RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MESD (Homo sapiens)

Ensembl gene IDs: ENSG00000117899

Ensembl transcript IDs: ENST00000261758.6, ENST00000422879.3, ENST00000559537.1, ENST00000560244.5, ENST00000561312.5, ENST00000619987.4

Found 660 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTaGGCCTGCACTGGGCCCCAGCCTCCCCGCTGGCCTTCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: RPKLLPNSMCYAPPT*ACTGPQPPRWPSCC
Trigger: GCAGCAGGAAGGCCAGCGGGGAGGCTGGGGCCCAGTGCAGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTaGCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGCCTGCCCCAT +
Preference number: 1 (lower is better)
Translates to: FLLCMAPLSTTKPSP*LGGSEAQVRPCLPH
Trigger: ATGGGGCAGGCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp GGCTGGGAAGACTCATGCAGCTGGGGTTGGAGCAGGTGGGCCTCCTaGGTATCCCTCTCTCTACGTGAAACACTGTACGCAGCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: GWEDSCSWGWSRWAS*VSLSLRETLYAASP
Trigger: TGGAGAGGCTGCGTACAGTGTTTCACGTAGAGAGAGGGATACCCAGGAGGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp CCAGAGAACCTACATGGCTTGTCCAAGGCCAGGCAGCTTCGGTGGTaGAGCCTAGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCC +
Preference number: 1 (lower is better)
Translates to: PENLHGLSKARQLRW*SLAQACWLCWKKPS
Trigger: GGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCTGGCCTTGGACAAGCCATGTAGGTTCTCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR TCA 90 bp GAAGCACCTCCCAGCTCACGGCTCACACCTGCTGGGGTCCTCTTCTaGTCACTTCTCCTGTGCAACCAGTGCAACCTGGACTGCCTTTCA +
Preference number: 1 (lower is better)
Translates to: EAPPSSRLTPAGVLF*SLLLCNQCNLDCLS
Trigger: TGAAAGGCAGTCCAGGTTGCACTGGTTGCACAGGAGAAGTGATCAGAAGAGGACCCCAGCAGGTGTGAGCCGTGAGCTGGGAGGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp GGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTGGCAGTaGGGCTCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCA +
Preference number: 1 (lower is better)
Translates to: GSPVYNKAITLPRWQ*GSGETLPAPYKHMS
Trigger: TGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 90 bp AGACAGGGCTTGGTTCAGCCACGGCATGATTCAGGGACTCGTTTATaGCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGACAGTTCTC +
Preference number: 1 (lower is better)
Translates to: RQGLVQPRHDSGTRL*HQGVALSPHCQTVL
Trigger: GAGAACTGTCTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAAGCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp AAGCCATCACCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAG +
Preference number: 1 (lower is better)
Translates to: KPSPCLGGSEAQVRP*LPHTNTCQAPSVAE
Trigger: CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp TTCAGCCACGGCATGATTCAGGGACTCGTTTATGCCACCAGGGTGTaGCGCTCTCTCCCCACTGTCAGACAGTTCTCTTCTCCAAGGGCG +
Preference number: 1 (lower is better)
Translates to: FSHGMIQGLVYATRV*RSLPTVRQFSSPRA
Trigger: CGCCCTTGGAGAAGAGAACTGTCTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp ATCTTATCCACATGTCTGTGCCTGGGCTGGGAAGACTCATGCAGCTaGGGTTGGAGCAGGTGGGCCTCCTGGGTATCCCTCTCTCTACGT +
Preference number: 1 (lower is better)
Translates to: ILSTCLCLGWEDSCS*GWSRWASWVSLSLR
Trigger: ACGTAGAGAGAGGGATACCCAGGAGGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTCCCAGCCCAGGCACAGACATGTGGATAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp TGTGGCCAGATGTGTGGGAGGGAGCTCAGGATGTTCGTCACCACATaGAAAGAGCCCGTCAGCTCAGAACACAGGAGAGGCTGCCCTTTC +
Preference number: 1 (lower is better)
Translates to: CGQMCGRELRMFVTT*KEPVSSEHRRGCPF
Trigger: GAAAGGGCAGCCTCTCCTGTGTTCTGAGCTGACGGGCTCTTTCCATGTGGTGACGAACATCCTGAGCTCCCTCCCACACATCTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 90 bp CTGTTTGGAGAGAGACATGTAAACGCGGTGAGCCAAGTCCAGGCTTaGAGAAGGCTGTGGGCACCAACTGTGGCCAGATGTGTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: LFGERHVNAVSQVQA*RRLWAPTVARCVGG
Trigger: CCCTCCCACACATCTGGCCACAGTTGGTGCCCACAGCCTTCTCCAAGCCTGGACTTGGCTCACCGCGTTTACATGTCTCTCTCCAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 90 bp CCGAGCCCTGGCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTaGAGAGAGACATGTAAACGCGGTGAGCCAAGTCCAGGCTTGGAG +
Preference number: 1 (lower is better)
Translates to: PSPGMVRSAYILSSV*RETCKRGEPSPGLE
Trigger: CTCCAAGCCTGGACTTGGCTCACCGCGTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR TCA 90 bp TACAACAGAAAAAGCCCACAGACAGGGCTTGGTTCAGCCACGGCATaGTTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: YNRKSPQTGLGSATA*FRDSFMPPGCGALS
Trigger: GGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGCTTTTTCTGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp AGGCTGGGGCTGGAAATGTTTAAATCTTATCCACATGTCTGTGCCTaGGCTGGGAAGACTCATGCAGCTGGGGTTGGAGCAGGTGGGCCT +
Preference number: 1 (lower is better)
Translates to: RLGLEMFKSYPHVCA*AGKTHAAGVGAGGP
Trigger: AGGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTCCCAGCCCAGGCACAGACATGTGGATAAGATTTAAACATTTCCAGCCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp CCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATaGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGAC +
Preference number: 1 (lower is better)
Translates to: PRPCLAGGQTRLTRA*GLRWEKQVQIKLAD
Trigger: GTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
3UTR GCA 90 bp TTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGT +
Preference number: 1 (lower is better)
Translates to: FLGGLLPYSLPHFLL*MAPLSTTKPSPCLG
Trigger: ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp TTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: LAGGQTRLTRAWGLR*EKQVQIKLADERQA
Trigger: TGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
3UTR TCA 90 bp TGGCTTCAAAGGCAGCTTCCGGCCCATCTGGGTGACACTGGACACTaGGGATCACAAAGCCAAAATCTTCCAAGTTGTGCCCATCCCTTG +
Preference number: 1 (lower is better)
Translates to: WLQRQLPAHLGDTGH*GSQSQNLPSCAHPL
Trigger: CAAGGGATGGGCACAACTTGGAAGATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCTGCCTTTGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 90 bp GCCACTTCTAGCCACAGGGTCTTAGCTCAGACTGTTTCCTCTGCCTaGCTTACTCTATTTCTCCTCTCCTCCTCTTGCCCTCAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: ATSSHRVLAQTVSSA*LTLFLLSSSCPQRR
Trigger: CCTTCTCTGAGGGCAAGAGGAGGAGAGGAGAAATAGAGTAAGGCAGGCAGAGGAAACAGTCTGAGCTAAGACCCTGTGGCTAGAAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp CTGGGGTCCTCTTCTGATCACTTCTCCTGTGCAACCAGTGCAACCTaGACTGCCTTTCACACCCACCCCATCACAATTAAGATCCACCAG +
Preference number: 1 (lower is better)
Translates to: LGSSSDHFSCATSAT*TAFHTHPITIKIHQ
Trigger: CTGGTGGATCTTAATTGTGATGGGGTGGGTGTGAAAGGCAGTCCAGGTTGCACTGGTTGCACAGGAGAAGTGATCAGAAGAGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp TGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGCCCTaGGTACAACAGAAAAAGCCCACAGACAGGGCTTGGTTCAGCCAC +
Preference number: 1 (lower is better)
Translates to: WAIMAMQDSNPIKLP*VQQKKPTDRAWFSH
Trigger: GTGGCTGAACCAAGCCCTGTCTGTGGGCTTTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp TGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCATaGCACCCATTATCATCACAAAAACTAGGTGCAGGGAGAGTCCTC +
Preference number: 1 (lower is better)
Translates to: CWLCWKKPSRRDMSA*HPLSSQKLGAGRVL
Trigger: GAGGACTCTCCCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR TCA 90 bp GAACCTTCAGGATCTAGAACCTTCAGGAGCTCCTGGATGGTTTTATaGTTTGACAGATGCTCCCCTCCGCCTTCCCGCACCTCCTCTCTT +
Preference number: 1 (lower is better)
Translates to: EPSGSRTFRSSWMVL*FDRCSPPPSRTSSL
Trigger: AAGAGAGGAGGTGCGGGAAGGCGGAGGGGAGCATCTGTCAAATCATAAAACCATCCAGGAGCTCCTGAAGGTTCTAGATCCTGAAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 90 bp GAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTaGAGGGAGAGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCT +
Preference number: 1 (lower is better)
Translates to: EGHVSMTPIIITKTR*RESPQRGCMGGREA
Trigger: AGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACTCTCCCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp AGGAGATCTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTaGGCTTCAGAGAGGGGCAGGGACTTGCTGGTTGTCCTAGGGGCA +
Preference number: 1 (lower is better)
Translates to: RRSCRSMPSFDGWEH*ASERGRDLLVVLGA
Trigger: TGCCCCTAGGACAACCAGCAAGTCCCTGCCCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp GAGTGGGGAAGGAGATCTTGTAGATCAATGCCATCATTTGATGGATaGGAACACTGGGCTTCAGAGAGGGGCAGGGACTTGCTGGTTGTC +
Preference number: 1 (lower is better)
Translates to: EWGRRSCRSMPSFDG*EHWASERGRDLLVV
Trigger: GACAACCAGCAAGTCCCTGCCCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp AATGGCACTTTCCCGGTGGTGATAAATGCATGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGGATGCTCAA +
Preference number: 1 (lower is better)
Translates to: NGTFPVVINACCLPR*AEYRRGFPCPSDAQ
Trigger: TTGAGCATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGCATTTATCACCACCGGGAAAGTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR TCA 90 bp GGACTATGCAGTGAAACAGTGGTTCAAACCTCACCATCACCCTGCTaGTGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCT +
Preference number: 1 (lower is better)
Translates to: GLCSETVVQTSPSPC*CRTPSAMACTTEAP
Trigger: AGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTTCACTGCATAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp GTTGGCTCCCCTCAGTGTCAACTAGGATTGCTTGAAGGCTGGGGCTaGAAATGTTTAAATCTTATCCACATGTCTGTGCCTGGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: VGSPQCQLGLLEGWG*KCLNLIHMSVPGLG
Trigger: TCCCAGCCCAGGCACAGACATGTGGATAAGATTTAAACATTTCCAGCCCCAGCCTTCAAGCAATCCTAGTTGACACTGAGGGGAGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp GAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAGGATCACAAAGCCAAAATCTTCCAA +
Preference number: 1 (lower is better)
Translates to: EQMAFVGFKGSFRPI*VTLDTEDHKAKIFQ
Trigger: TTGGAAGATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp GGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTGGCATaGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGAGACAT +
Preference number: 1 (lower is better)
Translates to: GRDTYRSPTVCRALA*YALLTSSPLFGERH
Trigger: ATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 90 bp TCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTaGCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: SREEIHIEVLLCAEP*HGTLCLHPLLCLER
Trigger: TCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR TCA 90 bp AAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGGTaGCACTGGACACTGAGGATCACAAAGCCAAAATCTTCCAAGTTG +
Preference number: 1 (lower is better)
Translates to: KWHSLASKAASGPSG*HWTLRITKPKSSKL
Trigger: CAACTTGGAAGATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 90 bp CAGAATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTaGTTGGAGGGGAGTGGAATCTCAGTAGAGTTGATGACTCACCAA +
Preference number: 1 (lower is better)
Translates to: QNLLSDQSRPPNHSR*LEGSGISVELMTHQ
Trigger: TTGGTGAGTCATCAACTCTACTGAGATTCCACTCCCCTCCAAGCACCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp TTGAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTaGCGAGCCCTGGCATGGTACGCTCTGCTTACATCCTCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: LRTFKGRDTYRSPTV*RALAWYALLTSSPL
Trigger: CAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTaGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGT +
Preference number: 1 (lower is better)
Translates to: HCTQPNISFAHESAD*ADCFSAQLMLAPLS
Trigger: ACTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp TATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTaGCCTGAGTACAACAGAAAAAGCCCACAGACAGGGCTTGGTTCA +
Preference number: 1 (lower is better)
Translates to: YTGPLWLCRTVTPSN*PEYNRKSPQTGLGS
Trigger: TGAACCAAGCCCTGTCTGTGGGCTTTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp GAATTCTGTGGTTCTAATGAAATCCCAGGGGATGCCAAATGGAGCTaGTCTCTAGAACCTTCAGGATCTAGAACCTTCAGGAGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: EFCGSNEIPGDAKWS*SLEPSGSRTFRSSW
Trigger: CCAGGAGCTCCTGAAGGTTCTAGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATTAGAACCACAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR TCA 90 bp CAGAGAACTGAGAATGCAGAGGGTGTGGTTCTTTCGAGGGAAATGTaGGCAGCTACCAAATTAAGGGGAAACAGATGCTGTGAGGCCAAA +
Preference number: 1 (lower is better)
Translates to: QRTENAEGVVLSREM*AATKLRGNRCCEAK
Trigger: TTTGGCCTCACAGCATCTGTTTCCCCTTAATTTGGTAGCTGCTCACATTTCCCTCGAAAGAACCACACCCTCTGCATTCTCAGTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 90 bp AAAACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATaGCTTGTCCAAGGCCAGGCAGCTTCGGTGGTGAAGCCTAGCACA +
Preference number: 1 (lower is better)
Translates to: KTLICSRKLKPREPT*LVQGQAASVVKPST
Trigger: TGTGCTAGGCTTCACCACCGAAGCTGCCTGGCCTTGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp ATGGAGGAATTCTGTGGTTCTAATGAAATCCCAGGGGATGCCAAATaGAGCTGGTCTCTAGAACCTTCAGGATCTAGAACCTTCAGGAGC +
Preference number: 1 (lower is better)
Translates to: MEEFCGSNEIPGDAK*SWSLEPSGSRTFRS
Trigger: GCTCCTGAAGGTTCTAGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATTAGAACCACAGAATTCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR TCA 90 bp TGCCCAAGGCTGGCAAGGATAGATCTATTGTTGGCAAGGGTAAGCTaGCTAAACCACTTGGGAGGGCAATTTGGCAATACACACCAAAAT +
Preference number: 1 (lower is better)
Translates to: CPRLARIDLLLARVS*LNHLGGQFGNTHQN
Trigger: ATTTTGGTGTGTATTGCCAAATTGCCCTCCCAAGTGGTTTAGTCAGCTTACCCTTGCCAACAATAGATCTATCCTTGCCAGCCTTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp CAGAGAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTaGGTTGAGAACATGCTTTGTACTAAACGTGGGTACAACCTAAGA +
Preference number: 1 (lower is better)
Translates to: QRRQMPGMEGAVIFC*VENMLCTKRGYNLR
Trigger: TCTTAGGTTGTACCCACGTTTAGTACAAAGCATGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 90 bp AAAGAGAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTCAAC +
Preference number: 1 (lower is better)
Translates to: KEKISFIWLAMSRTC*VLHISKLSGGCHFN
Trigger: GTTGAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 90 bp AAGAAAGAGAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTC +
Preference number: 1 (lower is better)
Translates to: KKEKISFIWLAMSRT*CVLHISKLSGGCHF
Trigger: GAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp AGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTaGGGTGCACCATTTACTCCACACTCTTGGTCAAATTTCTTCACC +
Preference number: 1 (lower is better)
Translates to: RWRVLCGFQGFRVLI*GAPFTPHSWSNFFT
Trigger: GGTGAAGAAATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp GTATCCCTCTCTCTACGTGAAACACTGTACGCAGCCTCTCCAGTATaGTGGCTTCAGGGTAGCCAATTAAGATATGGTTTTACAATCTAT +
Preference number: 1 (lower is better)
Translates to: VSLSLRETLYAASPV*WLQGSQLRYGFTIY
Trigger: ATAGATTGTAAAACCATATCTTAATTGGCTACCCTGAAGCCACCATACTGGAGAGGCTGCGTACAGTGTTTCACGTAGAGAGAGGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp CTTCCTCCATCACCACATTTCTATCTGGTCTTACCTAACCAGGGTTaGGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGT +
Preference number: 1 (lower is better)
Translates to: LPPSPHFYLVLPNQG*EHSREEIHIEVLLC
Trigger: ACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGTTAGGTAAGACCAGATAGAAATGTGGTGATGGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 90 bp AAAGCAATTATCTCATCAAAACAGCTGCTTTATACTGGGCCATTATaGCTATGCAGGACAGTAACCCCATCAAACTGCCCTGAGTACAAC +
Preference number: 1 (lower is better)
Translates to: KAIISSKQLLYTGPL*LCRTVTPSNCPEYN
Trigger: GTTGTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGTTTTGATGAGATAATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp TACTCAATTAAGTCAAGAGTTTTAAAGTCTTCTCTGATCAGAATTTaGTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTGCTTGG +
Preference number: 1 (lower is better)
Translates to: YSIKSRVLKSSLIRI*YLIRAGHPITAGAW
Trigger: CCAAGCACCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTGATCAGAGAAGACTTTAAAACTCTTGACTTAATTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp ATTATCTCATCAAAACAGCTGCTTTATACTGGGCCATTATGGCTATaGAGGACAGTAACCCCATCAAACTGCCCTGAGTACAACAGAAAA +
Preference number: 1 (lower is better)
Translates to: IISSKQLLYTGPLWL*RTVTPSNCPEYNRK
Trigger: TTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGTTTTGATGAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 90 bp CGGCAGAGAAGCTCCACGGGCAATAATGATAATGATCATTGTGGTTaGTATTCAATGTTCAGCCTTGCACTTTGCACAACATGTTATAAT +
Preference number: 1 (lower is better)
Translates to: RQRSSTGNNDNDHCG*YSMFSLALCTTCYN
Trigger: ATTATAACATGTTGTGCAAAGTGCAAGGCTGAACATTGAATAGCAACCACAATGATCATTATCATTATTGCCCGTGGAGCTTCTCTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 90 bp TTCTATTCTCCGCATTTCCTGCATAGATTTTGGATTTACACACCCTaGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATATTTTAC +
Preference number: 1 (lower is better)
Translates to: FYSPHFLHRFWIYTP*LPGYRHLSSQSIFY
Trigger: GTAAAATATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAAATGCGGAGAATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 90 bp ATTATAACTTGCCACCAGCCACTGAAAGAAAATTGCTATATTTGTTaGCTCATTTGCTTGGAAAGTGGCCCTTTATTCAACAAAAGTATC +
Preference number: 1 (lower is better)
Translates to: IITCHQPLKENCYIC*LICLESGPLFNKSI
Trigger: GATACTTTTGTTGAATAAAGGGCCACTTTCCAAGCAAATGAGTCAACAAATATAGCAATTTTCTTTCAGTGGCTGGTGGCAAGTTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCCCCCAGCCTCCCCGCTaGCCTTCCTGCTGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HPADVGHLQLWPALLKHLPQPPR*PSCCLS
Trigger: GGAGAGGCAGCAGGAAGGCCAGCGGGGAGGCTGGGG...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CAA 90 bp CTTGTCCAAGGCCAGGCAGCTTCGGTGGTGAAGCCTAGCACAGGCTaGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGC +
Preference number: 2 (lower is better)
Translates to: LVQGQAASVVKPSTG*LAVLEEAIQEGHVS
Trigger: GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCTGGCCTTGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNRCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp GAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTAC +
Preference number: 2 (lower is better)
Translates to: EVSSLTVCPISCCAWLPCPKGPQ*SVARRY
Trigger: GTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGG...ACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTTCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 2 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTCCGGCCCATCTGGGTaGCACTGGACACTGAGGATC +
Preference number: 2 (lower is better)
Translates to: PISCCAWLPCLQQSHHPASGPSG*HWTLRI
Trigger: GATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGA...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGGTTGTGCCCATCCCTTaGCTTGCCCCAAGGCGGGGT +
Preference number: 2 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAEVVPIP*LAPRRG
Trigger: ACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAAC...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTAC +
Preference number: 2 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNPKGPQ*SVARRY
Trigger: GTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGG...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGCCCAATCACAGCAGGTaGTTGGAGGGGAGTGGAATC +
Preference number: 2 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWPNHSR*LEGSGI
Trigger: GATTCCACTCCCCTCCAAGCACCTGCTGTGATTGGG...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCCAGGCCCTGTTTGGCTaGAGGCCAAACACGTTTGAC +
Preference number: 2 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSQALFG*RPNTFD
Trigger: GTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAACTCCCCTCCCCGATaGGGAAGCCAGGCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNNSPPR*GSQAEA
Trigger: TGCTTCTGCCTGGCTTCCCCATCGGGGAGGGGAGTT...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGRCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp TTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAGGTGTGGCAGGCTTCTaGGGGCAGGGAGTGATCATC +
Preference number: 2 (lower is better)
Translates to: FGWRPNTFDKSMGAEVGKGVAGF*GQGVII
Trigger: GATGATCACTCCCTGCCCTCAGAAGCCTGCCACACC...TTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559537.1
3UTR-3UTR GCA 90 bp GGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 2 (lower is better)
Translates to: GGLLPYSLPHFLLCMAPLECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...CAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 2 (lower is better)
Translates to: PRPCLAGGQTRLTRAWGLAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp GAGAAGGCTGTGGGCACCAACTGTGGCCAGATGTGTGGGAGGGAGCTCAGGATGGCTCAAGCTGTGAACTaGAAGATGGAGAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: EKAVGTNCGQMCGRELRMAQAVN*KMESAV
Trigger: CACAGCACTCTCCATCTTGCAGTTCACAGCTTGAGC...CATCCTGAGCTCCCTCCCACACATCTGGCCACAGTTGGTGCCCACAGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGTATGCCACCAGGGTGTaGCGCTCTCTCCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQYATRV*RSLPTV
