Pregenerated sensors for MEST (Homo sapiens)
Ensembl gene IDs: ENSG00000106484Ensembl transcript IDs: ENST00000223215.10, ENST00000341441.9, ENST00000393187.5, ENST00000416162.7, ENST00000421001.5, ENST00000427521.6, ENST00000433159.5, ENST00000437637.6, ENST00000462132.6, ENST00000475188.1, ENST00000488093.1, ENST00000494868.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTAGCTCCTGGCAATGCTaGAAAATTTTTATCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WVILKIKYYPILQLLNFISSWQC*KIFIPE Trigger: CTCTGGGATAAAAATTTTCCAGCATTGCCAGGAGCT...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTGTACCTGAAAGCTCCTaGCAATGCTGGAAAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: WVILKIKYYPILQLLNFIVPESS*QCWKIF Trigger: AAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTAC...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGCACTCCGGCGTGCGCTaGGGCACTGCGCTTGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQHSGVR*GTALAR Trigger: CCTCGCAAGCGCAGTGCCGCAGCGCACGCCGGAGTG...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGCAGAGCCCGCAGCCGTaGAGAGCTGGCCAGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQQSPQP*RAGQQR Trigger: CCGCTGCTGGCCAGCTCTGCACGGCTGCGGGCTCTG...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGAGCGGGCTGCGAGGGTaGACGGGGAGGCTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQSGLRG*TGRLHS Trigger: GGAGTGGAGCCTCCCCGTGCACCCTCGCAGCCCGCT...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000427521.6 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGACTCCTGGAGCGGGCTaGGAGGGTGCACGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQTPGAG*EGARGG Trigger: GCCTCCCCGTGCACCCTCGCAGCCCGCTCCAGGAGT...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000427521.6 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGCTGCCGCAGAGGAGGTaGCGGGGTGTGCTGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQLPQRR*RGVLVA Trigger: GGCAACCAGCACACCCCGGCACCTCCTCTGCGGCAG...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR CCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTGCAGCCGTGCAGAGCTaGCCAGCAGCGGGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFIAAVQS*PAAGAQ Trigger: CTGCGCCCCCGCTGCTGGCCAGCTCTGCACGGCTGC...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR GCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTCTTGCGAGGCGCAGCTaGCGCAGAGGAGGTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFILARRS*RRGGAG Trigger: CCCGGCACCTCCTCTGCGGCAGCTGCGCCTCGCAAG...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR GCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTCGTGCGCTGCGGCACTaGGCTTGCGAGGCGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFIRALRH*ACEAQL Trigger: CAGCTGCGCCTCGCAAGCGCAGTGCCGCAGCGCACG...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR GCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTGGCCGCGTTATCCCATaGCGCCCGCCGCAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFIGRVIP*RPPQRC Trigger: GCAACGCTGCGGCGGGCGGCATGGGATAACGCGGCC...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR CCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGCCCCTAGGACTGGTGTaGCCCACGCACACGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQPLGLV*PTHTSH Trigger: GTGGCTCGTGTGCGTGGGCCACACCAGTCCTAGGGG...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000427521.6 |
