCCCTCGGTCAGAAATaGGGAAACTTCTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRSLGQK*GNFSYV
Trigger: GACATAGGAGAAGTTTCCCAATTTCTGACCGAGGGA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp GGGAACCTGCCACCGAGACAGAGGCTAATCTTTTCAATCCATCCACCCTTTCTTGGACAAACTTTTTGCTaGCAAGATATTTCATGCCTT +
Preference number: 5 (lower is better)
Translates to: GNLPPRQRLIFSIHPPFLGQTFC*QDISCL
Trigger: AAGGCATGAAATATCTTGCAAGCAAAAAGTTTGTCC...AAGAAAGGGTGGATGGATTGAAAAGATTAGCCTCTGTCTCGGTGGCAGGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAAGGTGGGGCTCCTCTaGTCATCAGCTCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVKVGLL*SSAPRG
Trigger: TCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CCA 90 bp AATCAAATTTATTATTCCTCCGAAATCCAAAGTCCCAGCCACATATaGTCAGCCTTGTCCCTCCTTCAAGGGGTGCACTATTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: NQIYYSSEIQSPSHI*SALSLLQGVHYLGK
Trigger: TTTTCCCAAATAGTGCACCCCTTGAAGGAGGGACAAGGCTGACCATATGTGGCTGGGACTTTGGATTTCGGAGGAATAATAAATTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCACATATGGTCAGCCTaGTCCCTCCTTCAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVHIWSA*SLLQGV
Trigger: CACCCCTTGAAGGAGGGACAAGGCTGACCATATGTG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp CCTTTAATGAAGGTGGATATAGATGTTAAGAGGACTTCGCTGAATTaGCCCATGAATAAGTCAACGCGCTGCAAAGCTGTGGTAAACTCT +
Preference number: 5 (lower is better)
Translates to: PLMKVDIDVKRTSLN*PMNKSTRCKAVVNS
Trigger: AGAGTTTACCACAGCTTTGCAGCGCGTTGACTTATTCATGGGTCAATTCAGCGAAGTCCTCTTAACATCTATATCCACCTTCATTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS GCA 90 bp CTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATTGGGGACCGTaGATAAAACGGCTTCAGAATGTAAGTGTATATTCTCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: LYLARCSISAGHWGP*IKRLQNVSVYSHSS
Trigger: AGAGCTGTGAGAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
ENST00000454623.1
CDS CCA 90 bp GCTTCCACTCTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATTaGGGACCGTGCATAAAACGGCTTCAGAATGTAAGTGTATATTCT +
Preference number: 5 (lower is better)
Translates to: ASTLYLARCSISAGH*GPCIKRLQNVSVYS
Trigger: AGAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAGAGTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS CCA 90 bp ATCCCACCTCTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATTaGGGACCGTGCATAAAACGGCTTCAGAATGTAAGTGTATATTCT +
Preference number: 5 (lower is better)
Translates to: IPPLYLARCSISAGH*GPCIKRLQNVSVYS
Trigger: AGAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAGAGGTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422097.1
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAATGTACTGTATTGTGTaGTCCCGTGGCCATTTGAAA +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLMYCIV*SRGHLK
Trigger: TTTCAAATGGCCACGGGACAACACAATACAGTACAT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTGGAGAATGTACTGTATaGTGTTGTCCCGTGGCCATT +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITGECTV*CCPVAI
Trigger: AATGGCCACGGGACAACACAATACAGTACATTCTCC...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACCCAGAATTCAAGTTTaGGACTCCAATATGACAGGA +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRPRIQV*DSNMTG
Trigger: TCCTGTCATATTGGAGTCCAAAACTTGAATTCTGGG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAAGAATCTGGCTTGCTTaGTGCGAACACCCCGAAAAG +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLRIWLA*CEHPEK
Trigger: CTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAATGCTTGTCTCTCGGTaGGCTAAGTCAATTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLMLVSR*AKSIFN
Trigger: ATTGAAAATTGACTTAGCCAACCGAGAGACAAGCAT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACATTTTCATTGCCCATaGAGATCATCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRHFHCP*RSSLAF
Trigger: AAAAGCCAGTGATGATCTCAATGGGCAATGAAAATG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTACTTCACTGGCAGCTTaGCACCTGTTTTGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITTSLAA*HLFCCV