Trigger: GACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATA...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGGAAGACTCATGCAGCTaGGGTTGGAGCAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQEDSCS*GWSRWA
Trigger: GGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTC...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 2 (lower is better)
Translates to: SPQRGCMGGREAPRAIMISHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: QALFGWRPNTFDKSMGAERSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGCAGATCTGCACATTCTaGCATGGGAAGGCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWQICTF*HGKAPK
Trigger: CTTAGGAGCCTTCCCATGTCAGAATGTGCAGATCTG...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGACATCCGGTGTGCAGTTaGCTGAGACCACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: VGKTGPNQTGRREAGTGRHPVCS*LRPLPP
Trigger: GGGTGGGAGTGGTCTCAGGCAACTGCACACCGGATG...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGCTCACGGCTCACACCTaGTGGGGTCCTCTTCTGATC +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQLTAHT*WGPLLI
Trigger: GATCAGAAGAGGACCCCAGCAGGTGTGAGCCGTGAG...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 2 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTGCCCATCCCTTGCCTTaGCCCAAGGCGGGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFAHPLP*PKAGCP
Trigger: TGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGC...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp TCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAATCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 2 (lower is better)
Translates to: SLTVCPISCCAWLPCLQQSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...TTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGAACAGCAGCTTCCACTaGGACAAGCTACCACCGGCG +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQNSSFH*DKLPPA
Trigger: CGCCGGTGGTAGCTTGTCCCAGTGGAAGCTGCTGTT...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCGCAACCAGTGCAACCTaGACTGCCTTTCACACCCAC +
Preference number: 2 (lower is better)
Translates to: HPADVGHLQLWPALLKHLATSAT*TAFHTH
Trigger: GTGGGTGTGAAAGGCAGTCCAGGTTGCACTGGTTGC...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAGGCACCATCAGTAGCTaGGCACAGAGCTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTGTISS*AQSSSQ
Trigger: TTGGGAAGAGCTCTGTGCTCAGCTACTGATGGTGCC...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCCAGGGGTCTGCCCAATaGGTGGTGTGGCAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIQGSAQ*VVWQAS
Trigger: AGAAGCCTGCCACACCACTCATTGGGCAGACCCCTG...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559537.1
3UTR-3UTR GCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 2 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCAAATCTTCCAAGTTGTaGCCATCCCTTGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PISCCAWLPCLQQSHHPAKSSKL*PSLALP
Trigger: GGGCAAGGCAAGGGATGGGCACAACTTGGAAGATTT...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACATCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 2 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCCACACCCTGGCTTCCTaGCTACAGACATCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: HPADVGHLQLWPALLKHLHTLAS*LQTSEF
Trigger: GAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTG...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCATACGCTCCTCCAACCTaGGCCTGCACTGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: QPNISFAHESADWADCFSYAPPT*ACTGPQ
Trigger: CTGGGGCCCAGTGCAGGCCCAGGTTGGAGGAGCGTA...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGAGACCACATAAAACCTaGCAGACACCAAGAGTTCTC +
Preference number: 2 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQRPHKT*QTPRVL
Trigger: GAGAACTCTTGGTGTCTGTCAGGTTTTATGTGGTCT...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGAGAGGGTCCGGCCCATCTGGGTaGCACTGGACACTGAGGATC +
Preference number: 2 (lower is better)
Translates to: LVDQCHHLMDGNTGLQRGSGPSG*HWTLRI
Trigger: GATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGA...CCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCTCTGAGGGCAGGGAGTaGTCATCGCCTGGATTGGTC +
Preference number: 2 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGSEGRE*SSPGLV
Trigger: GACCAATCCAGGCGATGATCACTCCCTGCCCTCAGA...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
3UTR-3UTR GCA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 2 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAG +
Preference number: 2 (lower is better)
Translates to: PCLAGGQTRLTRAWGLRWMSRTC*VLHISK
Trigger: CTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACAT...CCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp ACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACA +
Preference number: 2 (lower is better)
Translates to: TVCPISCCAWLPCLQQSHAQVRP*LPHTNT
Trigger: TGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGC...ATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAAACACAGGCCTCACCCTaGAGAGGGCATGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKTQASP*RGHGLE
Trigger: CTCCAGGCCATGCCCTCTCCAGGGTGAGGCCTGTGT...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCCCCACAGACAGGGCTTaGTTCAGCCACGGCATGATT +
Preference number: 2 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPPTDRA*FSHGMI
Trigger: AATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGG...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTTATACTGGGCCATTATaGCTATGCAGGACAGTAACC +
Preference number: 2 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPYTGPL*LCRTVT
Trigger: GGTTACTGTCCTGCATAGCCATAATGGCCCAGTATA...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: SSCELQDGECCVGFRGLESFRPI*VTLDTE
Trigger: CTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCT...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGAGAGGGAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 2 (lower is better)
Translates to: LVDQCHHLMDGNTGLQRGSHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...CCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCGGTCTGCCCAATGAGTaGTGTGGCAGGCTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGGLPNE*CGRLLR
Trigger: CCTCAGAAGCCTGCCACACCACTCATTGGGCAGACC...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
3UTR CAA 90 bp CATCAAACTGCCCTGAGTACAACAGAAAAAGCCCACAGACAGGGCTaGGTTCAGCCACGGCATGATTCAGGGACTCGTTTATGCCACCAG +
Preference number: 2 (lower is better)
Translates to: HQTALSTTEKAHRQG*VQPRHDSGTRLCHQ
Trigger: CTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGCTTTTTCTGTTGTACTCAGGGCAGTTTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCGGTGACACTGGACACTaGGGATCACAAAGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: SGETLPAPYKHMSGTISSGDTGH*GSQSQN
Trigger: ATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACC...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp CTCACCCTCCTACCCAATTCCTGCTATTCAGACTGGCCAGGGGTCCTGCATCTTTTTCCAGCCCAGTCCTaGAATCATTTTGGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LTLLPNSCYSDWPGVLHLFPAQS*NHFGAS
Trigger: AGAGGCTCCAAAATGATTTCAGGACTGGGCTGGAAA...AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGAATTGGGTAGGAGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTATCAGGGACTCGTTTATaGCACCAGGGTGTGGCGCTC +
Preference number: 2 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLSGTRL*HQGVAL
Trigger: GAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGA...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACA +
Preference number: 2 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEAQVRP*LPHTNT
Trigger: TGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGC...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp GAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: ENIQGKRYISKSYCVPSPSFRPI*VTLDTE
Trigger: CTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCT...AGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp AATGAAATCCCAGGGGATGCCAAATGGAGCTGGTCTCTAGAACCTTCAGGATCTCTCAGAGAGGCTGTATaGGCGGCAGAGAAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: NEIPGDAKWSWSLEPSGSLREAV*AAEKLH
Trigger: GTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAG...AGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp AATGAAATCCCAGGGGATGCCAAATGGAGCTGGTCTCTAGAACCTTCAGGATCTGCTTGCTGGCTGTGCTaGAAGAAGCCATCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: NEIPGDAKWSWSLEPSGSACWLC*KKPSRR
Trigger: CCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGC...AGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGGTGCTTGGAGGGGAGTaGAATCTCAGTAGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQVLGGE*NLSRVD
Trigger: ATCAACTCTACTGAGATTCCACTCCCCTCCAAGCAC...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGTGGATTTACACACCCTaGCTTCCTGGCTACAGACAT +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQWIYTP*LPGYRH
Trigger: ATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGTTCCTGCATAGATTTTaGATTTACACACCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQFLHRF*IYTPWL
Trigger: AAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCAAGAGCAGGTGGAGATaGTTCAAAGAAAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSKSRWR*FKERED
Trigger: ATCTTCTCTTTCTTTGAACCATCTCCACCTGCTCTT...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 2 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNSHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp ACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATTGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: TVCPISCCAWLPCLQQSHCCLPR*AEYRRG
Trigger: TCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA...ATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 2 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CAA 90 bp AATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTGCTaGGAGGGGAGTGGAATCTCAGTAGAGTTGATGACTCACCAAGTG +
Preference number: 2 (lower is better)
Translates to: NLLSDQSRPPNHSRC*EGSGISVELMTHQV
Trigger: CACTTGGTGAGTCATCAACTCTACTGAGATTCCACTCCCCTCCAAGCACCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAAACAGAAACTACTGGGTaGAGTGGGGGCACACTGCAC +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKTETTG*SGGTLH
Trigger: GTGCAGTGTGCCCCCACTTCACCCAGTAGTTTCTGT...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 2 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTTCTCATCAAAACAGCTaGTTTATACTGGGCCATTAT +
Preference number: 2 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPSHQNS*FILGHY
Trigger: ATAATGGCCCAGTATAAAGCAGCTGTTTTGATGAGA...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp TGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGGATCAGGAGACTCATCATTaGTTTTCAGAGCAAATGGCA +
Preference number: 2 (lower is better)
Translates to: CCLPRWAEYRRGFPCPSDQETHH*FSEQMA
Trigger: TGCCATTTGCTCTGAAAAGCAATGATGAGTCTCCTG...ATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGACAGCTGCTTTATACTaGGCCATTATGGCTATGCAG +
Preference number: 2 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQTAALY*AIMAMQ
Trigger: CTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGT...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 2 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR TCA 90 bp GTAGCACATCATGTTACTCTATACGAAAGCACAGATTTAGGCACTTTATCAAAGCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: VAHHVTLYESTDLGTLSKRCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...CTTTGATAAAGTGCCTAAATCTGTGCTTTCGTATAGAGTAACATGATGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCCTTTCGAGGGAAATGTaGGCAGCTACCAAATTAAGG +
Preference number: 2 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPLSREM*AATKLR
Trigger: CCTTAATTTGGTAGCTGCTCACATTTCCCTCGAAAG...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAAGGTTCAGCCACGGCATaGTTCAGGGACTCGTTTATG +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKGSATA*FRDSFM
Trigger: CATAAACGAGTCCCTGAATCATGCCGTGGCTGAACC...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCATCCGGCCCATCTGGGTaGCACTGGACACTGAGGATC +
Preference number: 2 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPSGPSG*HWTLRI
Trigger: GATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGA...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGCATCCGGTGTGCAGTTaGCTGAGACCACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: YPAPFILLTAAILLCTLLHPVCS*LRPLPP
Trigger: GGGTGGGAGTGGTCTCAGGCAACTGCACACCGGATG...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTAGAAGTGGGGGCACACTaGACAGGAAACAATGAGACA +
Preference number: 2 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLEVGAH*TGNNET
Trigger: TGTCTCATTGTTTCCTGTGCAGTGTGCCCCCACTTC...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAACTACCAAACTCCATGTaGTACGCTCCTCCAACCTGG +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKLPNSM*YAPPTW
Trigger: CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAG...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTCCCGGTGGTGATAAATaGATGTTGCCTGCCAAGATG +
Preference number: 2 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFPGGDK*MLPAKM
Trigger: CATCTTGGCAGGCAACATGCATTTATCACCACCGGG...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGAGAGGGCCCGGTGGTGATAAATaGATGTTGCCTGCCAAGATG +
Preference number: 2 (lower is better)
Translates to: LVDQCHHLMDGNTGLQRGPGGDK*MLPAKM
Trigger: CATCTTGGCAGGCAACATGCATTTATCACCACCGGG...CCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCAGGACACCTTCAGCTATaGCCTGCACTACTGAAGCAC +
Preference number: 2 (lower is better)
Translates to: QPNISFAHESADWADCFSGHLQL*PALLKH
Trigger: GTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCC...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR TCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAATCCAAAGCAGAGAACTaGGAATGCAGAGGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKSKAEN*ECRGCG
Trigger: ACCACACCCTCTGCATTCTCAGTTCTCTGCTTTGGA...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCGTAACCCCATCAAACTaGCCTGAGTACAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPVTPSN*PEYNRK
Trigger: TTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTAC...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAAGGGCCATTATGGCTATaGAGGACAGTAACCCCATCA +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKGPLWL*RTVTPS
Trigger: TGATGGGGTTACTGTCCTGCATAGCCATAATGGCCC...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp TCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAACAGGAGACTCATCATTaGTTTTCAGAGCAAATGGCA +
Preference number: 2 (lower is better)
Translates to: SLTVCPISCCAWLPCLQQQETHH*FSEQMA
Trigger: TGCCATTTGCTCTGAAAAGCAATGATGAGTCTCCTG...TTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp ACCAGGGTTGAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: TRVENIQGKRYISKSYCVRSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...CACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR GCA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCAGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACA +
Preference number: 2 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPAQVRP*LPHTNT
Trigger: TGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGC...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGACCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACA +
Preference number: 2 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGPHFLL*MAPLST
Trigger: TGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGG...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTAGTTCTAATCTGGGGTaGACCATTTACTCCACACTC +
Preference number: 2 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFSSNLG*TIYSTL
Trigger: GAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACT...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CTAGTGGTCTACTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCAGTTTGTACAGTCCTTTaGAGCTTGCAAAACTCTTAT +
Preference number: 2 (lower is better)
Translates to: LVVYWNGWARCHLFTTPAVCTVL*SLQNSY
Trigger: ATAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAAC...TGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAGTAGACCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp TTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: FSEQMAFVGFKGSFRPIWKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...CCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: VGKTGPNQTGRREAGTGRKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGGGGAAGGCTCCTAAGTaGAAACAGAAGGTACAGGGC +
Preference number: 2 (lower is better)
Translates to: YPAPFILLTAAILLCTLLGKAPK*KQKVQG
Trigger: GCCCTGTACCTTCTGTTTCCACTTAGGAGCCTTCCC...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGAAGAGCAGGTGGAGATaGTTCAAAGAAAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEKSRWR*FKERED
Trigger: ATCTTCTCTTTCTTTGAACCATCTCCACCTGCTCTT...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp TACTCCACACTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCAGCAAATGGCATTCGTTaGCTTCAAAGGCAGCTTCCG +
Preference number: 2 (lower is better)
Translates to: YSTLLVKFLHLSELFLEPANGIR*LQRQLP
Trigger: CGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGC...TGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAATCAGACTGTTTCCTCTaGCTGCCTTACTCTATTTCT +
Preference number: 2 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKSDCFL*LPYSIS
Trigger: AGAAATAGAGTAAGGCAGGCAGAGGAAACAGTCTGA...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR GCA 90 bp AATGAAATCCCAGGGGATGCCAAATGGAGCTGGTCTCTAGAACCTTCAGGATCTGATCTTGTAGATCAATaGCATCATTTGATGGATGGG +
Preference number: 2 (lower is better)
Translates to: NEIPGDAKWSWSLEPSGSDLVDQ*HHLMDG
Trigger: CCCATCCATCAAATGATGGCATTGATCTACAAGATC...AGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGAAGAGCAGGTGGAGATaGTTCAAAGAAAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRKSRWR*FKERED
Trigger: ATCTTCTCTTTCTTTGAACCATCTCCACCTGCTCTT...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGCTCACCAAGTGTAAATaGGAAAAAGCAACACAGTCA +
Preference number: 2 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLLTKCK*EKATQS
Trigger: TGACTGTGTTGCTTTTTCCCATTTACACTTGGTGAG...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp GTAGCACATCATGTTACTCTATACGAAAGCACAGATTTAGGCACTTTATCAAAGATCACAGCAGGTGCTTaGAGGGGAGTGGAATCTCAG +
Preference number: 2 (lower is better)
Translates to: VAHHVTLYESTDLGTLSKITAGA*RGVESQ
Trigger: CTGAGATTCCACTCCCCTCCAAGCACCTGCTGTGAT...CTTTGATAAAGTGCCTAAATCTGTGCTTTCGTATAGAGTAACATGATGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CCA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACAACACCATCCTCACTATaGAAAACATCAAAATCAGAA +
Preference number: 2 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTTPSSL*KTSKSE
Trigger: TTCTGATTTTGATGTTTTCCATAGTGAGGATGGTGT...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CAA 90 bp TGCCACCTGTTTACCACCCCTGCACTGCAGCAAATTTATTATAACTaGCCACCAGCCACTGAAAGAAAATTGCTATATTTGTTGACTCAT +
Preference number: 2 (lower is better)
Translates to: CHLFTTPALQQIYYN*PPATERKLLYLLTH
Trigger: ATGAGTCAACAAATATAGCAATTTTCTTTCAGTGGCTGGTGGCAAGTTATAATAAATTTGCTGCAGTGCAGGGGTGGTAAACAGGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CCA 90 bp AAGTGGCCCTTTATTCAACAAAAGTATCATAAGAAAAGTGGCTTAGTCTCACCCAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: KWPFIQQKYHKKSGLVSPKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...GGGTGAGACTAAGCCACTTTTCTTATGATACTTTTGTTGAATAAAGGGCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR GCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTATTCTCCGCATTTCCTaGATAGATTTTGGATTTACA +
Preference number: 2 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSILRIS*IDFGFT
Trigger: TGTAAATCCAAAATCTATGCAGGAAATGCGGAGAAT...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 72 bp GTAGCTGAGCACAGAGCTCTTCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTACCTGGTGGGCGTGGGG +
Preference number: 3 (lower is better)
Translates to: VAEHRALPKGPQ*SVARRYLVGVG
Trigger: CCCCACGCCCACCAGGTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGGAAGAGCTCTGTGCTCAGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp CCACCAGGGCGTCCCAAACTCCTACCAAACTCCATGTaGTACGCTCCTCCAACCTGGGCCTGCACTGGGCCC +
Preference number: 3 (lower is better)
Translates to: PPGRPKLLPNSM*YAPPTWACTGP
Trigger: GGGCCCAGTGCAGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp ACAACAAAGCCATCACCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGCAGTTGTGCCCATCCCTaGCCTTGCCCCAAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: TTKPSPCLGGSEAQVRPCSCAHP*PCPKAG
Trigger: CCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACT...GCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCAGTTGTGCCCATCCCTaGCCTTGCCCCAAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSSCAHP*PCPKAG