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| CDS-3UTR GCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTACAGCCACTCCGGCGTaGGCTGCGGCACTGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFITATPA*AAALRL Trigger: CAAGCGCAGTGCCGCAGCGCACGCCGGAGTGGCTGT...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR CCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTGATCTCGGCGCACCATaGCCGCGTTATCCCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFIDLGAP*PRYPMP Trigger: CGGCATGGGATAACGCGGCCATGGTGCGCCGAGATC...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS-3UTR TCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGTCTTTAATGTGTACCTaGAAGCTCCTGGCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQSLMCT*KLLAML Trigger: CAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGA...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGAGCTCCTGGCAATGCTaGAAAATTTTTATCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQSSWQC*KIFIPE Trigger: CTCTGGGATAAAAATTTTCCAGCATTGCCAGGAGCT...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR TCA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTTCTTTAATGTGTACCTaGAAGCTCCTGGCAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVILKIKYYPILQLLNFISLMCT*KLLAML Trigger: CAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGA...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGGTACCTGAAAGCTCCTaGCAATGCTGGAAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQVPESS*QCWKIF Trigger: AAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTAC...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CCA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGACGATAGTGCAGCTTTaGGTGATCTTGAAAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQTIVQL*VILKIK Trigger: TTTGATTTTCAAGATCACCCAAAGCTGCACTATCGT...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS GCA 90 bp | CAAAGTTGCACAAAGTCCGGTTTCTCCCGCTCCAGCCACCGCCGCTaGGCGGGGCAGGTTTCCTTTACAGCAGCGCGACGTGGTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QSCTKSGFSRSSHRR*AGQVSFTAARRGQH Trigger: ATGCTGACCACGTCGCGCTGCTGTAAAGGAAACCTGCCCCGCGCAGCGGCGGTGGCTGGAGCGGGAGAAACCGGACTTTGTGCAACTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CCA 90 bp | CCCTCATCCACCAAGCTAGTAAACAGATTCATGGGATGGCCACTATaGCCAAAGTTGCACAAAGTCCGGTTTCTCCCGCTCCAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PSSTKLVNRFMGWPL*PKLHKVRFLPLQPP Trigger: CGGTGGCTGGAGCGGGAGAAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTACTAGCTTGGTGGATGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CCA 90 bp | CCCACCACTCCCTCATCCACCAAGCTAGTAAACAGATTCATGGGATaGCCACTATGGCCAAAGTTGCACAAAGTCCGGTTTCTCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: PTTPSSTKLVNRFMG*PLWPKLHKVRFLPL Trigger: GAGCGGGAGAAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTACTAGCTTGGTGGATGAGGGAGTGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGGCTGCGGCACTGCGCTaGCGAGGCGCAGCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQAAALR*RGAAAA Trigger: TGCGGCAGCTGCGCCTCGCAAGCGCAGTGCCGCAGC...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223215.10 |
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| CDS CCA 90 bp | CGCAGGAAGATAAGTGTGAGGAGAACTCAGAATGTTCAATATGGCTaGAACCTCAGAGGCCATGCAGTCTGGGCCATGCAGTCTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: RRKISVRRTQNVQYG*NLRGHAVWAMQSDP Trigger: TGGGTCAGACTGCATGGCCCAGACTGCATGGCCTCTGAGGTTCCAGCCATATTGAACATTCTGAGTTCTCCTCACACTTATCTTCCTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS GCA 90 bp | CCTAAGGAAAACAGCTACTTTCTTTCAGACAGGCAATTTTCTAGCTaGCTGGGAGCTAGGAGGAGGAAAGGGCTTCAGCACAGGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: PKENSYFLSDRQFSS*LGARRRKGLQHRHS Trigger: ACTGTGCCTGTGCTGAAGCCCTTTCCTCCTCCTAGCTCCCAGGCAGCTAGAAAATTGCCTGTCTGAAAGAAAGTAGCTGTTTTCCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433159.5 |
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| CDS GCA 90 bp | AGACCTTCCCAAATCTACAAGAAAGAAACGATGATTTGGGCTTTCTaGTCCTGCCCCTCCCTTTCACCAGACCTACAGTTGCACAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RPSQIYKKETMIWAF*SCPSLSPDLQLHRS Trigger: GCTCCTGTGCAACTGTAGGTCTGGTGAAAGGGAGGGGCAGGAGCAGAAAGCCCAAATCATCGTTTCTTTCTTGTAGATTTGGGAAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475188.1 |