Trigger: TACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGGTAAACTTTTGAGTTaGCAGACTTTCCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRGKLLS*QTFQSH
Trigger: ATGGCTTTGGAAAGTCTGCAAACTCAAAAGTTTACC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGACTTGGTGGTAAACTTTaGAGTTTGCAGACTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRLGGKL*SLQTFQ
Trigger: TTGGAAAGTCTGCAAACTCAAAAGTTTACCACCAAG...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGATGCGTTCATGCTCTaGACCCTGGTAGAGACAGTT +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVDAFML*TLVETV
Trigger: AACTGTCTCTACCAGGGTCAAGAGCATGAACGCATC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp AAGCCTGAGAATAACATAATTACACTGGCTTCCTTATTTACATCATaGGAGGAATGCAGGAATCCCACCTCTATATTTAGCTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KPENNIITLASLFTS*EECRNPTSIFSSLF
Trigger: GAACAGCGAGCTAAATATAGAGGTGGGATTCCTGCATTCCTCTCATGATGTAAATAAGGAAGCCAGTGTAATTATGTTATTCTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422097.1
CDS CCA 90 bp GGTAAACTTTTGAGTTTGCAGACTTTCCAAAGCCATCCACTTCACTaGCAGCTTTGCACCTGTTTTGTTGTGTACACTATAGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: GKLLSLQTFQSHPLH*QLCTCFVVYTIVFF
Trigger: AAAGAATACTATAGTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGCAAACTCAAAAGTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGATTTTTGTTGACGATCTaGTTGAAGAAGTCGTTGACA +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRFLLTI*LKKSLT
Trigger: TGTCAACGACTTCTTCAACAAGATCGTCAACAAAAA...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAATTTCGGCGAAATACTaGTTATTACAGGATCCACAT +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLISAKY*LLQDPH
Trigger: ATGTGGATCCTGTAATAACAAGTATTTCGCCGAAAT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTCCCTCGGTCAGAAATaGGGAAACTTCTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVSLGQK*GNFSYV
Trigger: GACATAGGAGAAGTTTCCCAATTTCTGACCGAGGGA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGCTCTTCAGTACAATTCCTTGTGTCTTCTGGTAAGTCTCTGCACTATCAGAGAGGACAAACTTTTTGCTaGCAAGATATTTCATGCCTT +
Preference number: 5 (lower is better)
Translates to: SSSVQFLVSSGKSLHYQRGQTFC*QDISCL
Trigger: AAGGCATGAAATATCTTGCAAGCAAAAAGTTTGTCC...TCTCTGATAGTGCAGAGACTTACCAGAAGACACAAGGAATTGTACTGAAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCCCAGAATTCAAGTTTaGGACTCCAATATGACAGGA +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITPRIQV*DSNMTG
Trigger: TCCTGTCATATTGGAGTCCAAAACTTGAATTCTGGG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTCCTGATGATGTAATGAGGGTGGGGTGTATTGGCAATCAGTACATTTCCTTAAACGTGATTTTCACATaGCAGTGTTCTCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: SPDDVMRVGCIGNQYISLNVIFT*QCSQEC
Trigger: ACATTCTTGAGAACACTGCAATGTGAAAATCACGTT...TAAGGAAATGTACTGATTGCCAATACACCCCACCCTCATTACATCATCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 90 bp GCATTTCCATGTAGGAATGCAATCCAGAGTTTATGGAACAGAACCTaGTTATTCTTGTGTGAAAAGTCTGAGCATCTAGAGTTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: AFPCRNAIQSLWNRT*LFLCEKSEHLEFPF
Trigger: AAAGGGAAACTCTAGATGCTCAGACTTTTCACACAAGAATAATCAGGTTCTGTTCCATAAACTCTGGATTGCATTCCTACATGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 90 bp TTGAGTTTGCAGACTTTCCAAAGCCATCCACTTCACTGGCAGCTTTaGACCTGTTTTGTTGTGTACACTATAGTATTCTTTATCATACAT +
Preference number: 5 (lower is better)
Translates to: LSLQTFQSHPLHWQL*TCFVVYTIVFFIIH
Trigger: ATGTATGATAAAGAATACTATAGTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGCAAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCCATTCATCTCGGACTTaGCTAGTGCCTCTTTACACT +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVHSSRT*LVPLYT
Trigger: AGTGTAAAGAGGCACTAGCAAAGTCCGAGATGAATG...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTTTGCCTACAAAGAAGTaGATGAACCGGTCCTTTACA +