Trigger: CCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACT...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACTGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNCPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp TCAGTAGCTGAGCACAGAGCTCTTCCCAAGGGGCCACAGTGCAGTGTGGCTAGGCCTCCCAGGCCCTGTTaGGCTGGAGGCCAAACACGT +
Preference number: 3 (lower is better)
Translates to: SVAEHRALPKGPQCSVARPPRPC*AGGQTR
Trigger: ACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG...CCTAGCCACACTGCACTGTGGCCCCTTGGGAAGAGCTCTGTGCTCAGCTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTGCCCACAGACAGGGCTaGGTTCAGCCACGGCATGAT +
Preference number: 3 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPAHRQG*VQPRHD
Trigger: ATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGC...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACATGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTCPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR TCA 72 bp CCCAGCTCACGGCTCACACCTGCTGGGGTCCTCTTCTaGTCACTTCTCCTGTGCAACCAGTGCAACCTGGAC +
Preference number: 3 (lower is better)
Translates to: PSSRLTPAGVLF*SLLLCNQCNLD
Trigger: GTCCAGGTTGCACTGGTTGCACAGGAGAAGTGATCAGAAGAGGACCCCAGCAGGTGTGAGCCGTGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 72 bp TCAGGGGTCTGCCCAATGAGTGGTGTGGCAGGCTTCTaGGGGCAGGGAGTGATCATCGCCTGGATTGGTCAG +
Preference number: 3 (lower is better)
Translates to: SGVCPMSGVAGF*GQGVIIAWIGQ
Trigger: CTGACCAATCCAGGCGATGATCACTCCCTGCCCTCAGAAGCCTGCCACACCACTCATTGGGCAGACCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559537.1
3UTR TCA 72 bp CTACATGGCTTGTCCAAGGCCAGGCAGCTTCGGTGGTaGAGCCTAGCACAGGCTTGCTGGCTGTGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: LHGLSKARQLRW*SLAQACWLCWK
Trigger: CTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCTGGCCTTGGACAAGCCATGTAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp TTATCCACATGTCTGTGCCTGGGCTGGGAAGACTCATaGAGCTGGGGTTGGAGCAGGTGGGCCTCCTGGGTA +
Preference number: 3 (lower is better)
Translates to: LSTCLCLGWEDS*SWGWSRWASWV
Trigger: TACCCAGGAGGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTCCCAGCCCAGGCACAGACATGTGGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 72 bp CCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACATGTCAGGCACCATCA +
Preference number: 3 (lower is better)
Translates to: PCLGGSEAQVRP*LPHTNTCQAPS
Trigger: TGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp TGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTaGCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGC +
Preference number: 3 (lower is better)
Translates to: CMAPLSTTKPSP*LGGSEAQVRPC
Trigger: GCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp TCAGAACACAGGAGAGGCTGCCCTTTCCCGAATCCCTaGACAGGCCTCTGGGCACTGCTAACTCCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: SEHRRGCPFPNP*TGLWALLTPVP
Trigger: TGGGACTGGAGTTAGCAGTGCCCAGAGGCCTGTCCAGGGATTCGGGAAAGGGCAGCCTCTCCTGTGTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 72 bp TTGGTTCAGCCACGGCATGATTCAGGGACTCGTTTATaGCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAG +
Preference number: 3 (lower is better)
Translates to: LVQPRHDSGTRL*HQGVALSPHCQ
Trigger: CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp CACCATCACCCTGCTGATGTAGGACACCTTCAGCTATaGCCTGCACTACTGAAGCACCTCCCAGCTCACGGC +
Preference number: 3 (lower is better)
Translates to: HHHPADVGHLQL*PALLKHLPAHG
Trigger: GCCGTGAGCTGGGAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 72 bp AAAAGCCCACAGACAGGGCTTGGTTCAGCCACGGCATaGTTCAGGGACTCGTTTATGCCACCAGGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: KSPQTGLGSATA*FRDSFMPPGCG
Trigger: GCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 72 bp GTCTACAACAAAGCCATCACCCTGCCTAGGTGGCAGTaGGGCTCAGGTGAGACCCTGCCTGCCCCATACAAA +
Preference number: 3 (lower is better)
Translates to: VYNKAITLPRWQ*GSGETLPAPYK
Trigger: TTTGTATGGGGCAGGCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp ATGTGTGGGAGGGAGCTCAGGATGTTCGTCACCACATaGAAAGAGCCCGTCAGCTCAGAACACAGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: MCGRELRMFVTT*KEPVSSEHRRG
Trigger: GCCTCTCCTGTGTTCTGAGCTGACGGGCTCTTTCCATGTGGTGACGAACATCCTGAGCTCCCTCCCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp ACAACAAAGCCATCACCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGCCCAAAATCTTCCAAGTaGTGCCCATCCCTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: TTKPSPCLGGSEAQVRPCPKSSK*CPSLAL
Trigger: CAAGGCAAGGGATGGGCACAACTTGGAAGATTTTGG...GCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp GGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACAACAAAGCCATCACCC +
Preference number: 3 (lower is better)
Translates to: GLLPYSLPHFLL*MAPLSTTKPSP
Trigger: GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp GTCCTACTGTGTGCCGAGCCCTGGCATGGTACGCTCTaGTTACATCCTCTCCTCTGTTTGGAGAGAGACATG +
Preference number: 3 (lower is better)
Translates to: VLLCAEPWHGTL*LHPLLCLERDM
Trigger: CATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 72 bp GATGTGGGGGCACAAATTGTTAACAGCAGCTTCCACTaGGACAAGCTACCACCGGCGGCAAGAGAGGGATAC +
Preference number: 3 (lower is better)
Translates to: DVGAQIVNSSFH*DKLPPAAREGY
Trigger: GTATCCCTCTCTTGCCGCCGGTGGTAGCTTGTCCCAGTGGAAGCTGCTGTTAACAATTTGTGCCCCCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp GGCATGATTCAGGGACTCGTTTATGCCACCAGGGTGTaGCGCTCTCTCCCCACTGTCAGACAGTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: GMIQGLVYATRV*RSLPTVRQFSS
Trigger: AGAAGAGAACTGTCTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp TCTTGCCCTCAGAGAAGGCCTCTGGTTTTCTTAACCTaGTCAGGGAAGATTCTACCTCCCCCTACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: SCPQRRPLVFLT*SGKILPPPTLP
Trigger: GGGCAGGGTAGGGGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGGGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp ATGGCATCAAAGGGAAGATACGTCTCCAGAGGCCCATaGACCAGAGTGCTGGAAAAGCTTGGGGCAGACAGG +
Preference number: 3 (lower is better)
Translates to: MASKGRYVSRGP*TRVLEKLGADR
Trigger: CCTGTCTGCCCCAAGCTTTTCCAGCACTCTGGTCCATGGGCCTCTGGAGACGTATCTTCCCTTTGATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp AGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCATCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 3 (lower is better)
Translates to: RWRVLCGFQGFRVLIWGASSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...TGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCTCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACATCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 3 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTSSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp ACCAGGGTTGAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGTGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: TRVENIQGKRYISKSYCVCPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...CACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR TCA 72 bp AGGCAGCTTCCGGCCCATCTGGGTGACACTGGACACTaGGGATCACAAAGCCAAAATCTTCCAAGTTGTGCC +
Preference number: 3 (lower is better)
Translates to: RQLPAHLGDTGH*GSQSQNLPSCA
Trigger: GGCACAACTTGGAAGATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR TCA 72 bp GGATCTAGAACCTTCAGGAGCTCCTGGATGGTTTTATaGTTTGACAGATGCTCCCCTCCGCCTTCCCGCACC +
Preference number: 3 (lower is better)
Translates to: GSRTFRSSWMVL*FDRCSPPPSRT
Trigger: GGTGCGGGAAGGCGGAGGGGAGCATCTGTCAAATCATAAAACCATCCAGGAGCTCCTGAAGGTTCTAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 72 bp CTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATaGCCCTCGGATGCTCAAGCTGTGAACTGCAAGATG +
Preference number: 3 (lower is better)
Translates to: LPRWAEYRRGFP*PSDAQAVNCKM
Trigger: CATCTTGCAGTTCACAGCTTGAGCATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp GCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAGGATCACAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: AFVGFKGSFRPI*VTLDTEDHKAK
Trigger: TTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp TTCCCGGTGGTGATAAATGCATGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGATTCCCATGCCCCTCG +
Preference number: 3 (lower is better)
Translates to: FPVVINACCLPR*AEYRRGFPCPS
Trigger: CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGCATTTATCACCACCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp TTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGGGCCATGTCCAGAACTaGCTGCGTCCTCCACATTTC +
Preference number: 3 (lower is better)
Translates to: FSEQMAFVGFKGSFRPIWGHVQN*LRPPHF
Trigger: GAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCC...CCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCGATCAATGCCATCATTaGATGGATGGGAACACTGGG +
Preference number: 3 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLDQCHH*MDGNTG
Trigger: CCCAGTGTTCCCATCCATCAAATGATGGCATTGATC...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp CTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTaGTTGGAGGGGAGTGGAATCTCAGTAGAGTTGATG +
Preference number: 3 (lower is better)
Translates to: LSDQSRPPNHSR*LEGSGISVELM
Trigger: CATCAACTCTACTGAGATTCCACTCCCCTCCAAGCACCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 72 bp GTCAGCATGACACCCATTATCATCACAAAAACTAGGTaGAGGGAGAGTCCTCAGAGAGGCTGTATGGGCGGC +
Preference number: 3 (lower is better)
Translates to: VSMTPIIITKTR*RESPQRGCMGG
Trigger: GCCGCCCATACAGCCTCTCTGAGGACTCTCCCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp GGCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTaGAGAGAGACATGTAAACGCGGTGAGCCAAGTCCA +
Preference number: 3 (lower is better)
Translates to: GMVRSAYILSSV*RETCKRGEPSP
Trigger: TGGACTTGGCTCACCGCGTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 72 bp GAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTaGCATGGTACGCTCTGCTTACATCCTCTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: EIHIEVLLCAEP*HGTLCLHPLLC
Trigger: ACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGACTTCGATATGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp CTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCACTGCAGCAAATCCAAAATCTTCCAAGTaGTGCCCATCCCTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: LEWMGKMPPVYHPCTAANPKSSK*CPSLAL
Trigger: CAAGGCAAGGGATGGGCACAACTTGGAAGATTTTGG...ATTTGCTGCAGTGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 72 bp TTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTaGCGAGCCCTGGCATGGTACGCTCTGCTTACATCC +
Preference number: 3 (lower is better)
Translates to: FKGRDTYRSPTV*RALAWYALLTS
Trigger: GGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 72 bp GACTCATCATTGCTTTTCAGAGCAAATGGCATTCGTTaGCTTCAAAGGCAGCTTCCGGCCCATCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: DSSLLFRANGIR*LQRQLPAHLGD
Trigger: GTCACCCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGCAATGATGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp TGTAGATCAATGCCATCATTTGATGGATGGGAACACTaGGCTTCAGAGAGGGGCAGGGACTTGCTGGTTGTC +
Preference number: 3 (lower is better)
Translates to: CRSMPSFDGWEH*ASERGRDLLVV
Trigger: GACAACCAGCAAGTCCCTGCCCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp AGTCTCACCCTCCTACCCAATTCCTGCTATTCAGACTaGCCAGGGGTCCTGCATCTTCTTCAACATTCTAGC +
Preference number: 3 (lower is better)
Translates to: SLTLLPNSCYSD*PGVLHLLQHSS
Trigger: GCTAGAATGTTGAAGAAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGAATTGGGTAGGAGGGTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCATGTGGGGGCACAAATaGTTAACAGCAGCTTCCACT +
Preference number: 3 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPMWGHK*LTAAST
Trigger: AGTGGAAGCTGCTGTTAACAATTTGTGCCCCCACAT...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 72 bp AGTGAAACAGTGGTTCAAACCTCACCATCACCCTGCTaGTGTAGGACACCTTCAGCTATGGCCTGCACTACT +
Preference number: 3 (lower is better)
Translates to: SETVVQTSPSPC*CRTPSAMACTT
Trigger: AGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR TCA 72 bp TGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCATaGCACCCATTATCATCACAAAAACTAGGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: CWKKPSRRDMSA*HPLSSQKLGAG
Trigger: CCCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp CCATTATGGCTATGCAGGACAGTAACCCCATCAAACTaGCCTGAGTACAACAGAAAAAGCCCACAGACAGGG +
Preference number: 3 (lower is better)
Translates to: PLWLCRTVTPSN*PEYNRKSPQTG
Trigger: CCCTGTCTGTGGGCTTTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp ATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATaGCTTGTCCAAGGCCAGGCAGCTTCGGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: ICSRKLKPREPT*LVQGQAASVVK
Trigger: CTTCACCACCGAAGCTGCCTGGCCTTGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGTCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 3 (lower is better)
Translates to: YPAPFILLTAAILLCTLLSSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACACCTCTCATAGGGCTTTaGCTCAGGAGACTCATCATT +
Preference number: 3 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTPLIGL*LRRLII
Trigger: AATGATGAGTCTCCTGAGCAAAAGCCCTATGAGAGG...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGGATCAATGCCATCATTaGATGGATGGGAACACTGGG +
Preference number: 3 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEDQCHH*MDGNTG
Trigger: CCCAGTGTTCCCATCCATCAAATGATGGCATTGATC...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDGGQTR*TRAWGL
Trigger: CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCC...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp AAGATATCATTCATATGGCTGGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCTAAGCTGTCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: KISFIWLAMSRT*CVLHISKLSGG
Trigger: GCCTCCTGACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp ATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAGCTGTCAGGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: ISFIWLAMSRTC*VLHISKLSGGC
Trigger: ACAGCCTCCTGACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp AACCTTCAGGATCTAGAACCTTCAGGAGCTCCTGGATaGTTTTATGATTTGACAGATGCTCCCCTCCGCCTT +
Preference number: 3 (lower is better)
Translates to: NLQDLEPSGAPG*FYDLTDAPLRL
Trigger: AAGGCGGAGGGGAGCATCTGTCAAATCATAAAACCATCCAGGAGCTCCTGAAGGTTCTAGATCCTGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 72 bp GGTTCTAATGAAATCCCAGGGGATGCCAAATGGAGCTaGTCTCTAGAACCTTCAGGATCTAGAACCTTCAGG +
Preference number: 3 (lower is better)
Translates to: GSNEIPGDAKWS*SLEPSGSRTFR
Trigger: CCTGAAGGTTCTAGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCTTAAGCAGTAATTCTTaGACCACAAACTGGTCATGT +
Preference number: 3 (lower is better)
Translates to: HPADVGHLQLWPALLKHLLSSNS*TTNWSC
Trigger: ACATGACCAGTTTGTGGTCAAAGAATTACTGCTTAA...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGAGGCCATGTCCAGAACTaGCTGCGTCCTCCACATTTC +
Preference number: 3 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGGHVQN*LRPPHF
Trigger: GAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCC...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp TCAAAACAGCTGCTTTATACTGGGCCATTATGGCTATaGAGGACAGTAACCCCATCAAACTGCCCTGAGTAC +
Preference number: 3 (lower is better)
Translates to: SKQLLYTGPLWL*RTVTPSNCPEY
Trigger: GTACTCAGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR GCA 72 bp AAATCTGAACACTCAAGTGTCCATCAGCAGGGACTATaGAGTGAAACAGTGGTTCAAACCTCACCATCACCC +
Preference number: 3 (lower is better)
Translates to: KSEHSSVHQQGL*SETVVQTSPSP
Trigger: GGGTGATGGTGAGGTTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp CCGCATTTCCTGCATAGATTTTGGATTTACACACCCTaGCTTCCTGGCTACAGACATCTGAGTTCACAAAGC +
Preference number: 3 (lower is better)
Translates to: PHFLHRFWIYTP*LPGYRHLSSQS
Trigger: GCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAAATGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTaGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCT +
Preference number: 3 (lower is better)
Translates to: QPNISFAHESAD*ADCFSAQLMLA
Trigger: AGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp GGAGATGGTTCAAAGAAAGAGAAGATATCATTCATATaGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: GDGSKKEKISFI*LAMSRTCCVLH
Trigger: GTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTTTGAACCATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp GTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTaGGGTGCACCATTTACTCCACACTCTTGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: VLCGFQGFRVLI*GAPFTPHSWSN
Trigger: ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp TTCTGTGGTTCTAATGAAATCCCAGGGGATGCCAAATaGAGCTGGTCTCTAGAACCTTCAGGATCTAGAACC +
Preference number: 3 (lower is better)
Translates to: FCGSNEIPGDAK*SWSLEPSGSRT
Trigger: GGTTCTAGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATTAGAACCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CCA 72 bp ATCTCATCAAAACAGCTGCTTTATACTGGGCCATTATaGCTATGCAGGACAGTAACCCCATCAAACTGCCCT +
Preference number: 3 (lower is better)
Translates to: ISSKQLLYTGPL*LCRTVTPSNCP
Trigger: AGGGCAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGTTTTGATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp CTACGTGAAACACTGTACGCAGCCTCTCCAGTATGGTaGCTTCAGGGTAGCCAATTAAGATATGGTTTTACA +
Preference number: 3 (lower is better)
Translates to: LRETLYAASPVW*LQGSQLRYGFT
Trigger: TGTAAAACCATATCTTAATTGGCTACCCTGAAGCCACCATACTGGAGAGGCTGCGTACAGTGTTTCACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGAAACAAATGAGGTTATaGAGTCGTCTGTCACACTCT +
Preference number: 3 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLKQMRL*SRLSHS
Trigger: AGAGTGTGACAGACGACTCAATAACCTCATTTGTTT...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR-3UTR CAA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATCCTCTCATAGGGCTTTaGCTCAGGAGACTCATCATT +
Preference number: 3 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDPLIGL*LRRLII
Trigger: AATGATGAGTCTCCTGAGCAAAAGCCCTATGAGAGG...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR-3UTR CAA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGATTCAATGTTCAGCCTaGCACTTTGCACAACATGTT +
Preference number: 3 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRIQCSA*HFAQHV
Trigger: AACATGTTGTGCAAAGTGCAAGGCTGAACATTGAAT...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp AAATTCATTAAAAACAGGACATTTCTCCCAGCTATTTaGGAGGCTGTGGTGGGAAGATCAATTGAGCCGGTA +
Preference number: 3 (lower is better)
Translates to: KFIKNRTFLPAI*EAVVGRSIEPV
Trigger: TACCGGCTCAATTGATCTTCCCACCACAGCCTCCCAAATAGCTGGGAGAAATGTCCTGTTTTTAATGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CCA 72 bp ATGGTTCAAAGAAAGAGAAGATATCATTCATATGGCTaGCCATGTCCAGAACTTGCTGCGTCCTCCACATTT +
Preference number: 3 (lower is better)
Translates to: MVQRKRRYHSYG*PCPELAASSTF
Trigger: AAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTTTGAACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR TCA 72 bp TCACCACATTTCTATCTGGTCTTACCTAACCAGGGTTaGGAACATTCAAGGGAAGAGATACATATCGAAGTC +
Preference number: 3 (lower is better)
Translates to: SPHFYLVLPNQG*EHSREEIHIEV
Trigger: GACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGTTAGGTAAGACCAGATAGAAATGTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR-3UTR CAA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATTTAAGCAGTAATTCTTaGACCACAAACTGGTCATGT +
Preference number: 3 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNLSSNS*TTNWSC
Trigger: ACATGACCAGTTTGTGGTCAAAGAATTACTGCTTAA...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CCA 72 bp AAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATaGAAAACATCAAAATCAGAAACCCATCATATGGGG +
Preference number: 3 (lower is better)
Translates to: KAGLLSYTPSSL*KTSKSETHHMG
Trigger: CCCCATATGATGGGTTTCTGATTTTGATGTTTTCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR GCA 72 bp TTACCACCCCTGCACTGCAGCAAATTTATTATAACTTaGCACCAGCCACTGAAAGAAAATTGCTATATTTGT +
Preference number: 3 (lower is better)
Translates to: LPPLHCSKFIIT*HQPLKENCYIC
Trigger: ACAAATATAGCAATTTTCTTTCAGTGGCTGGTGGCAAGTTATAATAAATTTGCTGCAGTGCAGGGGTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR GCA 72 bp CATTGTGGTTGCTATTCAATGTTCAGCCTTGCACTTTaGACAACATGTTATAATTATCTCACTTACTCATTA +
Preference number: 3 (lower is better)
Translates to: HCGCYSMFSLAL*TTCYNYLTYSL
Trigger: TAATGAGTAAGTGAGATAATTATAACATGTTGTGCAAAGTGCAAGGCTGAACATTGAATAGCAACCACAATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCAGGACCACGGCCTTaGGCGCCCACCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWAGPRP*APTWKP
Trigger: CGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGC...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTCCCCAGCCTCCCCGCTaGCCTTCCTGCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPPQPPR*PSCCLS
Trigger: GGAGAGGCAGCAGGAAGGCCAGCGGGGAGGCTGGGG...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGGCCCATCCCTTGCCTTaGCCCAAGGCGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRPCLAGGQTRLTRAWGLAHPLP*PKAGCP