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| CDS CCA 90 bp | GCAAGCGGCCAACACCTTTGCTTTAAAATATCAAGCCTTAGGATTTaGCCCAGAATTGTAATGGCAGCAACTTTTCACGACATTGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: ASGQHLCFKISSLRI*PRIVMAATFHDIAL Trigger: TAGAGCAATGTCGTGAAAAGTTGCTGCCATTACAATTCTGGGCCAAATCCTAAGGCTTGATATTTTAAAGCAAAGGTGTTGGCCGCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 90 bp | AAGGAACAGAACAAGCAATCCCCACTCTCCACAAAAACACGTCTCTaGAAACCAAAGCAAAGGGTAACTTCTTACCTGTCAATGACTAAG | + |
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Preference number: 5 (lower is better) Translates to: KEQNKQSPLSTKTRL*KPKQRVTSYLSMTK Trigger: CTTAGTCATTGACAGGTAAGAAGTTACCCTTTGCTTTGGTTTCCAGAGACGTGTTTTTGTGGAGAGTGGGGATTGCTTGTTCTGTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 90 bp | AATTCACAAGGAAGAGGATTTAACTACTGCCAGTTACAGGAGCTATaGCCCTTAAAAGGTCCCAGCATTATTTACGTCAGTACAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: NSQGRGFNYCQLQEL*PLKGPSIIYVSTNP Trigger: AGGATTTGTACTGACGTAAATAATGCTGGGACCTTTTAAGGGCCATAGCTCCTGTAACTGGCAGTAGTTAAATCCTCTTCCTTGTGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494868.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGGACGATAGTGCAGCTTaGGGTGATCTTGAAAATCAA | + |
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Preference number: 5 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQDDSAA*GDLENQ Trigger: TTGATTTTCAAGATCACCCAAAGCTGCACTATCGTC...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CAA 90 bp | TTCTTTAATGTGTACCTGAAAGCTCCTGGCAATGCTGGAAAATTTTTATCCCAGCAGCTTTGGGTGATCTaGAAAATCAAATACTATCCT | + |
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Preference number: 5 (lower is better) Translates to: FFNVYLKAPGNAGKFLSQQLWVI*KIKYYP Trigger: AGGATAGTATTTGATTTTCAAGATCACCCAAAGCTG...CTGGGATAAAAATTTTCCAGCATTGCCAGGAGCTTTCAGGTACACATTAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CAA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTGACGATAGTGCAGCTTaGGGTGATCTTGAAAATCAA | + |
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Preference number: 5 (lower is better) Translates to: WVILKIKYYPILQLLNFIDDSAA*GDLENQ Trigger: TTGATTTTCAAGATCACCCAAAGCTGCACTATCGTC...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS-3UTR CAA 90 bp | TGGGTGATCTTGAAAATCAAATACTATCCTATACTCCAGCTGCTTAACTTCATTCAGCTTTGGGTGATCTaGAAAATCAAATACTATCCT | + |
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Preference number: 5 (lower is better) Translates to: WVILKIKYYPILQLLNFIQLWVI*KIKYYP Trigger: AGGATAGTATTTGATTTTCAAGATCACCCAAAGCTG...AATGAAGTTAAGCAGCTGGAGTATAGGATAGTATTTGATTTTCAAGATCACCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223215.10 ENST00000427521.6 |
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| CDS GCA 72 bp | TCCGCGCACAAGCCCATCGCCCCCGAGCCCAGCATGTaGTGCCGCCTTCTCCCTGCCAGGCGTCAGCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SAHKPIAPEPSM*CRLLPARRQRH Trigger: GTGGCGCTGACGCCTGGCAGGGAGAAGGCGGCAGCACATGCTGGGCTCGGGGGCGATGGGCTTGTGCGCGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341441.9 |
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| CDS CCA 72 bp | CTGCGCGGGGCAGGTTTCCTTTACAGCAGCGCGACGTaGTCAGCATGCCAGACGCCTGGCCACAGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LRGAGFLYSSAT*SACQTPGHSSA Trigger: GGCGCTGCTGTGGCCAGGCGTCTGGCATGCTGACCACGTCGCGCTGCTGTAAAGGAAACCTGCCCCGCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393187.5 |
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| CDS GCA 72 bp | ACACCCCCTCCTCAAGTAGGCAGAGCGGGCGCGGAATaGGTGCCGCCTGTCGGTAGAGTTTTCGCCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TPPPQVGRAGAE*VPPVGRVFAQR Trigger: CCTCTGGGCGAAAACTCTACCGACAGGCGGCACGCATTCCGCGCCCGCTCTGCCTACTTGAGGAGGGGGTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462132.6 |