Preference number: 5 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVLPTKK*MNRSFT
Trigger: TGTAAAGGACCGGTTCATCAACTTCTTTGTAGGCAA...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTTGGAGACATCTCACATaGTTTTTGTTGACGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITWRHLT*FLLTIL
Trigger: CAAGATCGTCAACAAAAACAATGTGAGATGTCTCCA...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACAAGGGGTGCACTATTaGGGAAAACCTTGTAGATTG +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLQGVHY*GKPCRL
Trigger: CAATCTACAAGGTTTTCCCAAATAGTGCACCCCTTG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp ATGCACTATACAGTAGCAAGCACAAAATTCCACAGAATGAAGCATCACAAAGTTACAGTGCTGTTGATATaGAGACAACACCAGCAATCA +
Preference number: 5 (lower is better)
Translates to: MHYTVASTKFHRMKHHKVTVLLI*RQHQQS
Trigger: TGATTGCTGGTGTTGTCTCAATATCAACAGCACTGT...AACTTTGTGATGCTTCATTCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCGAGGAGTGTGTACTCTaGCATCGTAGCGAACTAATT +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVEECVL*HRSELI
Trigger: AATTAGTTCGCTACGATGCAAGAGTACACACTCCTC...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGAGGAGTGTGTACTCTaGCATCGTAGCGAACTAATT +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLEECVL*HRSELI
Trigger: AATTAGTTCGCTACGATGCAAGAGTACACACTCCTC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACATGCCTTTGGCTACTaGAAGACCAAAGCCAATAAG +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLHAFGY*KTKANK
Trigger: CTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCATG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCCAAAATCAGCAACCTaGACTGTGAATTTTTCATCC +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITPKSAT*TVNFSS
Trigger: GGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAACTTCACTGGCAGCTTaGCACCTGTTTTGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLTSLAA*HLFCCV
Trigger: TACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTACAACTAGAGCCATGTaGATGTTATCTTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITTTRAM*MLSFQT
Trigger: TGTTTGGAAAGATAACATCAACATGGCTCTAGTTGT...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCATCTCACATTGTTTTaGTTGACGATCTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITHLTLF*LTILLK
Trigger: CTTCAACAAGATCGTCAACAAAAACAATGTGAGATG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAGGACGGTTGAAGAAATaGCTTGCTTCCACTCTATAT +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLGRLKK*LASTLY
Trigger: ATATAGAGTGGAAGCAAGCAATTTCTTCAACCGTCC...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCAACTCCCCAAAAGTTTaGTTTCCAATTGCTTGCGAG +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVNSPKV*FPIACE
Trigger: CTCGCAAGCAATTGGAAACAAAACTTTTGGGGAGTT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AGTTCAGCTGCAGGTATAGGCAGTGACAAGTATCTAATTCTTAGAAGAATCACTCACAGTGCAGTGTTTTaGTGGCCTAACAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: SSAAGIGSDKYLILRRITHSAVF*WPNKIF
Trigger: AAAAATTTTGTTAGGCCACAAAAACACTGCACTGTG...AGTGATTCTTCTAAGAATTAGATACTTGTCACTGCCTATACCTGCAGCTGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTAAAGTCGTTGACATATTaGATAGGGAATGCACACATG +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLKSLTY*IGNAHM
Trigger: CATGTGTGCATTCCCTATCAAATATGTCAACGACTT...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTATTGTTGACGATCTTGTaGAAGAAGTCGTTGACATAT +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLLLTIL*KKSLTY
Trigger: ATATGTCAACGACTTCTTCAACAAGATCGTCAACAA...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCTTTTTGTTGACGATCTaGTTGAAGAAGTCGTTGACA +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVFLLTI*LKKSLT
Trigger: TGTCAACGACTTCTTCAACAAGATCGTCAACAAAAA...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AACGTGATTTTCACATTGCAGTGTTCTCAAGAATGTATATACAAGTGTGTAGTCATTTCGGCGAAATACTaGTTATTACAGGATCCACAT +
Preference number: 5 (lower is better)
Translates to: NVIFTLQCSQECIYKCVVISAKY*LLQDPH