Trigger: TGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGC...CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSRCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTAGCCGCCATTTTCGCTaGGCCGCGCAGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPSRHFR*AAQRPR
Trigger: TCTAGGGCGCTGCGCGGCGCAGCGAAAATGGCGGCT...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGAACTCCCCTCCCCGATaGGGAAGCCAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PIPCLAPRRGVHKSRWRWNSPPR*GSQAEA
Trigger: TGCTTCTGCCTGGCTTCCCCATCGGGGAGGGGAGTT...CCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CAA 72 bp GGCCAGGCAGCTTCGGTGGTGAAGCCTAGCACAGGCTaGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GQAASVVKPSTG*LAVLEEAIQEG
Trigger: TCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGAGCCGCCATTTTCGCTaGGCCGCGCAGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LALPQGGVSIRAGGDGSKSRHFR*AAQRPR
Trigger: TCTAGGGCGCTGCGCGGCGCAGCGAAAATGGCGGCT...CTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCCCCCGCTGGCCTTCCTaGTGCCTCTCCCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLPRWPS*CLSLCH
Trigger: GTGGCAGAGGGAGAGGCAGCAGGAAGGCCAGCGGGG...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGCTTCTTCCGGGGAGGTaGGGTAGACTCGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQLLPGR*GRLVGR
Trigger: ACGCCCGACGAGTCTACCCCACCTCCCCGGAAGAAG...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CCCAATGAGTGGTGTGGCAGGCTTCTGAGGGCAGGGAGTGATCATCGCCTGGATGGTGTGGCAGGCTTCTaGGGGCAGGGAGTGATCATC +
Preference number: 4 (lower is better)
Translates to: PNEWCGRLLRAGSDHRLDGVAGF*GQGVII
Trigger: GATGATCACTCCCTGCCCTCAGAAGCCTGCCACACC...ATCCAGGCGATGATCACTCCCTGCCCTCAGAAGCCTGCCACACCACTCATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR TCA 90 bp TTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGCAGCTTCGGTGGTaGAGCCTAGCACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FQVVPIPCLAPRRGVHKSRQLRW*SLAQAC
Trigger: GCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCT...GCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGTGCTTCCTCCTCCTTTaGCGGGGTACACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QALFGWRPNTFDKSMGAECFLLL*RGTPGP
Trigger: AGGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCA...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGCCCACAGCGCGTCACTaGTGCCCCATCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQPTARH*CPITGL
Trigger: AAGACCTGTGATGGGGCAGCAGTGACGCGCTGTGGG...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGGCCCATCCCTTGCCTTaGCCCAAGGCGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAEAHPLP*PKAGCP
Trigger: TGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGC...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSPKGPQ*SVARRY
Trigger: GTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGG...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGCCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: PIPCLAPRRGVHKSRWRWPHFLL*MAPLST
Trigger: TGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGG...CCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGCCTTGCGCGCCCACCTaGAAGCCGCCATTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKPCAPT*KPPFSL
Trigger: CAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGG...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TGTGGCAGGCTTCTGAGGGCAGGGAGTGATCATCGCCTGGATTGGTCAGGGAAGTCTGAGGGCAGGGAGTaGTCATCGCCTGGATTGGTC +
Preference number: 4 (lower is better)
Translates to: CGRLLRAGSDHRLDWSGKSEGRE*SSPGLV
Trigger: GACCAATCCAGGCGATGATCACTCCCTGCCCTCAGA...CTTCCCTGACCAATCCAGGCGATGATCACTCCCTGCCCTCAGAAGCCTGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR GCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAAGCCGCCATTTTCGCTaGGCCGCGCAGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMISRHFR*AAQRPR
Trigger: TCTAGGGCGCTGCGCGGCGCAGCGAAAATGGCGGCT...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCCGCTGGCCTTCCTGCTaGCTCTCCCTCTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLRWPSC*LSLCHF
Trigger: GAAGTGGCAGAGGGAGAGGCAGCAGGAAGGCCAGCG...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGCGAAGTCCTACTGTGTaGCGAGCCCTGGCATGGTAC +
Preference number: 4 (lower is better)
Translates to: PCLAGGQTRLTRAWGLRWRSPTV*RALAWY
Trigger: GTACCATGCCAGGGCTCGGCACACAGTAGGACTTCG...CCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCTGGGGTTGGAGCAGGTaGGCCTCCTGGGTATCCCTC +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLWGWSR*ASWVSL
Trigger: GAGGGATACCCAGGAGGCCCACCTGCTCCAACCCCA...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGAACTCCCCTCCCCGATaGGGAAGCCAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSNSPPR*GSQAEA
Trigger: TGCTTCTGCCTGGCTTCCCCATCGGGGAGGGGAGTT...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ACAACAAAGCCATCACCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGCGCTTGCTGGCTGTGCTaGAAGAAGCCATCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTKPSPCLGGSEAQVRPCACWLC*KKPSRR
Trigger: CCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGC...GCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTGAAGTCGACAGGTGCTaGAGGTCTCTTGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPEVDRC*RSLVLW
Trigger: CCAGAGCACAAGAGACCTTCAGCACCTGTCGACTTC...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCACAGCGCGTCACTGCTaGCCCATCACAGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLTARHC*PITGLL
Trigger: GAGAAGACCTGTGATGGGGCAGCAGTGACGCGCTGT...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGCCTTCAGCTATGGCCTaGACTACTGAAGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQPSAMA*TTEAPP
Trigger: GGGAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGG...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CTAGTGGTCTACTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCAGTTGTGCCCATCCCTTaGCTTGCCCCAAGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LVVYWNGWARCHLFTTPAVVPIP*LAPRRG
Trigger: ACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAAC...TGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAGTAGACCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp GGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGAGCCTAGCACAGGCTTaGTGGCTGTGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GGLLPYSLPHFLLCMAPLSLAQA*WLCWKK
Trigger: CTTCTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCT...CAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGAGCCTAGCACAGGCTTaGTGGCTGTGCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PCLAGGQTRLTRAWGLRWSLAQA*WLCWKK
Trigger: CTTCTTCCAGCACAGCCAGCAAGCCTGTGCTAGGCT...CCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGGATAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: CCLPRWAEYRRGFPCPSDSHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...ATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCGCTTGCTGGCTGTGCTaGAAGAAGCCATCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PISCCAWLPCLQQSHHPAACWLC*KKPSRR
Trigger: CCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGC...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CAA 72 bp CCTCCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: PPRPCLAGGQTR*TRAWGLRWEKQ
Trigger: CTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGGGTCTGATCCCACAATaGACCTCTGGACGTCATAGT +
Preference number: 4 (lower is better)
Translates to: PRPCLAGGQTRLTRAWGLGLIPQ*TSGRHS
Trigger: ACTATGACGTCCAGAGGTTCATTGTGGGATCAGACC...CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGCGACCAAAAAGTCCTTaGTCTCCCAGGCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKRPKSP*SPRRSS
Trigger: GGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCG...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLERCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGTCACCATCACCCTGCTaGTGTAGGACACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWSPSPC*CRTPSA
Trigger: AGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGA...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCGGCACCATCAGTAGCTaGGCACAGAGCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLGTISS*AQSSSQ
Trigger: TTGGGAAGAGCTCTGTGCTCAGCTACTGATGGTGCC...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGAGCCGCCATTTTCGCTaGGCCGCGCAGCGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLESRHFR*AAQRPR
Trigger: TCTAGGGCGCTGCGCGGCGCAGCGAAAATGGCGGCT...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACACATCCGGTGTGCAGTTaGCTGAGACCACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTHPVCS*LRPLPP
Trigger: GGGTGGGAGTGGTCTCAGGCAACTGCACACCGGATG...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGCTCCTGTGCAACCAGTaGAACCTGGACTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQLLCNQ*NLDCLS
Trigger: TGAAAGGCAGTCCAGGTTGCACTGGTTGCACAGGAG...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCGCCCATCCCTTGCCTTaGCCCAAGGCGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSYGWPCPELAASSTFLSAHPLP*PKAGCP
Trigger: TGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGC...GCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACA +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKAQVRP*LPHTNT
Trigger: TGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGC...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCACAAAGCCATCACCCTaGCTAGGTGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PISCCAWLPCLQQSHHPATKPSP*LGGSEA
Trigger: AGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGT...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCCCCATGCCCCTCGGATaGTCAAGCTGTGAACTGCAA +
Preference number: 4 (lower is better)
Translates to: PISCCAWLPCLQQSHHPAPMPLG*SSCELQ
Trigger: TTGCAGTTCACAGCTTGAGCATCCGAGGGGCATGGG...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGCAACATCCCTCCCCATaGCCACTTTCTCCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: QALFGWRPNTFDKSMGAEQHPSP*PLSPVC
Trigger: GCAAACTGGAGAAAGTGGGCATGGGGAGGGATGTTG...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp TCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAACCTTGCGCGCCCACCTaGAAGCCGCCATTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLTVCPISCCAWLPCLQQPCAPT*KPPFSL
Trigger: CAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGG...TTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGTCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTCACACCCTGGCTTCCTaGCTACAGACATCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPHTLAS*LQTSEF
Trigger: GAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTG...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTACGCTCCTCCAACCTaGGCCTGCACTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADYAPPT*ACTGPQ
Trigger: CTGGGGCCCAGTGCAGGCCCAGGTTGGAGGAGCGTA...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGAACTCCCCTCCCCGATaGGGAAGCCAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SMGAEVGKTGPNQTGRRENSPPR*GSQAEA
Trigger: TGCTTCTGCCTGGCTTCCCCATCGGGGAGGGGAGTT...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAAACTCCCCTCCCCGATaGGGAAGCCAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMINSPPR*GSQAEA
Trigger: TGCTTCTGCCTGGCTTCCCCATCGGGGAGGGGAGTT...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: SGETLPAPYKHMSGTISSSFRPI*VTLDTE
Trigger: CTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCT...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTCAACTCCCCTCCCCGATGGGAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: STFLSCQEAVTSTPLPDGSFRPI*VTLDTE
Trigger: CTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCT...CCCATCGGGGAGGGGAGTTGAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: SMGAEVGKTGPNQTGRRESHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGCTCAGAGAGGCTGTATaGGCGGCAGAGAAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAELREAV*AAEKLH
Trigger: GTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAG...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCCTCAGAGAGGCTGTATaGGCGGCAGAGAAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPLREAV*AAEKLH
Trigger: GTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAG...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCCCAGAGAACCTACATaGCTTGTCCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLPREPT*LVQGQA
Trigger: TGCCTGGCCTTGGACAAGCCATGTAGGTTCTCTGGG...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTCACCCTCCTACCCAATTCCTGCTATTCAGACTGGCCAGGGGTCCTGCATCTTTGCCGAGCCCTGGCATaGTACGCTCTGCTTACATCC +
Preference number: 4 (lower is better)
Translates to: LTLLPNSCYSDWPGVLHLCRALA*YALLTS
Trigger: GGATGTAAGCAGAGCGTACCATGCCAGGGCTCGGCA...AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGAATTGGGTAGGAGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCCGACCAAAAAGTCCTTaGTCTCCCAGGCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLRPKSP*SPRRSS
Trigger: GGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCG...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGTCCGGCCCATCTGGGTaGCACTGGACACTGAGGATC +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVESGPSG*HWTLRI
Trigger: GATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGA...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACGGCACCATCAGTAGCTaGGCACAGAGCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNGTISS*AQSSSQ
Trigger: TTGGGAAGAGCTCTGTGCTCAGCTACTGATGGTGCC...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp ACAGAGCTCTTCCCAAGGGGCCACAGTGCAGTGTGGCTAGGCGGTACCTGGTGGTCCTGGATGGTTTTATaGTTTGACAGATGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TELFPRGHSAVWLGGTWWSWMVL*FDRCSP
Trigger: AGGGGAGCATCTGTCAAATCATAAAACCATCCAGGA...CCACCAGGTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGGAAGAGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGTTGAAAAGGCTGCCCTaGCAGAGGCTCGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWLKRLP*QRLVIS
Trigger: GGAAATTACGAGCCTCTGGCAGGGCAGCCTTTTCAA...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp ACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATTGCTTCCTCCTCCTTTaGCGGGGTACACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVCPISCCAWLPCLQQSHCFLLL*RGTPGP
Trigger: AGGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCA...ATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGAAAGAGAAGACAGCGCGTCACTGCTaGCCCATCACAGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PQGGVSIRAGGDGSKKEKTARHC*PITGLL
Trigger: GAGAAGACCTGTGATGGGGCAGCAGTGACGCGCTGT...CTTCTCTTTCTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 4 (lower is better)
Translates to: PISCCAWLPCLQQSHHPAECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTGGGCCATTATGGCTATaGAGGACAGTAACCCCATCA +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPGPLWL*RTVTPS
Trigger: TGATGGGGTTACTGTCCTGCATAGCCATAATGGCCC...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTGAAGTGGGGGCACACTaGACAGGAAACAATGAGACA +
Preference number: 4 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPEVGAH*TGNNET
Trigger: TGTCTCATTGTTTCCTGTGCAGTGTGCCCCCACTTC...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: GGLLPYSLPHFLLCMAPLAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...CAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp ACAACAAAGCCATCACCCTGCCTAGGTGGCAGTGAGGCTCAGGTGAGACCCTGCGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: TTKPSPCLGGSEAQVRPCAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...GCAGGGTCTCACCTGAGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGPKGPQ*SVARRY
Trigger: GTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGG...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACACAAAGCCATCACCCTaGCTAGGTGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNTKPSP*LGGSEA
Trigger: AGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGT...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCAGACGTGGATTCCCATaGCCCTCGGATGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPRRGFP*PSDAQA
Trigger: AGCTTGAGCATCCGAGGGGCATGGGAATCCACGTCT...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCCCCGGTGGTGATAAATaGATGTTGCCTGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSPGGDK*MLPAKM
Trigger: CATCTTGGCAGGCAACATGCATTTATCACCACCGGG...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATGCCCATGGACCAGAGTaGTGGAAAAGCTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHAHGPE*WKSLGQ
Trigger: CTGCCCCAAGCTTTTCCAGCACTCTGGTCCATGGGC...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp TGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGGATTTGCCGGGGTACACCTaGCCCTCCAGAGTTACATCA +
Preference number: 4 (lower is better)
Translates to: CCLPRWAEYRRGFPCPSDLPGYT*PSRVTS
Trigger: TGATGTAACTCTGGAGGGCCAGGTGTACCCCGGCAA...ATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCTATGCCACCAGGGTGTaGCGCTCTCTCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPYATRV*RSLPTV
Trigger: GACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATA...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGTTTCTCCCAGCTATTTaGGAGGCTGTGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQFLPAI*EAVVGR
Trigger: TCTTCCCACCACAGCCTCCCAAATAGCTGGGAGAAA...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKRSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTCAACTCCCCTCCCCGATGGGGTCTCCAGAGGCCCATaGACCAGAGTGCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: STFLSCQEAVTSTPLPDGVSRGP*TRVLEK
Trigger: CTTTTCCAGCACTCTGGTCCATGGGCCTCTGGAGAC...CCCATCGGGGAGGGGAGTTGAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAGCCAAGTCCAGGCTTaGAGAAGGCTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTSQVQA*RRLWAP
Trigger: TGGTGCCCACAGCCTTCTCCAAGCCTGGACTTGGCT...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp TTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAGAAGTCGACAGGTGCTaGAGGTCTCTTGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FGWRPNTFDKSMGAEVGKEVDRC*RSLVLW
Trigger: CCAGAGCACAAGAGACCTTCAGCACCTGTCGACTTC...TTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCCGTCATAGTTGGCATTaGAAAGGCTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SGETLPAPYKHMSGTISSRHSWH*KGCPAR
Trigger: TCTGGCAGGGCAGCCTTTTCAATGCCAACTATGACG...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGGTGACACTGGACACTaGGGATCACAAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PCLAGGQTRLTRAWGLRWGDTGH*GSQSQN
Trigger: ATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACC...CCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCCAGGGGTCTGCCCAATaGGTGGTGTGGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGQGSAQ*VVWQAS
Trigger: AGAAGCCTGCCACACCACTCATTGGGCAGACCCCTG...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR TCA 90 bp GAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTGATGGTTTTATGATTTaGCAGATGCTCCCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EVSSLTVCPISCCAWLPCDGFMI*QMLPSA
Trigger: GGCGGAGGGGAGCATCTGTCAAATCATAAAACCATC...ACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGTTGAAAAGGCTGCCCTaGCAGAGGCTCGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSLKRLP*QRLVIS
Trigger: GGAAATTACGAGCCTCTGGCAGGGCAGCCTTTTCAA...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTTGAAAAGGCTGCCCTaGCAGAGGCTCGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: PISCCAWLPCLQQSHHPALKRLP*QRLVIS
Trigger: GGAAATTACGAGCCTCTGGCAGGGCAGCCTTTTCAA...GGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCACAGCGCGTCACTGCTaGCCCATCACAGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPTARHC*PITGLL
Trigger: GAGAAGACCTGTGATGGGGCAGCAGTGACGCGCTGT...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACACATCCGGTGTGCAGTTaGCTGAGACCACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTHPVCS*LRPLPP
Trigger: GGGTGGGAGTGGTCTCAGGCAACTGCACACCGGATG...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGAGAGGGGTTGTGCCCATCCCTTaGCTTGCCCCAAGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LVDQCHHLMDGNTGLQRGVVPIP*LAPRRG
Trigger: ACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAAC...CCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATCCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHPHFLL*MAPLST
Trigger: TGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGG...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAGACGTGGATTCCCATaGCCCTCGGATGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPYSLPHFLLCMAPLSTTRRGFP*PSDAQA
Trigger: AGCTTGAGCATCCGAGGGGCATGGGAATCCACGTCT...TGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGCCCGGTGGTGATAAATaGATGTTGCCTGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSPGGDK*MLPAKM
Trigger: CATCTTGGCAGGCAACATGCATTTATCACCACCGGG...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAACCAGAGAAGGCAAATaGCTGGCATGGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AEVGKTGPNQTGRREAGTTREGK*LAWRVL