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| CDS TCA 72 bp | TCCATGTTTCGGAGAACCGGTTGCGCATGCGCTTCCTaGGGCCAGAGGTTCTCGGCCTTCACCCTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SMFRRTGCACAS*GQRFSAFTLFP Trigger: TGGGAACAGGGTGAAGGCCGAGAACCTCTGGCCTCAGGAAGCGCATGCGCAACCGGTTCTCCGAAACATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341441.9 ENST00000416162.7 |
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| CDS CAA 72 bp | CCTAACCCAAGGAGGTCCCGCGTTCTGAACATTCCATaGCGGGCAGGAGTGACACCCCCTCCTCAAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: PNPRRSRVLNIP*RAGVTPPPQVG Trigger: GCCTACTTGAGGAGGGGGTGTCACTCCTGCCCGCAATGGAATGTTCAGAACGCGGGACCTCCTTGGGTTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437637.6 ENST00000462132.6 |
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| CDS CAA 90 bp | CCACCACTCCCTCATCCTGATGGCGTCGCCGCGAGACGAACCACTTaGAAAACCCGCGAAACCAAGGTGAACAATCCCACGACGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: PPLPHPDGVAARRTT*KTRETKVNNPTTIP Trigger: CGGGATCGTCGTGGGATTGTTCACCTTGGTTTCGCGGGTTTTCAAAGTGGTTCGTCTCGCGGCGACGCCATCAGGATGAGGGAGTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437637.6 |
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| CDS CAA 90 bp | TCTAGAAATCCTAACCCAAGGAGGTCCCGCGTTCTGAACATTCCATaGCGGGCAGGAGTGACACCCCCTCCTCAAGTAGGCAGAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRNPNPRRSRVLNIP*RAGVTPPPQVGRAG Trigger: GCCCGCTCTGCCTACTTGAGGAGGGGGTGTCACTCCTGCCCGCAATGGAATGTTCAGAACGCGGGACCTCCTTGGGTTAGGATTTCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437637.6 ENST00000462132.6 |
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| CDS CAA 90 bp | ACCAAGCTAGTAAACAGATTCATGGGATGGCCACTATGGCCAAAGTaGCACAAAGTCCGGTTTCTCCCGCTCCAGCCACCGCCGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: TKLVNRFMGWPLWPK*HKVRFLPLQPPPLR Trigger: GCGCAGCGGCGGTGGCTGGAGCGGGAGAAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTACTAGCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CAA 72 bp | CCTCATCCTGATGGCGTCGCCGCGAGACGAACCACTTaGAAAACCCGCGAAACCAAGGTGAACAATCCCACG | + |
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Preference number: 6 (lower is better) Translates to: PHPDGVAARRTT*KTRETKVNNPT Trigger: CGTGGGATTGTTCACCTTGGTTTCGCGGGTTTTCAAAGTGGTTCGTCTCGCGGCGACGCCATCAGGATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437637.6 |
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| CDS GCA 72 bp | TCTGCTCCTGCCCCTCCCTTTCACCAGACCTACAGTTaGACAGGAGCTTCAGCCCTATCTTGGCTTAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SAPAPPFHQTYS*TGASALSWLNR Trigger: TCTGTTAAGCCAAGATAGGGCTGAAGCTCCTGTGCAACTGTAGGTCTGGTGAAAGGGAGGGGCAGGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475188.1 |
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| CDS CAA 72 bp | GTAAACAGATTCATGGGATGGCCACTATGGCCAAAGTaGCACAAAGTCCGGTTTCTCCCGCTCCAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: VNRFMGWPLWPK*HKVRFLPLQPP Trigger: CGGTGGCTGGAGCGGGAGAAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CCA 72 bp | GCTACTTTCTTTCAGACAGGCAATTTTCTAGCTGCCTaGGAGCTAGGAGGAGGAAAGGGCTTCAGCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATFFQTGNFLAA*ELGGGKGFSTG Trigger: GCCTGTGCTGAAGCCCTTTCCTCCTCCTAGCTCCCAGGCAGCTAGAAAATTGCCTGTCTGAAAGAAAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433159.5 |
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| CDS TCA 72 bp | GCCATGCAGTCTGGGCCATGCAGTCTGACCCATAAGTaGTTTATGAATTCCTTCTACTTCCCTGGCAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: AMQSGPCSLTHK*FMNSFYFPGKR Trigger: CCGCTTGCCAGGGAAGTAGAAGGAATTCATAAATCACTTATGGGTCAGACTGCATGGCCCAGACTGCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 72 bp | ACCAAGCTAGTAAACAGATTCATGGGATGGCCACTATaGCCAAAGTTGCACAAAGTCCGGTTTCTCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TKLVNRFMGWPL*PKLHKVRFLPL Trigger: GAGCGGGAGAAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTACTAGCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CCA 72 bp | ATAAGTGTGAGGAGAACTCAGAATGTTCAATATGGCTaGAACCTCAGAGGCCATGCAGTCTGGGCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: ISVRRTQNVQYG*NLRGHAVWAMQ Trigger: CTGCATGGCCCAGACTGCATGGCCTCTGAGGTTCCAGCCATATTGAACATTCTGAGTTCTCCTCACACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS TCA 72 bp | AGGTCAGACCTTCCCAAATCTACAAGAAAGAAACGATaGTTTGGGCTTTCTGCTCCTGCCCCTCCCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RSDLPKSTRKKR*FGLSAPAPPFH Trigger: GTGAAAGGGAGGGGCAGGAGCAGAAAGCCCAAATCATCGTTTCTTTCTTGTAGATTTGGGAAGGTCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475188.1 |
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| CDS CCA 72 bp | CCCTCATCCACCAAGCTAGTAAACAGATTCATGGGATaGCCACTATGGCCAAAGTTGCACAAAGTCCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PSSTKLVNRFMG*PLWPKLHKVRF Trigger: AAACCGGACTTTGTGCAACTTTGGCCATAGTGGCCATCCCATGAATCTGTTTACTAGCTTGGTGGATGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000393187.5 ENST00000421001.5 |
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| CDS CAA 72 bp | CAGACCTTCCCAAATCTACAAGAAAGAAACGATGATTaGGGCTTTCTGCTCCTGCCCCTCCCTTTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: QTFPNLQERNDD*GFLLLPLPFTR Trigger: TCTGGTGAAAGGGAGGGGCAGGAGCAGAAAGCCCAAATCATCGTTTCTTTCTTGTAGATTTGGGAAGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475188.1 |
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| CDS GCA 72 bp | CAAATCTACAAGAAAGAAACGATGATTTGGGCTTTCTaGTCCTGCCCCTCCCTTTCACCAGACCTACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: QIYKKETMIWAF*SCPSLSPDLQL Trigger: CAACTGTAGGTCTGGTGAAAGGGAGGGGCAGGAGCAGAAAGCCCAAATCATCGTTTCTTTCTTGTAGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475188.1 |
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| CDS GCA 72 bp | GCCCAGAATTGTAATGGCAGCAACTTTTCACGACATTaGTCTAGGCCACAATCTTTGACAGTGACACTTACC | + |
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Preference number: 6 (lower is better) Translates to: AQNCNGSNFSRH*SRPQSLTVTLT Trigger: GGTAAGTGTCACTGTCAAAGATTGTGGCCTAGAGCAATGTCGTGAAAAGTTGCTGCCATTACAATTCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS GCA 72 bp | ATTCCTTCTACTTCCCTGGCAAGCGGCCAACACCTTTaGTTTAAAATATCAAGCCTTAGGATTTGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: IPSTSLASGQHL*FKISSLRIWPR Trigger: TCTGGGCCAAATCCTAAGGCTTGATATTTTAAAGCAAAGGTGTTGGCCGCTTGCCAGGGAAGTAGAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 72 bp | AACAAGCAATCCCCACTCTCCACAAAAACACGTCTCTaGAAACCAAAGCAAAGGGTAACTTCTTACCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: NKQSPLSTKTRL*KPKQRVTSYLS Trigger: TGACAGGTAAGAAGTTACCCTTTGCTTTGGTTTCCAGAGACGTGTTTTTGTGGAGAGTGGGGATTGCTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 72 bp | GGAAGAGGATTTAACTACTGCCAGTTACAGGAGCTATaGCCCTTAAAAGGTCCCAGCATTATTTACGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GRGFNYCQLQEL*PLKGPSIIYVS Trigger: ACTGACGTAAATAATGCTGGGACCTTTTAAGGGCCATAGCTCCTGTAACTGGCAGTAGTTAAATCCTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494868.1 |
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| CDS CAA 72 bp | AGCAACTTTTCACGACATTGCTCTAGGCCACAATCTTaGACAGTGACACTTACCCTCGAGAGAATACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SNFSRHCSRPQS*TVTLTLERIQR Trigger: TCTTTGTATTCTCTCGAGGGTAAGTGTCACTGTCAAAGATTGTGGCCTAGAGCAATGTCGTGAAAAGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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| CDS CCA 72 bp | CAACACCTTTGCTTTAAAATATCAAGCCTTAGGATTTaGCCCAGAATTGTAATGGCAGCAACTTTTCACGAC | + |
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Preference number: 6 (lower is better) Translates to: QHLCFKISSLRI*PRIVMAATFHD Trigger: GTCGTGAAAAGTTGCTGCCATTACAATTCTGGGCCAAATCCTAAGGCTTGATATTTTAAAGCAAAGGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488093.1 |
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