Trigger: ATGTGGATCCTGTAATAACAAGTATTTCGCCGAAAT...GACTACACACTTGTATATACATTCTTGAGAACACTGCAATGTGAAAATCACGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS-3UTR CAA 90 bp AAGTCCTATAATAGTGCAATTTTGGCAAGAGCAAAGAATATCGATGGCCTTTTACACAGTGCAGTGTTTTaGTGGCCTAACAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: KSYNSAILARAKNIDGLLHSAVF*WPNKIF
Trigger: AAAAATTTTGTTAGGCCACAAAAACACTGCACTGTG...TAAAAGGCCATCGATATTCTTTGCTCTTGCCAAAATTGCACTATTATAGGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CCA 72 bp CGCCTCCTCTCAGCAAGTCAGCTGTCGCCCCGCATCTaGCTCGCGCCCTCCACTCGGCTCCGCATCTGCTCA +
Preference number: 6 (lower is better)
Translates to: RLLSASQLSPRI*LAPSTRLRICS
Trigger: TGAGCAGATGCGGAGCCGAGTGGAGGGCGCGAGCCAGATGCGGGGCGACAGCTGACTTGCTGAGAGGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000456159.1
CDS CCA 72 bp CTCTTCATCACCACCCTTTCGGTGCCCAGGAACCAGTaGAGAAGTCAGCGGCGCAAGGACCACACGCGCGCT +
Preference number: 6 (lower is better)
Translates to: LFITTLSVPRNQ*RSQRRKDHTRA
Trigger: AGCGCGCGTGTGGTCCTTGCGCCGCTGACTTCTCCACTGGTTCCTGGGCACCGAAAGGGTGGTGATGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS CCA 72 bp CTCCCAGGGCGCTCACCACACAGTCAGGACACTGGCTaGGCTCTTCTATCTGTGGGGAGAATATGCAGTGAA +
Preference number: 6 (lower is better)
Translates to: LPGRSPHSQDTG*ALLSVGRICSE
Trigger: TTCACTGCATATTCTCCCCACAGATAGAAGAGCCCAGCCAGTGTCCTGACTGTGTGGTGAGCGCCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CCA 72 bp GGCTTTGCTGCTGCAGTCCTGACATGGGAAACAATCTaGGTGTTCCAGCACAGGCCCAGTCTTGTACTCAGC +
Preference number: 6 (lower is better)
Translates to: GFAAAVLTWETI*VFQHRPSLVLS
Trigger: GCTGAGTACAAGACTGGGCCTGTGCTGGAACACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS CAA 90 bp CCTACAAAGAAGTTGATGAACCGGTCCTTTACAGATGAAAGGACTTaGGCTCCCAGGGCGCTCACCACACAGTCAGGACACTGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PTKKLMNRSFTDERT*APRALTTQSGHWLG
Trigger: GCCCAGCCAGTGTCCTGACTGTGTGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGGTTCATCAACTTCTTTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 72 bp TGCACAATCAGGCTACTGGGCCCAATCACTACATGCTaGACTGCCTGGACCAGCTCTGGATTTAGAGCACTG +
Preference number: 6 (lower is better)
Translates to: CTIRLLGPITTC*TAWTSSGFRAL
Trigger: CAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CAA 72 bp ATCTCGGACTTTGCTAGTGCCTCTTTACACTCCCCATaGCTCCTCTGCACCAAGGTAAACAGGAGCACGAGG +
Preference number: 6 (lower is better)
Translates to: ISDFASASLHSP*LLCTKVNRSTR
Trigger: CCTCGTGCTCCTGTTTACCTTGGTGCAGAGGAGCAATGGGGAGTGTAAAGAGGCACTAGCAAAGTCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS CAA 72 bp AAGTTGATGAACCGGTCCTTTACAGATGAAAGGACTTaGGCTCCCAGGGCGCTCACCACACAGTCAGGACAC +
Preference number: 6 (lower is better)
Translates to: KLMNRSFTDERT*APRALTTQSGH
Trigger: GTGTCCTGACTGTGTGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGGTTCATCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 72 bp TGGGAAAACCTTGTAGATTGCAGGCAGACAGATCTGTaGAGTCCATGTCCCGCTCAGGCATTCCTCCGATCG +
Preference number: 6 (lower is better)
Translates to: WENLVDCRQTDL*SPCPAQAFLRS
Trigger: CGATCGGAGGAATGCCTGAGCGGGACATGGACTCAACAGATCTGTCTGCCTGCAATCTACAAGGTTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS CAA 90 bp TTCACATTCATCTCGGACTTTGCTAGTGCCTCTTTACACTCCCCATaGCTCCTCTGCACCAAGGTAAACAGGAGCACGAGGATGCCAGGT +
Preference number: 6 (lower is better)
Translates to: FTFISDFASASLHSP*LLCTKVNRSTRMPG
Trigger: ACCTGGCATCCTCGTGCTCCTGTTTACCTTGGTGCAGAGGAGCAATGGGGAGTGTAAAGAGGCACTAGCAAAGTCCGAGATGAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS TCA 72 bp ACACCTCCTGATAAATTGGCTTTGCTGCTGCAGTCCTaGCATGGGAAACAATCTGGGTGTTCCAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: TPPDKLALLLQS*HGKQSGCSSTG
Trigger: GCCTGTGCTGGAACACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS TCA 72 bp GCCTACAAAGAAGTTGATGAACCGGTCCTTTACAGATaGAAGGACTTTGGCTCCCAGGGCGCTCACCACACA +