Trigger: CAGCACCCTCCATGCCAGGCATTTGCCTTCTCTGGT...TGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTCCTTGCGCGCCCACCTaGAAGCCGCCATTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFPCAPT*KPPFSL
Trigger: CAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGG...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCTCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGACACAGGCCTCACCCTaGAGAGGGCATGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLTQASP*RGHGLE
Trigger: CTCCAGGCCATGCCCTCTCCAGGGTGAGGCCTGTGT...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp ATCTGCAGACTGGGCAGACTGTTTCTCAGCTCAGCTTATGTTGGCTCCCCTCAGGCAACCAGTGCAACCTaGACTGCCTTTCACACCCAC +
Preference number: 4 (lower is better)
Translates to: ICRLGRLFLSSAYVGSPQATSAT*TAFHTH
Trigger: GTGGGTGTGAAAGGCAGTCCAGGTTGCACTGGTTGC...CTGAGGGGAGCCAACATAAGCTGAGCTGAGAAACAGTCTGCCCAGTCTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACGAAGACTCATGCAGCTaGGGTTGGAGCAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADEDSCS*GWSRWA
Trigger: GGCCCACCTGCTCCAACCCCAGCTGCATGAGTCTTC...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCAGCCACCTGAGTAGCTaGGATTACAGGCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPSHLSS*DYRPAP
Trigger: TGGTGCGGGCCTGTAATCCCAGCTACTCAGGTGGCT...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: FLLCMAPLSTTKPSPCLGAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTGCAAATGGCATTCGTTaGCTTCAAAGGCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: EVSSLTVCPISCCAWLPCANGIR*LQRQLP
Trigger: CGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGC...ACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGCCATCATTTGATGGATaGGAACACTGGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QALFGWRPNTFDKSMGAEPSFDG*EHWASE
Trigger: CTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGG...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCTGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLCCLPR*AEYRRG
Trigger: TCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGGTCTGCCCAATGAGTaGTGTGGCAGGCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGKTGPNQTGRREAGTGRGLPNE*CGRLLR
Trigger: CCTCAGAAGCCTGCCACACCACTCATTGGGCAGACC...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR CCA 90 bp AGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACTGTGTGCCGAGCCCTaGCATGGTACGCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SLPHFLLCMAPLSTTKPSLCAEP*HGTLCL
Trigger: TAAGCAGAGCGTACCATGCCAGGGCTCGGCACACAG...TGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CAA 72 bp CTAGAACCTTCAGGAGCTCCTGGATGGTTTTATGATTaGACAGATGCTCCCCTCCGCCTTCCCGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LEPSGAPGWFYD*TDAPLRLPAPP
Trigger: AGGAGGTGCGGGAAGGCGGAGGGGAGCATCTGTCAAATCATAAAACCATCCAGGAGCTCCTGAAGGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGAAGTCGACAGGTGCTaGAGGTCTCTTGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGKTGPNQTGRREAGTGREVDRC*RSLVLW
Trigger: CCAGAGCACAAGAGACCTTCAGCACCTGTCGACTTC...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGCGACCAAAAAGTCCTTaGTCTCCCAGGCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVERPKSP*SPRRSS
Trigger: GGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCG...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCTCAGCACACCTGTCTTaGCCGACCAAAAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HPADVGHLQLWPALLKHLSAHLS*PTKKSL
Trigger: CAAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGA...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTCAGCACACCTGTCTTaGCCGACCAAAAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPSAHLS*PTKKSL
Trigger: CAAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGA...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGTCAGCACACCTGTCTTaGCCGACCAAAAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAESAHLS*PTKKSL
Trigger: CAAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGA...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGAGACCACATAAAACCTaGCAGACACCAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWRPHKT*QTPRVL
Trigger: GAGAACTCTTGGTGTCTGTCAGGTTTTATGTGGTCT...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGCTTTCGAGGGAAATGTaGGCAGCTACCAAATTAAGG +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWLSREM*AATKLR
Trigger: CCTTAATTTGGTAGCTGCTCACATTTCCCTCGAAAG...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGCATTTCTTTTGCTCATaGATCTGCAGACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWHFFCS*ICRLGR
Trigger: TCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATG...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCAGGGACATGTCAGCATaGCACCCATTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSRDMSA*HPLSSQ
Trigger: TTGTGATGATAATGGGTGTCATGCTGACATGTCCCT...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTTCATCTTTCTCCCATTaGTCCAGAAGACGCGCCATG +
Preference number: 4 (lower is better)
Translates to: PFPAVHGSPVYNKAITLPSSFSH*SRRRAM
Trigger: CATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGA...AGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTCCCACAGCGCGTCACTaGTGCCCCATCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ENIQGKRYISKSYCVPSPPTARH*CPITGL
Trigger: AAGACCTGTGATGGGGCAGCAGTGACGCGCTGTGGG...AGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CTAGTGGTCTACTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCAGAATGTCATCCGGTGTaGAGTTGCCTGAGACCACTC +
Preference number: 4 (lower is better)
Translates to: LVVYWNGWARCHLFTTPAECHPV*SCLRPL
Trigger: GAGTGGTCTCAGGCAACTGCACACCGGATGACATTC...TGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAGTAGACCACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACCTCACGGCTCACACCTaGTGGGGTCCTCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADLTAHT*WGPLLI
Trigger: GATCAGAAGAGGACCCCAGCAGGTGTGAGCCGTGAG...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTACTGATCTTGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLLILAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCAG...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCGCCATGTCCAGAACTTaGTGCGTCCTCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: SGETLPAPYKHMSGTISSAMSRT*CVLHIS
Trigger: AGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGC...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTCCCAAGGGGCCACAGTaGAGTGTGGCTAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: KISFIWLAMSRTCCVLHIPKGPQ*SVARRY
Trigger: GTACCGCCTAGCCACACTGCACTGTGGCCCCTTGGG...AATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGACCCCATTTCCTGCTGTaGATGGCTCCCCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: VGKTGPNQTGRREAGTGRPHFLL*MAPLST
Trigger: TGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGG...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGCACAGGCTTGCTGGCTGTGCTGGAAGAAGCCATCCAGGAGGGACATGTCAGCAGTTCTAATCTGGGGTaGACCATTTACTCCACACTC +
Preference number: 4 (lower is better)
Translates to: STGLLAVLEEAIQEGHVSSSNLG*TIYSTL
Trigger: GAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACT...GCTGACATGTCCCTCCTGGATGGCTTCTTCCAGCACAGCCAGCAAGCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCGCTCAAGCTGTGAACTaGAAGATGGAGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGETLPAPYKHMSGTISSAQAVN*KMESAV
Trigger: CACAGCACTCTCCATCTTGCAGTTCACAGCTTGAGC...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCGTGTTGGCCTCCCATTaGTCCAGAAGACGCGCCATG +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIVLASH*SRRRAM
Trigger: CATGGCGCGTCTTCTGGAGCAATGGGAGGCCAACAC...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR GCA 90 bp AGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCAGAACACAGGAGAGGCTaGCCTTTCCCGAATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RWRVLCGFQGFRVLIWGAEHRRG*PFPNPW
Trigger: CCAGGGATTCGGGAAAGGGCAGCCTCTCCTGTGTTC...TGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHRSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAACAGGCCCTGTTTGGCTaGAGGCCAAACACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SLTVCPISCCAWLPCLQQQALFG*RPNTFD
Trigger: GTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG...TTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGAGACATGTAAACAGCCATGGAACGGGGTaGGGCAGCCGTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: AWYALLTSSPLFGERHVNSHGTG*GSRPLI
Trigger: TATGAGAGGACGGCTGCCCCACCCCGTTCCATGGCT...GTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATACATGGACCAGAGTGCTaGAAAAGCTTGGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMIHGPEC*KSLGQT
Trigger: TGTCTGCCCCAAGCTTTTCCAGCACTCTGGTCCATG...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp GCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGAGACATGTAAACCCTTTCCCGAATCCCTaGACAGGCCTCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: AWYALLTSSPLFGERHVNPFPNP*TGLWAL
Trigger: CAGTGCCCAGAGGCCTGTCCAGGGATTCGGGAAAGG...GTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CAA 72 bp GCCCTGAGTACAACAGAAAAAGCCCACAGACAGGGCTaGGTTCAGCCACGGCATGATTCAGGGACTCGTTTA +
Preference number: 4 (lower is better)
Translates to: ALSTTEKAHRQG*VQPRHDSGTRL
Trigger: TAAACGAGTCCCTGAATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGCTTTTTCTGTTGTACTCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCGGCACCATCAGTAGCTaGGCACAGAGCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HSYGWPCPELAASSTFLSGTISS*AQSSSQ
Trigger: TTGGGAAGAGCTCTGTGCTCAGCTACTGATGGTGCC...GCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCGTCAGGGAAGGTCAGTaGGTGGAAGTAGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIVREGQ*VEVGQV
Trigger: CACCTGTCCTACTTCCACTCACTGACCTTCCCTGAC...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR TCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACTTTCCAGCCCAGTCCTaGAATCATTTTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNFPAQS*NHFGAS
Trigger: AGAGGCTCCAAAATGATTTCAGGACTGGGCTGGAAA...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTCCCACAGCGCGTCACTaGTGCCCCATCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KISFIWLAMSRTCCVLHIPTARH*CPITGL
Trigger: AAGACCTGTGATGGGGCAGCAGTGACGCGCTGTGGG...AATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGTTAAGGGGAAACAGATaGTGTGAGGCCAAAACAAAC +
Preference number: 4 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQLRGNR*CEAKTN
Trigger: GTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAA...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATGTTGTGCCCATCCCTTaGCTTGCCCCAAGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNVVPIP*LAPRRG
Trigger: ACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAAC...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCGCTCAGGTGAGACCCTaGCTGCCCCATACAAACACA +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGAQVRP*LPHTNT
Trigger: TGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGAGC...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTACAAAGCCATCACCCTaGCTAGGTGGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SYGWPCPELAASSTFLSCTKPSP*LGGSEA
Trigger: AGCCTCACTGCCACCTAGGCAGGGTGATGGCTTTGT...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGCCCATGCCCCTCGGATaGTCAAGCTGTGAACTGCAA +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLEPMPLG*SSCELQ
Trigger: TTGCAGTTCACAGCTTGAGCATCCGAGGGGCATGGG...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATTGGCATGGTACGCTCTaGTTACATCCTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHWHGTL*LHPLLC
Trigger: ACAGAGGAGAGGATGTAAGCAGAGCGTACCATGCCA...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCATCACAGCAGGTGCTTaGAGGGGAGTGGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPITAGA*RGVESQ
Trigger: CTGAGATTCCACTCCCCTCCAAGCACCTGCTGTGAT...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGAACCTGGGCCTGCACTaGGCCCCAGCCTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKNLGLH*APASPL
Trigger: CAGCGGGGAGGCTGGGGCCCAGTGCAGGCCCAGGTT...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AFQSKWHSLASKAASGPSRSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...AGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGGCATGGGGGCTGAGGTaGGAAAAACAGGTCCAAATC +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVEAWGLR*EKQVQI
Trigger: GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGC...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGCAGGCCCTGTTTGGCTaGAGGCCAAACACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLEQALFG*RPNTFD
Trigger: GTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GAAGGCAAATGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTTGAGAACACAGGCCCTGTTTGGCTaGAGGCCAAACACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: EGKCLAWRVLSSFAELRTQALFG*RPNTFD
Trigger: GTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG...TGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCATTTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCCCATCATTTGATGGATaGGAACACTGGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPPSFDG*EHWASE
Trigger: CTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGG...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGGATCATCGCCTGGATTaGTCAGGGAAGGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVEDHRLD*SGKVSE
Trigger: CTCACTGACCTTCCCTGACCAATCCAGGCGATGATC...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR CCA 90 bp TTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAATGTTCGTCACCACATaGAAAGAGCCCGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FGWRPNTFDKSMGAEVGKMFVTT*KEPVSS
Trigger: TGAGCTGACGGGCTCTTTCCATGTGGTGACGAACAT...TTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp AATGAAATCCCAGGGGATGCCAAATGGAGCTGGTCTCTAGAACCTTCAGGATCTTGTGGGCACCAACTGTaGCCAGATGTGTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NEIPGDAKWSWSLEPSGSCGHQL*PDVWEG
Trigger: TCCCTCCCACACATCTGGCCACAGTTGGTGCCCACA...AGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACCGTCATAGTTGGCATTaGAAAGGCTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADRHSWH*KGCPAR
Trigger: TCTGGCAGGGCAGCCTTTTCAATGCCAACTATGACG...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGGGTCTGATCCCACAATaGACCTCTGGACGTCATAGT +
Preference number: 4 (lower is better)
Translates to: FSEQMAFVGFKGSFRPIWGLIPQ*TSGRHS
Trigger: ACTATGACGTCCAGAGGTTCATTGTGGGATCAGACC...CCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTAACAGAAACTACTGGGTaGAGTGGGGGCACACTGCAC +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLTETTG*SGGTLH
Trigger: GTGCAGTGTGCCCCCACTTCACCCAGTAGTTTCTGT...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGCCGAAATATTTTGTATaGAAATGTCCACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWPKYFV*KCPLQH
Trigger: GTGCTGCAGTGGACATTTTCATACAAAATATTTCGG...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAGGTGACACTGGACACTaGGGATCACAAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMIGDTGH*GSQSQN
Trigger: ATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACC...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTCAACTCCCCTCCCCGATGGGCTTCAACATTCTAGCTaGTGCCTAGCGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: STFLSCQEAVTSTPLPDGLQHSS*CLAFVQ
Trigger: CTGTACAAACGCTAGGCATCAGCTAGAATGTTGAAG...CCCATCGGGGAGGGGAGTTGAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGAAGGAGATCTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGGGGTCTCCCATTaGTCCAGAAGACGCGCCATG +
Preference number: 4 (lower is better)
Translates to: GRRSCRSMPSFDGWEHWASGVSH*SRRRAM
Trigger: CATGGCGCGTCTTCTGGAGCAATGGGAGACCCCTGA...AGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422879.3
CDS-3UTR GCA 90 bp AGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCAAAATCTTCCAAGTTGTaGCCATCCCTTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLPHFLLCMAPLSTTKPSKSSKL*PSLALP
Trigger: GGGCAAGGCAAGGGATGGGCACAACTTGGAAGATTT...TGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTAGACGTGGATTCCCATaGCCCTCGGATGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ENIQGKRYISKSYCVPSPRRGFP*PSDAQA
Trigger: AGCTTGAGCATCCGAGGGGCATGGGAATCCACGTCT...AGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CTCACCCTCCTACCCAATTCCTGCTATTCAGACTGGCCAGGGGTCCTGCATCTTAACAGCCAAGCCACTTaGTTAAGGTTAGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: LTLLPNSCYSDWPGVLHLNSQAT*LRLGLG
Trigger: TCCAAGTCCTAACCTTAAGCAAGTGGCTTGGCTGTT...AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGAATTGGGTAGGAGGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGGCTGAGTTGAGAACATaGTTTGTACTAAACGTGGGT +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKAELRT*FVLNVG
Trigger: ACCCACGTTTAGTACAAAGCATGTTCTCAACTCAGC...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGGCCTGGCATGGAGGGTaGTGTCATCTTTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLEAWHGG*CHLLLS
Trigger: ACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGC...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp CTTGCTGGTTGTCCTAGGGGCAGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCAGGTCTCTTGTGCTCTaGAAGATCTCCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LAGCPRGSSKVGRFLGGLRSLVL*KISFFN
Trigger: ATTGAAGAAGGAGATCTTCCAGAGCACAAGAGACCT...GAGACCTCCTAGGAACCTGCCTACCTTTGAGCTGCCCCTAGGACAACCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGAGGTCTCTTGTGCTCTaGAAGATCTCCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSRSLVL*KISFFN
Trigger: ATTGAAGAAGGAGATCTTCCAGAGCACAAGAGACCT...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAACAGCAGCTTCCACTaGGACAAGCTACCACCGGCG +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLNSSFH*DKLPPA
Trigger: CGCCGGTGGTAGCTTGTCCCAGTGGAAGCTGCTGTT...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACGGACACCTTCAGCTATaGCCTGCACTACTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADGHLQL*PALLKH
Trigger: GTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCC...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATAAGCAGGTGGGCCTCCTaGGTATCCCTCTCTCTACGT +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSISRWAS*VSLSLR
Trigger: ACGTAGAGAGAGGGATACCCAGGAGGCCCACCTGCT...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp ACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACAGGCCCTGTTTGGCTaGAGGCCAAACACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TRLTRAWGLRWEKQVQIKQALFG*RPNTFD
Trigger: GTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG...TTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCGGAGTGATCATCGCCTaGATTGGTCAGGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGGVIIA*IGQGRS
Trigger: TGACCTTCCCTGACCAATCCAGGCGATGATCACTCC...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR CCA 90 bp GAGAAGGCTGTGGGCACCAACTGTGGCCAGATGTGTGGGAGGGAGCTCAGGATGCTTAAGGTTAGGACTTaGATCCTAATCTTCCTAACT +
Preference number: 4 (lower is better)
Translates to: EKAVGTNCGQMCGRELRMLKVRT*ILIFLT
Trigger: AGTTAGGAAGATTAGGATCCAAGTCCTAACCTTAAG...CATCCTGAGCTCCCTCCCACACATCTGGCCACAGTTGGTGCCCACAGCCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTCGTCATAGTTGGCATTaGAAAGGCTGCCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFRHSWH*KGCPAR
Trigger: TCTGGCAGGGCAGCCTTTTCAATGCCAACTATGACG...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTAGGTTCAGCCACGGCATaGTTCAGGGACTCGTTTATG +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLGSATA*FRDSFM
Trigger: CATAAACGAGTCCCTGAATCATGCCGTGGCTGAACC...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCAGCTGGGGTCCTCTTCTaGTCACTTCTCCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: QPNISFAHESADWADCFSAGVLF*SLLLCN
Trigger: GTTGCACAGGAGAAGTGATCAGAAGAGGACCCCAGC...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TACTCCACACTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCATCCGGCCCATCTGGGTaGCACTGGACACTGAGGATC +
Preference number: 4 (lower is better)
Translates to: YSTLLVKFLHLSELFLEPSGPSG*HWTLRI
Trigger: GATCCTCAGTGTCCAGTGTCACCCAGATGGGCCGGA...TGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGCTGATGTATGTAAGGTaGCCTAAGTTGAATGGCACT +
Preference number: 4 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAELMYVR*PKLNGT
Trigger: AGTGCCATTCAACTTAGGTCACCTTACATACATCAG...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACCTGATGTATGTAAGGTaGCCTAAGTTGAATGGCACT +
Preference number: 4 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNLMYVR*PKLNGT
Trigger: AGTGCCATTCAACTTAGGTCACCTTACATACATCAG...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGGCAGCTTCGGTGGTaGAGCCTAGCACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDRQLRW*SLAQAC
Trigger: GCAAGCCTGTGCTAGGCTTCACCACCGAAGCTGCCT...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATACCCAATCACAGCAGGTaGTTGGAGGGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSIPNHSR*LEGSGI
Trigger: GATTCCACTCCCCTCCAAGCACCTGCTGTGATTGGG...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGCTACCAAACTCCATGTaGTACGCTCCTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLLPNSM*YAPPTW