Preference number: 6 (lower is better)
Translates to: AYKEVDEPVLYR*KDFGSQGAHHT
Trigger: TGTGTGGTGAGCGCCCTGGGAGCCAAAGTCCTTTCATCTGTAAAGGACCGGTTCATCAACTTCTTTGTAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 72 bp AAATGCACAATCAGGCTACTGGGCCCAATCACTACATaGTGCACTGCCTGGACCAGCTCTGGATTTAGAGCA +
Preference number: 6 (lower is better)
Translates to: KCTIRLLGPITT*CTAWTSSGFRA
Trigger: TGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CCA 72 bp CAGGGTCTTCACCTCCAATCTAGCACATTTTCTGCCTaGAAAATCGGGTCACTCCCACCCGAATATTGCGCT +
Preference number: 6 (lower is better)
Translates to: QGLHLQSSTFSA*KIGSLPPEYCA
Trigger: AGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGCAGAAAATGTGCTAGATTGGAGGTGAAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495962.1
CDS TCA 72 bp GCTGCACTGCCTGGACCAGCTCTGGATTTAGAGCACTaGGGTCAATGTGGACAGTATTTTGCAGTAATGGAC +
Preference number: 6 (lower is better)
Translates to: AALPGPALDLEH*GQCGQYFAVMD
Trigger: GTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS TCA 72 bp CGCAGGCAGATTCCCAGGAGCGAGAGGACATTGGGATaGCTAAAATCTTTCATGATGATTCCCTCGGTCAGA +
Preference number: 6 (lower is better)
Translates to: RRQIPRSERTLG*LKSFMMIPSVR
Trigger: TCTGACCGAGGGAATCATCATGAAAGATTTTAGTCATCCCAATGTCCTCTCGCTCCTGGGAATCTGCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp GACATAGTGCTCCCCAATGAAAGTAGAGAAGATCGCTaGTATCCGGGACACCAGTTCAGAAAAGGATGGGCG +
Preference number: 6 (lower is better)
Translates to: DIVLPNESREDR*YPGHQFRKGWA
Trigger: CGCCCATCCTTTTCTGAACTGGTGTCCCGGATATCAGCGATCTTCTCTACTTTCATTGGGGAGCACTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp AGTGTGGACTGTTGCTTTGACATAGTACTAGCACTATaGTGTCTCCCAGAAGGAGGCTGGTCGTGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: SVDCCFDIVLAL*CLPEGGWSCVH
Trigger: GTGGACACACGACCAGCCTCCTTCTGGGAGACATCATAGTGCTAGTACTATGTCAAAGCAACAGTCCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp GGATGCCAGGTGCAAGCACAGCGGGGGCCTTCATTATaGGAGGTTTATCATATGGGAAGCATTCTGCTAAAC +
Preference number: 6 (lower is better)
Translates to: GCQVQAQRGPSL*EVYHMGSILLN
Trigger: GTTTAGCAGAATGCTTCCCATATGATAAACCTCTCATAATGAAGGCCCCCGCTGTGCTTGCACCTGGCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS CCA 72 bp GCAGGACTGGAAATGTCTGCAGCCCAAGCCATTCAATaGGATCTTCGTGATCTTCTTCCCAGTGATAACCAG +
Preference number: 6 (lower is better)
Translates to: AGLEMSAAQAIQ*DLRDLLPSDNQ
Trigger: CTGGTTATCACTGGGAAGAAGATCACGAAGATCCCATTGAATGGCTTGGGCTGCAGACATTTCCAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS CAA 72 bp TCCGAAATCCAAAGTCCCAGCCACATATGGTCAGCCTaGTCCCTCCTTCAAGGGGTGCACTATTTGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SEIQSPSHIWSA*SLLQGVHYLGK
Trigger: TTTTCCCAAATAGTGCACCCCTTGAAGGAGGGACAAGGCTGACCATATGTGGCTGGGACTTTGGATTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 90 bp AATGCACACATGGCAGATCGATCCATTGGTTCGGCAGAATCTGGCTaGCTTTGTGCGAACACCCCGAAAAGAATGTCATCATTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: NAHMADRSIGSAESG*LCANTPKRMSSFRL
Trigger: CAGCCTGAATGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 90 bp TGCACTATTTGGGAAAACCTTGTAGATTGCAGGCAGACAGATCTGTaGAGTCCATGTCCCGCTCAGGCATTCCTCCGATCGCACACATTT +
Preference number: 6 (lower is better)
Translates to: CTIWENLVDCRQTDL*SPCPAQAFLRSHTF
Trigger: AAATGTGTGCGATCGGAGGAATGCCTGAGCGGGACATGGACTCAACAGATCTGTCTGCCTGCAATCTACAAGGTTTTCCCAAATAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS GCA 72 bp TGGCAGATCGATCCATTGGTTCGGCAGAATCTGGCTTaGTTTGTGCGAACACCCCGAAAAGAATGTCATCAT +
Preference number: 6 (lower is better)
Translates to: WQIDPLVRQNLA*FVRTPRKECHH
Trigger: ATGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CCA 72 bp TTTGATAGGGAATGCACACATGGCAGATCGATCCATTaGTTCGGCAGAATCTGGCTTGCTTTGTGCGAACAC +
Preference number: 6 (lower is better)
Translates to: FDRECTHGRSIH*FGRIWLALCEH
Trigger: GTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCTATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CCA 72 bp TATTATTCCTCCGAAATCCAAAGTCCCAGCCACATATaGTCAGCCTTGTCCCTCCTTCAAGGGGTGCACTAT +
Preference number: 6 (lower is better)
Translates to: YYSSEIQSPSHI*SALSLLQGVHY
Trigger: ATAGTGCACCCCTTGAAGGAGGGACAAGGCTGACCATATGTGGCTGGGACTTTGGATTTCGGAGGAATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CCA 72 bp AACAGTTATATCAAAGGTGTTTACGTCAGGATAAGGTaGGGCTCCTCTTGTCATCAGCTCCCAGAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: NSYIKGVYVRIR*GSSCHQLPEEH
Trigger: GTGCTCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTTATCCTGACGTAAACACCTTTGATATAACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CAA 72 bp ATGGCAGATCGATCCATTGGTTCGGCAGAATCTGGCTaGCTTTGTGCGAACACCCCGAAAAGAATGTCATCA +
Preference number: 6 (lower is better)
Translates to: MADRSIGSAESG*LCANTPKRMSS
Trigger: TGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 90 bp TATTATTCCTCCGAAATCCAAAGTCCCAGCCACATATGGTCAGCCTaGTCCCTCCTTCAAGGGGTGCACTATTTGGGAAAACCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: YYSSEIQSPSHIWSA*SLLQGVHYLGKPCR
Trigger: TCTACAAGGTTTTCCCAAATAGTGCACCCCTTGAAGGAGGGACAAGGCTGACCATATGTGGCTGGGACTTTGGATTTCGGAGGAATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 72 bp CTTTCCAAACACCTCCTGATAAATTGGCTTTGCTGCTaGAGTCCTGACATGGGAAACAATCTGGGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: LSKHLLINWLCC*SPDMGNNLGVP
Trigger: TGGAACACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTGTTTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS GCA 72 bp GCTTTGGTTTTCAGGGGGAGTTGCAGATTCAGCTGTTaGAGGGAAGGAGTGGTACAACAGATTATCTCTGAA +
Preference number: 6 (lower is better)
Translates to: ALVFRGSCRFSC*REGVVQQIISE
Trigger: TTCAGAGATAATCTGTTGTACCACTCCTTCCCTGCAACAGCTGAATCTGCAACTCCCCCTGAAAACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
CDS CAA 72 bp AGATCGATCCATTGGTTCGGCAGAATCTGGCTTGCTTaGTGCGAACACCCCGAAAAGAATGTCATCATTCAG +
Preference number: 6 (lower is better)
Translates to: RSIHWFGRIWLA*CEHPEKNVIIQ
Trigger: CTGAATGATGACATTCTTTTCGGGGTGTTCGCACAAAGCAAGCCAGATTCTGCCGAACCAATGGATCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 72 bp CAACCAAAATGCCCTCTTCCTATGACTTCATTGAAATaGACAATCAGGCTACTGGGCCCAATCACTACATGC +
Preference number: 6 (lower is better)
Translates to: QPKCPLPMTSLK*TIRLLGPITTC
Trigger: GCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTTCAATGAAGTCATAGGAAGAGGGCATTTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp AAGGTGGATATAGATGTTAAGAGGACTTCGCTGAATTaGCCCATGAATAAGTCAACGCGCTGCAAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: KVDIDVKRTSLN*PMNKSTRCKAV
Trigger: CACAGCTTTGCAGCGCGTTGACTTATTCATGGGTCAATTCAGCGAAGTCCTCTTAACATCTATATCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000495962.1
CDS GCA 72 bp TATCTTTCCAAACACCTCCTGATAAATTGGCTTTGCTaGTGCAGTCCTGACATGGGAAACAATCTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: YLSKHLLINWLC*CSPDMGNNLGV
Trigger: AACACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTGTTTGGAAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS GCA 72 bp TGTTATCTTTCCAAACACCTCCTGATAAATTGGCTTTaGTGCTGCAGTCCTGACATGGGAAACAATCTGGGT +
Preference number: 6 (lower is better)
Translates to: CYLSKHLLINWL*CCSPDMGNNLG
Trigger: ACCCAGATTGTTTCCCATGTCAGGACTGCAGCAGCAAAGCCAATTTATCAGGAGGTGTTTGGAAAGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS GCA 72 bp CTTGTTGAAGAAGTCGTTGACATATTTGATAGGGAATaGACACATGGCAGATCGATCCATTGGTTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: LVEEVVDIFDRE*THGRSIHWFGR
Trigger: TCTGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS GCA 72 bp GCTCGCTGTTCAATTTCAGCAGGTCATTGGGGACCGTaGATAAAACGGCTTCAGAATGTAAGTGTATATTCT +
Preference number: 6 (lower is better)
Translates to: ARCSISAGHWGP*IKRLQNVSVYS
Trigger: AGAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
ENST00000454623.1