Trigger: CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAG...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTGCTCAAGCTGTGAACTaGAAGATGGAGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SYGWPCPELAASSTFLSCAQAVN*KMESAV
Trigger: CACAGCACTCTCCATCTTGCAGTTCACAGCTTGAGC...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCCCCGGTGGTGATAAATaGATGTTGCCTGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIPGGDK*MLPAKM
Trigger: CATCTTGGCAGGCAACATGCATTTATCACCACCGGG...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGAAAAATCAGAAGCAATaGAAACCCTTCAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LALPQGGVSIRAGGDGSKKNQKQ*KPFKPA
Trigger: GGCTGGTTTGAAGGGTTTGCATTGCTTCTGATTTTT...CTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCAACTGGCCAGGGGTCCTaGATCTTCTTCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: SLPHFLLCMAPLSTTKPSTGQGS*IFFNIL
Trigger: TAGAATGTTGAAGAAGATGCAGGACCCCTGGCCAGT...TGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGACTCCAGTCCCACCATaGACAAACCAACATCCCTCC +
Preference number: 4 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRTPVPP*TNQHPS
Trigger: GGAGGGATGTTGGTTTGTGCATGGTGGGACTGGAGT...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCTGGATTTACACACCCTaGCTTCCTGGCTACAGACAT +
Preference number: 4 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPWIYTP*LPGYRH
Trigger: ATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAACCCACAGACAGGGCTTaGTTCAGCCACGGCATGATT +
Preference number: 4 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKPTDRA*FSHGMI
Trigger: AATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGG...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp ACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAAAGGTCCAAATCAAACTaGCAGACGAGAGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TRLTRAWGLRWEKQVQIKRSKSN*QTRGRH
Trigger: GTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCT...TTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ACCAGGGTTGAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGAGCTTCCGGCCCATCTaGGTGACACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: TRVENIQGKRYISKSYCVSFRPI*VTLDTE
Trigger: CTCAGTGTCCAGTGTCACCCAGATGGGCCGGAAGCT...CACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGGCAAATGGCATTCGTTaGCTTCAAAGGCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLEANGIR*LQRQLP
Trigger: CGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGC...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGCAGAAACCCATCATATaGGGCAATGAGAAAAATCAG +
Preference number: 4 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSQKPII*GNEKNQ
Trigger: CTGATTTTTCTCATTGCCCCATATGATGGGTTTCTG...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATAGTGCTGGAAAAGCTTaGGGCAGACAGGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EDIIHMAGHVQNLLRPPHSAGKA*GRQGSQ
Trigger: TTGAGACCCCTGTCTGCCCCAAGCTTTTCCAGCACT...ATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CAA 72 bp AGTGGGGAAGGAGATCTTGTAGATCAATGCCATCATTaGATGGATGGGAACACTGGGCTTCAGAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGEGDLVDQCHH*MDGNTGLQRGA
Trigger: TGCCCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp GCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTCTCAGTAGGGCTTCCTaGTACAGTGACAAACATCAT +
Preference number: 4 (lower is better)
Translates to: AFQSKWHSLASKAASGPSLSRAS*YSDKHH
Trigger: ATGATGTTTGTCACTGTATCAGGAAGCCCTACTGAG...AGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATACTGGTCTCAAACTCCTaGCCTCAACTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSILVSNS*PQLIHP
Trigger: TGGGTGGATCAGTTGAGGTCAGGAGTTTGAGACCAG...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCGGTGACACTGGACACTaGGGATCACAAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: HSYGWPCPELAASSTFLSGDTGH*GSQSQN
Trigger: ATTTTGGCTTTGTGATCCTCAGTGTCCAGTGTCACC...GCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp CTAGTGGTCTACTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCACTGATGTATGTAAGGTaGCCTAAGTTGAATGGCACT +
Preference number: 4 (lower is better)
Translates to: LVVYWNGWARCHLFTTPALMYVR*PKLNGT
Trigger: AGTGCCATTCAACTTAGGTCACCTTACATACATCAG...TGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAGTAGACCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp TGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGGATCTTGCCACCAGCCACTaGAAGAAAATTGCTATATTT +
Preference number: 4 (lower is better)
Translates to: CCLPRWAEYRRGFPCPSDLATSH*KKIAIF
Trigger: AAATATAGCAATTTTCTTTCAGTGGCTGGTGGCAAG...ATCCGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp CTAGTGGTCTACTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCAGCTGTCATCTTTTGCTaGGTTGAGAACATGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVVYWNGWARCHLFTTPAAVIFC*VENMLC
Trigger: ACAAAGCATGTTCTCAACTCAGCAAAAGATGACAGC...TGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAGTAGACCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGTCATCTTTCTCCCATTaGTCCAGAAGACGCGCCATG +
Preference number: 4 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRSSFSH*SRRRAM
Trigger: CATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGA...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCCACATTTCTAAGCTGTCAGGAGGCTGTCACTTCAACTCCCCTCCCCGATGGGTCGTCATTTTCAATATaGTTTCAGGCTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: STFLSCQEAVTSTPLPDGSSFSI*FQACLG
Trigger: ACCCAAGCAAGCCTGAAAGCATATTGAAAATGACGA...CCCATCGGGGAGGGGAGTTGAAGTGACAGCCTCCTGACAGCTTAGAAATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTATTATCCACATGTCTGTaGCTGGGCTGGGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLLSTCL*LGWEDS
Trigger: TGAGTCTTCCCAGCCCAGGCACAGACATGTGGATAA...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGAGTTCTAATCTGGGGTaGACCATTTACTCCACACTC +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVESSNLG*TIYSTL
Trigger: GAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACT...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATCCCATGCCCCTCGGATaGTCAAGCTGTGAACTGCAA +
Preference number: 4 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNPMPLG*SSCELQ
Trigger: TTGCAGTTCACAGCTTGAGCATCCGAGGGGCATGGG...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGACTGGCCAGGGGTCCTaGATCTTCTTCAACATTCTA +
Preference number: 4 (lower is better)
Translates to: LHLSELFLEPQSDRVGKETGQGS*IFFNIL
Trigger: TAGAATGTTGAAGAAGATGCAGGACCCCTGGCCAGT...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGCCTTGCGCGCCCACCTaGAAGCCGCCATTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKPCAPT*KPPFSL
Trigger: CAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGG...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCATCCCACCCCAGGAGCTaGGCAAAGAGCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPSHPRS*AKSSPR
Trigger: ACGTGGAGAGCTCTTTGCCCAGCTCCTGGGGTGGGA...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCAAACTACTGGGTGAAGTaGGGGCACACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: QPNISFAHESADWADCFSNYWVK*GHTAQE
Trigger: TTCCTGTGCAGTGTGCCCCCACTTCACCCAGTAGTT...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACCATGAATCTGCAGACTaGGCAGACTGTTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADHESAD*ADCFSA
Trigger: AGCTGAGAAACAGTCTGCCCAGTCTGCAGATTCATG...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGAAAGAGAAGGCTTTTCAGAGCAAATaGCATTCGTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PQGGVSIRAGGDGSKKEKAFQSK*HSLASK
Trigger: CTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC...CTTCTCTTTCTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCTTTTCAGAGCAAATaGCATTCGTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SMGAEVGKTGPNQTGRREAFQSK*HSLASK
Trigger: CTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCCCATCATTTGATGGATaGGAACACTGGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGPSFDG*EHWASE
Trigger: CTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGG...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGTTTACTCCACACTCTTaGTCAAATTTCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKFTPHS*SNFFTS
Trigger: AGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTAAA...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
3UTR CAA 72 bp TGCCTGGCATGGAGGGTGCTGTCATCTTTTGCTGAGTaGAGAACATGCTTTGTACTAAACGTGGGTACAACC +
Preference number: 4 (lower is better)
Translates to: CLAWRVLSSFAE*RTCFVLNVGTT
Trigger: GGTTGTACCCACGTTTAGTACAAAGCATGTTCTCAACTCAGCAAAAGATGACAGCACCCTCCATGCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGGGTCTGATCCCACAATaGACCTCTGGACGTCATAGT +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLGLIPQ*TSGRHS
Trigger: ACTATGACGTCCAGAGGTTCATTGTGGGATCAGACC...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTCGGTGTGCAGTTGCCTaGGACCACTCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSRCAVA*DHSHPR
Trigger: CCTGGGGTGGGAGTGGTCTCAGGCAACTGCACACCG...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCAAGGTACAGGGCGGAGTaGAAGCTTTGCTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: QPNISFAHESADWADCFSRYRAE*KLCYLL
Trigger: CAAAAGGTAGCAAAGCTTTCACTCCGCCCTGTACCT...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGTATGGCCTGCACTACTaGAGCACCTCCCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLYGLHY*STSQLT
Trigger: CGTGAGCTGGGAGGTGCTTCAGTAGTGCAGGCCATA...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATAGCAGGGACTATGCAGTaGAACAGTGGTTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSIAGTMQ*NSGSNL
Trigger: GAGGTTTGAACCACTGTTTCACTGCATAGTCCCTGC...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp GCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGAGACATGTAAACTTTCCAGCCCAGTCCTaGAATCATTTTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AWYALLTSSPLFGERHVNFPAQS*NHFGAS
Trigger: AGAGGCTCCAAAATGATTTCAGGACTGGGCTGGAAA...GTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAGGGACATGTCAGCATaGCACCCATTATCATCACAA +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIRDMSA*HPLSSQ
Trigger: TTGTGATGATAATGGGTGTCATGCTGACATGTCCCT...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGTCATCTTTCTCCCATTaGTCCAGAAGACGCGCCATG +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLSSFSH*SRRRAM
Trigger: CATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGA...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAATATGCTTTCAGGCTTaGTTGGGTCTATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FGWRPNTFDKSMGAEVGKICFQA*LGLSLR
Trigger: TCTCAAAGATAGACCCAAGCAAGCCTGAAAGCATAT...TTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTGGAATGGATGGGCAAGATGCCACCTGTTTACCACCCCTGCACTGCAGCAAATTCGTCATTTTCAATATaGTTTCAGGCTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LEWMGKMPPVYHPCTAANSSFSI*FQACLG
Trigger: ACCCAAGCAAGCCTGAAAGCATATTGAAAATGACGA...ATTTGCTGCAGTGCAGGGGTGGTAAACAGGTGGCATCTTGCCCATCCATTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGTGCTTCCTCCTCCTTTaGCGGGGTACACCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKCFLLL*RGTPGP
Trigger: AGGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCA...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGTACCTCCCCCTACCCTaGCCCTTTCATACTTCTAAC +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLYLPLP*PFHTSN
Trigger: GTTAGAAGTATGAAAGGGGCAGGGTAGGGGGAGGTA...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGMSRTC*VLHISK
Trigger: CTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACAT...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGAGTTCTAATCTGGGGTaGACCATTTACTCCACACTC +
Preference number: 4 (lower is better)
Translates to: SSCELQDGECCVGFRGLESSNLG*TIYSTL
Trigger: GAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACT...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAAAAAATCAGAAGCAATaGAAACCCTTCAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: AEVGKTGPNQTGRREAGTKNQKQ*KPFKPA
Trigger: GGCTGGTTTGAAGGGTTTGCATTGCTTCTGATTTTT...TGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTCTCTGATCAGAATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGGTGCTTGGAGGGGAGTaGAATCTCAGTAGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: FSDQNLLSDQSRPPNHSRVLGGE*NLSRVD
Trigger: ATCAACTCTACTGAGATTCCACTCCCCTCCAAGCAC...CCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTGATCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCAGCCTCTCCAGTATGGTaGCTTCAGGGTAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: QPNISFAHESADWADCFSASPVW*LQGSQL
Trigger: TAATTGGCTACCCTGAAGCCACCATACTGGAGAGGC...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMIKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGCTTTTCAGAGCAAATaGCATTCGTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: AFQSKWHSLASKAASGPSAFQSK*HSLASK
Trigger: CTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC...AGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATACAGAAACCCATCATATaGGGCAATGAGAAAAATCAG +
Preference number: 4 (lower is better)
Translates to: SPQRGCMGGREAPRAIMIQKPII*GNEKNQ
Trigger: CTGATTTTTCTCATTGCCCCATATGATGGGTTTCTG...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTCTTCAACATTCTAGCTaGTGCCTAGCGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFLQHSS*CLAFVQ
Trigger: CTGTACAAACGCTAGGCATCAGCTAGAATGTTGAAG...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR TCA 90 bp GCATGGTACGCTCTGCTTACATCCTCTCCTCTGTTTGGAGAGAGACATGTAAACTTACCTAACCAGGGTTaGGAACATTCAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AWYALLTSSPLFGERHVNLPNQG*EHSREE
Trigger: CTCTTCCCTTGAATGTTCTCAACCCTGGTTAGGTAA...GTTTACATGTCTCTCTCCAAACAGAGGAGAGGATGTAAGCAGAGCGTACCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp GTAGCACATCATGTTACTCTATACGAAAGCACAGATTTAGGCACTTTATCAAAGCATCCGGTGTGCAGTTaGCTGAGACCACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: VAHHVTLYESTDLGTLSKHPVCS*LRPLPP
Trigger: GGGTGGGAGTGGTCTCAGGCAACTGCACACCGGATG...CTTTGATAAAGTGCCTAAATCTGTGCTTTCGTATAGAGTAACATGATGTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGCAGGAGACTCATCATTaGTTTTCAGAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEQETHH*FSEQMA
Trigger: TGCCATTTGCTCTGAAAAGCAATGATGAGTCTCCTG...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AATGAAATCCCAGGGGATGCCAAATGGAGCTGGTCTCTAGAACCTTCAGGATCTAACAGCCAAGCCACTTaGTTAAGGTTAGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: NEIPGDAKWSWSLEPSGSNSQAT*LRLGLG
Trigger: TCCAAGTCCTAACCTTAAGCAAGTGGCTTGGCTGTT...AGATCCTGAAGGTTCTAGAGACCAGCTCCATTTGGCATCCCCTGGGATTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGAATGATCATTGTGGTTaGTATTCAATGTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAENDHCG*YSMFSL
Trigger: AAGGCTGAACATTGAATAGCAACCACAATGATCATT...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATCTGATTCAGGAAGTCTaGAATGGAGGAATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: EDIIHMAGHVQNLLRPPHLIQEV*NGGILW
Trigger: CCACAGAATTCCTCCATTGCAGACTTCCTGAATCAG...ATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR GCA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCGTATACATGATCACCTaGAGATCTTGTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPVYMIT*RSCKNA
Trigger: TGCATTTTTACAAGATCTGCAGGTGATCATGTATAC...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGTTGCCGGGGTACACCTaGCCCTCCAGAGTTACATCA +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLLPGYT*PSRVTS
Trigger: TGATGTAACTCTGGAGGGCCAGGTGTACCCCGGCAA...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGATTGCCGGGGTACACCTaGCCCTCCAGAGTTACATCA +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGLPGYT*PSRVTS
Trigger: TGATGTAACTCTGGAGGGCCAGGTGTACCCCGGCAA...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAGCTCGATTTTCTTCCTTaGAAGACCGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WEKQVQIKLADERQAQVELDFLP*KTEISD
Trigger: ATCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAG...CTCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TTCTCTGATCAGAATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTATACTGGGCCATTATaGCTATGCAGGACAGTAACC +
Preference number: 4 (lower is better)
Translates to: FSDQNLLSDQSRPPNHSRYTGPL*LCRTVT
Trigger: GGTTACTGTCCTGCATAGCCATAATGGCCCAGTATA...CCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTGATCAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACCTGGTTTTCTTAACCTaGTCAGGGAAGATTCTACCT +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADLVFLT*SGKILP
Trigger: AGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAG...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp ACCAGGGTTGAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGTGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: TRVENIQGKRYISKSYCVCCLPR*AEYRRG
Trigger: TCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA...CACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTCAACCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGACCCAGAGAACCTACATaGCTTGTCCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGPREPT*LVQGQA
Trigger: TGCCTGGCCTTGGACAAGCCATGTAGGTTCTCTGGG...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATTCCTGCTATTCAGACTaGCCAGGGGTCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDSCYSD*PGVLHL
Trigger: AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGA...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATGAGAAGGCAAATGCCTaGCATGGAGGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDEKANA*HGGCCH
Trigger: ATGACAGCACCCTCCATGCCAGGCATTTGCCTTCTC...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGCTCAGTAGGGCTTCCTaGTACAGTGACAAACATCAT +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLLSRAS*YSDKHH
Trigger: ATGATGTTTGTCACTGTATCAGGAAGCCCTACTGAG...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACATATGCTTTCAGGCTTaGTTGGGTCTATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HCTQPNISFAHESADWADICFQA*LGLSLR
Trigger: TCTCAAAGATAGACCCAAGCAAGCCTGAAAGCATAT...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATACATCAGCAGGGACTATaGAGTGAAACAGTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSIHQQGL*SETVVQ
Trigger: TTGAACCACTGTTTCACTGCATAGTCCCTGCTGATG...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTGGCTGGGAAGACTCATaGAGCTGGGGTTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSGWEDS*SWGWSR
Trigger: CCTGCTCCAACCCCAGCTGCATGAGTCTTCCCAGCC...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCGATCTTGTAGATCAATaGCATCATTTGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: HSYGWPCPELAASSTFLSDLVDQ*HHLMDG
Trigger: CCCATCCATCAAATGATGGCATTGATCTACAAGATC...GCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCGATCTTGTAGATCAATaGCATCATTTGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIDLVDQ*HHLMDG
Trigger: CCCATCCATCAAATGATGGCATTGATCTACAAGATC...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTAAGGTCTCTTGTGCTCTaGAAGATCTCCTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLRSLVL*KISFFN
Trigger: ATTGAAGAAGGAGATCTTCCAGAGCACAAGAGACCT...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAAACAGCTGCTTTATACTaGGCCATTATGGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKTAALY*AIMAMQ
Trigger: CTGCATAGCCATAATGGCCCAGTATAAAGCAGCTGT...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTACTTGGGAGGGCAATTTaGCAATACACACCAAAATGT +
Preference number: 4 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLLGRAI*QYTPKC
Trigger: ACATTTTGGTGTGTATTGCCAAATTGCCCTCCCAAG...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGCCACATGTCTGTGCCTaGGCTGGGAAGACTCATGCA +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKPHVCA*AGKTHA
Trigger: TGCATGAGTCTTCCCAGCCCAGGCACAGACATGTGG...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: QTRLTRAWGLRWEKQVQIKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...GATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTTTTACTCCACACTCTTaGTCAAATTTCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: AFQSKWHSLASKAASGPSFTPHS*SNFFTS
Trigger: AGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTAAA...AGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp ACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATTTTACTCCACACTCTTaGTCAAATTTCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: TVCPISCCAWLPCLQQSHFTPHS*SNFFTS
Trigger: AGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTAAA...ATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGGGGGTCAAGTGTAAATaGGAAAAAGCAACACAGTCA +
Preference number: 4 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRGVKCK*EKATQS
Trigger: TGACTGTGTTGCTTTTTCCCATTTACACTTGACCCC...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CAA 72 bp TCAGCTTATGTTGGCTCCCCTCAGTGTCAACTAGGATaGCTTGAAGGCTGGGGCTGGAAATGTTTAAATCTT +
Preference number: 4 (lower is better)
Translates to: SAYVGSPQCQLG*LEGWGWKCLNL