CDS CAA 72 bp GAAGCTGATACTTCATATTCACATTCATCTCGGACTTaGCTAGTGCCTCTTTACACTCCCCATTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: EADTSYSHSSRT*LVPLYTPHCSS
Trigger: AGAGGAGCAATGGGGAGTGTAAAGAGGCACTAGCAAAGTCCGAGATGAATGTGAATATGAAGTATCAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS CAA 72 bp CACTTACAAGCCTATCCAAATGAGGAGTGTGTACTCTaGCATCGTAGCGAACTAATTCACTGCCCAGATCTT +
Preference number: 6 (lower is better)
Translates to: HLQAYPNEECVL*HRSELIHCPDL
Trigger: AAGATCTGGGCAGTGAATTAGTTCGCTACGATGCAAGAGTACACACTCCTCATTTGGATAGGCTTGTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp CTGTTGCAGGGAAGGAGTGGTACAACAGATTATCTCTaGATTAGAGCGATGTTGACATGCCACTGTAAAGTT +
Preference number: 6 (lower is better)
Translates to: LLQGRSGTTDYL*IRAMLTCHCKV
Trigger: AACTTTACAGTGGCATGTCAACATCGCTCTAATTCAGAGATAATCTGTTGTACCACTCCTTCCCTGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
CDS CCA 72 bp CTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATTaGGGACCGTGCATAAAACGGCTTCAGAATGTAAGT +
Preference number: 6 (lower is better)
Translates to: LYLARCSISAGH*GPCIKRLQNVS
Trigger: ACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
ENST00000454623.1
CDS CCA 72 bp TGGACCAGCTCTGGATTTAGAGCACTGAGGTCAATGTaGACAGTATTTTGCAGTAATGGACTGGATATATCA +
Preference number: 6 (lower is better)
Translates to: WTSSGFRALRSM*TVFCSNGLDIS
Trigger: TGATATATCCAGTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTGCTCTAAATCCAGAGCTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS CAA 72 bp TCTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATaGGGGACCGTGCATAAAACGGCTTCAGAATGTAAG +
Preference number: 6 (lower is better)
Translates to: SIFSSLFNFSRS*GTVHKTASECK
Trigger: CTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
ENST00000454623.1
CDS CAA 72 bp GCAGACTTTCCAAAGCCATCCACTTCACTGGCAGCTTaGCACCTGTTTTGTTGTGTACACTATAGTATTCTT +
Preference number: 6 (lower is better)
Translates to: ADFPKPSTSLAA*HLFCCVHYSIL
Trigger: AAGAATACTATAGTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CAA 72 bp GAGGTTTATCATATGGGAAGCATTCTGCTAAACTCTTaGATTTACTCTTCATCACCACCCTTTCGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: EVYHMGSILLNS*IYSSSPPFRCP
Trigger: TGGGCACCGAAAGGGTGGTGATGAAGAGTAAATCAAAGAGTTTAGCAGAATGCTTCCCATATGATAAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456159.1
CDS CAA 90 bp TGCTTCCACTCTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATaGGGGACCGTGCATAAAACGGCTTCAGAATGTAAGTGTATATTC +
Preference number: 6 (lower is better)
Translates to: CFHSIFSSLFNFSRS*GTVHKTASECKCIF
Trigger: GAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAGAGTGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS CAA 90 bp AATCCCACCTCTATATTTAGCTCGCTGTTCAATTTCAGCAGGTCATaGGGGACCGTGCATAAAACGGCTTCAGAATGTAAGTGTATATTC +
Preference number: 6 (lower is better)
Translates to: NPTSIFSSLFNFSRS*GTVHKTASECKCIF
Trigger: GAATATACACTTACATTCTGAAGCCGTTTTATGCACGGTCCCCAATGACCTGCTGAAATTGAACAGCGAGCTAAATATAGAGGTGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422097.1
CDS CAA 90 bp ACATTGTTTTTGTTGACGATCTTGTTGAAGAAGTCGTTGACATATTaGATAGGGAATGCACACATGGCAGATCGATCCATTGGTTCGGCA +
Preference number: 6 (lower is better)
Translates to: TLFLLTILLKKSLTY*IGNAHMADRSIGSA
Trigger: TGCCGAACCAATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAACAAAAACAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS TCA 72 bp GATCATCATAGTAGGTGTCGACAACTAGAGCCATGTTaGTGTTATCTTTCCAAACACCTCCTGATAAATTGG +
Preference number: 6 (lower is better)
Translates to: DHHSRCRQLEPC*CYLSKHLLINW
Trigger: CCAATTTATCAGGAGGTGTTTGGAAAGATAACATCAACATGGCTCTAGTTGTCGACACCTACTATGATGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
ENST00000456159.1
CDS TCA 72 bp GATGAATTTCATAGACAATGGGATCTTCACGGTAACTaGAGATGCTTGTCTCTCGGTTGGCTAAGTCAATTT +
Preference number: 6 (lower is better)
Translates to: DEFHRQWDLHGN*RCLSLGWLSQF