Trigger: AAGATTTAAACATTTCCAGCCCCAGCCTTCAAGCAATCCTAGTTGACACTGAGGGGAGCCAACATAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGCCCATCAAACTGCCCTaGGTACAACAGAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLPIKLP*VQQKKP
Trigger: GGGCTTTTTCTGTTGTACTCAGGGCAGTTTGATGGG...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGCAGATCTGCACATTCTaGCATGGGAAGGCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLQICTF*HGKAPK
Trigger: CTTAGGAGCCTTCCCATGTCAGAATGTGCAGATCTG...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR TCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGTCAACTAGGATTGCTTaGAGGCTGGGGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLSTRIA*RLGLEM
Trigger: CATTTCCAGCCCCAGCCTTCAAGCAATCCTAGTTGA...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp GAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATATATGCTTTCAGGCTTaGTTGGGTCTATCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EDIIHMAGHVQNLLRPPHICFQA*LGLSLR
Trigger: TCTCAAAGATAGACCCAAGCAAGCCTGAAAGCATAT...ATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGTCGTCATTTTCAATATaGTTTCAGGCTTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLSSFSI*FQACLG
Trigger: ACCCAAGCAAGCCTGAAAGCATATTGAAAATGACGA...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTTCAGGGACTCGTTTATaGCACCAGGGTGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSSGTRL*HQGVAL
Trigger: GAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGA...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TTCCTGCATAGATTTTGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGGTAACCCCATCAAACTaGCCTGAGTACAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLHRFWIYTPWLPGYRHLVTPSN*PEYNRK
Trigger: TTTTCTGTTGTACTCAGGGCAGTTTGATGGGGTTAC...CAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTGTTTCTCATCAGACTGTTTCCTCTaGCTGCCTTACTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: QPNISFAHESADWADCFSSDCFL*LPYSIS
Trigger: AGAAATAGAGTAAGGCAGGCAGAGGAAACAGTCTGA...TGAGAAACAGTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp ACTCATCATTGCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: THHCFSEQMAFVGFKGSFMSRTC*VLHISK
Trigger: CTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACAT...GAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGCAATGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATATGTCCAGAACTTGCTaGGTCCTCCACATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNMSRTC*VLHISK
Trigger: CTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACAT...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GTTCAAAGAAAGAGAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTAAATCTTCCAAGTTGTaGCCATCCCTTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VQRKRRYHSYGWPCPELAKSSKL*PSLALP
Trigger: GGGCAAGGCAAGGGATGGGCACAACTTGGAAGATTT...AGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGAAAATCTTCCAAGTTGTaGCCATCCCTTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGKSSKL*PSLALP
Trigger: GGGCAAGGCAAGGGATGGGCACAACTTGGAAGATTT...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATGATCTTGTAGATCAATaGCATCATTTGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: EDIIHMAGHVQNLLRPPHDLVDQ*HHLMDG
Trigger: CCCATCCATCAAATGATGGCATTGATCTACAAGATC...ATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATATCACAAAAACTAGGTaGAGGGAGAGTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNITKTR*RESPQR
Trigger: TCTCTGAGGACTCTCCCTGCACCTAGTTTTTGTGAT...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCAGTTTGTACAGTCCTTTaGAGCTTGCAAAACTCTTAT +
Preference number: 4 (lower is better)
Translates to: RWRVLCGFQGFRVLIWGAVCTVL*SLQNSY
Trigger: ATAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAAC...TGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTCCTGTTTACCACCCCTaGACTGCAGCAAATTTATTA +
Preference number: 4 (lower is better)
Translates to: KISFIWLAMSRTCCVLHIPVYHP*TAANLL
Trigger: TAATAAATTTGCTGCAGTGCAGGGGTGGTAAACAGG...AATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGCTCGATTTTCTTCCTTaGAAGACCGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLLDFLP*KTEISD
Trigger: ATCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAG...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GCTGCTTTATACTGGGCCATTATGGCTATGCAGGACAGTAACCCCATCAAACTGTTCCTGCATAGATTTTaGATTTACACACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AALYWAIMAMQDSNPIKLFLHRF*IYTPWL
Trigger: AAGCCAGGGTGTGTAAATCCAAAATCTATGCAGGAA...CAGTTTGATGGGGTTACTGTCCTGCATAGCCATAATGGCCCAGTATAAAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGGCAGGGAGGGGGATGTaGGGGCACAAATTGTTAACA +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKAGRGM*GHKLLT
Trigger: TGTTAACAATTTGTGCCCCCACATCCCCCTCCCTGC...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATATATGCAGTGAAACAGTaGTTCAAACCTCACCATCAC +
Preference number: 4 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSIYAVKQ*FKPHHH
Trigger: GTGATGGTGAGGTTTGAACCACTGTTTCACTGCATA...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTAAGATATCATTCATATaGCTGGCCATGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFKISFI*LAMSRT
Trigger: AGTTCTGGACATGGCCAGCCATATGAATGATATCTT...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATAAGAGCAGGTGGAGATaGTTCAAAGAAAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: EDIIHMAGHVQNLLRPPHKSRWR*FKERED
Trigger: ATCTTCTCTTTCTTTGAACCATCTCCACCTGCTCTT...ATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTAAGAGCAGGTGGAGATaGTTCAAAGAAAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFKSRWR*FKERED
Trigger: ATCTTCTCTTTCTTTGAACCATCTCCACCTGCTCTT...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCAGCAAATGGCATTCGTTaGCTTCAAAGGCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPANGIR*LQRQLP
Trigger: CGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGC...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GTTCAAAGAAAGAGAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTTGTTGCCTGCCAAGATaGGCTGAGTATAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: VQRKRRYHSYGWPCPELACCLPR*AEYRRG
Trigger: TCCACGTCTATACTCAGCCCATCTTGGCAGGCAACA...AGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACTTAAGGTTAGGACTTaGATCCTAATCTTCCTAACT +
Preference number: 4 (lower is better)
Translates to: RWRVLCGFQGFRVLIWGALKVRT*ILIFLT
Trigger: AGTTAGGAAGATTAGGATCCAAGTCCTAACCTTAAG...TGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AAGTGGCCCTTTATTCAACAAAAGTATCATAAGAAAAGTGGCTTAGTCTCACCCTCCTGCTATTCAGACTaGCCAGGGGTCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: KWPFIQQKYHKKSGLVSPSCYSD*PGVLHL
Trigger: AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGA...GGGTGAGACTAAGCCACTTTTCTTATGATACTTTTGTTGAATAAAGGGCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGAGGCAAATGCCTGGCATaGAGGGTGCTGTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGGKCLA*RVLSSF
Trigger: AAAAGATGACAGCACCCTCCATGCCAGGCATTTGCC...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp GGAAGGAGATCTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGGAAGTCTGCAATaGAGGAATTCTGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: GRRSCRSMPSFDGWEHWASGSLQ*RNSVVL
Trigger: TAGAACCACAGAATTCCTCCATTGCAGACTTCCTGA...AGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGTCCAAAGCAGAGAACTaGGAATGCAGAGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKSKAEN*ECRGCG
Trigger: ACCACACCCTCTGCATTCTCAGTTCTCTGCTTTGGA...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TTCTCTGATCAGAATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGTCTCATCAAAACAGCTaGTTTATACTGGGCCATTAT +
Preference number: 4 (lower is better)
Translates to: FSDQNLLSDQSRPPNHSRSHQNS*FILGHY
Trigger: ATAATGGCCCAGTATAAAGCAGCTGTTTTGATGAGA...CCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTGATCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTCAGTGCAACCTGGACTaGCTTTCACACCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSQCNLD*LSHPPH
Trigger: ATGGGGTGGGTGTGAAAGGCAGTCCAGGTTGCACTG...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTTCATCCAGGCTGGAGTaGAGTGGCCTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSSSRLE*SGLILA
Trigger: AGCCAAGATCAGGCCACTGCACTCCAGCCTGGATGA...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTACGGCTCACACCTGCTaGGGTCCTCTTCTGATCACT +
Preference number: 4 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSTAHTC*GPLLIT
Trigger: AGTGATCAGAAGAGGACCCCAGCAGGTGTGAGCCGT...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATGGGGTCAAGTGTAAATaGGAAAAAGCAACACAGTCA +
Preference number: 4 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNGVKCK*EKATQS
Trigger: TGACTGTGTTGCTTTTTCCCATTTACACTTGACCCC...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp GAGAACATTCAAGGGAAGAGATACATATCGAAGTCCTACTGTGTGCCGAGCCCTCATTTGCTTGGAAAGTaGCCCTTTATTCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: ENIQGKRYISKSYCVPSPHLLGK*PFIQQK
Trigger: CTTTTGTTGAATAAAGGGCCACTTTCCAAGCAAATG...AGGGCTCGGCACACAGTAGGACTTCGATATGTATCTCTTCCCTTGAATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp GTTCAAAGAAAGAGAAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTCAACTAGTGGTCTACTaGAATGGATGGGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: VQRKRRYHSYGWPCPELAQLVVY*NGWARC
Trigger: GCATCTTGCCCATCCATTCCAGTAGACCACTAGTTG...AGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTTCTCTTTCTTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
3UTR CAA 72 bp GAGAAGTATCCTTTCCAGCCCAGTCCTGAAATCATTTaGGAGCCTCTGTCTTTTAAATTAAGATCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: EKYPFQPSPEII*EPLSFKLRSRL
Trigger: CAACCGGGATCTTAATTTAAAAGACAGAGGCTCCAAAATGATTTCAGGACTGGGCTGGAAAGGATACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp TTCTCTGATCAGAATTTGCTATCTGATCAGAGCAGGCCACCCAATCACAGCAGGATTCTCCGCATTTCCTaGATAGATTTTGGATTTACA +
Preference number: 4 (lower is better)
Translates to: FSDQNLLSDQSRPPNHSRILRIS*IDFGFT
Trigger: TGTAAATCCAAAATCTATGCAGGAAATGCGGAGAAT...CCTGCTGTGATTGGGTGGCCTGCTCTGATCAGATAGCAAATTCTGATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGACTGTTTCCTCTGCCTaGCTTACTCTATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLTVSSA*LTLFLL
Trigger: GAGGAGAAATAGAGTAAGGCAGGCAGAGGAAACAGT...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp TACTCCACACTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGGAGACTCATCATTaGTTTTCAGAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: YSTLLVKFLHLSELFLEPQETHH*FSEQMA
Trigger: TGCCATTTGCTCTGAAAAGCAATGATGAGTCTCCTG...TGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATCAGGAGACTCATCATTaGTTTTCAGAGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDQETHH*FSEQMA
Trigger: TGCCATTTGCTCTGAAAAGCAATGATGAGTCTCCTG...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGAATCACAAAAACTAGGTaGAGGGAGAGTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGITKTR*RESPQR
Trigger: TCTCTGAGGACTCTCCCTGCACCTAGTTTTTGTGAT...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR GCA 90 bp GGAAGGAGATCTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTAATGATCATTGTGGTTaGTATTCAATGTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRRSCRSMPSFDGWEHWANDHCG*YSMFSL
Trigger: AAGGCTGAACATTGAATAGCAACCACAATGATCATT...AGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TACTCCACACTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACTCGATTTTCTTCCTTaGAAGACCGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: YSTLLVKFLHLSELFLEPLDFLP*KTEISD
Trigger: ATCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAG...TGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAGTGTGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGGGATTGCTTGAAGGCTaGGGCTGGAAATGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: YPAPFILLTAAILLCTLLGLLEG*GWKCLN
Trigger: ATTTAAACATTTCCAGCCCCAGCCTTCAAGCAATCC...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGATCCCTCTGGTCTAATTaGTTTCTTCTCACACAGTTC +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGSLWSN*FLLTQF
Trigger: GAACTGTGTGAGAAGAAACCAATTAGACCAGAGGGA...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR TCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGTACTTTGTACATTACTaGCATTTGTCTTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKYFVHY*HLSSPT
Trigger: GGTGGGGGAAGACAAATGTCAGTAATGTACAAAGTA...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR GCA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATGTTTGTACAGTCCTTTaGAGCTTGCAAAACTCTTAT +
Preference number: 4 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDVCTVL*SLQNSY
Trigger: ATAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAAC...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
3UTR CAA 72 bp GTTTGTACAGTCCTTTGCAGCTTGCAAAACTCTTATTaGTTCCAGAAAACTAAAGCCCAGAGAACCTACATG +
Preference number: 4 (lower is better)
Translates to: VCTVLCSLQNSY*FQKTKAQRTYM
Trigger: CATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGCTTGAAGGCTGGGGCTaGAAATGTTTAAATCTTATC +
Preference number: 4 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKLEGWG*KCLNLI
Trigger: GATAAGATTTAAACATTTCCAGCCCCAGCCTTCAAG...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261758.6
3UTR CAA 72 bp TTTACCACCCCTGCACTGCAGCAAATTTATTATAACTaGCCACCAGCCACTGAAAGAAAATTGCTATATTTG +
Preference number: 4 (lower is better)
Translates to: FTTPALQQIYYN*PPATERKLLYL
Trigger: CAAATATAGCAATTTTCTTTCAGTGGCTGGTGGCAAGTTATAATAAATTTGCTGCAGTGCAGGGGTGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CCA 90 bp GTAGCACATCATGTTACTCTATACGAAAGCACAGATTTAGGCACTTTATCAAAGCTCACCAAGTGTAAATaGGAAAAAGCAACACAGTCA +
Preference number: 4 (lower is better)
Translates to: VAHHVTLYESTDLGTLSKLTKCK*EKATQS
Trigger: TGACTGTGTTGCTTTTTCCCATTTACACTTGGTGAG...CTTTGATAAAGTGCCTAAATCTGTGCTTTCGTATAGAGTAACATGATGTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CCA 90 bp AATCTTCCTAACTCAAAGCTGGGCTTCTTAGTTATACACCATCCTCACTATGGAACACCATCCTCACTATaGAAAACATCAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: NLPNSKLGFLVIHHPHYGTPSSL*KTSKSE
Trigger: TTCTGATTTTGATGTTTTCCATAGTGAGGATGGTGT...TCCATAGTGAGGATGGTGTATAACTAAGAAGCCCAGCTTTGAGTTAGGAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CCA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCAACACCATCCTCACTATaGAAAACATCAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPTPSSL*KTSKSE
Trigger: TTCTGATTTTGATGTTTTCCATAGTGAGGATGGTGT...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCCAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGCCTCCCAGGCCCTGTTaGGCTGGAGGCCAAACACGT +
Preference number: 5 (lower is better)
Translates to: PRPCLAGGQTRLTRAWGLPPRPC*AGGQTR
Trigger: ACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG...CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TCAGGTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SGETLPAPYKHMSGTISSCPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...GCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SLTVCPISCCAWLPCLQQSRTTA*RAHLEA
Trigger: GGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCT...TTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGGGCCATGTCCAGAACTaGCTGCGTCCTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: PIPCLAPRRGVHKSRWRWGHVQN*LRPPHF
Trigger: GAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCC...CCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGAAAGAGAAGTGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PQGGVSIRAGGDGSKKEKCPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...CTTCTCTTTCTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTAGTTGTGCCCATCCCTaGCCTTGCCCCAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: FLLCMAPLSTTKPSPCLGSCAHP*PCPKAG
Trigger: CCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACT...ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SSCELQDGECCVGFRGLESRTTA*RAHLEA
Trigger: GGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCT...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: FDKSMGAEVGKTGPNQTGSRTTA*RAHLEA
Trigger: GGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCT...GCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GCATGTTGCCTGCCAAGATGGGCTGAGTATAGACGTGGATTCCCATGCCCCTCGTCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 5 (lower is better)
Translates to: ACCLPRWAEYRRGFPCPSSSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...CGAGGGGCATGGGAATCCACGTCTATACTCAGCCCATCTTGGCAGGCAACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGTCTCCTCTCCTCCTCTaGCCCTCAGAGAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQSPLLL*PSEKAS
Trigger: AGAGGCCTTCTCTGAGGGCAAGAGGAGGAGAGGAGA...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp GCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAAGTTGTGCCCATCCCTaGCCTTGCCCCAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: AEVGKTGPNQTGRREAGTSCAHP*PCPKAG
Trigger: CCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACT...TGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGATCATCTTTCTCCCATaGCTCCAGAAGACGCGCCAT +
Preference number: 5 (lower is better)
Translates to: PIPCLAPRRGVHKSRWRWIIFLP*LQKTRH
Trigger: ATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGAT...CCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACCTCAGGGGTCTCCCATaGCTCCAGAAGACGCGCCAT +
Preference number: 5 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNLRGLP*LQKTRH
Trigger: ATGGCGCGTCTTCTGGAGCAATGGGAGACCCCTGAG...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422879.3
CDS-3UTR CAA 90 bp AGCTCAAAGGTAGGCAGGTTCCTAGGAGGTCTCCTCCCTTACAGTTTGCCCCATCCTCCCAGGCCCTGTTaGGCTGGAGGCCAAACACGT +
Preference number: 5 (lower is better)
Translates to: SSKVGRFLGGLLPYSLPHPPRPC*AGGQTR
Trigger: ACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG...ATGGGGCAAACTGTAAGGGAGGAGACCTCCTAGGAACCTGCCTACCTTTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGTCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 5 (lower is better)
Translates to: SMGAEVGKTGPNQTGRRESSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCAGGGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGATTTCTCCCAGCTATTaGGGAGGCTGTGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PGRPKLLPNSMCYAPPTWISPSY*GGCGGK
Trigger: CTTCCCACCACAGCCTCCCAAATAGCTGGGAGAAAT...CCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCAGTTGTGCCCATCCCTaGCCTTGCCCCAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: HSYGWPCPELAASSTFLSSCAHP*PCPKAG
Trigger: CCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACT...GCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTGTTGGCCTCCCATaGCTCCAGAAGACGCGCCAT +
Preference number: 5 (lower is better)
Translates to: AEVGKTGPNQTGRREAGTGVGLP*LQKTRH
Trigger: ATGGCGCGTCTTCTGGAGCAATGGGAGGCCAACACC...TGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR CAA 90 bp GAGAAGGCTGTGGGCACCAACTGTGGCCAGATGTGTGGGAGGGAGCTCAGGATGGGATGGTTTTATGATTaGACAGATGCTCCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: EKAVGTNCGQMCGRELRMGWFYD*TDAPLR
Trigger: GCGGAGGGGAGCATCTGTCAAATCATAAAACCATCC...CATCCTGAGCTCCCTCCCACACATCTGGCCACAGTTGGTGCCCACAGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNSRTTA*RAHLEA
Trigger: GGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCT...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTATCATCTTTCTCCCATaGCTCCAGAAGACGCGCCAT +
Preference number: 5 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPIIFLP*LQKTRH
Trigger: ATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGAT...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGATCATCTTTCTCCCATaGCTCCAGAAGACGCGCCAT +
Preference number: 5 (lower is better)
Translates to: QALFGWRPNTFDKSMGAEIIFLP*LQKTRH
Trigger: ATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGAT...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACTTGCTTCCTCCTCCTTaGCCGGGGTACACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: HCTQPNISFAHESADWADLLPPP*PGYTWP
Trigger: GGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCAA...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CCTCAGAGAAGGCCTCTGGTTTTCTTAACCTGGTCAGGGAAGATTCTACCTCCCTGCAGTGGCCTGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: PQRRPLVFLTWSGKILPPCSGLI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCAGGCCACTGCA...GGGAGGTAGAATCTTCCCTGACCAGGTTAAGAAAACCAGAGGCCTTCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATAGAGTGGGGAAGGAGCCTCCCAGGCCCTGTTaGGCTGGAGGCCAAACACGT +
Preference number: 5 (lower is better)
Translates to: LHLSELFLEPQSDRVGKEPPRPC*AGGQTR
Trigger: ACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG...CTCCTTCCCCACTCTATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AAGATATCATTCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTGCCCATCCCTTGCCTaGCCCCAAGGCGGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KISFIWLAMSRTCCVLHICPSLA*PQGGVS
Trigger: GGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCA...AATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGAATGATATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCATCAGCACACCTGTCTaGACCGACCAAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: FQVVPIPCLAPRRGVHKSISTPV*TDQKVL
Trigger: AAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGAT...GCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp ACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAATTGCTTCCTCCTCCTTaGCCGGGGTACACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TRLTRAWGLRWEKQVQIKLLPPP*PGYTWP
Trigger: GGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCAA...TTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTTTGCTTCCTCCTCCTTaGCCGGGGTACACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFLLPPP*PGYTWP
Trigger: GGGCCAGGTGTACCCCGGCAAAGGAGGAGGAAGCAA...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GGCGTCCCAAACTCCTACCAAACTCCATGTGCTACGCTCCTCCAACCTGGGCCTATGTGGGGGCACAAATaGTTAACAGCAGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: GVPNSYQTPCATLLQPGPMWGHK*LTAAST
Trigger: AGTGGAAGCTGCTGTTAACAATTTGTGCCCCCACAT...AGGCCCAGGTTGGAGGAGCGTAGCACATGGAGTTTGGTAGGAGTTTGGGACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CACTGTACCCAGCCCAACATTTCTTTTGCTCATGAATCTGCAGACTGGGCAGACGCCCACAGACAGGGCTaGGTTCAGCCACGGCATGAT +
Preference number: 5 (lower is better)
Translates to: HCTQPNISFAHESADWADAHRQG*VQPRHD
Trigger: ATCATGCCGTGGCTGAACCAAGCCCTGTCTGTGGGC...GTCTGCCCAGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCTGGGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp TTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FSEQMAFVGFKGSFRPIWGGQTR*TRAWGL
Trigger: CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCC...CCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CAGGAGGGACATGTCAGCATGACACCCATTATCATCACAAAAACTAGGTGCAGGCCTCCCAGGCCCTGTTaGGCTGGAGGCCAAACACGT +
Preference number: 5 (lower is better)
Translates to: QEGHVSMTPIIITKTRCRPPRPC*AGGQTR
Trigger: ACGTGTTTGGCCTCCAGCCAAACAGGGCCTGGGAGG...CCTGCACCTAGTTTTTGTGATGATAATGGGTGTCATGCTGACATGTCCCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AGTCCTCAGAGAGGCTGTATGGGCGGCAGAGAAGCTCCACGGGCAATAATGATAGGCCATGTCCAGAACTaGCTGCGTCCTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: SPQRGCMGGREAPRAIMIGHVQN*LRPPHF
Trigger: GAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCC...TATCATTATTGCCCGTGGAGCTTCTCTGCCGCCCATACAGCCTCTCTGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGGATCAATGCCATCATTaGATGGATGGGAACACTGGG +
Preference number: 5 (lower is better)
Translates to: GGLLPYSLPHFLLCMAPLDQCHH*MDGNTG
Trigger: CCCAGTGTTCCCATCCATCAAATGATGGCATTGATC...CAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGAAGTAGGACAGGTGTaGGCCTCCCATTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SMGAEVGKTGPNQTGRREEVGQV*ASHCSR
Trigger: TCTGGAGCAATGGGAGGCCAACACCTGTCCTACTTC...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559537.1
CDS-3UTR CAA 90 bp GGAGGTCTCCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGGACAGGGGTCTCAAGTaGAAAGGTAAGGGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GGLLPYSLPHFLLCMAPLDRGLK*KGKGLN
Trigger: GTTCAAACCCTTACCTTTCAACTTGAGACCCCTGTC...CAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGGAGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp TTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCCCAAAATCTTCCAAGTaGTGCCCATCCCTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LPHFLLCMAPLSTTKPSPPKSSK*CPSLAL
Trigger: CAAGGCAAGGGATGGGCACAACTTGGAAGATTTTGG...GGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CTCACCCTCCTACCCAATTCCTGCTATTCAGACTGGCCAGGGGTCCTGCATCTTCCAAAATCTTCCAAGTaGTGCCCATCCCTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LTLLPNSCYSDWPGVLHLPKSSK*CPSLAL
Trigger: CAAGGCAAGGGATGGGCACAACTTGGAAGATTTTGG...AAGATGCAGGACCCCTGGCCAGTCTGAATAGCAGGAATTGGGTAGGAGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGCCTCTCATAGGGCTTTaGCTCAGGAGACTCATCATT +
Preference number: 5 (lower is better)
Translates to: LALPQGGVSIRAGGDGSKPLIGL*LRRLII
Trigger: AATGATGAGTCTCCTGAGCAAAAGCCCTATGAGAGG...CTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGAAATTAAGATCCCGGTaGCCAAAAGCTGATGTATGT +
Preference number: 5 (lower is better)
Translates to: PIPCLAPRRGVHKSRWRWKLRSR*PKADVC
Trigger: ACATACATCAGCTTTTGGCAACCGGGATCTTAATTT...CCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAACCCACTTTCTCCAGTTaGCTCTCTCCCTCTGGTCTA +
Preference number: 5 (lower is better)
Translates to: FGWRPNTFDKSMGAEVGKPTFSS*LSPSGL
Trigger: TAGACCAGAGGGAGAGAGCAAACTGGAGAAAGTGGG...TTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKSRTTA*RAHLEA
Trigger: GGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCT...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp TGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTCAGGAGGCTTGCTTGGGTCTATCTTaGAGAAGTCGACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: WPCPELAASSTFLSCQEACLGLS*RSRQVL
Trigger: CAGCACCTGTCGACTTCTCAAAGATAGACCCAAGCA...AGCCTCCTGACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGAGCAGGTGGAGATGGTTCAAAGGCTCGATTTTCTTCCTaGGAAGACCGAGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: LALPQGGVSIRAGGDGSKARFSS*EDRDFR
Trigger: TCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAGC...CTTTGAACCATCTCCACCTGCTCTTATGGACACCCCGCCTTGGGGCAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAATCATCCGGTGTGCAGTaGCCTGAGACCACTCCCACC +
Preference number: 5 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKSSGVQ*PETTPT
Trigger: GGTGGGAGTGGTCTCAGGCAACTGCACACCGGATGA...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGAGCCCAACATTTCTTTaGCTCATGAATCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQSPTFL*LMNLQT
Trigger: AGTCTGCAGATTCATGAGCAAAAGAAATGTTGGGCT...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp AGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTTCTAATCTGGGGTGCACCATTTGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RVLCGFQGFRVLIWGAPFGGQTR*TRAWGL
Trigger: CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCC...AAATGGTGCACCCCAGATTAGAACTCTAAACCCCTGAAACCCACACAGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp ACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAAGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRLTRAWGLRWEKQVQIKGGQTR*TRAWGL
Trigger: CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCC...TTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGCCTCTCATAGGGCTTTaGCTCAGGAGACTCATCATT +
Preference number: 5 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAEPLIGL*LRRLII
Trigger: AATGATGAGTCTCCTGAGCAAAAGCCCTATGAGAGG...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CAGGCCCTGTTTGGCTGGAGGCCAAACACGTTTGACAAGAGCATGGGGGCTGAGCGTTTGTACAGTCCTTaGCAGCTTGCAAAACTCTTA +
Preference number: 5 (lower is better)
Translates to: QALFGWRPNTFDKSMGAERLYSP*QLAKLL
Trigger: TAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAACG...CTCAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCCAGCCAAACAGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTTGCTTTCAGGCTTGCTaGGGTCTATCTTTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: FLLCMAPLSTTKPSPCLGCFQAC*GLSLRS
Trigger: ACTTCTCAAAGATAGACCCAAGCAAGCCTGAAAGCA...ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCGCTCGATTTTCTTCCTaGGAAGACCGAGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: HPADVGHLQLWPALLKHLARFSS*EDRDFR
Trigger: TCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAGC...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGATCAATGCCATCATTaGATGGATGGGAACACTGGG +
Preference number: 5 (lower is better)
Translates to: SMGAEVGKTGPNQTGRREDQCHH*MDGNTG
Trigger: CCCAGTGTTCCCATCCATCAAATGATGGCATTGATC...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp ATCTTCCAAGTTGTGCCCATCCCTTGCCTTGCCCCAAGGCGGGGTGTCCATAAGCGTTTGTACAGTCCTTaGCAGCTTGCAAAACTCTTA +
Preference number: 5 (lower is better)
Translates to: IFQVVPIPCLAPRRGVHKRLYSP*QLAKLL
Trigger: TAAGAGTTTTGCAAGCTGCAAAGGACTGTACAAACG...CTTATGGACACCCCGCCTTGGGGCAAGGCAAGGGATGGGCACAACTTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CACCCTGCTGATGTAGGACACCTTCAGCTATGGCCTGCACTACTGAAGCACCTCAATATGCTTTCAGGCTaGCTTGGGTCTATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: HPADVGHLQLWPALLKHLNMLSG*LGSIFE
Trigger: CTCAAAGATAGACCCAAGCAAGCCTGAAAGCATATT...GAGGTGCTTCAGTAGTGCAGGCCATAGCTGAAGGTGTCCTACATCAGCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp GTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAGGTAGAATCAGCACACCTGTCTaGACCGACCAAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VGKTGPNQTGRREAGTGRISTPV*TDQKVL
Trigger: AAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGAT...TCTACCTGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GATTCAGGGACTCGTTTATGCCACCAGGGTGTGGCGCTCTCTCCCCACTGTCAGGTGTACCGAAATATTTaGTATGAAAATGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: DSGTRLCHQGVALSPHCQVYRNI*YENVHC
Trigger: GCAGTGGACATTTTCATACAAAATATTTCGGTACAC...CTGACAGTGGGGAGAGAGCGCCACACCCTGGTGGCATAAACGAGTCCCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CTGAACACTCAAGTGTCCATCAGCAGGGACTATGCAGTGAAACAGTGGTTCAAACAGTGTCAACTAGGATaGCTTGAAGGCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LNTQVSISRDYAVKQWFKQCQLG*LEGWGW
Trigger: CCAGCCCCAGCCTTCAAGCAATCCTAGTTGACACTG...TTTGAACCACTGTTTCACTGCATAGTCCCTGCTGATGGACACTTGAGTGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp GGGTTTAGAGTTCTAATCTGGGGTGCACCATTTACTCCACACTCTTGGTCAAATGGAGGCCAAACACGTTaGACAAGAGCATGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GFRVLIWGAPFTPHSWSNGGQTR*TRAWGL
Trigger: CAGCCCCCATGCTCTTGTCAAACGTGTTTGGCCTCC...ATTTGACCAAGAGTGTGGAGTAAATGGTGCACCCCAGATTAGAACTCTAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTTCAGAGAGGGTGCTTGGGTCTATCTTaGAGAAGTCGACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LVDQCHHLMDGNTGLQRGCLGLS*RSRQVL
Trigger: CAGCACCTGTCGACTTCTCAAAGATAGACCCAAGCA...CCCTCTCTGAAGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGGCAGGCACAAATATGCTTTCAGGCTaGCTTGGGTCTATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: AEVGKTGPNQTGRREAGTNMLSG*LGSIFE
Trigger: CTCAAAGATAGACCCAAGCAAGCCTGAAAGCATATT...TGTGCCTGCCTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GTAGCACATCATGTTACTCTATACGAAAGCACAGATTTAGGCACTTTATCAAAGCTCATGCAGCTGGGGTaGGAGCAGGTGGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VAHHVTLYESTDLGTLSKLMQLG*EQVGLL
Trigger: CAGGAGGCCCACCTGCTCCAACCCCAGCTGCATGAG...CTTTGATAAAGTGCCTAAATCTGTGCTTTCGTATAGAGTAACATGATGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp ACTCATCATTGCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCGGCCATGTCCAGAACTaGCTGCGTCCTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: THHCFSEQMAFVGFKGSFGHVQN*LRPPHF
Trigger: GAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCC...GAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGCAATGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTAAATTAAGATCCCGGTaGCCAAAAGCTGATGTATGT +
Preference number: 5 (lower is better)
Translates to: FLLCMAPLSTTKPSPCLGKLRSR*PKADVC
Trigger: ACATACATCAGCTTTTGGCAACCGGGATCTTAATTT...ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GTGAGACCCTGCCTGCCCCATACAAACACATGTCAGGCACCATCAGTAGCTGAGATTCAATGTTCAGCCTaGCACTTTGCACAACATGTT +
Preference number: 5 (lower is better)
Translates to: VRPCLPHTNTCQAPSVAEIQCSA*HFAQHV
Trigger: AACATGTTGTGCAAAGTGCAAGGCTGAACATTGAAT...CTCAGCTACTGATGGTGCCTGACATGTGTTTGTATGGGGCAGGCAGGGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CCTCCCTTACAGTTTGCCCCATTTCCTGCTGTGCATGGCTCCCCTGTCTACAACACAGTCCTTTGCAGCTaGCAAAACTCTTATTTGTTC +
Preference number: 5 (lower is better)
Translates to: PPLQFAPFPAVHGSPVYNTVLCS*QNSYLF
Trigger: GAACAAATAAGAGTTTTGCAAGCTGCAAAGGACTGT...GTTGTAGACAGGGGAGCCATGCACAGCAGGAAATGGGGCAAACTGTAAGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS GCA 90 bp CTATCTACTCCTCCACTGCAGGGCAGGTGTGAGGCTCACATGCAGTaGATAATGGGAAGTGTTGTACTTTCTGACATCAAAAACGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSTPPLQGRCEAHMQ*IMGSVVLSDIKNVF
Trigger: GAACACGTTTTTGATGTCAGAAAGTACAACACTTCCCATTATGCACTGCATGTGAGCCTCACACCTGCCCTGCAGTGGAGGAGTAGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560244.5
CDS-3UTR CAA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTTGCTTTCAGGCTTGCTaGGGTCTATCTTTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: SYGWPCPELAASSTFLSCCFQAC*GLSLRS
Trigger: ACTTCTCAAAGATAGACCCAAGCAAGCCTGAAAGCA...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTCCTGCTGTGCATGGCTCCCCTGTCTACAACAAAGCCATCACCCTGCCTAGGTTTAAGCAGTAATTCTTaGACCACAAACTGGTCATGT +
Preference number: 5 (lower is better)
Translates to: FLLCMAPLSTTKPSPCLGLSSNS*TTNWSC
Trigger: ACATGACCAGTTTGTGGTCAAAGAATTACTGCTTAA...ACCTAGGCAGGGTGATGGCTTTGTTGTAGACAGGGGAGCCATGCACAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTAATATGCTTTCAGGCTaGCTTGGGTCTATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SYGWPCPELAASSTFLSCNMLSG*LGSIFE
Trigger: CTCAAAGATAGACCCAAGCAAGCCTGAAAGCATATT...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TGGATTTACACACCCTGGCTTCCTGGCTACAGACATCTGAGTTCACAAAGCATAATCAGCACACCTGTCTaGACCGACCAAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: WIYTPWLPGYRHLSSQSIISTPV*TDQKVL
Trigger: AAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGAT...TATGCTTTGTGAACTCAGATGTCTGTAGCCAGGAAGCCAGGGTGTGTAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp ACACGTTTGACAAGAGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAAGCTCGATTTTCTTCCTaGGAAGACCGAGATTTCAGA +
Preference number: 5 (lower is better)
Translates to: TRLTRAWGLRWEKQVQIKARFSS*EDRDFR
Trigger: TCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAGC...TTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCTCTTGTCAAACGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp AGCATGGGGGCTGAGGTGGGAAAAACAGGTCCAAATCAAACTGGCAGACGAGAGTTAAGCAGTAATTCTTaGACCACAAACTGGTCATGT +
Preference number: 5 (lower is better)
Translates to: SMGAEVGKTGPNQTGRRELSSNS*TTNWSC
Trigger: ACATGACCAGTTTGTGGTCAAAGAATTACTGCTTAA...CTCTCGTCTGCCAGTTTGATTTGGACCTGTTTTTCCCACCTCAGCCCCCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp GGAAGGAGATCTTGTAGATCAATGCCATCATTTGATGGATGGGAACACTGGGCTGATCAATGCCATCATTaGATGGATGGGAACACTGGG +
Preference number: 5 (lower is better)
Translates to: GRRSCRSMPSFDGWEHWADQCHH*MDGNTG
Trigger: CCCAGTGTTCCCATCCATCAAATGATGGCATTGATC...AGCCCAGTGTTCCCATCCATCAAATGATGGCATTGATCTACAAGATCTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGCCCATCTGGATTCAATGTTCAGCCTaGCACTTTGCACAACATGTT +
Preference number: 5 (lower is better)
Translates to: FSEQMAFVGFKGSFRPIWIQCSA*HFAQHV
Trigger: AACATGTTGTGCAAAGTGCAAGGCTGAACATTGAAT...CCAGATGGGCCGGAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp ACTCATCATTGCTTTTCAGAGCAAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCCTCTCATAGGGCTTTaGCTCAGGAGACTCATCATT +
Preference number: 5 (lower is better)
Translates to: THHCFSEQMAFVGFKGSFPLIGL*LRRLII
Trigger: AATGATGAGTCTCCTGAGCAAAAGCCCTATGAGAGG...GAAGCTGCCTTTGAAGCCAACGAATGCCATTTGCTCTGAAAAGCAATGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTAAATTAAGATCCCGGTaGCCAAAAGCTGATGTATGT +
Preference number: 5 (lower is better)
Translates to: SYGWPCPELAASSTFLSCKLRSR*PKADVC
Trigger: ACATACATCAGCTTTTGGCAACCGGGATCTTAATTT...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp TACCCTGCCCCTTTCATACTTCTAACAGCTGCCATTTTACTTTGTACATTACTGTGCTTGGGTCTATCTTaGAGAAGTCGACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: YPAPFILLTAAILLCTLLCLGLS*RSRQVL
Trigger: CAGCACCTGTCGACTTCTCAAAGATAGACCCAAGCA...CAGTAATGTACAAAGTAAAATGGCAGCTGTTAGAAGTATGAAAGGGGCAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp TCATATGGCTGGCCATGTCCAGAACTTGCTGCGTCCTCCACATTTCTAAGCTGTCAAATTTATTATAACTaGCCACCAGCCACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SYGWPCPELAASSTFLSCQIYYN*PPATER
Trigger: TCTTTCAGTGGCTGGTGGCAAGTTATAATAAATTTG...ACAGCTTAGAAATGTGGAGGACGCAGCAAGTTCTGGACATGGCCAGCCATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp TCAAGCTGTGAACTGCAAGATGGAGAGTGCTGTGTGGGTTTCAGGGGTTTAGAGTCATCTTTTGCTGAGTaGAGAACATGCTTTGTACTA +
Preference number: 5 (lower is better)
Translates to: SSCELQDGECCVGFRGLESSFAE*RTCFVL
Trigger: TAGTACAAAGCATGTTCTCAACTCAGCAAAAGATGA...CTCTAAACCCCTGAAACCCACACAGCACTCTCCATCTTGCAGTTCACAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp AAACAGTGGTTCAAACCTCACCATCACCCTGCTGATGTAGGACACCTTCAGCTATTAAGCAGTAATTCTTaGACCACAAACTGGTCATGT +
Preference number: 5 (lower is better)
Translates to: KQWFKPHHHPADVGHLQLLSSNS*TTNWSC
Trigger: ACATGACCAGTTTGTGGTCAAAGAATTACTGCTTAA...TAGCTGAAGGTGTCCTACATCAGCAGGGTGATGGTGAGGTTTGAACCACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp AAATTAAGGGGAAACAGATGCTGTGAGGCCAAAACAAACATACATCACCATAAGTGCTTTCAGGCTTGCTaGGGTCTATCTTTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: KLRGNRCCEAKTNIHHHKCFQAC*GLSLRS
Trigger: ACTTCTCAAAGATAGACCCAAGCAAGCCTGAAAGCA...CTTATGGTGATGTATGTTTGTTTTGGCCTCACAGCATCTGTTTCCCCTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS-3UTR CAA 90 bp CTCTTGGTCAAATTTCTTCACCTCTCAGAACTCTTTCTAGAGCCACAGAGTGATTATTTGTTGACTCATTaGCTTGGAAAGTGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LLVKFLHLSELFLEPQSDYLLTH*LGKWPF
Trigger: AAAGGGCCACTTTCCAAGCAAATGAGTCAACAAATA...ATCACTCTGTGGCTCTAGAAAGAGTTCTGAGAGGTGAAGAAATTTGACCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619987.4
CDS-3UTR CAA 90 bp AACTCTTATTTGTTCCAGAAAACTAAAGCCCAGAGAACCTACATGGCTTGTCCAACAGTCCTTTGCAGCTaGCAAAACTCTTATTTGTTC +
Preference number: 5 (lower is better)
Translates to: NSYLFQKTKAQRTYMACPTVLCS*QNSYLF
Trigger: GAACAAATAAGAGTTTTGCAAGCTGCAAAGGACTGT...TGGACAAGCCATGTAGGTTCTCTGGGCTTTAGTTTTCTGGAACAAATAAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561312.5
ENST00000619987.4
CDS-3UTR CAA 90 bp CAAGAGAGGGATACACTTTTCACTTTGTACCATTCTTTAACACTGACATTTTCTAAACAAATGAGGTTATaGAGTCGTCTGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: QERDTLFTLYHSLTLTFSKQMRL*SRLSHS
Trigger: AGAGTGTGACAGACGACTCAATAACCTCATTTGTTT...AGAAAATGTCAGTGTTAAAGAATGGTACAAAGTGAAAAGTGTATCCCTCTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261758.6
CDS CCA 72 bp AGGCACAAAGCAGGACCACGGCCTTGCGCGCCCACCTaGAAGCCGCCATTTTCGCTGCGCCGCGCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: RHKAGPRPCAPT*KPPFSLRRAAP
Trigger: GGGCGCTGCGCGGCGCAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261758.6
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS CAA 90 bp AGCAGCAGCAGCAGCAGGTCAGAGGCACAAAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCCGCCATTTTCGCTGCGCCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSSSRSEAQSRTTA*RAHLEAAIFAAPRS
Trigger: GCTGCGCGGCGCAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCTCTGACCTGCTGCTGCTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261758.6
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS GCA 72 bp GCAGCAGGTCAGAGGCACAAAGCAGGACCACGGCCTTaGGCGCCCACCTGGAAGCCGCCATTTTCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: AAGQRHKAGPRP*APTWKPPFSLR
Trigger: GCGCAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCTCTGACCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261758.6
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS CAA 72 bp AGCAGCAGGTCAGAGGCACAAAGCAGGACCACGGCCTaGCGCGCCCACCTGGAAGCCGCCATTTTCGCTGCG +
Preference number: 6 (lower is better)
Translates to: SSRSEAQSRTTA*RAHLEAAIFAA
Trigger: CGCAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCTCTGACCTGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261758.6
ENST00000422879.3
ENST00000561312.5
ENST00000619987.4
CDS CCA 72 bp GTAATCGCGAATATCCTTCTTCTTCTTCCGGGGAGGTaGGGTAGACTCGTCGGGCGTCCCGGGCGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: VIANILLLLPGR*GRLVGRPGRAF
Trigger: GAAGGCTCGCCCGGGACGCCCGACGAGTCTACCCCACCTCCCCGGAAGAAGAAGAAGGATATTCGCGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261758.6
ENST00000422879.3
ENST00000559537.1
ENST00000561312.5
ENST00000619987.4
CDS GCA 72 bp CCTCCACTGCAGGGCAGGTGTGAGGCTCACATGCAGTaGATAATGGGAAGTGTTGTACTTTCTGACATCAAA +
Preference number: 6 (lower is better)
Translates to: PPLQGRCEAHMQ*IMGSVVLSDIK
Trigger: TTTGATGTCAGAAAGTACAACACTTCCCATTATGCACTGCATGTGAGCCTCACACCTGCCCTGCAGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560244.5
CDS TCA 72 bp CGTAATTTCCTCTGTCTCCTTCTCAGTAGGGCTTCCTaGTACAGTGACAAACATCATGAGAGTCTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: RNFLCLLLSRAS*YSDKHHESLPF
Trigger: AAAGGGAAGACTCTCATGATGTTTGTCACTGTATCAGGAAGCCCTACTGAGAAGGAGACAGAGGAAATTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261758.6
ENST00000561312.5
ENST00000619987.4