Trigger: AAATTGACTTAGCCAACCGAGAGACAAGCATCTTCAGTTACCGTGAAGATCCCATTGTCTATGAAATTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
ENST00000436117.2
CDS TCA 72 bp TTCATGCACATTTATGACCATTCTCGGGACACTAACTaGATTCAGGTTTTTCCCAACACCTGTTATTGTGCT +
Preference number: 6 (lower is better)
Translates to: FMHIYDHSRDTN*IQVFPNTCYCA
Trigger: AGCACAATAACAGGTGTTGGGAAAAACCTGAATTCAGTTAGTGTCCCGAGAATGGTCATAAATGTGCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000422097.1
CDS CAA 72 bp TTGTTGACGATCTTGTTGAAGAAGTCGTTGACATATTaGATAGGGAATGCACACATGGCAGATCGATCCATT +
Preference number: 6 (lower is better)
Translates to: LLTILLKKSLTY*IGNAHMADRSI
Trigger: AATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 90 bp AGACATCTCACATTGTTTTTGTTGACGATCTTGTTGAAGAAGTCGTaGACATATTTGATAGGGAATGCACACATGGCAGATCGATCCATT +
Preference number: 6 (lower is better)
Translates to: RHLTLFLLTILLKKS*TYLIGNAHMADRSI
Trigger: AATGGATCGATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAACAAAAACAATGTGAGATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 90 bp TATTCTTTATCATACATGTCTCTGGCAAGACCAAAATCAGCAACCTaGACTGTGAATTTTTCATCCAGCATACAGTTTCTTGCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: YSLSYMSLARPKSAT*TVNFSSSIQFLAAK
Trigger: CTTGGCTGCAAGAAACTGTATGCTGGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATGTATGATAAAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CAA 90 bp TTTGAGTTTGCAGACTTTCCAAAGCCATCCACTTCACTGGCAGCTTaGCACCTGTTTTGTTGTGTACACTATAGTATTCTTTATCATACA +
Preference number: 6 (lower is better)
Translates to: FEFADFPKPSTSLAA*HLFCCVHYSILYHT
Trigger: TGTATGATAAAGAATACTATAGTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGCAAACTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp TGTAGGAATGCAATCCAGAGTTTATGGAACAGAACCTaGTTATTCTTGTGTGAAAAGTCTGAGCATCTAGAG +
Preference number: 6 (lower is better)
Translates to: CRNAIQSLWNRT*LFLCEKSEHLE
Trigger: CTCTAGATGCTCAGACTTTTCACACAAGAATAATCAGGTTCTGTTCCATAAACTCTGGATTGCATTCCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 72 bp GTTGAACTATTACTTTTCCAAGGACGGTTGAAGAAATaGCTTGCTTCCACTCTATATTTAGCTCGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: VELLLFQGRLKK*LASTLYLARCS
Trigger: TGAACAGCGAGCTAAATATAGAGTGGAAGCAAGCAATTTCTTCAACCGTCCTTGGAAAAGTAATAGTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000454623.1
CDS CAA 72 bp TCATACATGTCTCTGGCAAGACCAAAATCAGCAACCTaGACTGTGAATTTTTCATCCAGCATACAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: SYMSLARPKSAT*TVNFSSSIQFL
Trigger: AAGAAACTGTATGCTGGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS CAA 72 bp ACATTGTTTTTGTTGACGATCTTGTTGAAGAAGTCGTaGACATATTTGATAGGGAATGCACACATGGCAGAT +
Preference number: 6 (lower is better)
Translates to: TLFLLTILLKKS*TYLIGNAHMAD
Trigger: ATCTGCCATGTGTGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAACAAAAACAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 72 bp TGGAGACATCTCACATTGTTTTTGTTGACGATCTTGTaGAAGAAGTCGTTGACATATTTGATAGGGAATGCA +
Preference number: 6 (lower is better)
Translates to: WRHLTLFLLTIL*KKSLTYLIGNA
Trigger: TGCATTCCCTATCAAATATGTCAACGACTTCTTCAACAAGATCGTCAACAAAAACAATGTGAGATGTCTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318493.11
ENST00000397752.8
ENST00000436117.2
CDS CAA 72 bp CTTTTTGCTTGCAAGATATTTCATGCCTTTGGCTACTaGAAGACCAAAGCCAATAAGATCTTTTACAGTTGG +
Preference number: 6 (lower is better)
Translates to: LFACKIFHAFGY*KTKANKIFYSW
Trigger: CCAACTGTAAAAGATCTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCATGAAATATCTTGCAAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8
CDS TCA 72 bp TTTTTGCTTGCAAGATATTTCATGCCTTTGGCTACTTaGAGACCAAAGCCAATAAGATCTTTTACAGTTGGA +
Preference number: 6 (lower is better)
Translates to: FLLARYFMPLAT*RPKPIRSFTVG
Trigger: TCCAACTGTAAAAGATCTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCATGAAATATCTTGCAAGCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318493.11
ENST00000397752.8